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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008733

Length: 1,111

Sequence [FASTA format sequence]
TCCCGGGTCT GTAACAGAAA ACGCCAGCGC TCAGCTCCAA CCAGTGCAGA ACCACCCAGC
CCAGAACTCC CAGGACGGGC CACTCTTAGG CTCCTTCCCT CCACCATGGA GTACCTCTCT
GCCCTGAACC CCAGCGGCCT GCTCAGGTCA GTATCCAACA TGAGCTCCGA CTTAGGCCGT
AAGGTCTGGA CCTCCACTCC ACCACCCCAG CGACCTTTCC GTATCTGTGA TCACAAGCGG
ACCACCCGGA AAGGCCTGAC AGCCGCCACC CGCCAGGAAC TGCTAGACAA GGCGCTGGGG
ACTCTGATGC TGAATGGAGT GTTAACACTG GTGCTTGAGG AGGACGGGAC CATGGTGGAG
AGCGAGGACT TCTTCCAGCT GTTGGAGGAT GACACATGCC TGATGGTGCT GGAGTTGGGA
CAGAAATGGA GGCCCAGGAA GAGTGGGGTG CTGTCATATG GCCTGGGCCG GGAGAAGCCC
AAGCACAGCC AGGACATCGC CTGCATCACC TTTGACGTAT ACAAGCAAAA CCCCCGAGAC
CTCTTTGGCA GCCTGAACAT CAAAGCCACA TTCTACGGGC TCTACTCCAT GAGTTGTGAC
ATCCAAGGAC TCGGCCCAAA GAAAATACTC AGGGAGCTCC TCCGATGGGC CTCCGCACTG
CTGCAAGGCC TGGGCCACGT CTTGCTGGGA ATTTCCTCCA CCATTCGTCA TGCAGTGGAA
GGGGCTGAGC AGTGGCAGCA AAAGGGTCAC CTTCACCCCT ACTGAGCAGG AGCTCTGACC
TTCTGCCTCT AGACTCATTC CAAGAGACAG ATTGTGACAA CACCAAGTTT GGGGGCCTTC
AGACAGTGCA GGCTCAGTAA CTCACCTGAT TTCCCCACTG TCCCTCAATC CTATGGGACA
GGCCCCATCA GCATAATGTC CTATACCCCC ACCTTATGCC TCCTGGCCAC CTTTTCAGTC
TCCTGCTCCC TGAAAGACCA CAGCCTGTCC CCGGACACCT GGATCCCACC CTGACTGCTG
CTATACCTAG AGGTCCTTAT GACTCCTCCC GGTCCCTAAC TCCTCTACCT TGAGATCGCT
ATTTCTCTGT ATCCCTCCTC CCCCAAAAAA C


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCIDEBcell death activator CIDE-B [Homo sapiens]. 389e-108O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 isoform 3 [Homo sapiens]. 1594e-39O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 isoform 3 [Homo sapiens]. 1594e-39O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 isoform 1 [Homo sapiens]. 1594e-39O
Contig/Assembly ProteinCIDEAcell death activator CIDE-A isoform 1 [Homo sapiens]. 1533e-37O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 isoform 2 [Homo sapiens]. 1519e-37O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCidebcell death activator CIDE-B [Mus musculus]. 363e-100O
Contig/Assembly ProteinCideccell death activator CIDE-3 [Mus musculus]. 1471e-35O
Contig/Assembly ProteinCideacell death activator CIDE-A [Mus musculus]. 1449e-35O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC608437PREDICTED: similar to Cell death activator CIDE-B (Cell death-inducing DFFA-like effector B) [Canis familiaris]. 389e-108O
Contig/Assembly ProteinLOC492105PREDICTED: similar to Cell death activator CIDE-B (Cell death-inducing DFFA-like effector B) [Canis familiaris]. 388e-108O
Contig/Assembly ProteinLOC607242PREDICTED: similar to Cell death activator CIDE-B (Cell death-inducing DFFA-like effector B) [Canis familiaris]. 2894e-78
Contig/Assembly ProteinLOC484662PREDICTED: similar to Cell death activator CIDE-3 (Cell death-inducing DFFA-like effector protein C) (Fat-specific protein FSP27 homolog) [Canis familiaris]. 1625e-40O
Contig/Assembly ProteinLOC490559PREDICTED: similar to cell death-inducing DNA fragmentation factor, alpha subunit-like effector A [Canis familiaris]. 1519e-37O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCIDEBcell death activator CIDE-B [Bos taurus]. 381e-106O
Contig/Assembly ProteinCIDEAcell death activator CIDE-A [Bos taurus]. 1542e-37O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 [Bos taurus]. 1464e-35O
Contig/Assembly ProteinLOC100336584PREDICTED: cell death-inducing DFFA-like effector a-like [Bos taurus]. 97.42e-20O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCIDE-Bcell-death-inducing DNA-fragmentation-factor-like effector B [Sus scrofa]. 441e-124O
Contig/Assembly ProteinCIDEAcell death activator CIDE-A [Sus scrofa]. 1541e-37O
Contig/Assembly ProteinCIDECcell death activator CIDE-3 [Sus scrofa]. 1524e-37O


Assembly Members: 10      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010044D10AMP01_0044_D10.bBW958105 
ITT010013G10ITT01_0013_G10.bBW977209 
ITT010072F05ITT01_0072_F05.bBW982430 
ITT010096H03ITT01_0096_H03.bBW984573 
