Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-008978

Sequence: [FASTA format sequence] GGCTGCCGTA GGAAGTGCCG GCGGTGGTGG CGCCACGTCC CCTGCCGCGG CGGGAGAGGG ATCGGCTGGG CCTTGGGGCG GTTGGCTATG GCCTTTACGC TGTACTCGCT GCTGCAGGCA GCCCTGCTCT GCGTCAATGC CATCGCCGTG CTGCACGAGG AGCGCTTCCT CAAGAACATT GGCTGGGGAA CAGACCAGGG AATTGGTGGA TTCGGAGAAG AGCCAGGAAT TAAATCTCAA CTAATGAATC TGATTCGATC TGTAAGAACC GTGATGAGAG TGCCATTGAT AATAGTAAAC TCAATTGCAA TTGTATTACT TTTACTATTT GGGTGAAGAT CCACAGAGGA AATGGAGACT CATCAGAGGA AGAGCTGCCA GCAGAAGTTA CTACTTCAGT CTTTGTTGGA ATATACATAT CTTAGCTGGC TCTCCTTGGA CTTGACAAAG TGTAAACCTG AGAGTAAAAC CAGAGTCCCT ATTTATCTGA TTTTTTAAAA TATTGCACTT ATGGTTTCAT TACAAAAAGG TCAGATCATC AGAGGCAGTA ACTATGCAGG ATTGGAATAC ATTTGATTGC TAACTTTTAA TAAAAGTTCA CGCTATGGTA AAGATTGTTT AATGGGTACA GGACTGTCAC TTATGTGTTA TTGGAGATTT TTCTCTTTCA CTTCTCAGGG ATGAATTTTT TTTTTCAAAG TTTTGAAGTT CCTTGTGACT TAGTTATGAT GTGAGAATGA TTATCCTTCT AGACAAAATT TAAACATTTT TTTAAAAAGT TATTACTACA TATAAAGTGA TTTTATTTTG AGCTCTTTGG TTAAATATTT TGTCTGTATA CTGTCTCATA TGAAAAATCA AATTTTTGCT AACTATTGAG GAGTAATACT CTCTGATTTC AGGGAGAATT CTAATTT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
IER3IP1 immediate early response 3-interacting protein 1 [Homo sapiens]. 160 1e-39 O

		Locus	Definition	Score	E value	FL
		IER3IP1	immediate early response 3-interacting protein 1 [Homo sapiens].	160	1e-39	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Ier3ip1 immediate early response 3-interacting protein 1 [Mus musculus]. 158 5e-39 O

		Locus	Definition	Score	E value	FL
		Ier3ip1	immediate early response 3-interacting protein 1 [Mus musculus].	158	5e-39	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC612379 PREDICTED: similar to immediate early response 3 interacting protein 1 [Canis familiaris]. 158 6e-39 O

		Locus	Definition	Score	E value	FL
		LOC612379	PREDICTED: similar to immediate early response 3 interacting protein 1 [Canis familiaris].	158	6e-39	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
IER3IP1 immediate early response 3-interacting protein 1 [Bos taurus]. 160 1e-39 O

LOC100296786 PREDICTED: immediate early response 3 interacting protein 1-like [Bos taurus]. 160 1e-39 O

LOC100296786 PREDICTED: immediate early response 3 interacting protein 1 [Bos taurus]. 160 1e-39 O

Locus	Definition	Score	E value	FL
IER3IP1	immediate early response 3-interacting protein 1 [Bos taurus].	160	1e-39	O
LOC100296786	PREDICTED: immediate early response 3 interacting protein 1-like [Bos taurus].	160	1e-39	O
LOC100296786	PREDICTED: immediate early response 3 interacting protein 1 [Bos taurus].	160	1e-39	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100521060 PREDICTED: immediate early response 3-interacting protein 1-like [Sus scrofa]. 160 7e-40 O

LOC100627305 PREDICTED: hypothetical protein LOC100627305, partial [Sus scrofa]. 110 1e-24 O

		Locus	Definition	Score	E value	FL
		LOC100521060	PREDICTED: immediate early response 3-interacting protein 1-like [Sus scrofa].	160	7e-40	O
		LOC100627305	PREDICTED: hypothetical protein LOC100627305, partial [Sus scrofa].	110	1e-24	O

Assembly Members: 9 TOP

Library Plate Loc. Read Name Accession Full Seq.

