[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-009106

Length: 1,097

Sequence [FASTA format sequence]
TTTTCGGAGG AACTGGCCGC CGCCAATGGG AAGTGAGCGA GTGCCACGAA CAGGCCAATA
AGGAGGGAGC GGTGCGGGGT TTAAACCCGA GGCGGGGCCG GATTCCTCCC GGCGTGCTGC
GGAGGAACGG CTGTTAGCTA GTGGTGGCTT CAAGGTCCCC GGCTGGTCGG GGCTCCAGTG
CTCTGCTTCT CCCCTCTGAG CTGCTGCCTG GCCTGGTACA GAGGAAGTCA TGGCGCTCCG
GATCACCAGG AACACGAAAA TTAATGCTGA AAATAAGGCG AAGATCAGTA TGGCAGGCGC
AAAGCGCGTG CCTGTGGCCT CTGCTGCAAC CTCTAAGCCC GGACTGAGGC CAAGAACTGC
TCTTGGAGAC ATCGGTAACA AAGTCAGTGA ACAGCCACAG GCCAAACTGC CTCTGAAAAA
GGAAGCAAAA ACTTTAGCTG CTGGAAAAGT TGTTGCTAAA AAACTACCGA AACCTCTGGA
AAAGGCTCCT GTACCTGTAT TAGAGCCCCA GCCAGAGAGG GAGCCCGAGC CTGAACTGGA
GCCTGAACCA GAACCTGAGC CTGTTAAAGG AGAGAAACTT TCCCCTGAAC CTATTTTGGT
TGATACTCCC TCTCCAAGCC CCATGGAAAC ATCTGGCTGT GCCCCTGCAG AAGAATATTT
GTGTCAGGCT TTCTCTGATG TAATTCTTGC AGTGAATGAT GTGGATGCAG AAGATGGAGG
GGATCCAAAC CTTTGTAGTG AATATGTGAA AGATATCTAT GATTATCTGA GACAACTTGA
GGAAGAACAA GCAGTTAGAC CAAAATACCT ACTGGGTCGT GAAGTCACTG GAAACATGAG
AGCCATCCTA ATTGACTGGC TAGTGCAGGT TCAGATGAAA TTCAGGTTAC TACAGGAGAC
CATGTACATG ACAGTTTCCA TTATTGATCG GTTCATGCAG GATAATTGTG TGCCCAAGAA
GATGCTCCAA CTGGTTGGTG TCACTGCCAT GTTTATTGCC CAGCAATATG AAGAAATGTA
CCCTCCAGAA ATTGGTGACT TTTGCNTTGT GACTGACAAT ACTTACACTA AGTAACAAAT
CAGGCAGATG GAAATGA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCCNB1G2/mitotic-specific cyclin-B1 [Homo sapiens]. 424e-119O
Contig/Assembly ProteinCCNB2G2/mitotic-specific cyclin-B2 [Homo sapiens]. 1941e-49O
Contig/Assembly ProteinCCNA1cyclin-A1 isoform c [Homo sapiens]. 1134e-25O
Contig/Assembly ProteinCCNA1cyclin-A1 isoform b [Homo sapiens]. 1134e-25O
Contig/Assembly ProteinCCNA1cyclin-A1 isoform c [Homo sapiens]. 1134e-25O
Contig/Assembly ProteinCCNA1cyclin-A1 isoform a [Homo sapiens]. 1134e-25O
Contig/Assembly ProteinCCNA2cyclin-A2 [Homo sapiens]. 1111e-24O
Contig/Assembly ProteinCCNB3G2/mitotic-specific cyclin-B3 isoform 3 [Homo sapiens]. 1042e-22
Contig/Assembly ProteinCCNE1G1/S-specific cyclin-E1 [Homo sapiens]. 78.61e-14O
Contig/Assembly ProteinCCNE2G1/S-specific cyclin-E2 [Homo sapiens]. 77.42e-14O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCcnb1G2/mitotic-specific cyclin-B1 [Mus musculus]. 414e-116O
Contig/Assembly ProteinGm5593PREDICTED: g2/mitotic-specific cyclin-B1-like isoform 1 [Mus musculus]. 414e-116O
Contig/Assembly ProteinCcnb2G2/mitotic-specific cyclin-B2 [Mus musculus]. 1893e-48O
Contig/Assembly ProteinGm5593PREDICTED: g2/mitotic-specific cyclin-B1-like [Mus musculus]. 1155e-26O
Contig/Assembly ProteinCcna2cyclin-A2 [Mus musculus]. 1124e-25O
Contig/Assembly ProteinCcna1cyclin-A1 [Mus musculus]. 1102e-24O
Contig/Assembly ProteinCcnb3G2/mitotic-specific cyclin-B3 [Mus musculus]. 1032e-22
Contig/Assembly ProteinCcne1G1/S-specific cyclin-E1 [Mus musculus]. 796e-15O
Contig/Assembly ProteinCcne2G1/S-specific cyclin-E2 isoform 2 [Mus musculus]. 78.68e-15O
Contig/Assembly ProteinCcne2G1/S-specific cyclin-E2 isoform 1 [Mus musculus]. 78.68e-15O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC485338PREDICTED: similar to G2/mitotic-specific cyclin B1 isoform 1 [Canis familiaris]. 437e-122O
Contig/Assembly ProteinLOC608420PREDICTED: similar to G2/mitotic-specific cyclin B1 isoform 1 [Canis familiaris]. 437e-122O
