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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-009257

Length: 992

Sequence [FASTA format sequence]
AACAGTGCCC AGCTTCCTAC AACAGCAGGT GGCATTCTGA CCTCAGCAGA GGCTGTGTTT
TTTCTCACAG GTACAGGGGA CCTCCGGCCC AGACGTCTGA AAAGAATTCG GAGCCCAGCC
AATTCCATGA GCAGCAAAAA CTCGGTGGAG CTGCAGAGGA TGGTGGCCCT CAGAGACGAG
GGCTGCCGAA ACCCTGGCTT TCAGAATGAC GAAATCTGCG TTGAAAGCCA GAACACATCA
GGAAACGACA ACTCATTAAG GAGCAGAGTT GTGCAAAACA GAGAGGATGA AAATGGAAAA
CAGGATGAAG AGCAAGTCAC CATTGAGGAG GATTCTCCAA GGAAGGAGGA AGAGGAGGAA
GATCAAGAGA CACATCAAAA AGGGTGCCTG GAAAACAAGT GCGGCACAGT TTATGATTTT
TACAGGGAAC ACAAAACAAC CCTTCAGTAT ATCCTCAGGG GCATTTTACT AGCAGGGTAC
CTGGCCCTGG TGATTGCAGC CTGCGTGCTG AACTTCCACA GAGCCCTTCC TCTTTTCGTG
ATCACAGTGG TCGTCATCTT CTTTGTGGTC TGGGATCGCT TCATGGCCAA ATATGAGTCG
CAGATCGATA AGTTCCTGTC TCCTGGCAGA AAGCTTCTGG ACAGCCACTG GTTCTGGCTG
AAGTGGGTGA CTTGGGGCTC CCTGATCCTG GGAGTTATTT TGTGGCTGAT CTTTGACACC
GCCAAACTGG GCCAACAGCA GCTCGTGTCC TTCGGTGGAC TCATAATGTA CATCAGCCTG
ACATTTCTGT TTTCCAAGCA CCCAACCAAA GTTTCCTGGA GACCCGTCTT TTGGGGAATT
GGGTTACAGT TTCTTCTTGG ACTTTTGATA CTAAGGACTA AACCTGGATT TATAGCTTTT
GATTGGTTGG GCAAACAAGT TCAGACGTTC TTGGAGTACA CCGACGCTGG CGCTTTGTTT
GTCTTCGGCG AGAAATATAC AGACCATTTT TT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC28A3solute carrier family 28 member 3 [Homo sapiens]. 3471e-95O
Contig/Assembly ProteinSLC28A3solute carrier family 28 member 3 [Homo sapiens]. 3471e-95O
Contig/Assembly ProteinSLC28A1sodium/nucleoside cotransporter 1 isoform 1 [Homo sapiens]. 1219e-28O
Contig/Assembly ProteinSLC28A2sodium/nucleoside cotransporter 2 [Homo sapiens]. 1187e-27O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSlc28a3solute carrier family 28 member 3 [Mus musculus]. 3153e-86O
Contig/Assembly ProteinGm14085solute carrier family 28 (sodium-coupled nucleoside transporter), member 2-like [Mus musculus]. 1241e-28O
Contig/Assembly ProteinSlc28a2sodium/nucleoside cotransporter 2 [Mus musculus]. 1224e-28O
Contig/Assembly ProteinSlc28a1solute carrier family 28, member 1 [Mus musculus]. 1226e-28O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC607728PREDICTED: similar to concentrative Na+-nucleoside cotransporter [Canis familiaris]. 2815e-76O
Contig/Assembly ProteinLOC609634PREDICTED: similar to solute carrier family 28 (sodium-coupled nucleoside transporter), member 1 [Canis familiaris]. 1211e-27
Contig/Assembly ProteinLOC476306PREDICTED: similar to concentrative Na+-nucleoside cotransporter [Canis familiaris]. 85.57e-17O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC28A3solute carrier family 28 member 3 [Bos taurus]. 401e-112O
Contig/Assembly ProteinSLC28A3PREDICTED: solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Bos taurus]. 401e-112O
Contig/Assembly ProteinSLC28A2PREDICTED: solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 [Bos taurus]. 1318e-31
Contig/Assembly ProteinSLC28A2PREDICTED: solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 [Bos taurus]. 1318e-31
Contig/Assembly ProteinSLC28A1sodium/nucleoside cotransporter 1 [Bos taurus]. 1271e-29O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100519381PREDICTED: solute carrier family 28 member 3-like [Sus scrofa]. 452e-127O
Contig/Assembly ProteinPKCNT1sodium/nucleoside cotransporter 1 [Sus scrofa]. 1241e-28O
Contig/Assembly ProteinLOC100522231PREDICTED: sodium/nucleoside cotransporter 1-like [Sus scrofa]. 1215e-28O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010055D08ITT01_0055_D08.bBW980886 
