Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008741

Sequence: [FASTA format sequence] CCAGCAAGGA GGAGGAGGAG GAAATAGAGA AGGCGGGGCA GGCGGGGCAT GGTTGCCCGA GAAGCCCATC TGTTGCGGTT CTGGGGGCGG GAAGGTTGCT GGATCACTAT TCCTGCTTCC CACTAACTGG AGCTGTGCCT GGGACGGGAT CCGAATCGCC TCGCTGGCAT CTTCCAGGTT ACTCTCTGAG ACCTTGAACT TGGCCCCATC TGGCGATCCT CCGCGCCCTG CCGCGACCCT AGTGCCCGAG AACTGCCCGC GGGCTGCCCA GAGGGTCGTT GTCCCCACCG CCGCCACAGG ACCCTTCAGC GCCAGCCTTC CCCACTCCCC TTCCCAGGCA GGGCCCCCCA ACGCCTCCAG CAGCCTCTCT TCCGCTGTCT GGTCCGCGGA GGTGATTGGT TACCATGGTG AAGCTGGCAG CGAAATGCAT CCTGGCAGGA GACCCAGCTG TGGGCAAAAC CGCCCTGGCA CAGATCTTCC GCAGCGACGG AGCCCAATTC CAGAAAAACT ACACCCTGAC AACAGGGGTG GATCTGGTGG TGAAGACAGT GCCAGTCCCG GACACAGCAG ACAGTGTGGA ACTCTTCATT CTTGACTCGG CCGGCAAGGA GCTGTTTTCG GAAATGCTGG ATAAATTGTG GGAGAGTCCC AGTGTCCTGT GTCTCGTCTA CGATGTGACC AATGAACAGT CCTTCACCAA CTGCAGCAAG TGGCTGGAGA AGGCTCGGTC GCAGATTCCA GGGATCAACC TGCCAGGTGT GCTGGTGGGG AACAAGACAG ACCTGGCCGG CAGGCGAGCG GTGGCGTCGG CTCAGGCCCG GGCGTGGGCG CTGAGCCAGG GGCCTGGAAT GTTTTGAAAC ATCCGTGAAA GAAATAATAA ACTACGAAGC CCCCTTTCCC TCT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
IFT27 intraflagellar transport protein 27 homolog isoform 1 [Homo sapiens]. 238 4e-67 O

IFT27 intraflagellar transport protein 27 homolog isoform 2 [Homo sapiens]. 231 5e-65 O

IFT27 intraflagellar transport protein 27 homolog isoform 3 [Homo sapiens]. 162 1e-44 O

RAB6B ras-related protein Rab-6B [Homo sapiens]. 76.3 4e-14 O

RAB6A ras-related protein Rab-6A isoform b [Homo sapiens]. 75.5 6e-14 O

RAB43 ras-related protein Rab-43 isoform a [Homo sapiens]. 73.6 2e-13 O

RAB6A ras-related protein Rab-6A isoform a [Homo sapiens]. 73.6 2e-13 O

RAB43 ras-related protein Rab-43 isoform a [Homo sapiens]. 73.6 2e-13 O

RAB43 ras-related protein Rab-43 isoform a [Homo sapiens]. 73.6 2e-13 O

RAB43 ras-related protein Rab-43 isoform a [Homo sapiens]. 73.6 2e-13 O

Locus	Definition	Score	E value	FL
IFT27	intraflagellar transport protein 27 homolog isoform 1 [Homo sapiens].	238	4e-67	O
IFT27	intraflagellar transport protein 27 homolog isoform 2 [Homo sapiens].	231	5e-65	O
IFT27	intraflagellar transport protein 27 homolog isoform 3 [Homo sapiens].	162	1e-44	O
RAB6B	ras-related protein Rab-6B [Homo sapiens].	76.3	4e-14	O
RAB6A	ras-related protein Rab-6A isoform b [Homo sapiens].	75.5	6e-14	O
RAB43	ras-related protein Rab-43 isoform a [Homo sapiens].	73.6	2e-13	O
RAB6A	ras-related protein Rab-6A isoform a [Homo sapiens].	73.6	2e-13	O
RAB43	ras-related protein Rab-43 isoform a [Homo sapiens].	73.6	2e-13	O
RAB43	ras-related protein Rab-43 isoform a [Homo sapiens].	73.6	2e-13	O
RAB43	ras-related protein Rab-43 isoform a [Homo sapiens].	73.6	2e-13	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Ift27 intraflagellar transport protein 27 homolog [Mus musculus]. 224 7e-59 O