Contig/Assembly ProteinLOC487020PREDICTED: similar to G2/mitotic-specific cyclin B1 [Canis familiaris]. 424e-119O
Contig/Assembly ProteinLOC485338PREDICTED: similar to G2/mitotic-specific cyclin B1 isoform 2 [Canis familiaris]. 3524e-97O
Contig/Assembly ProteinLOC608420PREDICTED: similar to G2/mitotic-specific cyclin B1 isoform 2 [Canis familiaris]. 3447e-95O
Contig/Assembly ProteinLOC489180PREDICTED: similar to G2/mitotic-specific cyclin B1 [Canis familiaris]. 2785e-75O
Contig/Assembly ProteinLOC481522PREDICTED: similar to G2/mitotic-specific cyclin B1 [Canis familiaris]. 2563e-68O
Contig/Assembly ProteinLOC485338PREDICTED: similar to G2/mitotic-specific cyclin B1 isoform 3 [Canis familiaris]. 2002e-51O
Contig/Assembly ProteinLOC478324PREDICTED: similar to cyclin B2 isoform 1 [Canis familiaris]. 1902e-48O
Contig/Assembly ProteinLOC478324PREDICTED: similar to cyclin B2 isoform 4 [Canis familiaris]. 1825e-46O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCCNB1G2/mitotic-specific cyclin-B1 [Bos taurus]. 429e-120O
Contig/Assembly ProteinCCNB2G2/mitotic-specific cyclin-B2 [Bos taurus]. 1933e-49O
Contig/Assembly ProteinCCNA2cyclin-A2 [Bos taurus]. 1111e-24O
Contig/Assembly ProteinCCNA1PREDICTED: cyclin A1 [Bos taurus]. 1103e-24O
Contig/Assembly ProteinCCNA1PREDICTED: cyclin A1 [Bos taurus]. 1103e-24O
Contig/Assembly ProteinCCNE1G1/S-specific cyclin-E1 [Bos taurus]. 80.13e-15O
Contig/Assembly ProteinCCNE1PREDICTED: cyclin E1 [Bos taurus]. 80.13e-15
Contig/Assembly ProteinCCNE2G1/S-specific cyclin-E2 [Bos taurus]. 78.21e-14O
Contig/Assembly ProteinCCND3G1/S-specific cyclin-D3 [Bos taurus]. 61.22e-09O
Contig/Assembly ProteinLOC100301247PREDICTED: cyclin A1-like [Bos taurus]. 58.98e-09O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCCNB1G2/mitotic-specific cyclin-B1 [Sus scrofa]. 459e-130O
Contig/Assembly ProteinCCNB2G2/mitotic-specific cyclin-B2 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinLOC100627814PREDICTED: cyclin-A1-like [Sus scrofa]. 1118e-25
Contig/Assembly ProteinCCNA1PREDICTED: cyclin-A1 [Sus scrofa]. 1118e-25O
Contig/Assembly ProteinCCNA2cyclin-A2 [Sus scrofa]. 1116e-25O
Contig/Assembly ProteinLOC100515638PREDICTED: g2/mitotic-specific cyclin-B3-like [Sus scrofa]. 1032e-22
Contig/Assembly ProteinCCNE1PREDICTED: g1/S-specific cyclin-E1 [Sus scrofa]. 80.12e-15O
Contig/Assembly ProteinCCNE2cyclin E2 [Sus scrofa]. 772e-14O
Contig/Assembly ProteinLOC100522141PREDICTED: g2/mitotic-specific cyclin-B2-like [Sus scrofa]. 68.66e-12O
Contig/Assembly ProteinLOC100517790PREDICTED: cyclin-O-like [Sus scrofa]. 61.21e-09O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010064E12AMP01_0064_E12.bBW959648 
BKFL10076G04BKFL1_0076_G04.bFS653161 
DCI010087D11DCI01_0087_D11.bDB797292 AK391478
MLN010031D08MLN01_0031_D08.bCJ010051 
OVRM10169H05OVRM1_0169_H05.bBP461698 
OVRT10139G12OVRT1_0139_G12.bHX237976 AK400710
SPLT10043H04SPLT1_0043_H04.bHX242584 
UTR010079H02UTR01_0079_H02.bBP464737 AK240474

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
491A200.250WNATA/I
G510.750GTA/V


Alignment:      TOP

20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRT1_0139_G12.b : nnaaagcatcannnnnnnngcgtctgcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0087_D11.b : nnnttatgatacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0043_H04.b :
UTR01_0079_H02.b :
BKFL1_0076_G04.b : nnnncctatttnnnnnnnggatatcttagggctxx
