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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008885

Length: 1,166

Sequence [FASTA format sequence]
GTTGTCCCGC CCCACGCCTC TTGCCTGGCA GCCGATCTGT CTCCCTGCTA GAAATCCTCT
CCAGCCGGAT GGCCCTGGCC CCGCCCTGCG ACTGTTGCCT GGCTGGCTTC TGGTCGGCGG
GCGGAGGGAG GGCCTAGGCG GTGTGCGTTG GCGGGAGGGA AGTCAATTTC CCTTGTCTCG
CCTCCGGCCG CCCGTGGCGG GAGGAAGCAG GGGCTAGGTC AGTGGACAGC ATGGCAGGAG
CTCCGGATGA GCGTGGCCCG GGCCCCGCGG CTAGGGAACC ACTGCAGCAG CAACACGTCG
GATGCCAAGT CTTCCCCGAG CGGCTGGCCC AGGGGAAGCC CCAGCAAGGG TTCCTCTCCA
GCTTCTTTAC CGACAACCAG AAGTGCCAGC TGATGCTCCT GAAGACGCTG GAGACAAATC
CATATGTCAA ACTTCTACTT GATGCCATGA AGCATTCAGG TTGCGCTGTG AGCAAAGAAA
GACACTTTTC CTGTGAAGAT TGTAATGGAA ATGTCAGTGG GGGTTTTGAC GCTTCTGTGT
CTCAGATTGT TTTGTGCCAG AATAACATCC GGAATCAGGC TCATATGAAC AGAGTGGTCA
CCCATGAACT CATTCATGCA TTTGATCATT GTCGTGCTCA TGTGGACTGG TTCACCAATA
TCAGACATTT GGCCTGTTCT GAGGTTCGAG CTGCTAACCT TAGTGGAGAC TGCTCACTTT
TAAATGAAAT ATTCAGGTTA CATTTTGGAT TAAAACAACA TCATCAGACT TGTGTGAGAG
ACAGAGCCAT TCTTTCTATC CTGGCTGTTA GGAACATAAG CAGAGAAGTC GCTCAGAAGG
CTGTTGATGA AGTTTTTGAA TCTTGTTTCA ATGACCACGA ACCTTTTGGA AGGATCCCTC
ATAACCAGAC CTATGCAAGA TACGCTCATA GAGACTTTCA GAACCGGGAT CGGTACTATT
CAAATATATG AAGGCAGTGA CACTTTTATA TCACAGAGCT GCAGTGATCA TGAAAAAAAA
AATTGTGGTT CCCAAGTGGA CAAACATATA AAACGTAAGT CATCAATTAA ATACACAGAA
GACGCCAAAG ATGCTGATTC TAGCATATGA TCAGGAAAAA TTACTGTGGT TAGAAATGAA
ACTGCCTTGG GAGTTCCTGC CATGGC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinXRCC6BP1mitochondrial inner membrane protease ATP23 homolog [Homo sapiens]. 479e-135O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinXrcc6bp1mitochondrial inner membrane protease ATP23 homolog isoform 1 [Mus musculus]. 418e-117O
Contig/Assembly ProteinXrcc6bp1mitochondrial inner membrane protease ATP23 homolog isoform 2 [Mus musculus]. 2902e-78O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC474422PREDICTED: similar to Ku70-binding protein 3 [Canis familiaris]. 432e-121O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinXRCC6BP1mitochondrial inner membrane protease ATP23 homolog [Bos taurus]. 478e-135O
Contig/Assembly ProteinXRCC6BP1PREDICTED: Ku70-binding protein-like [Bos taurus]. 478e-135O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010087G02ADR01_0087_G02.bDB789250 
BFLT10050G11BFLT1_0050_G11.bFS643977 
ITT010004D12ITT01_0004_D12.bBW976355 
ITT010052A01ITT01_0052_A01.bBW980567 
OVR010048G04OVR01_0048_G04.bBP144093 AK394886
OVR010081C03OVR01_0081_C03.bBW966747 AK234542
TCH010100D07TCH01_0100_D07.bCJ029747 
UTR010089D07UTR01_0089_D07.bCJ038214 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
536C200.250WSTCC/S
T600.750TCT/S


Alignment:      TOP

20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0048_G04.b : aggcctttgcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0100_D07.b : nnnggctaggactatnacxxxxxxxxxxxxxxxxxx
ADR01_0087_G02.b :
OVR01_0081_C03.b :
ITT01_0004_D12.b :
ITT01_0052_A01.b :
BFLT1_0050_G11.b :
UTR01_0089_D07.b :
20110601C-008885 : ..........................GTTGTCCCGCCCCACGCCTCTTGCCTGGCAGCCG
---------+---------+---------+---------+---------+---------+ 34
OVR01_0048_G04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxGTTGTCCCGCCCCACGCCTCTTGCCTGGCAGCCG
