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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008965

Length: 1,017

Sequence [FASTA format sequence]
GGCTCTGGGC TTTCCATTGC AACCACCTTA AGCCAGGGTT GGTGTGGCTG CCTCTGGACA
GCGCTTCTCC CAGGAACTGG ACGGGGCTGT TCTCAGGTCC AGAAATGCCC TTGGTGTGTT
TGACAGACTT TCAGGACCAT GCACGGGAGC GGCTGTCTAA ATCAACATGG GATTTTATCG
AAGGAGGAGC AGATGCTTGC CTCACGCGGG ATGACAACGT CGCAGCATTT AAAAAAATCC
GCCTCCGTCC CCGGTACCTG AAAGACGTGT CAAAGGTGGA CACGAGAATC ACCATCCAAG
GCGAGGAGAT CAGTGCCCCC ATTTGCATCG CACCCATGGG TTTCCACTGC CTCGCCTGGC
CTGACGGAGA AATGAGCACA GCCAGAGCTG CCCGAGCAGC TGGCATCTGC TATGTCACCA
GCATGTATGC CAGCTGCAGC CTTGAAGACA TCGTTGGTAC TGCACCTGGG GGCCTGCGAT
GGTTCCAACT GTATGTGCAT CCAAACCGGC AGCTAAACAA ACAGCTGATC CAAAAGGTAG
AATCCCTGGG CTTCAAGGCT CTGGTGATCA CTGTGGATGT GCCCAAAATT GGCAATAGGC
GACATAACAT GGCAAACCAA GTGGACTTGC AAAAGACCTT ACTCCTGAAA GACCTTGGAT
TGTCTGCAAA GGGAAATTCA ATGCCCTATT TCCAGATGTC CCCCATTGAC CCATCCATTT
GCTGGGATGA TCTCTCCTGG TTTCAGAGCT TGACTCGTTT GCCCATCATC CTTAAGGGGA
TCTTGACCAA AGAGGATGCA GAGTTAGCTG TGAAGCACAA TGTCCATGGC ATCATTGTTT
CCAACCATGG TGGGAGGCAG CTTGATGAGG TTCCTGCTTC TATCGATGCC TTGTCCGAAG
TGGTGGCTGC TGTGAAAGGG AAATTGAAGT GTACCTGGAC GGAGGGATCC GAACAGGCAA
TGACGTGCTA AAGGCCCTGG CCTCGGGGGC TAATGCGTGT TTGTGGGGAG GCCGATC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHAO2hydroxyacid oxidase 2 [Homo sapiens]. 432e-129O
Contig/Assembly ProteinHAO2hydroxyacid oxidase 2 [Homo sapiens]. 432e-129O
Contig/Assembly ProteinHAO1hydroxyacid oxidase 1 [Homo sapiens]. 2262e-65O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHao2hydroxyacid oxidase 2 [Mus musculus]. 345e-103O
Contig/Assembly ProteinHao1hydroxyacid oxidase 1 [Mus musculus]. 2346e-68O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475814PREDICTED: similar to Hydroxyacid oxidase 2 (HAOX2) ((S)-2-hydroxy-acid oxidase, peroxisomal) (Long chain alpha-hydroxy acid oxidase) (Long-chain L-2-hydroxy acid oxidase) [Canis familiaris]. 436e-130O
Contig/Assembly ProteinLOC485774PREDICTED: similar to hydroxyacid oxidase 1 isoform 3 [Canis familiaris]. 2384e-69O
Contig/Assembly ProteinLOC485774PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 1 [Canis familiaris]. 2341e-67O
Contig/Assembly ProteinLOC485774PREDICTED: similar to Hydroxyacid oxidase 1 (HAOX1) (Glycolate oxidase) (GOX) isoform 2 [Canis familiaris]. 2191e-63O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinHAO2hydroxyacid oxidase 2 [Bos taurus]. 464e-138O
Contig/Assembly ProteinHAO1hydroxyacid oxidase 1 [Bos taurus]. 872e-17O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100522133PREDICTED: hydroxyacid oxidase 2-like [Sus scrofa]. 525e-157O
Contig/Assembly ProteinHAO1hydroxyacid oxidase 1, liver [Sus scrofa]. 2375e-69O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
KDN010008F10KDN01_0008_F10.bFS671813 
KDN010021A01KDN01_0021_A01.bFS672723 AK393202
KDN010024G03KDN01_0024_G03.bFS673034 
KDN010068E12KDN01_0068_E12.b  
KDN010071H02KDN01_0071_H02.bFS676118 
KDN010073C10KDN01_0073_C10.bFS676234 
KDN010087E09KDN01_0087_E09.bFS677347 
LVR010073A08LVR01_0073_A08.bBP441545 
LVRM10069F08LVRM1_0069_F08.bBP452652 AK346131

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
408C200.222WNCGC/R
T610.778TGC/C


Alignment:      TOP

20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
KDN01_0021_A01.b :
KDN01_0071_H02.b : n
LVRM1_0069_F08.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0024_G03.b : nnn
KDN01_0068_E12.b : nnccga
KDN01_0087_E09.b : n