KDN010084H04KDN01_0084_H04.bFS677140 
LVR010063G02LVR01_0063_G02.bBP446436 
LVR010065E09LVR01_0065_E09.bBP445176 AK232542
LVR010102A01LVR01_0102_A01.bBP441010 
LVRM10024E06LVRM1_0024_E06.bBP139558 
LVRM10180F12LVRM1_0180_F12.bCJ005477 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
502C310.400ONCGC/R
T510.600TGC/C


Alignment:      TOP

20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0065_E09.b : tttttaagcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0024_E06.b : cgttgacxxx
ITT01_0013_G10.b : nnnnggatac
ITT01_0072_F05.b : nnnggtgxxx
LVR01_0063_G02.b : ggtttattatagcttagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0084_H04.b :
LVRM1_0180_F12.b :
ITT01_0096_H03.b :
LVR01_0102_A01.b : ggattt
AMP01_0044_D10.b :
20110601C-008733 : ..................................TCCCGGGTCTGTAACAGAAAACGCCA
---------+---------+---------+---------+---------+---------+ 26
LVR01_0065_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCCCGGGTCTGTAACAGAAAACGCCA
LVRM1_0024_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGCCA
ITT01_0013_G10.b : acaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGCCA
ITT01_0072_F05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGCCA
LVR01_0063_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGCCA
KDN01_0084_H04.b : nnnncctgctgtggctat
LVRM1_0180_F12.b : cgttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0096_H03.b : nnaatgxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0102_A01.b : gggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0044_D10.b :
20110601C-008733 : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
---------+---------+---------+---------+---------+---------+ 86
LVR01_0065_E09.b : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
LVRM1_0024_E06.b : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
ITT01_0013_G10.b : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
ITT01_0072_F05.b : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
LVR01_0063_G02.b : GCGCTCAGCTCCAACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
KDN01_0084_H04.b : ggacgctcgctccACCAGTGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
LVRM1_0180_F12.b : xxxxxxxxxxxxxxxxxxxGCAGAACC*CCCAGCCCAGAACTCCCAGGACGGGCCACTCT
ITT01_0096_H03.b : xxxxxxxxxxxxxxxxxxxGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
LVR01_0102_A01.b : xxxxxxxxxxxxxxxxxxxGCAGAACCACCCAGCCCAGAACTCCCAGGACGGGCCACTCT
AMP01_0044_D10.b :
20110601C-008733 : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
---------+---------+---------+---------+---------+---------+ 146
LVR01_0065_E09.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
LVRM1_0024_E06.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
ITT01_0013_G10.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
ITT01_0072_F05.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCAGCTCAG
LVR01_0063_G02.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
KDN01_0084_H04.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
LVRM1_0180_F12.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
ITT01_0096_H03.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
LVR01_0102_A01.b : TAGGCTCCTTCCCTCCACCATGGAGTACCTCTCTGCCCTGAACCCCAGCGGCCTGCTCAG
AMP01_0044_D10.b : atttaagtaacttxxxxxxx
20110601C-008733 : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
---------+---------+---------+---------+---------+---------+ 206
LVR01_0065_E09.b : GTCAGTATCTAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
LVRM1_0024_E06.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
ITT01_0013_G10.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
ITT01_0072_F05.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
LVR01_0063_G02.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
KDN01_0084_H04.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
LVRM1_0180_F12.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
ITT01_0096_H03.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