TCH01_0100_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCACGCCTCTTGCCTGGCAGCCG
ADR01_0087_G02.b : nnnnnggtcaacaxxxxxxxxxxxxxxx
OVR01_0081_C03.b :
ITT01_0004_D12.b :
ITT01_0052_A01.b :
BFLT1_0050_G11.b :
UTR01_0089_D07.b :
20110601C-008885 : ATCTGTCTCCCTGCTAGAAATCCTCTCCAGCCGGATGGCCCTGGCCCCGCCCTGCGACTG
---------+---------+---------+---------+---------+---------+ 94
OVR01_0048_G04.b : ATCTGTCTCCCTGCTAGAAATCCTCTCCAGCCGGATGGCCCTGGCCCCGCCCTGCGACTG
TCH01_0100_D07.b : ATCTGTCTCCCTGCTAGAAATCCTCTCCAGCCGGATGGCCCTGGCCCCGCCCTGCGACTG
ADR01_0087_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxCAGCCGGATGGCCCTGGCCCCGCCCTGCGACTG
OVR01_0081_C03.b : cxxxxxxxxxxx
ITT01_0004_D12.b :
ITT01_0052_A01.b :
BFLT1_0050_G11.b :
UTR01_0089_D07.b :
20110601C-008885 : TTGCCTGGCTGGCTTCTGGTCGGCGGGCGGAGGGAGGGCCTAGGCGGTGTGCGTTGGCGG
---------+---------+---------+---------+---------+---------+ 154
OVR01_0048_G04.b : TTGCCTGGCTGGCTTCTGGTCGGCGGGCGGAGGGAGGGCCTAGGCGGTGTGCGTTGGCGG
TCH01_0100_D07.b : TTGCCTGGCTGGCTTCTGGTCGGCGGGCGGAGGGAGGGCCTAGGCGGTGTGCGTTGGCGG
ADR01_0087_G02.b : TTGCCTGGCTGGCTTCTGGTCGGCGGGCGGAGGGAGGGCCTAGGCGGTGTGCGTTGGCGG
OVR01_0081_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0004_D12.b : aatagtgtaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0052_A01.b : ttaagatgaacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0050_G11.b :
UTR01_0089_D07.b :
20110601C-008885 : GAGGGAAGTCAATTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
---------+---------+---------+---------+---------+---------+ 214
OVR01_0048_G04.b : GAGGGAAGTCAATTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
TCH01_0100_D07.b : GAGGGAAGTCAATTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
ADR01_0087_G02.b : GAGGGAAGTCAATTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
OVR01_0081_C03.b : xxxxxxxxxxxxTTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
ITT01_0004_D12.b : xxxxxxxxxxxxTTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
ITT01_0052_A01.b : xxxxxxxxxxxxTTTCCCTTGTCTCGCCTCCGGCCGCCCGTGGCGGGAGGAAGCAGGGGC
BFLT1_0050_G11.b : nctttcgtcagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0089_D07.b :
20110601C-008885 : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
---------+---------+---------+---------+---------+---------+ 274
OVR01_0048_G04.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
TCH01_0100_D07.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
ADR01_0087_G02.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
OVR01_0081_C03.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
ITT01_0004_D12.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
ITT01_0052_A01.b : TAGGTCAGTGGACAGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
BFLT1_0050_G11.b : xxxxxxxxxxxxxxGCATGGCAGGAGCTCCGGATGAGCGTGGCCCGGGCCCCGCGGCTAG
UTR01_0089_D07.b : nnnggcttggactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008885 : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
---------+---------+---------+---------+---------+---------+ 334
OVR01_0048_G04.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
TCH01_0100_D07.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
ADR01_0087_G02.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
OVR01_0081_C03.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