Rab6b ras-related protein Rab-6B [Mus musculus]. 76.3 3e-14 O

Rab7l1 ras-related protein Rab-7L1 [Mus musculus]. 75.5 5e-14 O

Rab6 ras-related protein Rab-6A isoform 2 [Mus musculus]. 75.5 5e-14 O

Rab6 ras-related protein Rab-6A isoform 1 [Mus musculus]. 73.6 2e-13 O

Rab33a ras-related protein Rab-33A [Mus musculus]. 71.2 1e-12 O

Rab1 ras-related protein Rab-1A [Mus musculus]. 70.9 1e-12 O

Rab10 ras-related protein Rab-10 [Mus musculus]. 70.5 2e-12 O

Rab1b ras-related protein Rab-1B [Mus musculus]. 70.5 2e-12 O

Rab30 ras-related protein Rab-30 [Mus musculus]. 70.1 2e-12 O

Locus	Definition	Score	E value	FL
Ift27	intraflagellar transport protein 27 homolog [Mus musculus].	224	7e-59	O
Rab6b	ras-related protein Rab-6B [Mus musculus].	76.3	3e-14	O
Rab7l1	ras-related protein Rab-7L1 [Mus musculus].	75.5	5e-14	O
Rab6	ras-related protein Rab-6A isoform 2 [Mus musculus].	75.5	5e-14	O
Rab6	ras-related protein Rab-6A isoform 1 [Mus musculus].	73.6	2e-13	O
Rab33a	ras-related protein Rab-33A [Mus musculus].	71.2	1e-12	O
Rab1	ras-related protein Rab-1A [Mus musculus].	70.9	1e-12	O
Rab10	ras-related protein Rab-10 [Mus musculus].	70.5	2e-12	O
Rab1b	ras-related protein Rab-1B [Mus musculus].	70.5	2e-12	O
Rab30	ras-related protein Rab-30 [Mus musculus].	70.1	2e-12	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC474517 PREDICTED: similar to Putative GTP-binding protein RAY-like (Rab-like protein 4) [Canis familiaris]. 243 6e-69

LOC608330 PREDICTED: similar to RAB6A, member RAS oncogene family isoform 1 [Canis familiaris]. 75.1 8e-14 O

LOC478945 PREDICTED: similar to RAB7, member RAS oncogene family-like 1 isoform 1 [Canis familiaris]. 75.1 8e-14 O

LOC478945 PREDICTED: similar to Ras-related protein Rab-7L1 (Rab-7 like protein 1) isoform 2 [Canis familiaris]. 75.1 8e-14 O

LOC612988 PREDICTED: similar to Ras-related protein Rab-33A (Small GTP-binding protein S10) [Canis familiaris]. 71.2 1e-12 O

RAB1A ras-related protein Rab-1A [Canis lupus familiaris]. 70.9 2e-12 O

LOC610762 PREDICTED: similar to RAB1B, member RAS oncogene family isoform 1 [Canis familiaris]. 70.5 2e-12 O

RAB10 ras-related protein Rab-10 [Canis lupus familiaris]. 70.5 2e-12 O

LOC610762 PREDICTED: similar to RAB1B, member RAS oncogene family isoform 5 [Canis familiaris]. 70.5 2e-12 O

LOC610762 PREDICTED: similar to RAB1B, member RAS oncogene family isoform 4 [Canis familiaris]. 70.5 2e-12 O

