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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008912

Length: 1,242

Sequence [FASTA format sequence]
AGTCATTCCA TTAGATAGCA GCAGCTATTT AAACGCTCCA GTGGGAGCTC AGACATTTCT
GCTTGTAGAA GTCCTTGGCT GCTCCACTCC CTCATTCTTG GAATAAATTC AGAAATGACA
CTTGATGACC TCAAGAGCAA CAGTATGAAG GATCAACCTG ACGAGAAATC AAATGGAGAT
AAAGCTGAAG GTCCTCAGAG TCTTTCCACT TGGCGGTGGC GCCCTGCTGC CCTGATTCTA
GGGTTACTGT GCCTGGGATT ACTGGTGACC GTTATACTGC TGATAATACA GTTGTCCCAG
GTGTCTGATC TCCTGAAGCA ACAGAAAGTG AAACTTACTC ACCAGGAAGA CATCCTGGAG
GGACAGGCTT TAGCCCAGCG CCAGGCGGAA AAATCTTCCC AGGAGTCACA AAGGGAACTC
ACAGAAATGA TAGAAACTCT TGCCCACAAA TTGGATGAAA AATCCAAGAA ACTGATGGAG
CTTCAACAGC AGAACTTGAA TCTTCAAAAA GCTCTGGAGA AAGCGGCAAA CTTTTCAGGT
CCTTGTCCCC AAGACTGGCT CTGGCATGAA GAAAACTGTT ACAAATTTTC CTCTGGCCCA
TTTAGTTGGG AAAAAAGCCG GGAGAACTGC TTGTCTTTGG ATGCCCAACT GCTGAAGATT
AATAGCACAG ACGATCTGGA ATTCATCCAG CAAACCATCG CCCATTCCAG TTTCCCATTC
TGGATGGGGT TATCTCTGAG GAAACCCAAC AACTCATGGC TCTGGGAGGA CGGTACTCCT
TTGATGCCCC ACTTGTTTAG ACTCCAGGGA GCTGCTTCCC AAATGTATCC TTCAGGCACC
TGTGCGTATA TACACAGGGG AATTGTTTTT GCTGAAAACT GCATTTTAAA TGCATTCAGT
ATATGTCAGA AGAGGGCGAA TCTCTTGAGA GCACAGTGAA TTTGAAAGCT TTGGAAGAAA
AGGAGAAGAT CTTTGGATTC TTTTCTGGAA TTTAAGCTAT ACTTGGTCAC TTAAGTGCAA
ACCATGAAAG CCCTGACAAC TGCCTGTTGC TCTATGAGTG CAGAACTCCT TAGCAGAGAC
TGGGCCTCAG CTACCTGACA GCTTGGTTAT CAATAGTTTT AATTCTATCC CTTTCTCTCT
GTGTTCCCTA GCGTGTCCCA AGCCCCCCTG CCTGCCATCA GTTAAGTCCC TTTCCTGTTT
TCTATATTTC TAAGAACTTG TTGCTTAATG CAAGGTCGTA AA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinOLR1oxidized low-density lipoprotein receptor 1 isoform 1 [Homo sapiens]. 3133e-85O
Contig/Assembly ProteinOLR1oxidized low-density lipoprotein receptor 1 isoform 3 [Homo sapiens]. 1741e-43O
Contig/Assembly ProteinCLEC7AC-type lectin domain family 7 member A isoform b [Homo sapiens]. 1112e-24O
Contig/Assembly ProteinCLEC7AC-type lectin domain family 7 member A isoform a [Homo sapiens]. 1112e-24O
Contig/Assembly ProteinCLEC7AC-type lectin domain family 7 member A isoform e [Homo sapiens]. 1112e-24O
Contig/Assembly ProteinCLEC1AC-type lectin domain family 1 member A [Homo sapiens]. 95.59e-20O
Contig/Assembly ProteinCLEC12BC-type lectin domain family 12 member B isoform 1 [Homo sapiens]. 93.63e-19O
Contig/Assembly ProteinOLR1oxidized low-density lipoprotein receptor 1 isoform 2 [Homo sapiens]. 93.63e-19O
Contig/Assembly ProteinKLRF2killer cell lectin-like receptor subfamily F member 2 [Homo sapiens]. 898e-18O
Contig/Assembly ProteinCLEC9AC-type lectin domain family 9 member A [Homo sapiens]. 86.35e-17O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinOlr1oxidized low-density lipoprotein receptor 1 [Mus musculus]. 2155e-56
Contig/Assembly ProteinClec7aC-type lectin domain family 7 member A [Mus musculus]. 1057e-23O
Contig/Assembly ProteinClec12bC-type lectin domain family 12 member B [Mus musculus]. 1003e-21O