ITT01_0004_D12.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
ITT01_0052_A01.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
BFLT1_0050_G11.b : GGAACCACTGCAGCAGCAACACGTCGGATGCCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
UTR01_0089_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAGTCTTCCCCGAGCGGCTGGCCCAGGG
20110601C-008885 : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
---------+---------+---------+---------+---------+---------+ 394
OVR01_0048_G04.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
TCH01_0100_D07.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
ADR01_0087_G02.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
OVR01_0081_C03.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
ITT01_0004_D12.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
ITT01_0052_A01.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
BFLT1_0050_G11.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
UTR01_0089_D07.b : GAAGCCCCAGCAAGGGTTCCTCTCCAGCTTCTTTACCGACAACCAGAAGTGCCAGCTGAT
20110601C-008885 : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
---------+---------+---------+---------+---------+---------+ 454
OVR01_0048_G04.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
TCH01_0100_D07.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
ADR01_0087_G02.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
OVR01_0081_C03.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
ITT01_0004_D12.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
ITT01_0052_A01.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
BFLT1_0050_G11.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
UTR01_0089_D07.b : GCTCCTGAAGACGCTGGAGACAAATCCATATGTCAAACTTCTACTTGATGCCATGAAGCA
20110601C-008885 : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
---------+---------+---------+---------+---------+---------+ 514
OVR01_0048_G04.b : TTCAGGTTACGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
TCH01_0100_D07.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
ADR01_0087_G02.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
OVR01_0081_C03.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
ITT01_0004_D12.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
ITT01_0052_A01.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
BFLT1_0050_G11.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTTTTCCTGTGAAGATTGTAATGGAAATGT
UTR01_0089_D07.b : TTCAGGTTGCGCTGTGAGCAAAGAAAGACACTCTTCCTGTGAAGATTGTAATGGAAATGT
20110601C-008885 : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
---------+---------+---------+---------+---------+---------+ 574
OVR01_0048_G04.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
TCH01_0100_D07.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
ADR01_0087_G02.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
OVR01_0081_C03.b : CAGTGGGGGTTTTGACGCTTCCGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
ITT01_0004_D12.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
ITT01_0052_A01.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
BFLT1_0050_G11.b : CAGTGGGGGTTTTGACGCTTCTGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
UTR01_0089_D07.b : CAGTGGGGGTTTTGACGCTTCCGTGTCTCAGATTGTTTTGTGCCAGAATAACATCCGGAA
20110601C-008885 : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