SMG010002E12SMG01_0002_E12.bFS713616 
SMG010013E06SMG01_0013_E06.bFS714384 
SMG010097B12SMG01_0097_B12.b  
TCH010049G01TCH01_0049_G01.bCJ026120 AK238133
UTR010051E06UTR01_0051_E06.bBP463947 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
273A200.333WSGTA/V
G400.667GTG/V


Alignment:      TOP

20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0049_G01.b : ggggggctaggactatgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0013_E06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SMG01_0097_B12.b : ngggcttttnnnttnggagtaaagcagcggntacgg
ITT01_0055_D08.b : nnnggatgaacaxx
SMG01_0002_E12.b :
UTR01_0051_E06.b : cctttagcgt
20110601C-009257 : ...............AACAGTGCCCAGCTTCCTACAACAGCAGGTGGCATTCTGACCTCA
---------+---------+---------+---------+---------+---------+ 45
TCH01_0049_G01.b : xxxxxxxxxxxxxxxAACAGTGCCCAGCTTCCTACAACAGCAGGTGGCATTCTGACCTCA
SMG01_0013_E06.b : nnnnnnnnnnxxxxxxxxxGTGCCCAGCTTCCTACAACAGCAGGTGGCATTCTGACCTCA
SMG01_0097_B12.b : ntcggaaattcctcnagcactggttggcctacgnaacagcagGGTGGCATTCTGACCTCA
ITT01_0055_D08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGTGGCATTCTGACCTCA
SMG01_0002_E12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxx
UTR01_0051_E06.b : gxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-009257 : GCAGAGG*CTGTG*TTTTTTCTCACAGGTACAGGG*GACCTCCGGCCCAGACGTCTGAAA
---------+---------+---------+---------+---------+---------+ 102
TCH01_0049_G01.b : GCAGAGG*CTGTG*TTTTTTCTCACAGGTACAGGG*GACCTCCGGCCCAGACGTCTGAAA
SMG01_0013_E06.b : GCAGAGG*CTGTG*TTTTTTCTCACAGGTACAGGG*GACCTCCGGCCCAGACGTCTGAAA
SMG01_0097_B12.b : GCAGAGGGCTGTGGTTTTTTCTCACAGGTACAGGGGGACCTCCGGCCCAGACGTCTGAAA
ITT01_0055_D08.b : GCAGAGG*CTGTG*TTTTTTCTCACAGGTACAGGG*GACCTCCGGCCCAGACGTCTGAAA
SMG01_0002_E12.b : xxxxxxxGCTGTG*TTTTTTCTCACAGGTACAGAG*GACCTCCGGCCCAGACGTCTGAAA
UTR01_0051_E06.b : xxxxxxxxxxxxxxggTTTTCTCACAGGTACAGGG*GACCTCCGGCCCAGACGTCTGAAA
20110601C-009257 : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
---------+---------+---------+---------+---------+---------+ 162
TCH01_0049_G01.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
SMG01_0013_E06.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
SMG01_0097_B12.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
ITT01_0055_D08.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
SMG01_0002_E12.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
UTR01_0051_E06.b : AGAATTCGGAGCCCAGCCAATTCCATGAGCAGCAAAAACTCGGTGGAGCTGCAGAGGATG
20110601C-009257 : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
---------+---------+---------+---------+---------+---------+ 222
TCH01_0049_G01.b : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
SMG01_0013_E06.b : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
SMG01_0097_B12.b : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
ITT01_0055_D08.b : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
SMG01_0002_E12.b : GCGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
UTR01_0051_E06.b : GTGGCCCTCAGAGACGAGGGCTGCCGAAACCCTGGCTTTCAGAATGACGAAATCTGCGTT
20110601C-009257 : GAAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTGCAAAACAGA
---------+---------+---------+---------+---------+---------+ 282
TCH01_0049_G01.b : GAAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTGCAAAACAGA
SMG01_0013_E06.b : GAAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTGCAAAACAGA
SMG01_0097_B12.b : GAAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTACAAAACAGA
ITT01_0055_D08.b : GAAGGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTACAAAACAGA
SMG01_0002_E12.b : GGAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTGCAAAACAGA
UTR01_0051_E06.b : GAAAGCCAGAACACATCAGGAAACGACAACTCATTAAGGAGCAGAGTTGTGCAAAACAGA
20110601C-009257 : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
---------+---------+---------+---------+---------+---------+ 342
TCH01_0049_G01.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
SMG01_0013_E06.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
SMG01_0097_B12.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
ITT01_0055_D08.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
SMG01_0002_E12.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
UTR01_0051_E06.b : GAGGATGAAAATGGAAAACAGGATGAAGAGCAAGTCACCATTGAGGAGGATTCTCCAAGG
20110601C-009257 : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
---------+---------+---------+---------+---------+---------+ 402
TCH01_0049_G01.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
SMG01_0013_E06.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
SMG01_0097_B12.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
ITT01_0055_D08.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
SMG01_0002_E12.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
UTR01_0051_E06.b : AAGGAGGAAGAGGAGGAAGATCAAGAGACACATCAAAAAGGGTGCCTGGAAAACAAGTGC
20110601C-009257 : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
---------+---------+---------+---------+---------+---------+ 462
TCH01_0049_G01.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
SMG01_0013_E06.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
SMG01_0097_B12.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
ITT01_0055_D08.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
SMG01_0002_E12.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
UTR01_0051_E06.b : GGCACAGTTTATGATTTTTACAGGGAACACAAAACAACCCTTCAGTATATCCTCAGGGGC
20110601C-009257 : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
---------+---------+---------+---------+---------+---------+ 522
TCH01_0049_G01.b : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
SMG01_0013_E06.b : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
SMG01_0097_B12.b : ATTT*ACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
ITT01_0055_D08.b : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
SMG01_0002_E12.b : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
UTR01_0051_E06.b : ATTTTACTAGCAGGGTACCTGGCCCTGGTGATTGCAGCCTGCGTGCTGAACTTCCACAGA
20110601C-009257 : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
---------+---------+---------+---------+---------+---------+ 582
TCH01_0049_G01.b : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
SMG01_0013_E06.b : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
SMG01_0097_B12.b : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
ITT01_0055_D08.b : GCCCTTCCTCTTTTCGTGATCACAATGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
SMG01_0002_E12.b : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
UTR01_0051_E06.b : GCCCTTCCTCTTTTCGTGATCACAGTGGTCGTCATCTTCTTTGTGGTCTGGGATCGCTTC
20110601C-009257 : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
---------+---------+---------+---------+---------+---------+ 642
TCH01_0049_G01.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
SMG01_0013_E06.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
SMG01_0097_B12.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