AMP01 0063 G05 AMP01_0063_G05.b BW959586
AMP01 0081 H05 AMP01_0081_H05.b BW960882
CBLT1 0089 A04 CBLT1_0089_A04.b HX218194
CLNT1 0090 B07 CLNT1_0090_B07.b FS663536
DCI01 0008 D03 DCI01_0008_D03.b DB791061
ILNT1 0021 H10 ILNT1_0021_H10.b HX228370
LVRM1 0034 E08 LVRM1_0034_E08.b CJ001344 AK232828
SPLT1 0024 C07 SPLT1_0024_C07.b HX241052
THY01 0053 B04 THY01_0053_B04.b BP160932 AK351638

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
75 G 5 0 0.714 W -
T 1 1 0.286
221 A 6 1 0.778 W N GAG/E
G 2 0 0.222 GGG/G
249 C 3 1 0.500 W S AAC/N
T 4 0 0.500 AAT/N

Alignment: TOP

20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b :                                                             
CBLT1_0089_A04.b :                                                             
DCI01_0008_D03.b : tttatgcgtacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b :                                                             
SPLT1_0024_C07.b :                                                             
AMP01_0081_H05.b :                                    naaaaagtattttxxxxxxxxxxxx
AMP01_0063_G05.b :                            nggagataaantaagggatacttxxxxxxxxxx


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LVRM1_0034_E08.b :                            nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0090_B07.b :                   tggtgtttnnnnnnnccgtcagcgnacgxxxxxxxxxxxxxx
CBLT1_0089_A04.b :                                 ttttggacagtagaggxxxxxxxxxxxx
DCI01_0008_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0053_B04.b :                                    txxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H10.b :                                                             
SPLT1_0024_C07.b :                                                             
AMP01_0081_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0063_G05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008978 : ...........................GGCTGCCGTAGGAAGTGCCGGCGGTGGTGGCGC
                   ---------+---------+---------+---------+---------+---------+ 33
LVRM1_0034_E08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxGGCTGCCGTAGGAAGTGCCGGCGGTGGTGGCGC
CLNT1_0090_B07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGCCGGCGGTGGAGGCGC
CBLT1_0089_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtaggaaGTGCCGGCGGTGGTGGCGC
DCI01_0008_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaGTGCCGGCGGTGGTGGCGC
THY01_0053_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxC
ILNT1_0021_H10.b :   nttatgcaggaagaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0024_C07.b :        nnnnggagatgagaggccgtagtatttnxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0081_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0063_G05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-008978 : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
                   ---------+---------+---------+---------+---------+---------+ 93
LVRM1_0034_E08.b : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTTGGGCGGTTGGCTATGGCC
CLNT1_0090_B07.b : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
CBLT1_0089_A04.b : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
DCI01_0008_D03.b : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGCCCTTTGGGCGGCTGGCTATGGCC
THY01_0053_B04.b : CACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
ILNT1_0021_H10.b : xACGTCCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
SPLT1_0024_C07.b : xxxxxgCCCTGCCGCGGCGGGAGAGGGATCGGCTGGGCCTTGGGGCGGTTGGCTATGGCC
AMP01_0081_H05.b : xxxxxxxxxxxxxxxxxxxxxAGAGGGATCGGCTGGGCCTCGGGGCGGTTGGCTATGGCC
AMP01_0063_G05.b : xxxxxxxxxxxxxxxxxxxxxAGAGGGATCGGCTGGGCCTCGGGGCGGTTGGCTATGGCC


20110601C-008978 : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
                   ---------+---------+---------+---------+---------+---------+ 153
LVRM1_0034_E08.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
CLNT1_0090_B07.b : TTTACGCTGTACTCGCTGCTGCATGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
CBLT1_0089_A04.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
DCI01_0008_D03.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
THY01_0053_B04.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
ILNT1_0021_H10.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
SPLT1_0024_C07.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
AMP01_0081_H05.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG
AMP01_0063_G05.b : TTTACGCTGTACTCGCTGCTGCAGGCAGCCCTGCTCTGCGTCAATGCCATCGCCGTGCTG


20110601C-008978 : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
                   ---------+---------+---------+---------+---------+---------+ 213
LVRM1_0034_E08.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
CLNT1_0090_B07.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCATGGAATTGGTGGATTC
CBLT1_0089_A04.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
DCI01_0008_D03.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
THY01_0053_B04.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
ILNT1_0021_H10.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
SPLT1_0024_C07.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
AMP01_0081_H05.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC
AMP01_0063_G05.b : CACGAGGAGCGCTTCCTCAAGAACATTGGCTGGGGAACAGACCAGGGAATTGGTGGATTC