LVR01_0073_A08.b : gttgtgtgttaactgcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0073_C10.b :
KDN01_0008_F10.b :
20110601C-008965 : .......GGCTCTGGGCTTTCCATTGCAACCACCTTAAGCCAGGGTTGGTGTGGCTGCCT
---------+---------+---------+---------+---------+---------+ 53
KDN01_0021_A01.b : cgttGGCTCTGGGCTTTCCATTGCAACCACCTTAAGCCAGGGTTGGTGTGGCTGCCT
KDN01_0071_H02.b : nnnncctgacgtggctcggatccattgcACCACCTTAAGCCAGGGTTGGTGTGGCTGCCT
LVRM1_0069_F08.b : xxxxxxxxxxxxxxxxxxxxxxttgcaaccaACCTTAAGCCAGGGTTGGTGTGGCTGCCT
KDN01_0024_G03.b : nnngctgctgtggctctggattccttgcaccACCTTAAGCCAGGGTTGGTGTGGCTGCCT
KDN01_0068_E12.b : tnnnnnncccctgcggctgctctggatgcaccaccttAGCCAGGGTTGGTGTGGCTGCCT
KDN01_0087_E09.b : nnnggctgcggttgctctggatccattgcaccaccttAGCCAGGGTTGGTGTGGCTGCCT
LVR01_0073_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCAGGGTTGGTGTGGCTGCCT
KDN01_0073_C10.b : nncctgcgtggctctggacttagccGGGTTGGTGTGGCTGCCT
KDN01_0008_F10.b : ncccttttnnnnnncctgcgttggcactagttggGTGGCTGCCT
20110601C-008965 : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
---------+---------+---------+---------+---------+---------+ 113
KDN01_0021_A01.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
KDN01_0071_H02.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
LVRM1_0069_F08.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
KDN01_0024_G03.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
KDN01_0068_E12.b : CTGGACCAGCCTTTAAG**GGAACTNGGAGGGGNTGNTCTCAGGGCCAGAACCTTTCTTG
KDN01_0087_E09.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
LVR01_0073_A08.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
KDN01_0073_C10.b : CTGGACAGCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
KDN01_0008_F10.b : CTGGAC*GCGCTTCTCCCAGGAACTGGACGGGGCTGTTCTCAGGTCCAGAAATGCCCTTG
20110601C-008965 : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
---------+---------+---------+---------+---------+---------+ 173
KDN01_0021_A01.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0071_H02.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
LVRM1_0069_F08.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0024_G03.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0068_E12.b : GGGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0087_E09.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
LVR01_0073_A08.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0073_C10.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
KDN01_0008_F10.b : GTGTGTTTGACAGACTTTCAGGACCATGCACGGGAGCGGCTGTCTAAATCAACATGGGAT
20110601C-008965 : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
---------+---------+---------+---------+---------+---------+ 233
KDN01_0021_A01.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0071_H02.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
LVRM1_0069_F08.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0024_G03.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0068_E12.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0087_E09.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
LVR01_0073_A08.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0073_C10.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
KDN01_0008_F10.b : TTTATCGAAGGAGGAGCAGATGCTTGCCTCACGCGGGATGACAACGTCGCAGCATTTAAA
20110601C-008965 : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
---------+---------+---------+---------+---------+---------+ 293
KDN01_0021_A01.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAACCACC
KDN01_0071_H02.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
LVRM1_0069_F08.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
KDN01_0024_G03.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
KDN01_0068_E12.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
KDN01_0087_E09.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
LVR01_0073_A08.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
KDN01_0073_C10.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
KDN01_0008_F10.b : AAAATCCGCCTCCGTCCCCGGTACCTGAAAGACGTGTCAAAGGTGGACACGAGAATCACC
20110601C-008965 : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
---------+---------+---------+---------+---------+---------+ 353
KDN01_0021_A01.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0071_H02.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
LVRM1_0069_F08.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0024_G03.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0068_E12.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0087_E09.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
LVR01_0073_A08.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0073_C10.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
KDN01_0008_F10.b : ATCCAAGGCGAGGAGATCAGTGCCCCCATTTGCATCGCACCCATGGGTTTCCACTGCCTC
20110601C-008965 : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
---------+---------+---------+---------+---------+---------+ 413
KDN01_0021_A01.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
KDN01_0071_H02.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCCGCTAT
LVRM1_0069_F08.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
KDN01_0024_G03.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCCGCTAT
KDN01_0068_E12.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
KDN01_0087_E09.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
LVR01_0073_A08.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
KDN01_0073_C10.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
KDN01_0008_F10.b : GCCTGGCCTGACGGAGAAATGAGCACAGCCAGAGCTGCCCGAGCAGCTGGCATCTGCTAT
20110601C-008965 : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
---------+---------+---------+---------+---------+---------+ 473
KDN01_0021_A01.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
KDN01_0071_H02.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
LVRM1_0069_F08.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
KDN01_0024_G03.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
KDN01_0068_E12.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
KDN01_0087_E09.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
LVR01_0073_A08.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
KDN01_0073_C10.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTAGTACTGCACCTGGGGGC
KDN01_0008_F10.b : GTCACCAGCATGTATGCCAGCTGCAGCCTTGAAGACATCGTTGGTACTGCACCTGGGGGC
20110601C-008965 : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
---------+---------+---------+---------+---------+---------+ 533
KDN01_0021_A01.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0071_H02.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
LVRM1_0069_F08.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0024_G03.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0068_E12.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0087_E09.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
LVR01_0073_A08.b : CTGCGATGGTTCCAACTGTATGTGCGTCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0073_C10.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