ITT01_0055_D08.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
SMG01_0002_E12.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
UTR01_0051_E06.b : ATGGCCAAATATGAGTCGCAGATCGATAAGTTCCTGTCTCCTGGCAGAAAGCTTCTGGAC
20110601C-009257 : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
---------+---------+---------+---------+---------+---------+ 702
TCH01_0049_G01.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
SMG01_0013_E06.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
SMG01_0097_B12.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
ITT01_0055_D08.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
SMG01_0002_E12.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGNGGCTCCCTGATCCTGGGAGTTATTCTG
UTR01_0051_E06.b : AGCCACTGGTTCTGGCTGAAGTGGGTGACTTGGGGCTCCCTGATCCTGGGAGTTATTTTG
20110601C-009257 : TGGCTGATCTTTGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTCCTTCGGTGGACTC
---------+---------+---------+---------+---------+---------+ 762
TCH01_0049_G01.b : TGGCTGATCTTTGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTCCTTCGGTGGACTC
SMG01_0013_E06.b : TGGCTGATCTTTGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTCCTTCGGTGGACTC
SMG01_0097_B12.b : TGGCTGATCTTCGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTCCCTTCGTGGACTC
ITT01_0055_D08.b : TGGCTGATCTTCGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTCCTTCGGTGGACTC
SMG01_0002_E12.b : TGGCTGATCTTTGACACCGCCNAACTGGGCCAACAGCAGCTCGTGTCCTTCGGTGGACTC
UTR01_0051_E06.b : TGGCTGATCTTTGACACCGCCAAACTGGGCCAACAGCAGCTCGTGTGCTTCGGTGGACTC
20110601C-009257 : ATAATGTACATCAGCCTGACATTTCTGTTTTCCAAGCACCCAACCAAAGTTTCCTGGAGA
---------+---------+---------+---------+---------+---------+ 822
TCH01_0049_G01.b : ATAATGTACATCAGCCTGACATTTCTGTTTTC*AAGCACCCAACCAAAGTTTCCTGGAGA
SMG01_0013_E06.b : ATAATGTACATCAGCCTGACATTTCTGTTTTCCAAGCACCCAACCCAAGTTTCCTGGAGG
SMG01_0097_B12.b : ATAATGTACATCAGCCTGACATTTCTGTTTTC*CAAGCACCCAACCAAGTTTCCTGGAAA
ITT01_0055_D08.b : ATAATGTACATCAGCCTGACATTTCTGTTTTCCAAGCACCCAACCAAAGTTTCCTGGAGA
SMG01_0002_E12.b : ATAATGTACATCAGCCTGACATTTCTGTTTTCCAAGCACCCAAACAAAGTTTCCTGGAGA
UTR01_0051_E06.b : ATAATGTACATCAGCCTGACATTTCTGTTTTCCAAGCACCCAACCAAAGTTTCCTGGAGA
20110601C-009257 : CCCGTCTTTTG*GGGAATTGGGTTACAGTTTCTTCTTGGACTTTTGATACTAAGGACTAA
---------+---------+---------+---------+---------+---------+ 881
TCH01_0049_G01.b : CCCGTCTTTTG*GGGAATTGGGGTACAGTTTCTTCTTGGACTTTTGATACTAAAGACTAA
SMG01_0013_E06.b : CCCGTCTTTTGGGGGAATTGGGTTACAGTCTCTCCTTGGAACTTTGATACTAAGGACTAA
SMG01_0097_B12.b : ACCGTCTTTTG*GGGAAATGGGTTACAGTTTCTTCTTGGACTTTTGAAACTAAGGACTAA
ITT01_0055_D08.b : CCCGTCTTTTG*GGGAATTGGGTTACAGTTTCTTCTTGGACTTTTGATACTAAGGACTAA
SMG01_0002_E12.b : CCCGTCTTTTG*GGGAATTGGGTTACAGTTTCTTCTTGGACTTTTGATACTAAAGACTAA
UTR01_0051_E06.b : CCCGTCTTTTG*GGGAATTGGGTTACAGTTTCTTCTTGGACTTTTGATACTAAGGACTAA
20110601C-009257 : ACCTGGATTTATAGCTTTTGATTGGTTGG*GCAAACAAGTTCAGACGTTCTTGGAGTACA
---------+---------+---------+---------+---------+---------+ 940
TCH01_0049_G01.b : ACTTGGATTTATAGCTTTTGAATGGTTGGGGCAAACAAGTTCAGACGTTCTTGGAGTACA
SMG01_0013_E06.b : ACCTGGATTTATAGCTTTTGATTGGGT*GGGCAAACAAGTCCAAACGTTCTTGGAATACA
SMG01_0097_B12.b : ACCTGGATTaaagcttttgatgggtggggcaacaattcaaacgttctggaatacacgacc
ITT01_0055_D08.b : ACCTGGATTTATAGCTTTTGATTGGGTGGGCNAAACA*GTTCAGACGTTCTTGGAGTACA
SMG01_0002_E12.b : ACCTGGATTTtagcttttgattggttgggcaacaagttcagagtttcttgaataccccaa
UTR01_0051_E06.b : ACCTGGATTTATAGCTTTTGATTGGTTGG*GCAAACAAGTTCAGACGTTCTTGGAGTACA
20110601C-009257 : CCGACGCTG*GCGCTTTGTTTGTCTTCGGCGAGAAATATACAGACCATTTTTT.......
