[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-008880
Length:
1,225
Sequence:
[FASTA format sequence]
GACCCTTCGG GCCTCCTGGA ATGGGAGAGA GTAGGAGGTG TCGCGAGAGT TGACCTCTAG
CTTTGTGGGA GCTTTAACTA TGGCGAGCTT TGGGGTCGGG GCTGAACAGG AGCCCCTCTT
AGGAGACCAT ACACCAGGAA GCAGGTTAAG AACCCAAGAT AATCTCTGTA AGGATGTGGG
TTCGATCCCT GGCCTTGCTT ACTGGGTTAA GGATCTGGTG TTGCCACAGC TGTAGCATAG
GTTACAGATG AGGCTTGGAT CCAGTGTTGC CTACAGCTGC TGCTCTCATT CAACCCCTGG
CCCCCAACCC AGGAACGTCC ATATGCCACA GAGGGGATAT TATAGAAACT GAGGAGCATT
ATAAGAGCCG ATGGAGATCT ATTAGGATTC TGTATTTTAC TATGTTTCTC AGCAGTGTAG
ATTGATCAGA CAGCCGATGC AAGTTTTTTG GGCTGGGTTA TTGCTACATT TAGCCTTGGC
CAAATGGCAG CTTCACCTTT ATTTGGTTTG TGGTCTAATT ATAGACCAAG AAAAGAACCT
CTCATCGTTT CCATTTTCAT TTCGGTGGCA GCCAACTGCC TCTATGCCTA TGTCCACCTA
CCACCTTCTC ATAATAAATA CTACATGTTG GTTGCTCGTG GATTAGTGGG ATTTGGAGCA
GGAAATGTAG CTGTTATTAG ATCATATATT GCTGGTGCTA CCTCTCTTCA AGAAAGAACA
AGTGCCATGG CAAACACAAG TGCATGCCAA GCATTAGGTT TTATCCTAGG TCCAGTTTTT
CAGACTTGTT TTGCACTCAT TGGAGAAAAG GGTGTGACAT GGGATACCAT TAAGCTGCAG
ATAAACATGT ATACAGCACC TGTTTTACTT AGTGTCTTCC TGGGAATATT AAATATTATT
CTGATCCTTA CTATATTAAG AGAACATCGT GTGGATGACT CAGGACGACA GTGTAAAAAT
ATTAATTTTG AAGAAGTAAG TACCGATGAA GTTCAGGTTC CCCAAGGAAA TATTGATCAA
GTTGCTGTTG TGGCCACCAA TGTTCTGTTT TTCGTGGTTC TGTTTATCTT TGCCCTTTTT
GAAACCATCG TTACTCCATT AACAATGGAT ATGTATGCCT GGACCAGAGA ACAAGCTGTA
TTATATGATG GAATAATACT TGCTGCTCTT GGAGTTGAAG CAGTTATTAT TTTCATGGGG
ATAAAATTAG TTTCCAAAAA GATTG
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | MFSD8 | major facilitator superfamily domain-containing protein 8 [Homo sapiens]. | 420 | e-128 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Mfsd8 | major facilitator superfamily domain-containing protein 8 [Mus musculus]. | 423 | e-127 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC476086 | PREDICTED: similar to CG8596-PA [Canis familiaris]. | 324 | 9e-89 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| MFSD8 | major facilitator superfamily domain-containing protein 8 [Bos taurus]. | 447 | e-136 | O |
|
| MFSD8 | PREDICTED: hypothetical protein [Bos taurus]. | 447 | e-136 | O |
|
| MFSD9 | PREDICTED: major facilitator superfamily domain containing 10-like [Bos taurus]. | 50.4 | 3e-06 | O |
|
| MFSD9 | PREDICTED: major facilitator superfamily domain containing 10-like [Bos taurus]. | 50.4 | 3e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| MFSD8 | PREDICTED: major facilitator superfamily domain-containing protein 8 [Sus scrofa]. | 468 | e-144 | O |
|
| LOC100517355 | PREDICTED: major facilitator superfamily domain-containing protein 8-like [Sus scrofa]. | 80.1 | 2e-15 | O |
|
20110601C-008880 : ..........................GACCCTTCGGGCCTCCTGGAATGGGAGAGAGTAG
---------+---------+---------+---------+---------+---------+ 34
KDN01_0093_F08.b : nnnnncctgcggtggctatggtgtctGACCCTTCGGGCCTCCTGGAATGGGAGAGAGTAG