LVR01_0102_A01.b : GTCAGTATCCAACATGAGCTCCGACTTAGGCCGTAAGGTCTGGACCTCCACTCCACCACC
AMP01_0044_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008733 : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
---------+---------+---------+---------+---------+---------+ 266
LVR01_0065_E09.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
LVRM1_0024_E06.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
ITT01_0013_G10.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
ITT01_0072_F05.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
LVR01_0063_G02.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
KDN01_0084_H04.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
LVRM1_0180_F12.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
ITT01_0096_H03.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
LVR01_0102_A01.b : CCAGCGACCTTTCCGTATCTGTGATCACAAGCGGACCACCCGGAAAGGCCTGACAGCCGC
AMP01_0044_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008733 : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
---------+---------+---------+---------+---------+---------+ 326
LVR01_0065_E09.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
LVRM1_0024_E06.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
ITT01_0013_G10.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
ITT01_0072_F05.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
LVR01_0063_G02.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
KDN01_0084_H04.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
LVRM1_0180_F12.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
ITT01_0096_H03.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
LVR01_0102_A01.b : CACCCGCCAGGAACTGCTAGACAAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
AMP01_0044_D10.b : xxxxxxxxxxxxxxxxxxxxxxtAGGCGCTGGGGACTCTGATGCTGAATGGAGTGTTAAC
20110601C-008733 : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
---------+---------+---------+---------+---------+---------+ 386
LVR01_0065_E09.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
LVRM1_0024_E06.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAACTGTTGGA
ITT01_0013_G10.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
ITT01_0072_F05.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
LVR01_0063_G02.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
KDN01_0084_H04.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
LVRM1_0180_F12.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
ITT01_0096_H03.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
LVR01_0102_A01.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
AMP01_0044_D10.b : ACTGGTGCTTGAGGAGGACGGGACCATGGTGGAGAGCGAGGACTTCTTCCAGCTGTTGGA
20110601C-008733 : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
---------+---------+---------+---------+---------+---------+ 446
LVR01_0065_E09.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
LVRM1_0024_E06.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
ITT01_0013_G10.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
ITT01_0072_F05.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
LVR01_0063_G02.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
KDN01_0084_H04.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
LVRM1_0180_F12.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
ITT01_0096_H03.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
LVR01_0102_A01.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
AMP01_0044_D10.b : GGATGACACATGCCTGATGGTGCTGGAGTTGGGACAGAAATGGAGGCCCAGGAAGAGTGG
20110601C-008733 : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
---------+---------+---------+---------+---------+---------+ 506
LVR01_0065_E09.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
LVRM1_0024_E06.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCCGCAT
ITT01_0013_G10.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCCGCAT
ITT01_0072_F05.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCCGCAT
LVR01_0063_G02.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