---------+---------+---------+---------+---------+---------+ 634
OVR01_0048_G04.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
TCH01_0100_D07.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
ADR01_0087_G02.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
OVR01_0081_C03.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
ITT01_0004_D12.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
ITT01_0052_A01.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTAATCATTGTCG
BFLT1_0050_G11.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
UTR01_0089_D07.b : TCAGGCTCATATGAACAGAGTGGTCACCCATGAACTCATTCATGCATTTGATCATTGTCG
20110601C-008885 : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
---------+---------+---------+---------+---------+---------+ 694
OVR01_0048_G04.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
TCH01_0100_D07.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
ADR01_0087_G02.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
OVR01_0081_C03.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
ITT01_0004_D12.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGGGCTGC
ITT01_0052_A01.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
BFLT1_0050_G11.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
UTR01_0089_D07.b : TGCTCATGTGGACTGGTTCACCAATATCAGACATTTGGCCTGTTCTGAGGTTCGAGCTGC
20110601C-008885 : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
---------+---------+---------+---------+---------+---------+ 754
OVR01_0048_G04.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
TCH01_0100_D07.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
ADR01_0087_G02.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
OVR01_0081_C03.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTGACATTTTGGATTAGA
ITT01_0004_D12.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
ITT01_0052_A01.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
BFLT1_0050_G11.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
UTR01_0089_D07.b : TAACCTTAGTGGAGACTGCTCACTTTTAAATGAAATATTCAGGTTACATTTTGGATTAAA
20110601C-008885 : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
---------+---------+---------+---------+---------+---------+ 814
OVR01_0048_G04.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
TCH01_0100_D07.b : *CAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
ADR01_0087_G02.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
OVR01_0081_C03.b : ACGACATCATCAGACTTGTGTGAGAGACAGAGCCGATCTTTCTATCCTGGCTGTTAGGAA
ITT01_0004_D12.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGAAA
ITT01_0052_A01.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
BFLT1_0050_G11.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
UTR01_0089_D07.b : ACAACATCATCAGACTTGTGTGAGAGACAGAGCCATTCTTTCTATCCTGGCTGTTAGGAA
20110601C-008885 : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
---------+---------+---------+---------+---------+---------+ 874
OVR01_0048_G04.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
TCH01_0100_D07.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGA*TCCTGTTTCAATGA
ADR01_0087_G02.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
OVR01_0081_C03.b : CATTAACAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTCTTGAATCTTGTTTCAATGA
ITT01_0004_D12.b : CATAAGCAGAGGAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTNCATGA
ITT01_0052_A01.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
BFLT1_0050_G11.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
UTR01_0089_D07.b : CATAAGCAGAGAAGTCGCTCAGAAGGCTGTTGATGAAGTTTTTGAATCTTGTTTCAATGA
20110601C-008885 : CCACGAACCTTTTGGAAGGATCCCTCATAACCAGACCTATGCAAGATACGCTCATAGAGA
---------+---------+---------+---------+---------+---------+ 934
OVR01_0048_G04.b : CCACGAACCTTTTtgaaagaatccctcataaccaaaaccaatgcaaaaaacgctcataga
TCH01_0100_D07.b : CCACAANCCTTTTGGAAGGATCCCNTCATACCAGACCTATGCAAGATACGCTCATAGAGA
ADR01_0087_G02.b : CCACGAACCTTTTTGGAAGATCCCTCATAACCAGAACTATGCAAGATACGCTCATAGAGA
OVR01_0081_C03.b : CCACn
ITT01_0004_D12.b : CTACGAACCTTTTGGAAGGATCCCTCATAACCAGACCTATGCGAGATACGCTCATAGAGA
ITT01_0052_A01.b : CCACGAACCTTTTGGAAGGATCCCTCATAACCAGACCTATGCAAGATACGCTCATAGAGA
BFLT1_0050_G11.b : CCACGAACCTTTTGGAAGGATCCCTCATAACCAGACCTATGCAAGATACGCTCATAGAGA
UTR01_0089_D07.b : CCACGAACCTTTTGGAAGGATCCCTCATAACCAGACCTATGCAAGATACGCTCATAGAGA
20110601C-008885 : CTTTCAGAACCGGGATCGGTACTATTCAAATATATGAAGGCAGTGACACTTTTATATCAC
---------+---------+---------+---------+---------+---------+ 994
OVR01_0048_G04.b : agactttcagaacccgggaatcggaactaattcaaatatattaaaggcaggggaaacttt
TCH01_0100_D07.b : CTTTCAGAACCGGGATCGGTACTATTCAAATATATGAAGGCAGTGACACTTT*ATATCAC
ADR01_0087_G02.b : CTTTCAGAAACGGGATCGGTACTATTCAAATATATGGAGGCAGTGACACTTTTATATCCC
OVR01_0081_C03.b :
ITT01_0004_D12.b : CTTTCAGAACCGGGATCGGTACTATTCAAATATATGAAGGCAGTGACACTTTTATATCAC
ITT01_0052_A01.b : CTTTCAGAACCGGGATCGGTACTATTCAAATATATGAAGGCAGTGACACTTTTATATCAC
BFLT1_0050_G11.b : CTTTCAGAACCGGGATCGGTACTATTCNAATATATGAAGGCAGTGACACTTTTATATCAC
UTR01_0089_D07.b : CTTTCAGAACCGGGATCGGTACTATTCAAATATATGAAGGCAGTGACACTTTTATATCAC
20110601C-008885 : AGAGCTGCAGTGATCATGA*AAAAAAAAATTGTGGTTCCCAAGTGGACAAACATATAAAA
---------+---------+---------+---------+---------+---------+ 1053
OVR01_0048_G04.b : ttaatactcaaaaaatttgcaatgaattcatgaaaaaaaaaaaatttgtgggtttccccc
TCH01_0100_D07.b : AAAGCTGCAGTGATCATGA*AAAAAAAttgtgggtcccaagtgaacacctttaaaacgta
ADR01_0087_G02.b : AGAGCTGCAGGGATCATGA*AAAAAAAAttgttgttccccaggggacaaacttttaaacg
OVR01_0081_C03.b :
ITT01_0004_D12.b : AGAGCTGCAGTGATCATGA*AAAAAAAAATTGTGGGTCCCCAGTGGACAAACACANTAAA
ITT01_0052_A01.b : AGAGCTGCAGTGATCATGA*AAAAAA*AATTGT*GGTCCCCAGTGGACAAACATATAAAA
BFLT1_0050_G11.b : AGAGCTGCAGTGATCATGAAAAAAAAAAATTGTGGTTCCCAAGTGGACAAACATATAAAA
UTR01_0089_D07.b : AGAGCTGCAGTGATCATGA*AAAAAAAAATTGTGGTTTCCAAGTGGACAAACATATAAAA
20110601C-008885 : CGTAAGTCATCAATTAAATACACAGAAGACGCCAAAGATGCTGATTCTAGCATATGATCA
---------+---------+---------+---------+---------+---------+ 1113
OVR01_0048_G04.b : agggggaaaaaaacattaataaaaaccgtaaagattcattccaattttaaaaaaaaccac
TCH01_0100_D07.b : gtcatcaattaatccccgaaaaccccagatgctgatcttgctatgatcggaaagtactgt
ADR01_0087_G02.b : taagtcttcatttaaatcccagaagacgccaaaatgctgattctacctttgatccggaaa
OVR01_0081_C03.b :
ITT01_0004_D12.b : CGTAAGTCATCATTTAAATACACAGAAGACG*CAAAGATGCTGATTCTAGCATATGATCA
ITT01_0052_A01.b : CGTAAGTCATCATTTA*ATACACAGAAGACGCCAAAGATGCTGAATCTAGCATATGATCA
BFLT1_0050_G11.b : CGTAAGTCATCAATTAAATACACAGAAGACGCCCAAGATGCTGATTCTAGCATATGATCA
UTR01_0089_D07.b : CGTAAGTCATCAATTAAATACACAGAAGACGCCAAAGATGCTGATTCTAGCATATGATCA
20110601C-008885 : GGAAAAATTACTGTGGTTAGAAATGAAACTGCCTTGGGAGTTCCTGCCATGGC.......