KDN01_0008_F10.b : CTGCGATGGTTCCAACTGTATGTGCATCCAAACCGGCAGCTAAACAAACAGCTGATCCAA
20110601C-008965 : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
---------+---------+---------+---------+---------+---------+ 593
KDN01_0021_A01.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0071_H02.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
LVRM1_0069_F08.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0024_G03.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0068_E12.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0087_E09.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
LVR01_0073_A08.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0073_C10.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
KDN01_0008_F10.b : AAGGTAGAATCCCTGGGCTTCAAGGCTCTGGTGATCACTGTGGATGTGCCCAAAATTGGC
20110601C-008965 : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
---------+---------+---------+---------+---------+---------+ 653
KDN01_0021_A01.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0071_H02.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
LVRM1_0069_F08.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0024_G03.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0068_E12.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0087_E09.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
LVR01_0073_A08.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0073_C10.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
KDN01_0008_F10.b : AATAGGCGACATAACATGGCAAACCAAGTGGACTTGCAAAAGACCTTACTCCTGAAAGAC
20110601C-008965 : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
---------+---------+---------+---------+---------+---------+ 713
KDN01_0021_A01.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
KDN01_0071_H02.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
LVRM1_0069_F08.b : CTTGGATTGTCTGTCAAGGGGAATTCAATGCCCTATTTCCAGATGTCCCCCATTGAACCA
KDN01_0024_G03.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
KDN01_0068_E12.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
KDN01_0087_E09.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
LVR01_0073_A08.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
KDN01_0073_C10.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
KDN01_0008_F10.b : CTTGGATTGTCTGCAAAGGGAAATTCAATGCCCTATTTCCAGATGTCCCCCATTGACCCA
20110601C-008965 : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
---------+---------+---------+---------+---------+---------+ 773
KDN01_0021_A01.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
KDN01_0071_H02.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
LVRM1_0069_F08.b : TTCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGC
KDN01_0024_G03.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
KDN01_0068_E12.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
KDN01_0087_E09.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
LVR01_0073_A08.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
KDN01_0073_C10.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
KDN01_0008_F10.b : TCCATTTGCTGGGATGATCTCTCCTGGTTTCAGAGCTTGACTCGTTTGCCCATCATCCTT
20110601C-008965 : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
---------+---------+---------+---------+---------+---------+ 833
KDN01_0021_A01.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
KDN01_0071_H02.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCGCAATGTCCATGGCATC
LVRM1_0069_F08.b :