MLN01_0031_D08.b :
AMP01_0064_E12.b :
OVRM1_0169_H05.b :
20110601C-009106 : ...........................TTTTCGGAGGAACTGGCCGCCGCCAATGGGAAG
---------+---------+---------+---------+---------+---------+ 33
OVRT1_0139_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxTTTTCGGAGGAACTGGCCGCCGCCAATGGGAAG
DCI01_0087_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0043_H04.b :
UTR01_0079_H02.b : acttgg
BKFL1_0076_G04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0031_D08.b :
AMP01_0064_E12.b : nggaataatataagcgactctatgggctgctcccgcaccgxxxxxxxxxxxxxxxxxxxx
OVRM1_0169_H05.b :
20110601C-009106 : TGAGCGAGTGCCACGAACAGGCCAATAAGGAGGGAGCGGTGCGGGGTTTAAACCCGAGGC
---------+---------+---------+---------+---------+---------+ 93
OVRT1_0139_G12.b : TGAGCGAGTGCCACGAACAGGCCAATAAGGAGGGAGCGGTGCGGGGTTTAAACCCGAGGC
DCI01_0087_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0043_H04.b : nnnttgcggtacgaggccgtagtatttnxxxxxxxxxxxxxx
UTR01_0079_H02.b : tgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BKFL1_0076_G04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0031_D08.b : nnggctaggactataacxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0064_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0169_H05.b :
20110601C-009106 : GGGGCCGGATTCCTCCCGGCGTGCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
---------+---------+---------+---------+---------+---------+ 153
OVRT1_0139_G12.b : GGGGCCGGATTCCTCCCGGCGTGCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
DCI01_0087_D11.b : xxxxCCGGATTCCTCCCGGCGTGCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
SPLT1_0043_H04.b : xxxxxxxxxxxxxxxxxxxxGTGCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
UTR01_0079_H02.b : xxxxxxxxxxxxxxxccggcGTGCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
BKFL1_0076_G04.b : xxxxxxxxxxxxxxxxxxxcgtaCTGCGGAGGAACGGCTGTTAGCTAGTGGTGGCTTCAA
MLN01_0031_D08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCTGTTAGCTAGTGGTGGCTTCAA
AMP01_0064_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGGTGGCTTCAA
OVRM1_0169_H05.b : gagttgtcxxxxxxxxxxxxxx
20110601C-009106 : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
---------+---------+---------+---------+---------+---------+ 213
OVRT1_0139_G12.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
DCI01_0087_D11.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
SPLT1_0043_H04.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
UTR01_0079_H02.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
BKFL1_0076_G04.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
MLN01_0031_D08.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCCGGCC
AMP01_0064_E12.b : GGTCCCCGGCTGGTCGGGGCTCCAGTGCTCTGCTTCTCCCCTCTGAGCTGCTGCCTGGCC
OVRM1_0169_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCCCTCTGAGCTGCTGCCTGGCC
20110601C-009106 : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
---------+---------+---------+---------+---------+---------+ 273
OVRT1_0139_G12.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
DCI01_0087_D11.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
SPLT1_0043_H04.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
UTR01_0079_H02.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
BKFL1_0076_G04.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