Contig/Assembly ProteinClec12bC-type lectin domain family 12 member B [Mus musculus]. 1003e-21O
Contig/Assembly ProteinKlrk1NKG2-D type II integral membrane protein isoform a [Mus musculus]. 85.11e-16O
Contig/Assembly ProteinKlrk1NKG2-D type II integral membrane protein isoform b [Mus musculus]. 85.11e-16O
Contig/Assembly ProteinClec1bC-type lectin domain family 1 member B isoform 2 [Mus musculus]. 82.47e-16O
Contig/Assembly ProteinClec1bC-type lectin domain family 1 member B isoform 1 [Mus musculus]. 82.47e-16O
Contig/Assembly ProteinKlrb1ckiller cell lectin-like receptor subfamily B member 1C isoform 2 [Mus musculus]. 81.31e-15O
Contig/Assembly ProteinKlrb1ckiller cell lectin-like receptor subfamily B member 1C isoform 1 [Mus musculus]. 81.31e-15O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486694PREDICTED: similar to oxidised low density lipoprotein (lectin-like) receptor 1 [Canis familiaris]. 3471e-95O
Contig/Assembly ProteinLOC611385PREDICTED: similar to C-type lectin, superfamily member 12 isoform a [Canis familiaris]. 1096e-24O
Contig/Assembly ProteinLOC486696PREDICTED: similar to C-type lectin domain family 1, member B [Canis familiaris]. 921e-18O
Contig/Assembly ProteinLOC486695PREDICTED: similar to C-type lectin-like receptor-1 [Canis familiaris]. 91.71e-18
Contig/Assembly ProteinLOC611355PREDICTED: similar to NKG2-D type II integral membrane protein (NKG2-D activating NK receptor) (NK cell receptor D) (Killer cell lectin-like receptor subfamily K member 1) [Canis familiaris]. 84.32e-16O
Contig/Assembly ProteinLOC611394PREDICTED: similar to C-type lectin domain family 9, member A [Canis familiaris]. 82.86e-16O
Contig/Assembly ProteinLOC611429PREDICTED: similar to Killer cell lectin-like receptor subfamily F, member 1 (Lectin-like receptor F1) (Activating coreceptor NKp80) [Canis familiaris]. 73.25e-13O
Contig/Assembly ProteinLOC611402PREDICTED: similar to macrophage antigen h [Canis familiaris]. 72.48e-13O
Contig/Assembly ProteinKLRD1natural killer cells antigen CD94 [Canis lupus familiaris]. 71.22e-12O
Contig/Assembly ProteinCD209CD209 molecule [Canis lupus familiaris]. 70.53e-12O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinOLR1oxidized low-density lipoprotein receptor 1 [Bos taurus]. 361e-100O
Contig/Assembly ProteinCLEC7AC-type lectin domain family 7 member A [Bos taurus]. 1181e-26O
Contig/Assembly ProteinKLRK1NKG2-D type II integral membrane protein [Bos taurus]. 94.71e-19O
Contig/Assembly ProteinCLEC12BC-type lectin domain family 12 member B [Bos taurus]. 91.71e-18O
Contig/Assembly ProteinCLEC1AC-type lectin domain family 1 member A [Bos taurus]. 87.82e-17O
Contig/Assembly ProteinLOC100294723PREDICTED: Killer cell lectin-like receptor subfamily B member 1B allele A-like [Bos taurus]. 86.74e-17O
Contig/Assembly ProteinLOC100294723PREDICTED: Killer cell lectin-like receptor subfamily B member 1B allele A-like [Bos taurus]. 86.74e-17O
Contig/Assembly ProteinCLEC1BPREDICTED: QDED721-like [Bos taurus]. 84.32e-16O