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b : caaaaaaaaaacccccccaaaaaaatatgctttaaatttttcttataaccaaaattttaa
TCH01_0100_D07.b : ggtagaatgaactgcttggaagtccgcccggacagtgttaaaactgactgtacgccgcgg
ADR01_0087_G02.b : atacctgtggaaagaatgaaactgcctggaaatcctgccccgcccagtgtttaaaatctg
OVR01_0081_C03.b :
ITT01_0004_D12.b : GGAAAAgtaactgtggtaaaaaatgaactgccttgggagtcctgccaccgcaagtggttt
ITT01_0052_A01.b : GGAAAAgtaactgtgggtaagaatgaaactgcctttgggagttctgcccacgcacagtgg
BFLT1_0050_G11.b : AGAAAAGTAACTGTGGGTAGAAATTGAACTGCCTTgggaagttctgccacggcacaatgg
UTR01_0089_D07.b : GGAAAAAGTACTGTGGTAAGAAATGAAACTGCCTTGGGAGTTCCTGCCATGGCacagtgg
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b : aaaaattcagaggaaaaaaaaaaaaaaaata
TCH01_0100_D07.b : ccctcaagggggccccatcccaccggccaagggtaaaggggttggagtgacccaggtaac
ADR01_0087_G02.b : atgtaacggctcggggcctcccaaaggtggcccccatccccacctggccaatgggttaaa
OVR01_0081_C03.b :
ITT01_0004_D12.b : agaaatctgactgtagcggctcgggtcactccagagtgtgcactcaatccccagcctggc
ITT01_0052_A01.b : ttaagaatctgactgtaacggctcgggtcctccagaagtgtgcactcaatccccacctgg
BFLT1_0050_G11.b : ttaagaatctgactgtagcggctcgggtcactccagagggggcaatcaatcccaacccgg
UTR01_0089_D07.b : ttaagaatctgactggagcggctcgggtcattccaaaggtgggcactcgatccccagcct
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b :
TCH01_0100_D07.b : ctggctgggaggggggcctaaaaaaaaaaagccattgctatcgggtccgccttattccag
ADR01_0087_G02.b : ggggtccggacaattcccccagtttatcccttgtctggggacggggggggcttaaaaaaa
OVR01_0081_C03.b :
ITT01_0004_D12.b : gcatggggttaaaatggtgttggtggcattgcaacctcagttcaatccctggcttgggaa
ITT01_0052_A01.b : cgcattgggttaaagtgtgttggggcanttgcaacctagttcattcttggttcgggaacc
BFLT1_0050_G11.b : gccaaggggttaaagggggtttggggaattgcacctcaggtccatcccttgtcgggaaac
UTR01_0089_D07.b : ggcgcanggggttaaagtggtgttgtgccatttgcacctcaggttcaatccttggcctgg
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b :
TCH01_0100_D07.b : ggccatt
ADR01_0087_G02.b : aaaaaaaaaaattgtgaacctccgggaatttttttcttttggaaaagagaaaattctttc
OVR01_0081_C03.b :
ITT01_0004_D12.b : ccgggtgtggcattaaaaaaaaaaaaaaaggccccatggtctcaactttaagttccggcc
ITT01_0052_A01.b : tggtgttgcccttaaaaaaaaaaaaagaaagaacgggtgtaacctcaggcgaacttttgt
BFLT1_0050_G11.b : cggtggggcatttaaaaaaaaaaaaaaaaaggccccttttcccaactccggtccccggcc
UTR01_0089_D07.b : ggaactggttggggccattaaaaaaaaaaaaaaggcccaatgtgctccacctgcaggtcc
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b :
TCH01_0100_D07.b :
ADR01_0087_G02.b :
OVR01_0081_C03.b :
ITT01_0004_D12.b :
ITT01_0052_A01.b : agcatttggtaaaaaggcaaataatgctttttaaaagtaaaaaaaaaaaaaaagccagtt
BFLT1_0050_G11.b : ctaaataatctaaaaaaaaacctcccacccccccgtgaactaaaaaaaaaaaaagccagt
UTR01_0089_D07.b : ggccccttctaaaaatcccccaggggcccagcttaccggacccgcttttttgaaaaaggg
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b :
TCH01_0100_D07.b :
ADR01_0087_G02.b :
OVR01_0081_C03.b :
ITT01_0004_D12.b :
ITT01_0052_A01.b : gtccaacgagggtcggcgcccttaaatccttgggggccaaataccaacccctttttgtaa
BFLT1_0050_G11.b : ggtgtgtaacttgtttgtgccctaaagggttcaaaaaaagaaactccaaatttccaaaaa
UTR01_0089_D07.b : gtccctaagggaggctatttaaacctggc
20110601C-008885 : ............................................................
---------+---------+---------+---------+---------+---------+ 1166
OVR01_0048_G04.b :
TCH01_0100_D07.b :
ADR01_0087_G02.b :
OVR01_0081_C03.b :
ITT01_0004_D12.b :
ITT01_0052_A01.b : gggcccctaggggttataaacggccgggccc
BFLT1_0050_G11.b : aat
UTR01_0089_D07.b :