Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-009313

Sequence: [FASTA format sequence] GTCTTGTCCG CCCCGCCTCC GGACTGCCCT CCACACCGCC TGATTGCATT TCTGGCCTCG CCGTGTTAGC CCCAACTGAG GGCCGGGAGC AAAGCCTTGC GAAGACCGGA GGGCGCGGGT ACCTCTGCTC CCGGCCATGT CTGGCTGTCA CGCTCCAGAG GGAGACTGTG GCTCGCGGCA ATGCCTCGCG CAGGACAAGG AACATCCACG GTACCTGATC CCAGAGCTTT GCAAACAGTT TTACCATTTG GGCTGGGTCA CTGGCACTGG AGGAGGAATC AGCTTGAAGC ATGGCAATGA AATCTACATT GCTCCTTCAG GAGTACAAAA GGAACGGATT CAGCCTGAAG ATATGTTTGT GTGTGACATC GATGAACAGG ACATAAGTGG ACCTCCACCG CATAAGAACC TGAAGAAAAG CCAGTGTACG CCTCTTTTCA TGAATGCTTA CACAATGAGA GGAGCAGGTG CTGTGATTCA CACCCACTCT AAAGCTGCTG TCATGGCCAC CCTTCTCTTC CCAGGAAGGG AGTTTAAAAT TACACATCAA GAGATGATCA AAGGAATAAA GAAATGTACC TCGGGAGGGT ATTACAGATA TGATGACATG TTAGTAGTCC CCATTATTGA GAACACACCT GAGGAGAAGG ACCTCAAGGA GAGAATGGCC AGGGCAATGA ATGAATACCC AGACTCCTGC GCCGTGCTCG TCAGACGGCA CGGAGTCTAC GTCTGGGGAG AGACGTGGGA GAAGGCCAAA ACCATGTGTG AGTGTTACGA CTATTTGTTC GATGTTGCCG TATCAATGAA GAAAGTAGGA CTGGACCCTA CACAGCTTCC TGTTGGAGAA AATGGAATTG TCTAAGCCAA GTGGAAGTTT ATGATATACA GAGACAAAGC TTAATTATTA CTTAAATGAC ATGACTTTTT TAACAAACTG AAAATTTCCA TGAAGCTATT GATTTGTCCC TAAATATTGG CCCAAACCCT GGATTTTATT TGCTTAAATT TCTGGTATTT TTAAATGACC AATACAATGG AAAAAAAATT TTTTTTAAAT GAATGAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA A

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
APIP probable methylthioribulose-1-phosphate dehydratase [Homo sapiens]. 480 e-136 O

		Locus	Definition	Score	E value	FL
		APIP	probable methylthioribulose-1-phosphate dehydratase [Homo sapiens].	480	e-136	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Apip probable methylthioribulose-1-phosphate dehydratase [Mus musculus]. 476 e-134 O

		Locus	Definition	Score	E value	FL
		Apip	probable methylthioribulose-1-phosphate dehydratase [Mus musculus].	476	e-134	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC475943 PREDICTED: similar to APAF1 interacting protein [Canis familiaris]. 385 e-114 O

		Locus	Definition	Score	E value	FL
		LOC475943	PREDICTED: similar to APAF1 interacting protein [Canis familiaris].	385	e-114	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
APIP probable methylthioribulose-1-phosphate dehydratase [Bos taurus]. 481 e-136 O

		Locus	Definition	Score	E value	FL
		APIP	probable methylthioribulose-1-phosphate dehydratase [Bos taurus].	481	e-136	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100525733 PREDICTED: probable methylthioribulose-1-phosphate dehydratase-like [Sus scrofa]. 512 e-145 O

		Locus	Definition	Score	E value	FL
		LOC100525733	PREDICTED: probable methylthioribulose-1-phosphate dehydratase-like [Sus scrofa].	512	e-145	O

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

ITT01 0074 B12 ITT01_0074_B12.b BW982571 AK398862
MLN01 0051 A02 MLN01_0051_A02.b CJ011573
SMG01 0076 E10 SMG01_0076_E10.b FS719848 AK397576
SPLT1 0085 C09 SPLT1_0085_C09.b HX245815
UTR01 0008 E12 UTR01_0008_E12.b BP171989 AK239894
UTR01 0080 B03 UTR01_0080_B03.b BP463029 AK240477

SNPs: 4 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
430 G 4 0 0.667 W S ACG/T
T 2 0 0.333 ACT/T
583 A 4 0 0.667 W S TCA/S
G 2 0 0.333 TCG/S
646 A 2 0 0.333 W S GAA/E
G 4 0 0.667 GAG/E
709 A 3 0 0.500 W S CTA/L
C 3 0 0.500 CTC/L

Alignment: TOP

20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
SMG01_0076_E10.b : nnggggtatttnnnnggataaagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0074_B12.b :                                                      nnttgat
SPLT1_0085_C09.b :                                                      nnccgcg
UTR01_0080_B03.b :                                           tttxxxxxxxxxxxxxxx
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b :                                                             