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b : CCGACGCTG*GCGCTTTGTTtgtcctcggcgaaaaattacagacccattttttgcctttt
SMG01_0013_E06.b : CCaacccgggcgctttttttgtcttccgccagaaattaccaaacatttttttggctttaa
SMG01_0097_B12.b : ctgggctttggttgccttcggcaaaaatataccaacatttttttgatttaaggcccgcca
ITT01_0055_D08.b : CCGACGCTG*GCGCTTTGTTTGTCTTCGGCGAGA*ATATACAGACCATTTTTTgcattta
SMG01_0002_E12.b : cctggcgctttgttgtcttcggcgagaaataacagacaattttttggcttaaggtctggc
UTR01_0051_E06.b : CCGACGCTGGGCGCTTTGTTTGTCTTCGGCGAGAAATATACAGACCATTTTTTtgcattt
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b : aggtcccgcccaatcgggttttctttaacctgggaagtccatgctggactaccccgaatt
SMG01_0013_E06.b : gggcctgccaaccgggtttcctccccctgggaggccagggcggacacccccgaatgaacc
SMG01_0097_B12.b : accgggtttcttcacaccgggaaggccagccggactaccccgaatgagccagggtccttt
ITT01_0055_D08.b : ngggtctgccatcgtggttttctcgcactgtgatgtcctgctgtactacctcgaatgatg
SMG01_0002_E12.b : aaacgtggttttctcacacgggaagtccatgcgaacacctcgatttaagcatgggctttt
UTR01_0051_E06.b : aaagtcctgcccaatcttggttttcttccgccactgtgatgtccctggctgtactaccct
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b : gagcaatgggtccttaaaaggggggaagggaatggctgggcctatgggaaatctcccatg
SMG01_0013_E06.b : atgggcccttaaaagggggagggtaaggcatggcaagggaaacctcccacggaacggatt
SMG01_0097_B12.b : aaagtgggaagggaaggcttggacttgggaacatccccccggaaccggattgcttcgggg
ITT01_0055_D08.b : cantgggtcgttaaaaggtgggatgggtatgctagtgactatgggacatctctactgatc
SMG01_0002_E12.b : aaaaggtgggagggtatgctagtgccaatgaactctccacggaactcggattgctccggc
UTR01_0051_E06.b : cggattgatgccgttgggttcgtttaaaaagggggggaaggggtaaatgccaagtgactt
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b : aattcgtatt
SMG01_0013_E06.b : ccccggggaaaatttttgggaaaaaaatccccttggggccacaatttcccttttcccggt
SMG01_0097_B12.b : aatattttggaaaaaaaagtctcccggggggcccacattttccctttgccccggttgaat
ITT01_0055_D08.b : tgtagtgcttctgcaataatttatgaacgacggaatctcactgctggtccacatattacc
SMG01_0002_E12.b : aatatttattgaaaaaaaattcccctgcgggcccaaaattttcccttttcccgggttaaa
UTR01_0051_E06.b : atggggaaacttctccttactggaattctgtagtttgcttttcggggcaatatatttttt
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b :
SMG01_0013_E06.b : tgaacccccgcttgaacagggtgttcctcttgcgaaacctaagggaaaatttttggggac
SMG01_0097_B12.b : ccccccttttaaatcgggtttccacttggggaaaccttaggagaaattttttgggatccc
ITT01_0055_D08.b : tatgtcccggtttgaatcccccagctgacactgggtcctacatgccggacgcctagggaa
SMG01_0002_E12.b : ctccccccctggaaacggggttctcacatttcggaagccttaagggaaattttttgggga
UTR01_0051_E06.b : ttgggaacaaaaacaaaaatttcccccccggggccgggggtccccaaaacccattttttt
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b :
SMG01_0013_E06.b : ccccccccgaaaacctccgggggccccgcgcgggttttaattttggggagaaaacaaacc
SMG01_0097_B12.b : ccccccgaaaattccgaagggcgccgggcacgggttttaaatttttgggaggaaaaaaca
ITT01_0055_D08.b : aattctttgggattcccccccgggaacttcccttggggccccggcccgggttttaatttt
SMG01_0002_E12.b : atccccccccctaaaaactctcttaggggcacccggcccggtgttttatattttgtgggg
UTR01_0051_E06.b : ttccccccctaatttgttccccccccccggggtgtcctcgtgggaaa
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b :
SMG01_0013_E06.b : cccaggggggaagagggggggtccccccccaggagcctctccccgaaaaaaaaacacccc
SMG01_0097_B12.b : aaaccccaaacccaaaaagaaggttttatctcccccggaaaggagacctctctctcggga
ITT01_0055_D08.b : tggcgagaaaaacaaaacctaaggcggaaggaagggttgagctccgcccaagggccccct
SMG01_0002_E12.b : gaaaacaaaaaaacccccaagagcgaaagagaagggggggggaccccccccacgaagaga
UTR01_0051_E06.b :
20110601C-009257 : ............................................................
---------+---------+---------+---------+---------+---------+ 992
TCH01_0049_G01.b :
SMG01_0013_E06.b : gcttttcacccgagt
SMG01_0097_B12.b : aaacaaaaaattccccgcctgttttaaaaccccgtagaa
ITT01_0055_D08.b : tccgggaaacagaaataaccgccgtttt
SMG01_0002_E12.b : gccctcttctt
UTR01_0051_E06.b :