Locus	Definition	Score	E value	FL
LOC474517	PREDICTED: similar to Putative GTP-binding protein RAY-like (Rab-like protein 4) [Canis familiaris].	243	6e-69
LOC608330	PREDICTED: similar to RAB6A, member RAS oncogene family isoform 1 [Canis familiaris].	75.1	8e-14	O
LOC478945	PREDICTED: similar to RAB7, member RAS oncogene family-like 1 isoform 1 [Canis familiaris].	75.1	8e-14	O
LOC478945	PREDICTED: similar to Ras-related protein Rab-7L1 (Rab-7 like protein 1) isoform 2 [Canis familiaris].	75.1	8e-14	O
LOC612988	PREDICTED: similar to Ras-related protein Rab-33A (Small GTP-binding protein S10) [Canis familiaris].	71.2	1e-12	O
RAB1A	ras-related protein Rab-1A [Canis lupus familiaris].	70.9	2e-12	O
LOC610762	PREDICTED: similar to RAB1B, member RAS oncogene family isoform 1 [Canis familiaris].	70.5	2e-12	O
RAB10	ras-related protein Rab-10 [Canis lupus familiaris].	70.5	2e-12	O
LOC610762	PREDICTED: similar to RAB1B, member RAS oncogene family isoform 5 [Canis familiaris].	70.5	2e-12	O
LOC610762	PREDICTED: similar to RAB1B, member RAS oncogene family isoform 4 [Canis familiaris].	70.5	2e-12	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
IFT27 intraflagellar transport protein 27 homolog [Bos taurus]. 241 1e-68 O

RABL4 PREDICTED: putative GTP-binding protein RAY-like [Bos taurus]. 238 1e-67 O

RABL4 PREDICTED: putative GTP-binding protein RAY-like [Bos taurus]. 236 4e-67 O

RAB6B ras-related protein Rab-6B [Bos taurus]. 76.3 3e-14 O

RAB7L1 ras-related protein Rab-7L1 [Bos taurus]. 75.9 5e-14 O

RAB6A PREDICTED: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus]. 75.5 6e-14 O

RAB6A PREDICTED: RAB6A, member RAS oncogene family isoform 1 [Bos taurus]. 75.5 6e-14 O

RAB6A ras-related protein Rab-6A [Bos taurus]. 73.6 2e-13 O

RAB6A PREDICTED: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus]. 73.6 2e-13 O

RAB33A RAB33A, member RAS oncogene family [Bos taurus]. 71.2 1e-12 O

Locus	Definition	Score	E value	FL
IFT27	intraflagellar transport protein 27 homolog [Bos taurus].	241	1e-68	O
RABL4	PREDICTED: putative GTP-binding protein RAY-like [Bos taurus].	238	1e-67	O
RABL4	PREDICTED: putative GTP-binding protein RAY-like [Bos taurus].	236	4e-67	O
RAB6B	ras-related protein Rab-6B [Bos taurus].	76.3	3e-14	O
RAB7L1	ras-related protein Rab-7L1 [Bos taurus].	75.9	5e-14	O
RAB6A	PREDICTED: RAB6A, member RAS oncogene family-like isoform 2 [Bos taurus].	75.5	6e-14	O
RAB6A	PREDICTED: RAB6A, member RAS oncogene family isoform 1 [Bos taurus].	75.5	6e-14	O
RAB6A	ras-related protein Rab-6A [Bos taurus].	73.6	2e-13	O
RAB6A	PREDICTED: RAB6A, member RAS oncogene family-like isoform 1 [Bos taurus].	73.6	2e-13	O
RAB33A	RAB33A, member RAS oncogene family [Bos taurus].	71.2	1e-12	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100517032 PREDICTED: intraflagellar transport protein 27 homolog [Sus scrofa]. 252 4e-68 O

LOC100522830 PREDICTED: ras-related protein Rab-6B-like [Sus scrofa]. 76.3 2e-14 O

LOC100626414 PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa]. 73.9 1e-13 O

LOC100626414 PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa]. 73.9 1e-13 O

LOC100626414 PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa]. 73.9 1e-13 O