Contig/Assembly ProteinCLEC1BPREDICTED: C-type lectin domain family 1, member B [Bos taurus]. 84.32e-16O
Contig/Assembly ProteinCLEC9APREDICTED: C-type lectin domain family 9, member A-like [Bos taurus]. 79.75e-15O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinOLR1oxidized low-density lipoprotein receptor 1 [Sus scrofa]. 449e-126O
Contig/Assembly ProteinCLEC7AC-type lectin domain family 7 member A [Sus scrofa]. 1102e-24O
Contig/Assembly ProteinLOC100519958PREDICTED: c-type lectin domain family 12 member B-like [Sus scrofa]. 95.55e-20O
Contig/Assembly ProteinKLRK1NKG2-D type II integral membrane protein [Sus scrofa]. 842e-16O
Contig/Assembly ProteinKLRF1PREDICTED: killer cell lectin-like receptor subfamily F member 1 [Sus scrofa]. 83.23e-16O
Contig/Assembly ProteinLOC100519776PREDICTED: c-type lectin domain family 1 member B-like [Sus scrofa]. 82.45e-16O
Contig/Assembly ProteinLOC100623580PREDICTED: c-type lectin domain family 1 member B-like [Sus scrofa]. 826e-16O
Contig/Assembly ProteinLOC100519486PREDICTED: c-type lectin domain family 1 member A-like isoform 2 [Sus scrofa]. 826e-16O
Contig/Assembly ProteinLOC100520135PREDICTED: c-type lectin domain family 12 member A-like [Sus scrofa]. 69.73e-12O
Contig/Assembly ProteinCD209CD209 antigen [Sus scrofa]. 672e-11O


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010006C06AMP01_0006_C06.bBW955385 
AMP010025E04AMP01_0025_E04.bBW956872 
AMP010027C04AMP01_0027_C04.bBW957013 
AMP010033C06AMP01_0033_C06.bBW957345 
AMP010069A04AMP01_0069_A04.bBW959973 
AMP010070H01AMP01_0070_H01.bBW960130 AK230974
DCI010107E09DCI01_0107_E09.bDB799066 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
197A300.500WNCAG/Q
G300.500CGG/R
211C300.500WNCGG/R
T300.500TGG/W
212G300.600WNTGG/W
T200.400TTG/L


Alignment:      TOP

20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0070_H01.b : atagtctatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0027_C04.b : atttaaggacatctaagggctgctcgcgcgccgxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0069_A04.b : nnaagatatatatagc
AMP01_0025_E04.b : tataaang
AMP01_0033_C06.b : nnnccgatactntnnat
AMP01_0006_C06.b :
DCI01_0107_E09.b :
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0070_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0027_C04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0069_A04.b : gatacttaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0025_E04.b : gaatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0033_C06.b : aagatacttgggctgctcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0006_C06.b :
DCI01_0107_E09.b :
20110601C-008912 : .......................................AGTCATTCCATTAGATAGCAG
---------+---------+---------+---------+---------+---------+ 21
AMP01_0070_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTCATTCCATTAGATAGCAG
AMP01_0027_C04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxattccATTAGATAGCAG
AMP01_0069_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0025_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0033_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0006_C06.b : ttttccgtaactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_E09.b :
20110601C-008912 : CAGCTATTTAAACGCTCCAGTGGGAGCTCAGACATTTCTGCTTGTAGAAGTCCTTGGCTG
---------+---------+---------+---------+---------+---------+ 81
AMP01_0070_H01.b : CAGCTATTTAAACGCTCCAGTGGGAGCTCAGACATTTCTGCTTGTAGAAGTCCTTGGCTG
AMP01_0027_C04.b : CAGCTATTTAAACGCTCCAGTGGGAGCTCAGACATTTCTGCTTGTAGAAGTCCTTGGCTG
AMP01_0069_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTTCTGCTTGTAGAAGTCCTTGGCTG
AMP01_0025_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTTCTGCTTGTAGAAGTCCTTGGCTG
AMP01_0033_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTTCTGCTTGTAGGAGTCCTTGGCTG
AMP01_0006_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_E09.b :
20110601C-008912 : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
---------+---------+---------+---------+---------+---------+ 141
AMP01_0070_H01.b : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
AMP01_0027_C04.b : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
AMP01_0069_A04.b : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
AMP01_0025_E04.b : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
AMP01_0033_C06.b : CTCCACTCCCTCATTCTTGGAATAAATTCAGAAATGACACTTGATGACCTCAAGAGCAAC
AMP01_0006_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaAAGAGCAAC
DCI01_0107_E09.b :
20110601C-008912 : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCAGAGT
---------+---------+---------+---------+---------+---------+ 201
AMP01_0070_H01.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCGGAGT
AMP01_0027_C04.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCAGAGT
AMP01_0069_A04.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCGGAGT
AMP01_0025_E04.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCAGAGT
AMP01_0033_C06.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCGGAGT
AMP01_0006_C06.b : AGTATGAAGGATCAACCTGACGAGAAATCAAATGGAGATAAAGCTGAAGGTCCTCAGAGT
DCI01_0107_E09.b :
20110601C-008912 : CTTTCCACTTGGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
---------+---------+---------+---------+---------+---------+ 261
AMP01_0070_H01.b : CTTTCCACTCTGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
AMP01_0027_C04.b : CTTTCCACTTGGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
AMP01_0069_A04.b : CTTTCCACTCTGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
AMP01_0025_E04.b : CTTTCCACTTGGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
AMP01_0033_C06.b : CTTTCCACTCTGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
AMP01_0006_C06.b : CTTTCCACTTGGCGGTGGCGCCCTGCTGCCCTGATTCTAGGGTTACTGTGCCTGGGATTA
DCI01_0107_E09.b :
20110601C-008912 : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
---------+---------+---------+---------+---------+---------+ 321
AMP01_0070_H01.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