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : GAGGTGTCGCGAGAGTTGACCTCTAGCTTTGTGGGAGCTTTAACTATGGCGAGCTTTGGG
---------+---------+---------+---------+---------+---------+ 94
KDN01_0093_F08.b : GAGGTGTCGCGAGAGTTGACCTCTAGCTTTGTGGGAGCTTTAACTATGGCGAGCTTTGGG
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : GTCGGGGCTGAACAGGAGCCCCTCTTAGGAGACCATACACCAGGAAGCAGGTTAAGAACC
---------+---------+---------+---------+---------+---------+ 154
KDN01_0093_F08.b : GTCGGGGCTGAACAGGAGCCCCTCTTAGGAGACCATACACCAGGAagcaggttaagaacc
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : CAAGATAATCTCTGTAAGGATGTGGGTTCGATCCCTGGCCTTGCTTACTGGGTTAAGGAT
---------+---------+---------+---------+---------+---------+ 214
KDN01_0093_F08.b : caagataatctctgtaaggatgtgggttcgatccctggccttgcttactgggttaaggat
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : CTGGTGTTGCCACAGCTGTAGCATAGGTTACAGATGAGGCTTGGATCCAGTGTTGCCTAC
---------+---------+---------+---------+---------+---------+ 274
KDN01_0093_F08.b : ctggtgttgccacagctgtagcataggttacagatgaggcttggatccagtgttgcctac
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : AGCTGCTGCTCTCATTCAACCCCTGGCCCCCAACCCAGGAACGTCCATATGCCACAGAGG
---------+---------+---------+---------+---------+---------+ 334
KDN01_0093_F08.b : agctgctgctctcattcaacccctggcccccaacccaggaacgtccatatgccacagAGG
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : GGATATTATAGAAACTGAGGAGCATTATAAGAGCCGATGGAGATCTATTAGGATTCTGTA
---------+---------+---------+---------+---------+---------+ 394
KDN01_0093_F08.b : GGATATTATAGAAACTGAGGAGCATTATAAGAGCCGATGGAGATCTATTAGGATTCTGTA
ADR01_0014_G11.b :
OVRM1_0150_A06.b :
20110601C-008880 : TTTTACTATGTTTCTCAGCAGTGTAGATTGATCAGACAGCCGATGCAAGTTTTTTGGGCT
---------+---------+---------+---------+---------+---------+ 454
KDN01_0093_F08.b : TTTTACTATGTTTCTCAGCAGTGTAGATTGATCAGACAGCCGATGCAAGTTTTTTGGGCT
ADR01_0014_G11.b : nnaaatgaacaxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0150_A06.b : nagttgtcxxxxxxxx
20110601C-008880 : GGGTTATTGCTACATTTAGCCTTGGCCAAATGGCAGCTTCACCTTTATTTGGTTTGTGGT
---------+---------+---------+---------+---------+---------+ 514
KDN01_0093_F08.b : GGGTTATTGCTACATTTAGCCTTGGCCAAATGGCAGCTTCACCTTTATTTGGTTTGTGGT
ADR01_0014_G11.b : xxxxxxxxxxxxxxxxxxxgCTTGGCCAAATGGCAGCTTCACCTTTATTTGGTTTGTGGT
OVRM1_0150_A06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTATTTGGTTTGTGGT
20110601C-008880 : CTAATTATAGACCAAGAAAAGAACCTCTCATCGTTTCCATTTTCATTTCGGTGGCAGCCA
---------+---------+---------+---------+---------+---------+ 574
KDN01_0093_F08.b : CTAATTATAGACCAAGAAAAGAACCTCTCATCGTTTCCATTTTCATTTCGGTGGCAGCCA
ADR01_0014_G11.b : CTAATTATAGACCAAGAAAAGAACCTCTCATCGTTTCCATTTTCATTTCGGTGGCAGCCA
OVRM1_0150_A06.b : CTAATTATAGACCAAGAAAAGAACCTCTCATCGTTTCCATTTTCATTTCGGTGGCAGCCA
20110601C-008880 : ACTGCCTCTATGCCTATGTCCACCTACCACCTTCTCATAATAAATACTACATGTTGGTTG