20110601C-008978 : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCGATCTGTAAGAACCGTG
                   ---------+---------+---------+---------+---------+---------+ 273
LVRM1_0034_E08.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAACCTGATTCGATCTGTAAGAACCGTG
CLNT1_0090_B07.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCCATCTGAAAGAACCGTG
CBLT1_0089_A04.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCGATCTGTAAGAACCGTG
DCI01_0008_D03.b : AGAGAAGAGCCAGGAATTAAATCTCAACTAATGAACCTGATTCGATCTGTAAGAACCGTG
THY01_0053_B04.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCGATCTGTAAGAACCGTG
ILNT1_0021_H10.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCGATCTGTAAGAACCGTG
SPLT1_0024_C07.b : GGAGAAGAGCCAGGAATTAAATCTCAACTAATGAATCTGATTCGATCTGTAAGAACCGTG
AMP01_0081_H05.b : GGAGAAGGGCCAGGAATTAAATCTCAACTAATGAACCTGATTCGATCTGTAAGAACCGTG
AMP01_0063_G05.b : GGAGAAGGGCCAGGAATTAAATCTCAACTAATGAACCTGATTCGATCTGTAAGAACCGTG


20110601C-008978 : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
                   ---------+---------+---------+---------+---------+---------+ 333
LVRM1_0034_E08.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
CLNT1_0090_B07.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
CBLT1_0089_A04.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
DCI01_0008_D03.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
THY01_0053_B04.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
ILNT1_0021_H10.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
SPLT1_0024_C07.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
AMP01_0081_H05.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG
AMP01_0063_G05.b : ATGAGAGTGCCATTGATAATAGTAAACTCAATTGCAATTGTATTACTTTTACTATTTGGG


20110601C-008978 : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
                   ---------+---------+---------+---------+---------+---------+ 393
LVRM1_0034_E08.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
CLNT1_0090_B07.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
CBLT1_0089_A04.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
DCI01_0008_D03.b : TGAAGATCCACAGAGGAAATGGTGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
THY01_0053_B04.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
ILNT1_0021_H10.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
SPLT1_0024_C07.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
AMP01_0081_H05.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA
AMP01_0063_G05.b : TGAAGATCCACAGAGGAAATGGAGACTCATCAGAGGAAGAGCTGCCAGCAGAAGTTACTA


20110601C-008978 : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
                   ---------+---------+---------+---------+---------+---------+ 453
LVRM1_0034_E08.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
CLNT1_0090_B07.b : CTTCAATCTTTGTTGGAATATACATATCTTAACTGGCTCTCCTTGGACTTGACAAAGTGT
CBLT1_0089_A04.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
DCI01_0008_D03.b : CTTCAATCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
THY01_0053_B04.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
ILNT1_0021_H10.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
SPLT1_0024_C07.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
AMP01_0081_H05.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT
AMP01_0063_G05.b : CTTCAGTCTTTGTTGGAATATACATATCTTAGCTGGCTCTCCTTGGACTTGACAAAGTGT


20110601C-008978 : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
                   ---------+---------+---------+---------+---------+---------+ 512
LVRM1_0034_E08.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
CLNT1_0090_B07.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
CBLT1_0089_A04.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
DCI01_0008_D03.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGATTTTTTTAAAATATTGCACTTAT
THY01_0053_B04.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
ILNT1_0021_H10.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
SPLT1_0024_C07.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
AMP01_0081_H05.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT
AMP01_0063_G05.b : AAACCTGAGAGTAAAACCAGAGTCCCTATTTATCTGA*TTTTTTAAAATATTGCACTTAT


20110601C-008978 : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
                   ---------+---------+---------+---------+---------+---------+ 572
LVRM1_0034_E08.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
CLNT1_0090_B07.b : GGTTTCATTACAAAGAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
CBLT1_0089_A04.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
DCI01_0008_D03.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
THY01_0053_B04.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
ILNT1_0021_H10.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
SPLT1_0024_C07.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
AMP01_0081_H05.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT
AMP01_0063_G05.b : GGTTTCATTACAAAAAGGTCAGATCATCAGAGGCAGTAACTATGCAGGATTGGAATACAT