KDN01_0024_G03.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCGCAATGTCCATGGCATC
KDN01_0068_E12.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
KDN01_0087_E09.b : AAGGGGGTCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
LVR01_0073_A08.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
KDN01_0073_C10.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
KDN01_0008_F10.b : AAGGGGATCTTGACCAAAGAGGATGCAGAGTTAGCTGTGAAGCACAATGTCCATGGCATC
20110601C-008965 : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
---------+---------+---------+---------+---------+---------+ 893
KDN01_0021_A01.b : ATTGTTTCCNACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
KDN01_0071_H02.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
LVRM1_0069_F08.b :
KDN01_0024_G03.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
KDN01_0068_E12.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
KDN01_0087_E09.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
LVR01_0073_A08.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
KDN01_0073_C10.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
KDN01_0008_F10.b : ATTGTTTCCAACCATGGTGGGAGGCAGCTTGATGAGGTTCCTGCTTCTATCGATGCCTTG
20110601C-008965 : TCCGAAGTGGTGGCTGCTGTGAAA**GGGAAATTGAAGTGTACCTGGACGGAGGGATCCG
---------+---------+---------+---------+---------+---------+ 951
KDN01_0021_A01.b : TCCGAAGTGGTGGCTGCTGTGAAA**GGGAAATTTGAGTGTACCTGGACGGAGGNATCCC
KDN01_0071_H02.b : TCCGAAGTGGTGGCTGCTGTGAAA**GGGAAAATTGAGTGTACCTGGACGGANGGATCCG
LVRM1_0069_F08.b :
KDN01_0024_G03.b : TCCGAAGTGGTGGCTGCTGTGAAA*GGAAAAATTGAAGTGTACCTGGACGGAGGGATCCG
KDN01_0068_E12.b : TCCGAAGTGGTGGCTGCTGTGAAAAGGGAAAATTGAAATGTACCTGGACGGAGGGATCCG
KDN01_0087_E09.b : TCCGAAGTGGTGGCTGCTNGTGAA*GGGAAAATTGAAGTGTACCTGGACGGAGGGATCCG
LVR01_0073_A08.b : TCCGAAGTGGTGCCTGCTGTGAAAGGGAAAAattgaaatgtacctgggacggaggggatc
KDN01_0073_C10.b : TCCGAAGTGGTGGCTGCTGTNGAA**GGGAAAATTGAGTGTACCTGGACGGAAGGATCCG
KDN01_0008_F10.b : TCCGAAGTGGTGGCTGCTGTGAAA**GGGAAATTTGAGTGTACCTGGACGGAGGGATCCG
20110601C-008965 : AACAGGCAATGACGTGCTAAAGGCCCTGGCC*TCGGGGGCTAATGCGTGTTTGTGGGGAG
---------+---------+---------+---------+---------+---------+ 1010
KDN01_0021_A01.b : GAACAGCAATGACGTGCTAAAGCCCTGGCCT*TCGG*GGCTAATGCGTGTTTGTGGGGAG
KDN01_0071_H02.b : AACAGGCAATGACGTGCTAAGGGCCctggcctcggggctaaatgcgtgtttgtggggagg
LVRM1_0069_F08.b :
KDN01_0024_G03.b : AAACAGCAATGACGTGCTAAAGCCCCTGGCC**TCGGGGCTAGTGCGTGTTTGTGGGGAG
KDN01_0068_E12.b : AACAGGCAATGACGTGCTAAAGGCCCTGcccctcggggctaagtgcttgtttgtggggag
KDN01_0087_E09.b : AACAGGCAATGACGTGCTAAAGGCCCTGGCC*TCGGGGGCTAGTGCGTGTTTGTGGGGAG
LVR01_0073_A08.b : cgaacagggcaatgaccttgctaaaaggccccgggccctcgggggcttaattgcctggtt
KDN01_0073_C10.b : AACAGGCAATGACGTGCTAAAGGCCCTGGCCCTCGGGGCTAAATGCCTGTTTGTGGGGAG
KDN01_0008_F10.b : AACAGGGCATGACGTGCTNAAGGCCtggcctcggggctagtgcgtgttgtggggagcccg
20110601C-008965 : GCCGATC.....................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : GCCGATCtgtgggggcttgctgcaggnntgacaccgtgtgagaagttttgacattttaag
KDN01_0071_H02.b : cgatcctgtggggcttgcctgcaaggtgaacacgtgttgaggaagtttgaacatttaaag
LVRM1_0069_F08.b :
KDN01_0024_G03.b : GCgatcctgtggggctttgctgcaggntgaaccggtgttgaagaagtttgaacattttaa
KDN01_0068_E12.b : gccgatcctgtgggggcttgcctccaagggtgaacacggtgttgagaaagttttaaactt
KDN01_0087_E09.b : GCcgatcctgtgggggcttgccntgcagggtgaaacacgtgttgaaggagttttgaacat
LVR01_0073_A08.b : tgtggggggaggcccaatcc
KDN01_0073_C10.b : GCcgatcctgtgggggcttgcctgcagggntgaacacggtgttgaagaagttttgaacat
KDN01_0008_F10.b : atctgtgggggcttgctgcagggtgacacggtgttgangaagttttgacattttaagatg