---------+---------+---------+---------+---------+---------+ 634
KDN01_0093_F08.b : ACTGCCTCTATGCCTATGTCCACCTACCACCTTCTCATAATAAATACTACATGTTGGTTG
ADR01_0014_G11.b : ACTGCCTCTATGCCTATGTCCACCTACCACCTTCTCATAATAAATACTACATGTTGGTTG
OVRM1_0150_A06.b : ACTGCCTCTATGCCTATGTCCACCTACCACCTTCTCATAATAAATACTACATGTTGGTTG
20110601C-008880 : CTCGTGGATTAGTGGGATTTGGAGCAGGAAATGTAGCTGTTATTAGATCATATATTGCTG
---------+---------+---------+---------+---------+---------+ 694
KDN01_0093_F08.b : CTCGTGGATTAGTGGGATTTGGAGCAGGAAATGTAGCTGTTATTAGATCATATATTGCTG
ADR01_0014_G11.b : CTCGTGGATTAGTGGGATTTGGAGCAGGAAATGTAGCTGTTATTAGATCATATATTGCTG
OVRM1_0150_A06.b : CTCGTGGATTAGTGGGATTTGGAGCAGGAAATGTAGCTGTTATTAGATCATATATTGCTG
20110601C-008880 : GTGCTACCTCTCTTCAAGAAAGAACAAGTGCCATGGCAAACACAAGTGCATGCCAAGCAT
---------+---------+---------+---------+---------+---------+ 754
KDN01_0093_F08.b : GTGCTACCTCTCTTCAAGAAAGAACAAGTGCCATGGCAAACACAAGTGCATGCCAAGCAT
ADR01_0014_G11.b : GTGCTACCTCTCTTCAAGAAAGAACAAGTGCCATGGCAAACACAAGTGCATGCCAAGCAT
OVRM1_0150_A06.b : GTGCTACCTCTCTTCAAGAAAGAACAAGTGCCATGGCAAACACAAGTGCATGCCAAGCAT
20110601C-008880 : TAGGTTTTATCCTAGGTCCAGTTTTTCAGACTTGTTTTGCACTCATTGGAGAAAAGGGTG
---------+---------+---------+---------+---------+---------+ 814
KDN01_0093_F08.b : TAGGTTTTATCCTAGGTCCAGTTTTTCAGACTTGTTTTGCACTCATTGGAGAAAAGGGTG
ADR01_0014_G11.b : TAGGTTTTATCCTAGGTCCAGTTTTTCAGACTTGTTTTGCACTCATTGGAGAAAAGGGTG
OVRM1_0150_A06.b : TAGGTTTTATCCTAGGTCCAGTTTTTCAGACTTGTTTTGCACTCATTGGAGAAAAGGGTG
20110601C-008880 : TGACATGGGATACCATTAAGCTGCAGATAAACATGTATACAGCACCTGTTTTACTTAGTG
---------+---------+---------+---------+---------+---------+ 874
KDN01_0093_F08.b : TGACATGGGATACCATTAAGCTGCAGATAAACATGTATACAGCACCTGTTTTACTTAGTG
ADR01_0014_G11.b : TGACATGGGATACCATTAAGCTGCAGATAAACATGTATACAGCACCTGTTTTACTTAGTG
OVRM1_0150_A06.b : TGACATGGGATACCATTAAGCTGCAGATAAACATGTATACAGCACCTGTTTTACTTAGTG
20110601C-008880 : TCTTCCTGGGAATATTAAATATTATTCTGATCCTTACTATATTAAGAGAACATCGTGTGG
---------+---------+---------+---------+---------+---------+ 934
KDN01_0093_F08.b : TCTTCCTGGGAAATATAAATATTATTCTGATCCTTACTATATTAAGAAGACATCGTGTGG
ADR01_0014_G11.b : TCTTCCTGGGAATATTAAATATTATTCTGATCCTTACTATATTAAGAGAACATCGTGTGG
OVRM1_0150_A06.b : TCTTCCTGGGAATATTAAATATTATTCTGATCCTTACTATATTAAGAGAACATCGTGTGG
20110601C-008880 : ATGACTCAGGACGACAGTGTAAAAATATTAATTTTGAAGAAGTAAGTACCGATGAAGTTC
---------+---------+---------+---------+---------+---------+ 994
KDN01_0093_F08.b : ATGACTCANGACGACAGTGGTAAAATATTAATTTTGAAGAAGTAAGTACCGATGAAAGTC
ADR01_0014_G11.b : ATGACTCAGGACGACAGTGTAAAAATATTAATTTTGAAGAAGTAAGTACCGATGAAGTTC
OVRM1_0150_A06.b : ATGACTCAGGACGACAGTGTAAAAATATTAATTTTGAAGAAGTAAGTACCGATGAAGTTC
20110601C-008880 : AGGTTCCCCAAGGAAATATTGATCAAGTTGCTGTTGTGGCCACCAATGTTCTGTTTTTCG
---------+---------+---------+---------+---------+---------+ 1054
KDN01_0093_F08.b : AGGTTCCCCAAGGAAAATATTGATCAGTGGCTGTTGTGGCCACCAATGTTCTGTTTTTCG