RAB6A ras-related protein Rab-6A [Sus scrofa]. 73.6 1e-13 O

RAB33A ras-related protein Rab-33A [Sus scrofa]. 71.2 7e-13 O

RAB10 RAB10, member RAS oncogene family [Sus scrofa]. 70.5 1e-12 O

RAB13 PREDICTED: ras-related protein Rab-13 [Sus scrofa]. 69.7 2e-12 O

RAB1A ras-related protein Rab-1A [Sus scrofa]. 69.3 3e-12 O

Locus	Definition	Score	E value	FL
LOC100517032	PREDICTED: intraflagellar transport protein 27 homolog [Sus scrofa].	252	4e-68	O
LOC100522830	PREDICTED: ras-related protein Rab-6B-like [Sus scrofa].	76.3	2e-14	O
LOC100626414	PREDICTED: ras-related protein Rab-7L1-like isoform 2 [Sus scrofa].	73.9	1e-13	O
LOC100626414	PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Sus scrofa].	73.9	1e-13	O
LOC100626414	PREDICTED: ras-related protein Rab-7L1-like isoform 3 [Sus scrofa].	73.9	1e-13	O
RAB6A	ras-related protein Rab-6A [Sus scrofa].	73.6	1e-13	O
RAB33A	ras-related protein Rab-33A [Sus scrofa].	71.2	7e-13	O
RAB10	RAB10, member RAS oncogene family [Sus scrofa].	70.5	1e-12	O
RAB13	PREDICTED: ras-related protein Rab-13 [Sus scrofa].	69.7	2e-12	O
RAB1A	ras-related protein Rab-1A [Sus scrofa].	69.3	3e-12	O

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

LNG01 0045 E03 LNG01_0045_E03.b BP437125
LVR01 0058 E06 LVR01_0058_E06.b BP444970 AK232509
OVR01 0041 F09 OVR01_0041_F09.b
OVR01 0046 H10 OVR01_0046_H10.b BP144766
OVR01 0051 F08 OVR01_0051_F08.b BW964180
TES01 0024 G07 TES01_0024_G07.b CJ031640 AK351185

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
449 C 2 0 0.333 W S GCC/A
T 4 0 0.667 GCT/A

Alignment: TOP

20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LVR01_0058_E06.b : ccattataxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0045_E03.b :                     ttgttttttttagcatagtgxxxxxxxxxxxxxxxxxxxx
OVR01_0051_F08.b :                            nnnggcttggactatnacxxxxxxxxxxxxxxx
OVR01_0046_H10.b :                              aaagcatttxxxxxxxxxxxxxxxxxxxxxx
TES01_0024_G07.b :                                                             
OVR01_0041_F09.b :                                                             


20110601C-008741 : ............................CCAGCAAGGAGGAGGAGGAGGAAATAGAGAAG
                   ---------+---------+---------+---------+---------+---------+ 32
LVR01_0058_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxCCAGCAAGGAGGAGGAGGAGGAAATAGAGAAG
LNG01_0045_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggaaATAGAGAAG
OVR01_0051_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgatATAGAGAAG
OVR01_0046_H10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAG
TES01_0024_G07.b :                                          cgcggtggctctggaggAG
OVR01_0041_F09.b : aggccttatggtgcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008741 : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
                   ---------+---------+---------+---------+---------+---------+ 92
LVR01_0058_E06.b : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
LNG01_0045_E03.b : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
OVR01_0051_F08.b : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
OVR01_0046_H10.b : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
TES01_0024_G07.b : GCGGGGCAGGCGGGGCATGGTTGCCCGAGAAGCCCATCTGTTGCGGTTCTGGGGGCGGGA
OVR01_0041_F09.b : xxxxxxxxxxxxxxcctttaaaatggGAGAAGCCCATCTGTTGCGGTTCTGGGGGCCTTA


20110601C-008741 : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
                   ---------+---------+---------+---------+---------+---------+ 152
LVR01_0058_E06.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
LNG01_0045_E03.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
OVR01_0051_F08.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
OVR01_0046_H10.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
TES01_0024_G07.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC
OVR01_0041_F09.b : AGGTTGCTGGATCACTATTCCTGCTTCCCACTAACTGGAGCTGTGCCTGGGACGGGATCC


20110601C-008741 : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
                   ---------+---------+---------+---------+---------+---------+ 212
LVR01_0058_E06.b : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
LNG01_0045_E03.b : AAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
OVR01_0051_F08.b : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
OVR01_0046_H10.b : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
TES01_0024_G07.b : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG
OVR01_0041_F09.b : GAATCGCCTCGCTGGCATCTTCCAGGTTACTCTCTGAGACCTTGAACTTGGCCCCATCTG