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : atgagtccaccttcaatgacctacagctgcggtctgtgccgaatcatcgggactgatcca
KDN01_0071_H02.b : atgagttcacacttcatgaccttaaggctgcggtcggtgccaaatcatcgggactgatcc
LVRM1_0069_F08.b :
KDN01_0024_G03.b : gatgagtccacacttcatgacccttcagcttgcgtcggtgccagatcatcgggactgatc
KDN01_0068_E12.b : ttaaagaatggaattcccactttcctgaacctttacagtttgccgttcggttgccaaaaa
KDN01_0087_E09.b : tttaagaatgagttcacctttcttgaaccttaaggctgcgcgtcgttgccgagatcatcg
LVR01_0073_A08.b :
KDN01_0073_C10.b : ttttaagaatgaggtccaacacttcatgacccttacaggctgccggtcggttgccgaaat
KDN01_0008_F10.b : aggtcacacttcatgaccctacagctggcgtcgntgccaaatcaatcggactgatcagtt
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : gtctcgaatgtgaaacgaaaagttctctttgccctttgcattcaccaacctattttctta
KDN01_0071_H02.b : agtctccgatgggagaacgaacagtctctttgccccttgccatcacccaccctaatttct
LVRM1_0069_F08.b :
KDN01_0024_G03.b : agttctcagatgtgagaagaaaagttctccttgccctttgcatcaccaaccctatttcta
KDN01_0068_E12.b : taatcgggaacctgatccctttcccccaattgggaaaaaagaaaagagttcttccttgcc
KDN01_0087_E09.b : ggactgatccagtcttcgaatgtgaaaacgaaaagttcctccttgcccttttgcatccaa
LVR01_0073_A08.b :
KDN01_0073_C10.b : caatcgggaactggatcagttctccgattggggaaacagaaaagcttctcctttgcccct
KDN01_0008_F10.b : cccaaatgggaaaagaaaagttctcttggcccttggcatcacccaccctaattcttaaag
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : aaggcaggtctctggcctccgccggaaagcggccctgccgaacctctgaaaaacttaaag
KDN01_0071_H02.b : aaatgccggtcccctggctcctgccggaaatgcgggcttgctgatcccccccgaaaaact
LVRM1_0069_F08.b :
KDN01_0024_G03.b : aaaggcaggtctctggccctgcagtaagccggcccttcggaacccctgaaaaacttttaa
KDN01_0068_E12.b : cccttttgcaattccccccacccttaattttcttaaaagggccgggctccttttggccct
KDN01_0087_E09.b : ccaccctaatttcttaaagggcaggccctttggctcctgccaggaatgcggccttgccga
LVR01_0073_A08.b :
KDN01_0073_C10.b : tgtgcattcaaccacacctttattttcctaaatgggccaggtcctcctggccctctggcc
KDN01_0008_F10.b : ggcggtccctggccccggcagaatgcgggctttgcgaactcccggagaaacttaaagcct
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : gcccctaagcgggaaccggggcctttggaattcagggctgacactgaaacccctaagaaa
KDN01_0071_H02.b : tttaagggccccaagggcgggaacgggggtcattttggatatcagggtctaaaaaata
LVRM1_0069_F08.b :
KDN01_0024_G03.b : ggcccaaggcggaacccgggtcatttggttctctgtttaacctgaacccctcaaaaattt
KDN01_0068_E12.b : ccggccatgaaaatggccgggcctttgccgaaaaccctcctctaaaa
KDN01_0087_E09.b : atctctctgaaaaacttttaagccctcaatgcgggaaacggggtctattgggaatctccg
LVR01_0073_A08.b :
KDN01_0073_C10.b : aggtaatgccgggttctgccggaaacctcccttgaagaaagttttaaaaggccctcaaaa
KDN01_0008_F10.b : ccaagagggaacggggtcatttgaattcatggttgaacttggaccccccaaaaatcggaa
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b : ttgtaaattctcaaaccccttaaaagggaaatttaaaaatggtccccggg
KDN01_0071_H02.b :
LVRM1_0069_F08.b :
KDN01_0024_G03.b : gaattccaaaaccccctaaaggggaataaaaattgttctttctgggaaaaaaaaaaaccc
KDN01_0068_E12.b :
KDN01_0087_E09.b : gcccaaccttggaccccctaaaagacttgtaatttcaaaacccccctctaaggggaaatt
LVR01_0073_A08.b :
KDN01_0073_C10.b : ggcgcgaaaacacgggggtcaatttggccaatcacagtggttgaaaccactgggaatccc
KDN01_0008_F10.b : tccaaaacacccctacaaggaaaaataaaatgttccgccgggagaataaaaaaacttcgg
20110601C-008965 : ............................................................
---------+---------+---------+---------+---------+---------+ 1017
KDN01_0021_A01.b :
KDN01_0071_H02.b :
LVRM1_0069_F08.b :
KDN01_0024_G03.b : ctgggaaaccgggggaaaactttt
KDN01_0068_E12.b :
KDN01_0087_E09.b : ttaaaattgatccggtgcgg
LVR01_0073_A08.b :
KDN01_0073_C10.b : cttcaaaaaaatttcgtggaatttcccagaaaccccccttttataaagagggaacaag
KDN01_0008_F10.b : ggaccggggtt