MLN01_0031_D08.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
AMP01_0064_E12.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
OVRM1_0169_H05.b : TGGTACAGAGGAAGTCATGGCGCTCCGGATCACCAGGAACACGAAAATTAATGCTGAAAA
20110601C-009106 : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
---------+---------+---------+---------+---------+---------+ 333
OVRT1_0139_G12.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
DCI01_0087_D11.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
SPLT1_0043_H04.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
UTR01_0079_H02.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
BKFL1_0076_G04.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
MLN01_0031_D08.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
AMP01_0064_E12.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
OVRM1_0169_H05.b : TAAGGCGAAGATCAGTATGGCAGGCGCAAAGCGCGTGCCTGTGGCCTCTGCTGCAACCTC
20110601C-009106 : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
---------+---------+---------+---------+---------+---------+ 393
OVRT1_0139_G12.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
DCI01_0087_D11.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
SPLT1_0043_H04.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
UTR01_0079_H02.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
BKFL1_0076_G04.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
MLN01_0031_D08.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
AMP01_0064_E12.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
OVRM1_0169_H05.b : TAAGCCCGGACTGAGGCCAAGAACTGCTCTTGGAGACATCGGTAACAAAGTCAGTGAACA
20110601C-009106 : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
---------+---------+---------+---------+---------+---------+ 453
OVRT1_0139_G12.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
DCI01_0087_D11.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
SPLT1_0043_H04.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
UTR01_0079_H02.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
BKFL1_0076_G04.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
MLN01_0031_D08.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
AMP01_0064_E12.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
OVRM1_0169_H05.b : GCCACAGGCCAAACTGCCTCTGAAAAAGGAAGCAAAAACTTTAGCTGCTGGAAAAGTTGT
20110601C-009106 : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
---------+---------+---------+---------+---------+---------+ 513
OVRT1_0139_G12.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
DCI01_0087_D11.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
SPLT1_0043_H04.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
UTR01_0079_H02.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
BKFL1_0076_G04.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTATACCTGTATTAGAGCCCCAGCC
MLN01_0031_D08.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTATACCTGTATTAGAGCCCCAGCC
AMP01_0064_E12.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
OVRM1_0169_H05.b : TGCTAAAAAACTACCGAAACCTCTGGAAAAGGCTCCTGTACCTGTATTAGAGCCCCAGCC
20110601C-009106 : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
---------+---------+---------+---------+---------+---------+ 573
OVRT1_0139_G12.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACTTGAGCCTGTTAAAGGAGA
DCI01_0087_D11.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