AMP01_0027_C04.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
AMP01_0069_A04.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
AMP01_0025_E04.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
AMP01_0033_C06.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
AMP01_0006_C06.b : CTGGTGACCGTTATACTGCTGATAATACAGTTGTCCCAGGTGTCTGATCTCCTGAAGCAA
DCI01_0107_E09.b :
20110601C-008912 : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
---------+---------+---------+---------+---------+---------+ 381
AMP01_0070_H01.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
AMP01_0027_C04.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
AMP01_0069_A04.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
AMP01_0025_E04.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
AMP01_0033_C06.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
AMP01_0006_C06.b : CAGAAAGTGAAACTTACTCACCAGGAAGACATCCTGGAGGGACAGGCTTTAGCCCAGCGC
DCI01_0107_E09.b :
20110601C-008912 : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
---------+---------+---------+---------+---------+---------+ 441
AMP01_0070_H01.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGACACTCTT
AMP01_0027_C04.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
AMP01_0069_A04.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
AMP01_0025_E04.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
AMP01_0033_C06.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
AMP01_0006_C06.b : CAGGCGGAAAAATCTTCCCAGGAGTCACAAAGGGAACTCACAGAAATGATAGAAACTCTT
DCI01_0107_E09.b : nnnaatttattnnnnaccgatatctaagggctxx
20110601C-008912 : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
---------+---------+---------+---------+---------+---------+ 501
AMP01_0070_H01.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGATTCAACAGCAGAACTTGAAA
AMP01_0027_C04.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
AMP01_0069_A04.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
AMP01_0025_E04.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
AMP01_0033_C06.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
AMP01_0006_C06.b : GCCCACAAATTGGATGAAAAATCCAAGAAACTGATGGAGCTTCAACAGCAGAACTTGAAT
DCI01_0107_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008912 : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCAAGACTGGCTC
---------+---------+---------+---------+---------+---------+ 561
AMP01_0070_H01.b : TCTTCAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCNAGACTGGCTC
AMP01_0027_C04.b : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCAAGACTGGCTC
AMP01_0069_A04.b : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCGGGTCCTTGTCCCCAAGACTGGCTC
AMP01_0025_E04.b : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCAAGACTGGCTC
AMP01_0033_C06.b : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCAAGACTGGCTC
AMP01_0006_C06.b : CTTCAAAAAGCTCTGGAGAAAGCGGCAAACTTTTCAGGTCCTTGTCCCCAAGACTGGCTC