KDN01_0084_H04.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
LVRM1_0180_F12.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
ITT01_0096_H03.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCCGCAT
LVR01_0102_A01.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
AMP01_0044_D10.b : GGTGCTGTCATATGGCCTGGGCCGGGAGAAGCCCAAGCACAGCCAGGACATCGCCTGCAT
20110601C-008733 : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
---------+---------+---------+---------+---------+---------+ 566
LVR01_0065_E09.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
LVRM1_0024_E06.b : CACCTTTGACGTATACGAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCANAGC
ITT01_0013_G10.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
ITT01_0072_F05.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
LVR01_0063_G02.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
KDN01_0084_H04.b : CACCTTTGACGTATACAAGCAAAGCCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
LVRM1_0180_F12.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
ITT01_0096_H03.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
LVR01_0102_A01.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
AMP01_0044_D10.b : CACCTTTGACGTATACAAGCAAAACCCCCGAGACCTCTTTGGCAGCCTGAACATCAAAGC
20110601C-008733 : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
---------+---------+---------+---------+---------+---------+ 626
LVR01_0065_E09.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
LVRM1_0024_E06.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAGAT
ITT01_0013_G10.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
ITT01_0072_F05.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
LVR01_0063_G02.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
KDN01_0084_H04.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
LVRM1_0180_F12.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
ITT01_0096_H03.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
LVR01_0102_A01.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
AMP01_0044_D10.b : CACATTCTACGGGCTCTACTCCATGAGTTGTGACATCCAAGGACTCGGCCCAAAGAAAAT
20110601C-008733 : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
---------+---------+---------+---------+---------+---------+ 686
LVR01_0065_E09.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
LVRM1_0024_E06.b : ACTCAGGGAGCTCCTCCCATGGGCCTCTGCACTGCTGCAAGGCCTGCGCCACGTCTTGCT
ITT01_0013_G10.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
ITT01_0072_F05.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
LVR01_0063_G02.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
KDN01_0084_H04.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
LVRM1_0180_F12.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCNAGGCCTGGGCCACGTCTTGCT
ITT01_0096_H03.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
LVR01_0102_A01.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
AMP01_0044_D10.b : ACTCAGGGAGCTCCTCCGATGGGCCTCCGCACTGCTGCAAGGCCTGGGCCACGTCTTGCT
20110601C-008733 : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
---------+---------+---------+---------+---------+---------+ 745
LVR01_0065_E09.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCAAAAAGG
LVRM1_0024_E06.b : GGGAATTTC*TCCACCATTCGTCATGCANTGGAACGTGCTGAGCn
ITT01_0013_G10.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
ITT01_0072_F05.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
LVR01_0063_G02.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGAGGCTGAGCAGTGGCAGCA*AAAGG
KDN01_0084_H04.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
LVRM1_0180_F12.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAAGGGCTGAGCAGTGGCAGCA*AAAGG
ITT01_0096_H03.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA**AAGG
LVR01_0102_A01.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
AMP01_0044_D10.b : GGGAATTTCCTCCACCATTCGTCATGCAGTGGAAGGGGCTGAGCAGTGGCAGCA*AAAGG
20110601C-008733 : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
---------+---------+---------+---------+---------+---------+ 803