20110601C-008741 : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
                   ---------+---------+---------+---------+---------+---------+ 272
LVR01_0058_E06.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
LNG01_0045_E03.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
OVR01_0051_F08.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
OVR01_0046_H10.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
TES01_0024_G07.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA
OVR01_0041_F09.b : GCGATCCTCCGCGCCCTGCCGCGACCCTAGTGCCCGAGAACTGCCCGCGGGCTGCCCAGA


20110601C-008741 : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
                   ---------+---------+---------+---------+---------+---------+ 332
LVR01_0058_E06.b : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
LNG01_0045_E03.b : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
OVR01_0051_F08.b : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
OVR01_0046_H10.b : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
TES01_0024_G07.b : GGGTCGTTGTCCCCACCGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT
OVR01_0041_F09.b : GGGTCGTTGTCCCCACTGCCGCCACAGGACCCTTCAGCGCCAGCCTTCCCCACTCCCCTT


20110601C-008741 : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
                   ---------+---------+---------+---------+---------+---------+ 392
LVR01_0058_E06.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
LNG01_0045_E03.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
OVR01_0051_F08.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
OVR01_0046_H10.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
TES01_0024_G07.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG
OVR01_0041_F09.b : CCCAGGCAGGGCCCCCCAACGCCTCCAGCAGCCTCTCTTCCGCTGTCTGGTCCGCGGAGG


20110601C-008741 : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCTGTG
                   ---------+---------+---------+---------+---------+---------+ 452
LVR01_0058_E06.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCCGTG
LNG01_0045_E03.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCTGTG
OVR01_0051_F08.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCTGTG
OVR01_0046_H10.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCTGTG
TES01_0024_G07.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCCGTG
OVR01_0041_F09.b : TGATTGGTTACCATGGTGAAGCTGGCAGCGAAATGCATCCTGGCAGGAGACCCAGCTGTG


20110601C-008741 : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
                   ---------+---------+---------+---------+---------+---------+ 512
LVR01_0058_E06.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
LNG01_0045_E03.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
OVR01_0051_F08.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
OVR01_0046_H10.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
TES01_0024_G07.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC
OVR01_0041_F09.b : GGCAAAACCGCCCTGGCACAGATCTTCCGCAGCGACGGAGCCCAATTCCAGAAAAACTAC


20110601C-008741 : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
                   ---------+---------+---------+---------+---------+---------+ 572
LVR01_0058_E06.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
LNG01_0045_E03.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
OVR01_0051_F08.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
OVR01_0046_H10.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
TES01_0024_G07.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC
OVR01_0041_F09.b : ACCCTGACAACAGGGGTGGATCTGGTGGTGAAGACAGTGCCAGTCCCGGACACAGCAGAC


20110601C-008741 : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
                   ---------+---------+---------+---------+---------+---------+ 632
LVR01_0058_E06.b : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
LNG01_0045_E03.b : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
OVR01_0051_F08.b : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
OVR01_0046_H10.b : AGTGTGGAACTCTTCATTCTTGACGCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
TES01_0024_G07.b : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT
OVR01_0041_F09.b : AGTGTGGAACTCTTCATTCTTGACTCGGCCGGCAAGGAGCTGTTTTCGGAAATGCTGGAT


20110601C-008741 : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACGATGTGACCAATGAACAGTCC
                   ---------+---------+---------+---------+---------+---------+ 692
LVR01_0058_E06.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACGATGTGACCAATGAACAGTCC
LNG01_0045_E03.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACGATGTGACCAATGAACAGTCC
OVR01_0051_F08.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACCATGTGACCAATGAACAGTCC
OVR01_0046_H10.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACGATGTGACCAATGAACAGTCC
TES01_0024_G07.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCCTCTACGATGTGACCCATGAACAGTCC
OVR01_0041_F09.b : AAATTGTGGGAGAGTCCCAGTGTCCTGTGTCTCGTCTACGATGTGACCAATGAACAGTCC