DCI01_0107_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008912 : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGGAAAAAAGCCGG
---------+---------+---------+---------+---------+---------+ 621
AMP01_0070_H01.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGAAAAAAACCGGG
AMP01_0027_C04.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGGAAAAAAGCCGG
AMP01_0069_A04.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTANGTGGGAAAAAAGCCGG
AMP01_0025_E04.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGGAAAAAAGCCGG
AMP01_0033_C06.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGGAAAAAAGCCGG
AMP01_0006_C06.b : TGGCATGAAGAAAACTGTTACAAATTTTCCTCTGGCCCATTTAGTTGGGAAAGAAGCCGG
DCI01_0107_E09.b : xxxxxxxxxxxxxxxxxTTACAAATTTTCCTCAGGCCCATTTAGTTGGGAAAAAAGCCGG
20110601C-008912 : GAGAACTGCTTGTCTTTGGATGCCCAACTGCTGAAGATTAATAGCACAGACGATCTGGAA
---------+---------+---------+---------+---------+---------+ 681
AMP01_0070_H01.b : GAGAACTGCTTGTCTTTGGATGCCCCACTGCTGAAGATTAATAGCACAGACGATCTGGAA
AMP01_0027_C04.b : GAGAACTGCTTGTCTTTGGATGCCCAACTGCTGAAGATTAATAGCACAGACGATCTGGAA
AMP01_0069_A04.b : GAGAACTGCTTGTCNTTGGATGCCCCACTGCTGAAGATTAATAGCACAGACGATCTGGAA
AMP01_0025_E04.b : GAGAACTGCTTGTCTTTGGATGCCCAACTGCTGAAGATTAATAGCACAGACGATCTGGAA
AMP01_0033_C06.b : GAGAACTGCTTGTCTTTGGATGCCCAACTGCTGAAGATTAATAGCACAGACGATCTGGAA
AMP01_0006_C06.b : GAGAACTGCTTGTCTTTGGATGCCCAACTGCTGAAGATTAATAGCACAGACGATCTGGAA
DCI01_0107_E09.b : GAGAACTGCTTGTCTTTGGATGCCCAGCTGCTGAAGATTAATAGCACAGACGATCTGGAA
20110601C-008912 : TTCATCCAGCAAACCATC*GCCCATTCCAGTTTCCCATTCTGGATGGGGTTATCTCTGAG
---------+---------+---------+---------+---------+---------+ 740
AMP01_0070_H01.b : TTCATCCAGCAAACCATCCGCCCATTCCCATTTTCCAATCCGGATGGGGTTATCTCTGAG
AMP01_0027_C04.b : TTCATCCAGCAAACCATC*GTCCATTCCAGTTTCCCATTCTGGATGGGGTTATCTCTGAG
AMP01_0069_A04.b : TTCATCCCAGCAACCATC*GCCCATTCCAGTTNNNCCATCTGGATGGGGNTATCTCTGAA
AMP01_0025_E04.b : TTCATCCAGCAAACCATC*GCCCATTCCAGTTTCCCATTCTGGATGGGGGTATCTCTGAN
AMP01_0033_C06.b : TTCATCCAGCAAACCATC*GCCCATTCCAGTTTCCCATTCTGGATGGGGTTATCTCTGAG
AMP01_0006_C06.b : TTCATCCAGCAAACCATC*GCCCATTCCAGTTTCCCATTCTGGATGGGGTTATCTCTGAA
DCI01_0107_E09.b : TTCATCCAGCAAACCATC*GCCCATTCCAGTTTCCCATTCTGGATGGGGTTATCTCTGAG
20110601C-008912 : GAAACCCAACAACTCATGGCTCTGGGAGGACGGTACTCCTTTGATGCCCCACTTGTTTAG
---------+---------+---------+---------+---------+---------+ 800
AMP01_0070_H01.b : GAAAacccaccacttcatggctctggggaggacggtactcttttgatgcccccctttgtt
AMP01_0027_C04.b : GAAACCCA*CAACTCATGGCTCTGGGAGGACGGTACTCCTTTGATGCCCCACCTGTTTAG
AMP01_0069_A04.b : GAAAACCCAACACTCATGGCTCTGGNNAGACCGTACTCCTTTGATGCCCCACTTGTTaga
AMP01_0025_E04.b : GAAACCCAACAACTCATGGCTCTGGGAGGACGGTACTCNTTTGATGCCCCACTTGTT**A
AMP01_0033_C06.b : GAAACCCCCACACTCATGGCTCTGGGAGGGACGTACTCCTTTGATGCCCCACTTGTTTAG
AMP01_0006_C06.b : GAAACCCAACAACTCATGGCTCTGGGAGGACGGTACTCCTTTGATGCCCCACTTGTTTAG
DCI01_0107_E09.b : GAAACCCAACAACTCATGGCTCTGGGAGGACGGTACTCCTTTGATGCCCCACTTGTTTAG
20110601C-008912 : ACTCCAGGGAGCTGCTTCCCAAATGTATCCTTCAGGCACCTGTGCGTATATACACAGGGG
---------+---------+---------+---------+---------+---------+ 860