LVR01_0065_E09.b : GTCACCCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTGCCCTCTAAACTCATTCCAA
LVRM1_0024_E06.b :
ITT01_0013_G10.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
ITT01_0072_F05.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
LVR01_0063_G02.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
KDN01_0084_H04.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
LVRM1_0180_F12.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTGCCTC
ITT01_0096_H03.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
LVR01_0102_A01.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
AMP01_0044_D10.b : GTCA*CCTTCACCCCTACTGAGCAGGAGCTCTGACCTTCTG*CCTCTAGACTCATTCCAA
20110601C-008733 : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
---------+---------+---------+---------+---------+---------+ 863
LVR01_0065_E09.b : agaaaacagattgtggacacacccaagtttgggggcctttcaacagtggagggctcagta
LVRM1_0024_E06.b :
ITT01_0013_G10.b : GAGACAGATTGTGANCACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
ITT01_0072_F05.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGGCTTCAGACAGTGCAGGCTCAGTAACTC
LVR01_0063_G02.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
KDN01_0084_H04.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
LVRM1_0180_F12.b :
ITT01_0096_H03.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
LVR01_0102_A01.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
AMP01_0044_D10.b : GAGACAGATTGTGACAACACCAAGTTTGGGGGCCTTCAGACAGTGCAGGCTCAGTAACTC
20110601C-008733 : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
---------+---------+---------+---------+---------+---------+ 923
LVR01_0065_E09.b : actcccctgaatttcccccctgtccctcaatcctaagggaacagggcccaatcagcataa
LVRM1_0024_E06.b :
ITT01_0013_G10.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
ITT01_0072_F05.b : ACCTGATTTCCCCACTGTCCCTCA*TCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
LVR01_0063_G02.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
KDN01_0084_H04.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
LVRM1_0180_F12.b :
ITT01_0096_H03.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
LVR01_0102_A01.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACAGGCCCCATCAGCATAATGTCCTA
AMP01_0044_D10.b : ACCTGATTTCCCCACTGTCCCTCAATCCTATGGGACGGGCCCCATCAGCATAATGTCCTA
20110601C-008733 : TACCCCCACCTTATGCCTCCTGGCCACCTTTTCAGTCTCCTGCTCCCTGAAAGACCACAG
---------+---------+---------+---------+---------+---------+ 983
LVR01_0065_E09.b : tggtcctatacccccccccttaatgcctcccgggccccctttctcagtccccctggttcc
LVRM1_0024_E06.b :
ITT01_0013_G10.b : TACCCCCACCTTATGCCTCCTGGCCACCTTTCCAGTCTCCTGCTCCCTGAAAGACcacag
ITT01_0072_F05.b : TACCCCCACCTTATGCCCTCTGGCCACTTTTNCAGTCTCCTGCTCCCTGAAAGAACACAG
LVR01_0063_G02.b : TACCCCCACCTTATGCCTCCTGGGCACTTTTTCAGTCTCCCGCTCCCTGAAAGACACCGC
KDN01_0084_H04.b : TACCCCCACCTTATGCCTCCTGGCCACCTTTTCAGTCTCCTGCTCCCTGAAAGAACACAG
LVRM1_0180_F12.b :
ITT01_0096_H03.b : TACCCCCACCTTATGCCTCCTGGCCCACTTTTCAGTCTCCTGCTCCCCTGAAAGACACAG
LVR01_0102_A01.b : TACCCCCACCTTATGCCTCCTGGCCACCTTTTCAGTCTCCTGCTCCCTGAAAGA*CACAG
AMP01_0044_D10.b : TACCCCCACCTTATGCCTCCTGGCCGCCTTTCCAGTCTCCTGCTCCCTGAAAGACCACAG
20110601C-008733 : CCTGTCCCCGGACACCTGGATCCCACCCTGACTGCTGCTATACCTAGAGGTCCTTATGAC
---------+---------+---------+---------+---------+---------+ 1043
LVR01_0065_E09.b : ccgaaaaaacccaaaccccggttcccccggaacccctgggattcccccccctggaactgg
LVRM1_0024_E06.b :
ITT01_0013_G10.b : ctgtccccggaacctggatcccacctgactgctgctatacctaaagtccctatgaatcct
ITT01_0072_F05.b : GCTGTCCCCGGACACCTGGATCCCACCCTGACTGCTGCTATAactaaaggtcctatgact
LVR01_0063_G02.b : CCTGTCCCCGGACACCTGGATCCAACCCTGACTGCTGCtatacctaaaaggtccttatga
KDN01_0084_H04.b : CCTGTCCCCCGACACCTGGATCCAACCCTGACTGCTGCTATACCTAGAGGTCCTTATGAC
LVRM1_0180_F12.b :
ITT01_0096_H03.b : CCTGTCCCCGGACACTTGGATCCCA*CCTGACTGCTGCTATACCTagagtccttatgact
LVR01_0102_A01.b : CCTGTCCCCGGACACCTGGATCCCACCCTGACTGCTGCTATACCTaaaggtccttatgac
AMP01_0044_D10.b : CCTGTCCCCGGACACCTGNATCCCCCCCTGACTGCTGCTATACCTAGAGGTCCCTATGAC