ADR01_0014_G11.b : AGGTTCCCCAAGGAAATATTGATCAAGTTGCTGTTGTGGCCACCAATGTTCTGTTTTTCG
OVRM1_0150_A06.b : AGGTTCCCCAAGGAAATATTGATCAAGTTGCTGTTGTGGCCACCAGTGTTCTGTTTTTCG
20110601C-008880 : TGGTTCTGTTTATCTTTGCCCTTTTTGAAACCATCGTTACTCCATTAACAATGGATATGT
---------+---------+---------+---------+---------+---------+ 1114
KDN01_0093_F08.b : GGGTTCTGTTTATCTT*GCCCTTTTTGAAacatcgttactccaataacaatgaaatgtat
ADR01_0014_G11.b : TGGTTCTGTTTATCTTTGCCCTTTTTTGAAACATCGTTACTCCATTAACAATGGATATGT
OVRM1_0150_A06.b : TGGTTCTGTTTATCTTTGCCCTTTTTGAAACCATCGTTACTCCATTAACAATGGATATGT
20110601C-008880 : ATGCCTGGACCAGAGAACAAGCTGTATTATATGATGGAATAATACTTGCTGCTCTTGGAG
---------+---------+---------+---------+---------+---------+ 1174
KDN01_0093_F08.b : gcctggcccaaaaacagctggattaattgatgaattaaaactggcggtcctgaattgagg
ADR01_0014_G11.b : ATGCCTGGAACAGAGA*CAAGCTGTATTATATGATGGAAATACACTTGCTGCTCTTGGAG
OVRM1_0150_A06.b : ATGCCTGGACCAGAGAACAAGCTGTATTATATGATGGAATAATACTTGCTGCTCTTGGAG
20110601C-008880 : TTGAAGCAGTTATTATTTTCATGGGGATAAAATTAGTTTCCAAAAAGATTG.........
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b : cagtattatttctggggaataaattantttcaaaagattgaaagacggctttcctatgga
ADR01_0014_G11.b : TTGAAGCAGNTATTATTTTCATGGGGATAAAATaatttccaaaaagatggaagacgtggc
OVRM1_0150_A06.b : TTGAAGCAGTTATTATTTTCATGGGGATTAAATTAGTTTCCAAAAAGATTG
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b : agaatccccntgagggggtggctctttactggtacttggggaatcattccaaaaaagggg
ADR01_0014_G11.b : tatctactgggagactcatcgttgaagggttggcctcctttacctgtaacctggggaatc
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b : aaaattccaaaaattcccctaaacactgtggaaataattcctcttggagtcccaaaatat
ADR01_0014_G11.b : atttcctaaaaaacattggaaaatttacaaatatttcatcctaaaacccattggggaaaa
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b : caaaagcaacgtgttgtctttaaacggtggctaccccatatctgtgccttggaaagcggg
ADR01_0014_G11.b : attataatctttgaaattcccaaaaaaatccaatgaagccaatgggttccttttaaaaac
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b : ttgaaaagccc
ADR01_0014_G11.b : cgggggcctaaccccccaaatccactggccaattctgaaaacactgtcaaattgaaagcc
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b :
ADR01_0014_G11.b : tccttccgcaaggtagtccaaaattaatcaaaatttgggaccaaacccggggggtaaggg
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b :
ADR01_0014_G11.b : gtggttaaaatcctgaatgaaccgattttggaacggttctcacaagataatccggggccc
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b :
ADR01_0014_G11.b : aaagggttacctttggggggcaggtgttaccccccccggggggttaaaaaaaatcttttt
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b :
ADR01_0014_G11.b : tgggggggaattggaaattcttctggggaaaatttggaaacctcttttggcggcaaagga
OVRM1_0150_A06.b :
20110601C-008880 : ............................................................
---------+---------+---------+---------+---------+---------+ 1225
KDN01_0093_F08.b :
ADR01_0014_G11.b : aaagatcc
OVRM1_0150_A06.b :
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