AMP01_0070_H01.b : aagacctccagggagctgcttcccaaatggaacccttccggccccggtgcctaaataccc
AMP01_0027_C04.b : ACTTCCAGGAGCTGCTTCCCCAATGTATCCTTCAGGCACCTGTGCGTATATACACAGGGG
AMP01_0069_A04.b : ctccaggagctgcttccaaatgtatccttcangcactgtgcgtaatacacaggggattgt
AMP01_0025_E04.b : GACTCCAGGAGCTGCTTCCC*AATGTATCCTTCAGGCACCTGTGCGTATATACACAGGGG
AMP01_0033_C06.b : ACTCCAGGGAGCTGCTTCCC*AATGTATCCTTCAGGCACCTGTGCGTATATACACAGGGG
AMP01_0006_C06.b : ACTCCAAGGAGCTGCTTCCCAAATGTATCCTTCGGGCACCTGTGCGTATATACACAGGGG
DCI01_0107_E09.b : ACTCCAGGGAGCTGCTTCCCAAATGTATCCTTCAGGCACCTGTGCGTATATACACAGGGG
20110601C-008912 : AATTGTTTTTGCTGAAAACTGCATTTTAAATGCATTCAGTATATGTCAGAAGAGGGCGAA
---------+---------+---------+---------+---------+---------+ 920
AMP01_0070_H01.b : agggaatttgttttgccgaaaactgcctttttaaagcctttccgaaatggccagaaaagg
AMP01_0027_C04.b : GAATTGTTTTtgctgaaaactgcattttaaatgcattcantatatgtcaaaaaagggcca
AMP01_0069_A04.b : tttgctgaaactgcatttaatgcattcgtaatgtcagagaaggcgatctctgagagccca
AMP01_0025_E04.b : AATTGNTTTTGCTGGAAACTGCATTTTAAATGCATTCAGTATATgtcaaagaagggccaa
AMP01_0033_C06.b : AATTTGTTTTGCTG*AAACTGCATTTTAAATGCATTCAGTATATGTcagaagaggtcgaa
AMP01_0006_C06.b : AATTGTTTTTGGCTAAAACTGCATTTTAAATGCATTCCGTATATGTcagaagaaggccaa
DCI01_0107_E09.b : AATTGTTTTTGCTGAAAACTGCATTTTAAATGCATTCAGTATATGTCAGAAGAGGGCGAA
20110601C-008912 : TCTCTTGAGAGCACAGTGAATTTGAAAGCTTTGGAAGAAAAGGAGAAGATCTTTGGATTC
---------+---------+---------+---------+---------+---------+ 980
AMP01_0070_H01.b : gccaatccccttgaaaccacgtggaatttaaagcctttgaaaaaaaaagaaaaaaaattt
AMP01_0027_C04.b : atctcctgaaacccagtggaatttgaagcttgggaaaaaaagaaaaaacctggaatcttt
AMP01_0069_A04.b : tgatttgaaagcttgaagaaaggagagatcttggatctttctgattnagctatactgtca
AMP01_0025_E04.b : tctcttgaaagccccatgaatttgaaaccttttgaagaaaaggaaaaaatctttgaaatc
AMP01_0033_C06.b : tctcttgagagcacagtgaatttgaaagcttttgaagaaaaagaaaagatctttgtattc
AMP01_0006_C06.b : tctcttgagagcaccgtgaaatttgaaacctttgaaaaaaaggaaaaaaatcttgggatc
DCI01_0107_E09.b : TCTCTTGAGAGCACAGTGAATTTGAAAGCTTTGGAAGAAAAGGAGAAGATCTTTGGATTC
20110601C-008912 : TTTTCTGGAATTTAAGCTATACTTGGTCACTTAAGTGCAAACCATGAAAGCCCTGACAAC
---------+---------+---------+---------+---------+---------+ 1040
AMP01_0070_H01.b : tggaattctttccgggaaattaacccaaccttggccccctaaggggccaacccggaaagc
AMP01_0027_C04.b : tccggaattaagccaaccttggcccctagtgcaaccatgaaagcccgacacggccggtgc
AMP01_0069_A04.b : ctaggcaacatgaagcctgacactgctgtgctctagatgccatcctaacgaacggccccc
AMP01_0025_E04.b : cttccgggaattaaccttaacttgccccttaagtgcaaacatgaaagccctaaacggccg
AMP01_0033_C06.b : tttctggaatttagctatacttggtccctaagtgcaaacatgaaagccctgacactgcct
AMP01_0006_C06.b : ttttccggaaatttaaccttaacttggtcccttaaggtgcaaacatggaaaccccggaaa
DCI01_0107_E09.b : TTTTCTGGAATTTAAGCTATACTTGGTCACTTAAGTGCAAACCATGAAAGCCCTGACAAC
20110601C-008912 : TGCCTGTTGCTCTATGAGTGCAGAACTCCTTAGCAGAGACTGGGCCTCAGCTACCTGACA
---------+---------+---------+---------+---------+---------+ 1100
AMP01_0070_H01.b : cccggaaaactgtcctgtttgctcttagaatgcccaatccccttaaggggagagtggccc