SPLT1_0043_H04.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
UTR01_0079_H02.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
BKFL1_0076_G04.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
MLN01_0031_D08.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
AMP01_0064_E12.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
OVRM1_0169_H05.b : AGAGAGGGAGCCCGAGCCTGAACTGGAGCCTGAACCAGAACCTGAGCCTGTTAAAGGAGA
20110601C-009106 : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
---------+---------+---------+---------+---------+---------+ 633
OVRT1_0139_G12.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
DCI01_0087_D11.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
SPLT1_0043_H04.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
UTR01_0079_H02.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
BKFL1_0076_G04.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
MLN01_0031_D08.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
AMP01_0064_E12.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCCAGCCCCATGGAAACATC
OVRM1_0169_H05.b : GAAACTTTCCCCTGAACCTATTTTGGTTGATACTCCCTCTCCAAGCCCCATGGAAACATC
20110601C-009106 : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
---------+---------+---------+---------+---------+---------+ 693
OVRT1_0139_G12.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
DCI01_0087_D11.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
SPLT1_0043_H04.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
UTR01_0079_H02.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
BKFL1_0076_G04.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
MLN01_0031_D08.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
AMP01_0064_E12.b : TGGCTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
OVRM1_0169_H05.b : TG*CTGTGCCCCTGCAGAAGAATATTTGTGTCAGGCTTTCTCTGATGTAATTCTTGCAGT
20110601C-009106 : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
---------+---------+---------+---------+---------+---------+ 752
OVRT1_0139_G12.b : GAATGATGTGGATGCAAAAGATGGAGGGGATCCAAACCCTTTGTAGTGAATATGTGAAAG
DCI01_0087_D11.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
SPLT1_0043_H04.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
UTR01_0079_H02.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
BKFL1_0076_G04.b : GAATGATGTGGATGCGGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
MLN01_0031_D08.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
AMP01_0064_E12.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
OVRM1_0169_H05.b : GAATGATGTGGATGCAGAAGATGGAGGGGATCCAAACC*TTTGTAGTGAATATGTGAAAG
20110601C-009106 : ATATCTATGATTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAGACCAAAATACCTAC
---------+---------+---------+---------+---------+---------+ 812
OVRT1_0139_G12.b : ATATCTATGATTATCTGAGACACTTGGAGGAAGAACAAGCGGTTTAACCAAAAatactac
DCI01_0087_D11.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAANCAGCAGTTAGACCAAAATACCTAC
SPLT1_0043_H04.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAGACCAAAATACCTAC
UTR01_0079_H02.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAGACCAAAATACCTAC
BKFL1_0076_G04.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAAACAGCAGTTAGACCAAAATACCTAC
MLN01_0031_D08.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAGACCAAAATACCTAC
AMP01_0064_E12.b : ATATCTATGATTATCTGAGATCACTTGAGGAAGAAACAGCAGTTAGACC*AAATACCTAC
OVRM1_0169_H05.b : ATATCTATGATTATCTGAGACAACTTGAGGAAGAACAAGCAGTTAGACCAAAATACCTAC
20110601C-009106 : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTGCAGGTTC
---------+---------+---------+---------+---------+---------+ 872
OVRT1_0139_G12.b : tggggtcgggaagtcactggaaaacttgaaagcctcccaatttgactggctagtgcaggt
DCI01_0087_D11.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTA*TTGACTGGCTAGTGCAGGTTC
SPLT1_0043_H04.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTGCAGGTTC
UTR01_0079_H02.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTGCAGGTTC
BKFL1_0076_G04.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCCTATTGACTGGCTAGTGCAGGTTC
MLN01_0031_D08.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTGCAGGTTC
AMP01_0064_E12.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTACAGGTTC
OVRM1_0169_H05.b : TGGGTCGTGAAGTCACTGGAAACATGAGAGCCATCCTAATTGACTGGCTAGTGCAGGTTC
20110601C-009106 : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTATTGATCGGT
---------+---------+---------+---------+---------+---------+ 932
OVRT1_0139_G12.b : tcaaaagaaatttcggtttctaccgggaaaaccggttcctgaccgttttccatttttgat
DCI01_0087_D11.b : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTATTGATCGGN
SPLT1_0043_H04.b : AGATGAAATTCAGGTTACTACANGAGACCATGTACATGACAGTTTCCATTATTGATCGGT
UTR01_0079_H02.b : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTATTGATCGGT
BKFL1_0076_G04.b : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTTATGATCNGN
MLN01_0031_D08.b : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTATTGATCGGT
AMP01_0064_E12.b : AGATGAAATTCAGGTTACTACNAGAGAACATGTACATGACAGTTTCCATTttatgatcgn
OVRM1_0169_H05.b : AGATGAAATTCAGGTTACTACAGGAGACCATGTACATGACAGTTTCCATTATTGATCGGT
20110601C-009106 : TCATGCA*GGATAATTGTGTGCCCAAGAAGATGCTCCAACTGGTTGGTGTCACTGCCATG
---------+---------+---------+---------+---------+---------+ 991
OVRT1_0139_G12.b : cggttcacggcagaaaattgtggtgcccaaaaaaatgccccccacgggttgggttcccct
DCI01_0087_D11.b : TCATGCANGAATAATTGTGTGCCCAAGAAGATGCTCCCACTggttggtgtcactgccatg
SPLT1_0043_H04.b : TCATGCA*GGATAATTGTGTGCCCAAAAAGATGCTCCAACTGGGTGGTGTCACTGCCATG
UTR01_0079_H02.b : TCATGCA*GGATAATTGTGTGCCCAAGAAGATGCTCCAACTGGTTGGTGTCACTGCCATG
BKFL1_0076_G04.b : TCATGCA*NGATAATTGTGTGCCCcagagatgctccnactggntggtgcactgccatgtt
MLN01_0031_D08.b : TCATGCA*NGATAATTGTGTGCCCCAGAAGATGCTCCAACTGGTTGGTGTCACTGCCATG
AMP01_0064_E12.b : ntcatgcagaataatgtgtgcccaaaagatgctccnactgggtggtgtcactgccatgtt
OVRM1_0169_H05.b : TCATGCA*GGATAATTGTGTGCCCAAgaag
20110601C-009106 : TTTATTGCCCAGCAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTTGCNTTGTG
---------+---------+---------+---------+---------+---------+ 1051
OVRT1_0139_G12.b : ccccgttttttttccccccaaattaagaaaagttcccccccaaaaaattgggaatttccc
DCI01_0087_D11.b : tttattgcagcaaatatgaagaatgtcccctccgaaatggtgactttgccttgggactga
SPLT1_0043_H04.b : TTTATTgccagcaaatatgaaaaaatgtaccctccaaaaattggtgactttgcctttgtg
UTR01_0079_H02.b : TTTATTGCCAGCAAATATGAAAAAATGTACCCTCCcaaaaattggtgaatttgccttttg
BKFL1_0076_G04.b : tattgccagcaaatatgagaaatgtaccctcagaaatggtgactttgcctttggactgac
MLN01_0031_D08.b : TTTATTGCCCAGCAATATGAAGAAATGTACCCTCCAGAAATTGGTGACTTTTGCNTTGTG
AMP01_0064_E12.b : ttatgcccgcaantatgaagaaatgtaccctcaaaaaattgtgaacttgcctttgggact
OVRM1_0169_H05.b :
20110601C-009106 : ACTGACAATACTTACACTAAGTAACAAATCAGGCAGATGGAAATGA..............