20110601C-008978 : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
                   ---------+---------+---------+---------+---------+---------+ 632
LVRM1_0034_E08.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
CLNT1_0090_B07.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
CBLT1_0089_A04.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
DCI01_0008_D03.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
THY01_0053_B04.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
ILNT1_0021_H10.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
SPLT1_0024_C07.b : TTGATTGCTAACTTTTAATAAAAGTTCACGCTATGGTAAAGATTGTTTAATGGGTACAGG
AMP01_0081_H05.b : TTGATTGCTAACTTTTAATAAAAGTTCATGCTATGGTAAAGATTGTTTAATGGGTACAGG
AMP01_0063_G05.b : TTGATTGCTAACTTTTAATAAAAGTTCATGCTATGGTAAAGATTGTTTAATGGGTACAGG


20110601C-008978 : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
                   ---------+---------+---------+---------+---------+---------+ 692
LVRM1_0034_E08.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
CLNT1_0090_B07.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
CBLT1_0089_A04.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
DCI01_0008_D03.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
THY01_0053_B04.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
ILNT1_0021_H10.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
SPLT1_0024_C07.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTTTTTT
AMP01_0081_H05.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAATTT*TTT
AMP01_0063_G05.b : ACTGTCACTTATGTGTTATTGGAGATTTTTCTCTTTCACTTCTCAGGGATGAAT*TTTTT


20110601C-008978 : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG
                   ---------+---------+---------+---------+---------+---------+ 752
LVRM1_0034_E08.b : TCTCAAAGTTTTGAAAGTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTT   
CLNT1_0090_B07.b : TTTCACAGTTTTGAAGTTCCTTGTGACTTAGTGATGATGTGAGAATGATTATCCTTCTAG
CBLT1_0089_A04.b : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG
DCI01_0008_D03.b : TTCAAA**GTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTTTCCCTCCAG
THY01_0053_B04.b : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG
ILNT1_0021_H10.b : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG
SPLT1_0024_C07.b : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG
AMP01_0081_H05.b : TTTCAAAGTTTTGAAGTTCCTTGTGANCTAGTTATGATGTGAGAATGATTATCCTTCTAG
AMP01_0063_G05.b : TTTCAAAGTTTTGAAGTTCCTTGTGACTTAGTTATGATGTGAGAATGATTATCCTTCTAG


20110601C-008978 : ACAAAATTTAAACATTTTTTTAAAAAGTTATTACTACATATAAAGTGATTTTATTTTGAG
                   ---------+---------+---------+---------+---------+---------+ 812
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : ACAAAATTTACACATTTCCTTAAGAAGTTATTACTACGTATAAAGTGATTTTATCTTGAG
CBLT1_0089_A04.b : ACAAAATTTAAACATTTTTTTAAAAAGTTATTACTACATATAAAGTGATTTTATTTTGAG
DCI01_0008_D03.b : AACAAATTTAAACTTTTTTTTAAAA*GTTATTCCTACATATAAAGTGATTTTATTTTGAG
THY01_0053_B04.b : ACAAAATTTAAACATTTTTTTAAAAAGTTATTACTACATATAAAGTGATTTTATTTTGAG
ILNT1_0021_H10.b : ACAAAATTTAAACATTTTTTTAAAAAGTTATTACTACATATAAAGTGATTTTATTTTGAG
SPLT1_0024_C07.b : ACAAAATTTTAACATTTTTTTAAAAAG*TATTACTACATATAAAGTGATTTTATTTTGAG
AMP01_0081_H05.b : ANCAAATTTNAACATTTTTTTAAAAAGTTATTACTACATATAAAGTGATTTTATTTTGAG
AMP01_0063_G05.b : ACAAAATTTAA*CATTTTTTTTAAAAGTTATTACTACATATAAAGTGATTTTTATTTGAG


20110601C-008978 : CTCTTTGGTTAAATATTTTGTCTGTATACTGTCTCATATGAAAAA*TCAAATTTTTGCTA
                   ---------+---------+---------+---------+---------+---------+ 871
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : CTCTTTGCGTGAATATTTTGTCTGAATACTGTCTCATATGAAACA*TCAAATTTTTGCat
CBLT1_0089_A04.b : CTCTTTGGTTAAATATTT*GTCTGTATACTGTCTCATATGAAAAA*TCAAATTTTTGCTA
DCI01_0008_D03.b : CTCCTTGGTTAAATATTTggccggtataccggctccaaaaaaaatcaattttttgcaaac
THY01_0053_B04.b : CTCTTTGGTTAAATATTTTGTCTGTATACTGTCTCATATGAAAAAATCAAATTTTTGCTA
ILNT1_0021_H10.b : CTCTTTGGTTAAATATTTTGTCTGTATACTGTCTCATATGAAAAA*TCAAATTTTTGCTA
SPLT1_0024_C07.b : CTCTTTG*TTAAATATTTTGTCTGTATACTGTCTCATATGAAAAA*ATCAATTTTTGCTA
AMP01_0081_H05.b : CTCTTTGGNTAAATATTT*GTCTGTATACTGTCTCATATGAAAAAatcaaattttttgct
AMP01_0063_G05.b : CTNCTTGANTAAATATTTTGTCTGTATACTGTCTCATATGAAAAA*TCAAATTTTTGCCT