AMP01_0027_C04.b : tccttgaatccaaacccctaaaaaacggggcccactcccgaacttgggtaaaaaatttat
AMP01_0069_A04.b : ccccgcgctggtatcaatttaatctccttcctgggtccaacggcccaccccgccgcaaaa
AMP01_0025_E04.b : gttggcctagatgcaaaatcttaccaaaaatggccccacccaccgagctgggttaaaaag
AMP01_0033_C06.b : gttgctcttgaatgcaaactcctaacggagactggccccgcccctgaaggctggatacaa
AMP01_0006_C06.b : attgctgttgccctatggaggcaaaaatccttataaaaaaacggggccccacnaaccgga
DCI01_0107_E09.b : TGCCTGTTGCTCTATGAGTGCAGAACTCCTTAGCAGAGACTGGGCCTCAGCTACCTGACA
20110601C-008912 : GCTTGGTTATCAATAGTTTTAATTCTATCCCTTTCTCTCTGTGTTCCCTAGCGTGTCCCA
---------+---------+---------+---------+---------+---------+ 1160
AMP01_0070_H01.b : cttcaccaccctgaaacctttgttttn
AMP01_0027_C04.b : tcacccttcccgcgt
AMP01_0069_A04.b : taacccttcgtttaattaaaattggcaaggaggcaatttttccttcgttccaat
AMP01_0025_E04.b : ttaaatctacccttccccgggt
AMP01_0033_C06.b : aatttaattctccctttctctcgggtcccaaaggtccaagccccggccggcaaaantagc
AMP01_0006_C06.b : aaactggggtaaaaaaattttaatacaaccctttccctcgggggtccagaaaggaccaag
DCI01_0107_E09.b : GCTTGGTTATCAATAGTTTTAATTCTATCCCTTTCTCTCTGTGTTCCCTAGCGTGTCCCA
20110601C-008912 : AGCCCCCCTGCCTGCCATCAGTTAAGTCCCTTTCCTGTTTTCTATATTTCTAAGAACTTG
---------+---------+---------+---------+---------+---------+ 1220
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b : cccttctgtttctattctaaaagtgggcttagggggttaaatttttcccctggtccccgg
AMP01_0006_C06.b : ccccccgacggaccccataaaacccaatcctgctccaaaattacaaaaaacgtgtctttg
DCI01_0107_E09.b : AGCCCCCCTGCCTGCCATCAGTTAAGTCCCTTTCCTGTTTTCTATATTTCTAAGAACTTG
20110601C-008912 : TTGCTTAATGCAAGGTCGTAAA......................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b : attttaattccaatcaaaaaaatattttttt
AMP01_0006_C06.b : aaacggccaaaattttcctccatgttc
DCI01_0107_E09.b : TTGCTTAATGCAAGGTCGTAAAattttttctccttgggttctcctangcatttaatattt
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : ctgattttacatagaaacgtataatttattggggttaatcctaaaccctgtttggatgta
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : ccaaatgtttttatcccccccctggcactcaatgttttcccatatttgttgaacatggct
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : ctttttttccctatggtgtcctgcactttgtcaacattatgaactgcccggggcgttccg
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : aacccccctcggtcccttaacatcaaacccttgtaaccccccccggttatttttcccctt
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : taaaattttttgaaaaagtgaattcatgtggagattctccgccaaaaggttccttaacag
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : accaataccccttttcaaattttccgggggaccaaaaaggattcctagaaacgggccttc
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : cttcttccaaagggggataacccaccccccccccccccggcccggacattgttaatgggg
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : gctctctaaactcccacaacaaaaaaaaattttctctctcaaaaaaccgcccagattctt
20110601C-008912 : ............................................................
---------+---------+---------+---------+---------+---------+ 1242
AMP01_0070_H01.b :
AMP01_0027_C04.b :
AMP01_0069_A04.b :
AMP01_0025_E04.b :
AMP01_0033_C06.b :
AMP01_0006_C06.b :
DCI01_0107_E09.b : gggggaaaaaatcccccct