20110601C-008733 : TCCTCCCGGTCCCTAACTCCTCTACCTTGAGATCGCTATTTCTCTGTATCCCTCCTCCCC
---------+---------+---------+---------+---------+---------+ 1103
LVR01_0065_E09.b : gtggctaaaaccctaaaagggttctctttaagaatcccccccccgggtctccctaaagcc
LVRM1_0024_E06.b :
ITT01_0013_G10.b : ctgtccctagctcctctacctgaaatcgctatttcccggatcccttctccccaaaaaaaa
ITT01_0072_F05.b : cctctgtccctaagctctctacctgaaatcctattnctctgtatccttctccccaaataa
LVR01_0063_G02.b : ctcc
KDN01_0084_H04.b : TCCTCCTGTCCNNTAGCTCCTCTACCTTGAAATCGCTATTctctgtatcctccntcccca
LVRM1_0180_F12.b :
ITT01_0096_H03.b : cctctgtccntagctcctccacctgagatcgcatttcctgtatcttcctcccaaataaca
LVR01_0102_A01.b : tccctcctgtccctaaagctcctctacctttgagatcgcctatttctctggtatcccttc
AMP01_0044_D10.b : TCCTTCCTGTCCCTAACTCCTCTACCTTGAGATCGCTATTTCTCTGTATCCCTCCTCCCC
20110601C-008733 : CAAAAAAC....................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b : cccctcttccccctttgaaaaattccccataattttttctcttggataa
LVRM1_0024_E06.b :
ITT01_0013_G10.b : agggctttcataaaaaaaaaaaaaaaaagcccaatgtgctcaacgagggtccgggccctt
ITT01_0072_F05.b : caaggtgctttcataaaaataaaaagtgtttatcaaaaaaaaaaaaaggccactgtgctc
LVR01_0063_G02.b :
KDN01_0084_H04.b : aattacaaaggtgcttcataaaatataaattgtaaaaaaaaaaaaaaaggccaatgtgct
LVRM1_0180_F12.b :
ITT01_0096_H03.b : aggtgcttcataaaaattaaatgttatcaaaaanannnnnnnnnnnnnnnnnnnnaaggc
LVR01_0102_A01.b : cttcccccaaaataaacaaaagggtgcttttcaaaataaaaaaaaaaaaaaaaagtgttt
AMP01_0044_D10.b : CAAAAAACaaaggtgcttttcataaaatataaaagtggtaaanaaaaaaaaaaaaanaaa
20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b :
LVRM1_0024_E06.b :
ITT01_0013_G10.b : aaaaaacccctggagggcccagattagccgtaccaactttctgtgaaaaggggccccaat
ITT01_0072_F05.b : cactgcagtccggccgctctaatatccctgagggcccagctacggtacagcttcttggaa
LVR01_0063_G02.b :
KDN01_0084_H04.b : ccacttcagtcccgccgctaaaaattcaaaaaaaactccacacctccctgaactgaaata
LVRM1_0180_F12.b :
ITT01_0096_H03.b : cctgtgctcactgcggccggccccctaaatacctgagggccagctacgacacattttgtn
LVR01_0102_A01.b : tttatttaaattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggggcccaccaaag
AMP01_0044_D10.b : annaaaaaattgccgcccgccccgccccccaaaaattttcttaaacctttctttgggccg
20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b :
LVRM1_0024_E06.b :
ITT01_0013_G10.b : aggagccaattaaaacggggctgggccgccttttaaaaccttgagtggaaaaagtcacct
ITT01_0072_F05.b : agggtcctaaatgaatcaattaaacggcctggcgcttttaacccctgaggaaaccgcact
LVR01_0063_G02.b :
KDN01_0084_H04.b : aaagatgcaatgtggtttaactggtatgcccctaaagggtacaaaaaccataccccaaat
LVRM1_0180_F12.b :
ITT01_0096_H03.b : aagggccctaaggggctataacacggccggccctttacacccggcgaaaacctcttggtt
LVR01_0102_A01.b : ttgtgtgttgttcttccccc
AMP01_0044_D10.b : cggccccaaagaaaaagaaaaagggtctttcttttttccagaaaacccgggccagaaagg
20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b :
LVRM1_0024_E06.b :
ITT01_0013_G10.b : gggatctttgaa
ITT01_0072_F05.b : ggaattgaagaaacttctggggtgaaatggcaaaccccgaataaccccggaaaaaatttg
LVR01_0063_G02.b :
KDN01_0084_H04.b : ctccaaaacctttttccggcttcattgggtgcaaaacaaggattttaagtgggtccggcc
LVRM1_0180_F12.b :
ITT01_0096_H03.b : ttgaaaacttttgggggcaattccacaccccaattaccggggaaattttgtggggtaacc
LVR01_0102_A01.b :
AMP01_0044_D10.b : ggttggattcccacaaaaaaaaacccccggggcaacccaggtttttaaaaaatcaaaggg
20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b :
LVRM1_0024_E06.b :
ITT01_0013_G10.b :
ITT01_0072_F05.b : gtaaggacacaccccccgccggattttccgaattaaaaaaccgcggcgcttgttttttcc
LVR01_0063_G02.b :
KDN01_0084_H04.b : aaccaattatcttccttcccaaaaacgggcgggttgggcgggggttctctcagggatatt
LVRM1_0180_F12.b :
ITT01_0096_H03.b : cccggcgccggtttctgaataaaaaaaaccacgttttgtttttccacccgcccccccccc
LVR01_0102_A01.b :
AMP01_0044_D10.b : ggttttgaggccttttgtggatattaacggggcccaagggactctatataatttcccccg
20110601C-008733 : ............................................................
---------+---------+---------+---------+---------+---------+ 1111
LVR01_0065_E09.b :
LVRM1_0024_E06.b :
ITT01_0013_G10.b :
ITT01_0072_F05.b : ccgcc
LVR01_0063_G02.b :
KDN01_0084_H04.b : tcacaggtaaggaaggta
LVRM1_0180_F12.b :
ITT01_0096_H03.b : acaacctgtttttctcccaccacat
LVR01_0102_A01.b :
AMP01_0044_D10.b : ccgcgccccaaccaaaatgtt