20110601C-008978 : ACTATTGAGGAGTAATACTCTCTGATTTCAGGGAGAATTCTAATTT..............
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : acgtatgagggagtatactctctgacttcagggagactcgtaatttgtagtcagatatca
CBLT1_0089_A04.b : ACTATTGAGGAGTAatactctctgatttcagggagaattctaattttgtaagtcagatag
DCI01_0008_D03.b : tggtgaggaatattcctctcggattgcggagagatttctattttgaatcaaaaagcccac
THY01_0053_B04.b : ACTATTGAGGAGTAatactctctgatttcagggagaattcaaattttgaaagtcagaaag
ILNT1_0021_H10.b : ACTATTGAGGAATAATACTCTCTGATTTCAGGGAGAATTCTAATTTtttaagtcaaatag
SPLT1_0024_C07.b : ACTAATGAGGAGTAatactctctgaattcagggagaaatctatttttgtagtcaaatagt
AMP01_0081_H05.b : actnnatgagaggtatactctctgatttcaggganggatctaattttgtagtcagatatc
AMP01_0063_G05.b : ACTATTGAGGAGTAtactctctgatttcnggnaggattctattttgtagtcagatatcca


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : cnacgatgattgtgtttttaaggtagtcacgcattggtatttaataatgggccgcatgat
CBLT1_0089_A04.b : tcacacggatgaattgggtttttaagtttggtcaggcatttgttattttaataattggcc
DCI01_0008_D03.b : ggggattgggttttaaattggtccgccttttttttttttattggccggaggagaaaccaa
THY01_0053_B04.b : tccccacggatgattgggttttaaattttgttcagccttttgttattttaataattggcc
ILNT1_0021_H10.b : tcacacggatgaattgtgttttaaagtttgctcatgcatttgttattttaataatgggcc
SPLT1_0024_C07.b : cacacggatgattgggtttttaatttgttcaggcatttgttatttaataaatggcctgga
AMP01_0081_H05.b : ccaccgatgaatgtgttttagtttgttcagccattgtaattttataatggcctgatgatg
AMP01_0063_G05.b : cggatggatgtgttttaagttngtcatgcattggtaatttataatgggctgatgatgaga


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : gagaccgaatagatctacatagtccatggtaaagatactgggtaaaaattctatgccctt
CBLT1_0089_A04.b : tgaatgatgaaaccaaaatagtactactattgtccattggtaaaaaaaccgggtaaaaaa
DCI01_0008_D03.b : atatatccctttgtcattggaaaaattcgagaaaaaccttgtcctttaaaaggtggtttt
THY01_0053_B04.b : tgaatgatgaaaccaaaaaattacccaactattgtccattggtaaaaaaatctttgttaa
ILNT1_0021_H10.b : tgaatgatgaaaaccaaaatagtatctacatatgtccattgataaagaaatctggtgtaa
SPLT1_0024_C07.b : ggatgaaacccaaaaattatccctttgttcattgggaaaaaaatccggggaaaaaatcca
AMP01_0081_H05.b : agaccgatagtatctactatgtccatggtaaagatactgtgtaaaaatcatgccctttaa
AMP01_0063_G05.b : ccgaatntttcctccttgtccattggaaagaatacgggttaaaagtcattccttttaaca