20110601C-008741 : TTCACCAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCGCAGA*TTCCAGGGATCAACCT
                   ---------+---------+---------+---------+---------+---------+ 751
LVR01_0058_E06.b : TTCACCAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCGCAGA*TTCCAGGGATCACCCT
LNG01_0045_E03.b : TTCACCAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCGCAGA*TTCCAGGGATCAACCT
OVR01_0051_F08.b : TTCACCAACTGCAGCAAGTGGCTGGAGAAAGCTCGGTCGCAGAATT*CAGGGATCAACCT
OVR01_0046_H10.b : TTCACCAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCGCAGA*TTCCAGGGATCAACCT
TES01_0024_G07.b : TTCACCAACTGCATCAAGTGGCTGGAGAAAGCTCGGTCGCAAA*TTTCCAGGGATACCCT
OVR01_0041_F09.b : TTCACCAACTGCAGCAAGTGGCTGGAGAAGGCTCGGTCGCAGATTTCCAGGGATCAACCT


20110601C-008741 : GCCAGGTGTGCTGGTGGGGAACAAGACAGACCTGGCCGGCAGGCGAGCGGTGGCGTCGGC
                   ---------+---------+---------+---------+---------+---------+ 811
LVR01_0058_E06.b : GCCAGGTGTGCTGGTGGGTAACAAGACAGACCTGGCCGGCAGGCGAGCGGTGGAGTCGGC
LNG01_0045_E03.b : GCCAGGTGTGCTGGTGGGGAACAAGACAGACCTGGCCGGCAGGCGAGCGGTGGCGTCGGC
OVR01_0051_F08.b : GCCAGGTGTGCTGGTGGGGAAACAGACAGAACTGGCCGGGCGGCGAGCGGTGGCGTCCGC
OVR01_0046_H10.b : GCCAGGTGTGCTGGTGGGGAACAAGACAGACCTGGCCGGCAGGCGAGCGGTGGCGTCGGC
TES01_0024_G07.b : GCCCGGTGTGCTGGTGGGTAACAAGACAGACCTGGCCGGCAACCGAACGGGGGATTCGGT
OVR01_0041_F09.b : GCCAGGTGTGCTGGTGGGGAACAAGACAGACCTGGCCGGCAGGCGAGCGGTGGCGTCGGC


20110601C-008741 : TCAGGCCCGGGCGTGGGCGCTGAGCCAGGGGCCTGGAATGTTTTGAAACATCCGTGAAAG
                   ---------+---------+---------+---------+---------+---------+ 871
LVR01_0058_E06.b : TCAGGCCCGGGCGTGGGCGCTGAACCAGGGGCCTGGAATGGTTTAAAACATCCTTGAAGG
LNG01_0045_E03.b : TCAGGCCCGGGCGTGGGCGCTGAGCCAGGGCCCTGGAATGTTTTGAAACATCCGTGAAat
OVR01_0051_F08.b : TCACGCCCGGGCGTGGGCGCTGAACCAGGG*CCTGGAAATGTTTTAAACTTCCGGGAAAG
OVR01_0046_H10.b : TCAGGCCCGGGCGTGGGCGCTGAGCCAGGG*CCTGGAATGTTTTGAAACATCCGTGAAAg
TES01_0024_G07.b : TCAGGCCCGGcgtgggcccctacccagggccgtaatgtttttaaacttccctgaaggaaa
OVR01_0041_F09.b : TTATGCCCGGCCGTTGGGCGCTGATCCAGGGCCTGTAATGTTTTTAAACTTCCGTcaaag


20110601C-008741 : AAATAATAAACTACGAAGCCCCCTTTCCCTCT............................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : AGATAATAAACTACGAAGCCCCCcttccactctctggccaaacagttccccccacctgtt
LNG01_0045_E03.b : ccttccacagagctcccactgtggctcagtggtaatgaaacccactagtaatcatgaaga
OVR01_0051_F08.b : AAATGATAAACTACGAAGCCCCCTTTCCCTCTtcgggccaacagttccacccccttgtcc
OVR01_0046_H10.b : agatgataaactaacaagccccctttcactctctggccaaacagttcccccacctgtacc
TES01_0024_G07.b : aggaataactacgaaacccccttccacttctgggcaacatgttccccccctggaccatga
OVR01_0041_F09.b : gagatgataaacttacaaaccccccttcccctcctctggtcaatcagtttccccaccctg