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b : tttggggaggaaataccttcacccagatccaaaatgggggaaaagaaaataaaaattaaa
DCI01_0087_D11.b : catacttacccaagggcccaatcaggcaatggaaatgaaaatccaaaaaccttaattttt
SPLT1_0043_H04.b : actgacaatacttacctaattaccaattcggccaatggaaatgaaaattccaaaaccatt
UTR01_0079_H02.b : tgactgaaaaacctttaccctaattacccaattcgggcaaaatggaaatgaaaaattttt
BKFL1_0076_G04.b : atacttaccttagtaccaatcnggcaatggaatggagatctagagccttaattttgtctg
MLN01_0031_D08.b : ACTGACAATACTTACACTAAGTAACAAATCAGGCAGATGGAAATGAagattcctagagca
AMP01_0064_E12.b : gacaatctttccctaagtaccaaatccggcaaatgggaatggaaattccaaaaccttaaa
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b : aacctttaattttgtttgggggccccccccccccggttttttttggggaagctcaaattg
DCI01_0087_D11.b : gtctgggtcccctctaccctgattttctttggaagcctccaaaattggaagggtaagttt
SPLT1_0043_H04.b : aaattttgtcggggtcgcccttacccccggattttcttcgaaaacttccaaaatggaaag
UTR01_0079_H02.b : aaaaaccattaaattttttttttctggggtccccccttttcccccctggctttttttttt
BKFL1_0076_G04.b : gtgcccccctacccggctttcttccgaagctccaaattgaaaggtgagttagttccactt
MLN01_0031_D08.b : ttaaatttttgtctgggtcgccttctacccctgcattttcttcgaaagcatccaagattg
AMP01_0064_E12.b : tttttgtcggggtcccttcccccctgccttttcttcgaaacatcccaattgggaggggtg
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b : gggaggttgtgttgtttctctccttgtgccacaatttgggggaacatatgttggacacaa
DCI01_0087_D11.b : gaattcaactttggcaaattctgagggggccaatattttgaacccaaagggcccatttcc
SPLT1_0043_H04.b : gttgaggttaatttaaactttggccaaatatgaaggaaccaacaatgttgaaacaaaagg
UTR01_0079_H02.b : tttggaaaagaccatcccaaaaaattgggaaaaaaggtttaaagttttttaaaattttaa
BKFL1_0076_G04.b : tggcaaaattgagggacaccatttggaaccaatggggccttctcctccaataccaagagt
MLN01_0031_D08.b : gaaagttgatgttaatttactcccttggcaaattacggatggagctaattatgtgcactc
AMP01_0064_E12.b : agtttaatttactactttggcccaatatttagggacttaattttggtaaaacaaaaaggg
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b : agggggtcttcttcctctcaataacagcgaggattttttccctccaaaaaaatta
DCI01_0087_D11.b : cttcc
SPLT1_0043_H04.b : gggcccttttccttttcaaaattcaaagggagttttttgcctccccgaaaatttttgaaa
UTR01_0079_H02.b : cttactcctttttgggggcccaaaaaaaatttttcttgaaaagggggggaaaacctttaa
BKFL1_0076_G04.b : ttgtcttcctgaatctgtaaggagggcccccccccttcccgcacgaaaccctgggtcccg
MLN01_0031_D08.b : aaatggtgccctttcctctttctcaatccaccaggacctttgcctacccggagatcttgg
AMP01_0064_E12.b : gccttttccccctcccaaaac
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b :
DCI01_0087_D11.b :
SPLT1_0043_H04.b : gggggaaggaaccaatttcagccttatccgtgtaacgggagaatccctttgtgggtttca
UTR01_0079_H02.b : aaaaattatttattgtgttttttttg
BKFL1_0076_G04.b : gcaaaacggggagggtggcggttaaaagccccggaaccccccccctccgggggggtaaaa
MLN01_0031_D08.b : aatggggaagggacccactcccggcttctggctaactgaagatccttctgggtttccaac
AMP01_0064_E12.b :
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b :
DCI01_0087_D11.b :
SPLT1_0043_H04.b : caccgtgataaaaaatccgggggaaagggggtcttaaacttttttttaaaaaaatgcccc
UTR01_0079_H02.b :
BKFL1_0076_G04.b : nnnnnntttttttnnnttttaaaaannngtgggggacagacgctctctccnnnnnnnnnn
MLN01_0031_D08.b : ctggcaaaaatcccgggggaacggggttcaacccttatttcaaaaattgcccctctagtg
AMP01_0064_E12.b :
OVRM1_0169_H05.b :
20110601C-009106 : ............................................................
---------+---------+---------+---------+---------+---------+ 1097
OVRT1_0139_G12.b :
DCI01_0087_D11.b :
SPLT1_0043_H04.b : taacgccggaaaacccctccccccgaattcccttttaaattaacggggggg
UTR01_0079_H02.b :
BKFL1_0076_G04.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
MLN01_0031_D08.b : taaaaccacctccccgagattcactt
AMP01_0064_E12.b :
OVRM1_0169_H05.b :