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : taacatgttggttattttttcatccccttaacctccgggacggcaaaaaatccctcagcg
CBLT1_0089_A04.b : ttcaatgccttttaaaaaaggatgggttattttttacatccccataaaagcctacgggaa
DCI01_0008_D03.b : ttttcttcccgtaagccttgggcagccaaataccccttagggaggaaaaaaattttggga
THY01_0053_B04.b : aaaagtctaatccctttttaaacaatgaatggggttttttttttaccaaccacctaaaaa
ILNT1_0021_H10.b : aaaattctatgcccttttaaaacatggagggttaattttttacaatcagcaaaaaagccc
SPLT1_0024_C07.b : agcccttttaacaaggaggggtaatttttaaaccgcaaaaaccctcagggagcctccaaa
AMP01_0081_H05.b : catgatgggtattttacaatccgctaaagctacggaccgtctaaatatccccctaacgaa
AMP01_0063_G05.b : gggagggtttttttcaatcgctaaaagctagggacggcctaataaccccctccgcgtatg


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : gtacggtaaaagatttacgggaaaattcatcccaatcccattttgttgtgagaacaataa
CBLT1_0089_A04.b : ccgtcctaataaccacccttaaccggcaggtaaaaaaaaactttccgggaaaaattcccc
DCI01_0008_D03.b : ccttcccccactctttttttgttttaaacattagggggtatttcttctttctcccaagcg
THY01_0053_B04.b : acccctaaaaggaaacacctctaaaaataaaaccccccttttaactttc          
ILNT1_0021_H10.b : acaggaaccagtcctaaataatccccctaaactgaactggaaaaaaaaactttttcgtga
SPLT1_0024_C07.b : aaacccccttaacggacgggtaaaaaattttttgggaagttttacccccaaaacacaatt
AMP01_0081_H05.b : cggttaaaaacttttcttgaaattacctccccaacccctttggttttga          
AMP01_0063_G05.b : tataaaaatttttgggagattcccccccaacccctttttttttaaaacacatgggaggaa


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : gaagggtttgattttatttcgccaaaaaattcgggaaatggggaaatttgtttttttaaa
CBLT1_0089_A04.b : ccacaaaccaaatttcgttttttgaaacacaataagggagagtttttaattttctttctc
DCI01_0008_D03.b : cggggaaatgtttttgttttcctccaccccttctccacgcggagaaaaaatatggtttta
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b : aaccattcctcccccaaacacccaattttggtttttggaaataacaaattagggacggga
SPLT1_0024_C07.b : ttggttttgaaaaccattaggggggggtttgatatttttttcttcctcaaaaatttgggg
AMP01_0081_H05.b :                                                             
AMP01_0063_G05.b : ttatttttttctccccaacacccggcggaaaggtaattttttttcttccccccccctccc


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b : acccttttttacaaaggcgtggaaaaaaaaaaaaactttcggaaaatataattgggggg
CBLT1_0089_A04.b : caccaaaaaaattggggggaaaaattgatattttgttttttttttaaaaccaaaattttt
DCI01_0008_D03.b : atctctgggggggggggtttgtaaataatatacaaa                       
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b : tttggattcctcctttggccagacaaaaagaattctggggagaaaaaggaaaataatttg
SPLT1_0024_C07.b : aaaaaggttttttttttttttgtttaaaccaaattttatccaaattgtttggaaaaaaaa
AMP01_0081_H05.b :                                                             
AMP01_0063_G05.b : ct                                                         


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b :                                                             
CBLT1_0089_A04.b : atacaatatttgttgggaaaaaaaaaaaaaaaggttttttgaaaaactaaaatttagggg
DCI01_0008_D03.b :                                                             
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b : gttttaagctttgaccaccccaatttttatccccaaattgtcgttgtggaaaagatacaa
SPLT1_0024_C07.b : aaaaaagagttttttgaaataatatataaaggggggaagtcttttttgaaaccctaaata
AMP01_0081_H05.b :                                                             
AMP01_0063_G05.b :                                                             


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b :                                                             
CBLT1_0089_A04.b : ggagaagctcttttaaaaacat                                     
DCI01_0008_D03.b :                                                             
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b : ataagagagtttttt                                            
SPLT1_0024_C07.b : tttctccaaaaaaaaaaaaaaaaaaaaaaaaaaaccccgcccctggtggttaaaaaatag
AMP01_0081_H05.b :                                                             
AMP01_0063_G05.b :                                                             


20110601C-008978 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 917
LVRM1_0034_E08.b :                                                             
CLNT1_0090_B07.b :                                                             
CBLT1_0089_A04.b :                                                             
DCI01_0008_D03.b :                                                             
THY01_0053_B04.b :                                                             
ILNT1_0021_H10.b :                                                             
SPLT1_0024_C07.b : ggccacaaatata                                              
AMP01_0081_H05.b :                                                             
AMP01_0063_G05.b :