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : accagaaaaaactgggaaggttttccaggctctagtggtgaaggggctggcttgaactgt
LNG01_0045_E03.b : ctcaggttcaatccctggcctcgcttcggtggtttgaagaccccggcgtttcccgtgagc
OVR01_0051_F08.b : cagaaaaaactggaaggtttttccgggctcttattgtgaaggggctggcttggaactttt
OVR01_0046_H10.b : aagaagaagctggagggttttccaggcttttagtgggaaggggctggcttgaactgtttc
TES01_0024_G07.b : aaacctggaggtttccaaggtcccattggaaggggctggctggaactttcccccaaaaaa
OVR01_0041_F09.b : tacctaagaaaaccttgaaggttttccagattttaattgggatgggggttggtttgaact


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : tccccccaaaacaggcccaccccttgttggggccacctgggcccggggggcctccctctc
LNG01_0045_E03.b : cggtgatggcctggctccccccactgggcccaagtccctttgggctgccaaaattttttc
OVR01_0051_F08.b : tcccccaaaaaaggcccaacccgtgtttgggcaccctgggcccggggggctccctcttcc
OVR01_0046_H10.b : ccccaaaaaagggccaccactgttggggcacctgggcccgggggcctccggtcttcctcc
TES01_0024_G07.b : ggccacccattttggggacctgggccgggggctccttccccctttaaaatgggaaaaaat
OVR01_0041_F09.b : tttctcccgaaacacgcccattactttttgggcacccttggtccgtgggcttccctcttc


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : ccctcttaaaaaaatgggaaagaaaaatgggcattttgcccccgggcccccttttcccaa
LNG01_0045_E03.b : tttggggacccctcccccctggaaccctccggggggggggggaaaaaaaccacccccccc
OVR01_0051_F08.b : ctctttaaaaatgggaaaaaaaatggtatttttcccccggggcccttta          
OVR01_0046_H10.b : taaaaaagggggaaaaaaaatgggaatttgccccggggccgcttttcccaattctttttg
TES01_0024_G07.b : gtttttgccggcgccttccaaatttgtggtgacctttattaaattggggtttaaatggaa
OVR01_0041_F09.b : cctctttaaaatcgggaaaaaaaaaaggccattggccccgggcctcttttccacactctt


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : tccttttggggggacaaaacctttttaaaaataaaaataaggaagggaaaaaaaaaaatg
LNG01_0045_E03.b : ttttccctggcggggggggggggaaggaaaaaattcccccccccagccccacctttcccc
OVR01_0051_F08.b :                                                             
OVR01_0046_H10.b : ggggaaacacacctttttaaaaaaaaaaaaagaaagggaaataaaaaatgggggaaaaaa
TES01_0024_G07.b : aaaaaaataaaaggccctttggttttaatcatgggctggcgcgctttattttctgtaaaa
OVR01_0041_F09.b : ttgggtatacaactcttttaattataaaatgtcggttttataaaatttgtcaaaataaaa


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b : gggaa                                                      
LNG01_0045_E03.b : ccccccccccccccccccaaaaaaaaaaagggagaaa                      
OVR01_0051_F08.b :                                                             
OVR01_0046_H10.b : aaaaaaaaaaaaaaaaaaaaaaaaaaaaaagggggccccccccccccctttttgtg   
TES01_0024_G07.b : aaaccccctccccccccctgttctgaattaataagagggacatgttgtgttaattgtttt
OVR01_0041_F09.b : atacaacaaaaaaaaaaca                                        


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b :                                                             
LNG01_0045_E03.b :                                                             
OVR01_0051_F08.b :                                                             
OVR01_0046_H10.b :                                                             
TES01_0024_G07.b : ttccccctcaaagttcaaaataatatacattccacttatctcatagtactctttccgatt
OVR01_0041_F09.b :                                                             


20110601C-008741 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 903
LVR01_0058_E06.b :                                                             
LNG01_0045_E03.b :                                                             
OVR01_0051_F08.b :                                                             
OVR01_0046_H10.b :                                                             
TES01_0024_G07.b : ttacaggggttgta                                             
OVR01_0041_F09.b :