20110601C-009313 : .......GTCTTGTCCGCCCCGCCTCCGGACTGCCCTCCACACCGCCTGATTGCATTTCT
                   ---------+---------+---------+---------+---------+---------+ 53
SMG01_0076_E10.b : xxxxxxxGTCTTGTCCGCCCCGCCTCCGGACTGCCCTCCACACCGCCTGATTGCATTTCT
ITT01_0074_B12.b : caacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxttGCATTTCT
SPLT1_0085_C09.b : gtacacgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGCATTTCT
UTR01_0080_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0008_E12.b :        ccttttggtgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0051_A02.b :                 nnnnggctagtactatgacxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-009313 : GGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGGG
                   ---------+---------+---------+---------+---------+---------+ 113
SMG01_0076_E10.b : GGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGGG
ITT01_0074_B12.b : GGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGAACTGAGGG
SPLT1_0085_C09.b : GGCCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGGG
UTR01_0080_B03.b : xxxCTCGCCGTGTTAGCCCCAACTGAGGGCCGGGAGCAAAGCCTTGCGAAGACCGGAGGG
UTR01_0008_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCTTGCGAAGACCGGAGGG
MLN01_0051_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCTTGCGAAGACCGGAGGG


20110601C-009313 : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGCT
                   ---------+---------+---------+---------+---------+---------+ 173
SMG01_0076_E10.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGCT
ITT01_0074_B12.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCATGCTCCAGAGGGAGACTGTGGCT
SPLT1_0085_C09.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTAGCT
UTR01_0080_B03.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGCT
UTR01_0008_E12.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGCT
MLN01_0051_A02.b : CGCGGGTACCTCTGCTCCCGGCCATGTCTGGCTGTCACGCTCCAGAGGGAGACTGTGGCT


20110601C-009313 : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
                   ---------+---------+---------+---------+---------+---------+ 233
SMG01_0076_E10.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
ITT01_0074_B12.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
SPLT1_0085_C09.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
UTR01_0080_B03.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
UTR01_0008_E12.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA
MLN01_0051_A02.b : CGCGGCAATGCCTCGCGCAGGACAAGGAACATCCACGGTACCTGATCCCAGAGCTTTGCA


20110601C-009313 : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
                   ---------+---------+---------+---------+---------+---------+ 293
SMG01_0076_E10.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
ITT01_0074_B12.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
SPLT1_0085_C09.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
UTR01_0080_B03.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
UTR01_0008_E12.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG
MLN01_0051_A02.b : AACAGTTTTACCATTTGGGCTGGGTCACTGGCACTGGAGGAGGAATCAGCTTGAAGCATG


20110601C-009313 : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
                   ---------+---------+---------+---------+---------+---------+ 353
SMG01_0076_E10.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
ITT01_0074_B12.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
SPLT1_0085_C09.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
UTR01_0080_B03.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
UTR01_0008_E12.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA
MLN01_0051_A02.b : GCAATGAAATCTACATTGCTCCTTCAGGAGTACAAAAGGAACGGATTCAGCCTGAAGATA


20110601C-009313 : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
                   ---------+---------+---------+---------+---------+---------+ 413
SMG01_0076_E10.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
ITT01_0074_B12.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
SPLT1_0085_C09.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
UTR01_0080_B03.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
UTR01_0008_E12.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA
MLN01_0051_A02.b : TGTTTGTGTGTGACATCGATGAACAGGACATAAGTGGACCTCCACCGCATAAGAACCTGA


20110601C-009313 : AGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
                   ---------+---------+---------+---------+---------+---------+ 473
SMG01_0076_E10.b : AGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
ITT01_0074_B12.b : AGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
SPLT1_0085_C09.b : AGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
UTR01_0080_B03.b : AGAAAAGCCAGTGTACTCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
UTR01_0008_E12.b : AGAAAAGCCAGTGTACGCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG
MLN01_0051_A02.b : AGAAAAGCCAGTGTACTCCTCTTTTCATGAATGCTTACACAATGAGAGGAGCAGGTGCTG


20110601C-009313 : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT
                   ---------+---------+---------+---------+---------+---------+ 533
SMG01_0076_E10.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT
ITT01_0074_B12.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT
SPLT1_0085_C09.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT
UTR01_0080_B03.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTATCTTCCCAGGAAGGGAGT
UTR01_0008_E12.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT
MLN01_0051_A02.b : TGATTCACACCCACTCTAAAGCTGCTGTCATGGCCACCCTTCTCTTCCCAGGAAGGGAGT


20110601C-009313 : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCGGGAGGGTATT
                   ---------+---------+---------+---------+---------+---------+ 593
SMG01_0076_E10.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTATT
ITT01_0074_B12.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTATT
SPLT1_0085_C09.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTATT
UTR01_0080_B03.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCGGGAGGGTATT
UTR01_0008_E12.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCAGGAGGGTATT
MLN01_0051_A02.b : TTAAAATTACACATCAAGAGATGATCAAAGGAATAAAGAAATGTACCTCGGGAGGGTATT


20110601C-009313 : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGACC
                   ---------+---------+---------+---------+---------+---------+ 653
SMG01_0076_E10.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGACC
ITT01_0074_B12.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGACC
SPLT1_0085_C09.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGACC
UTR01_0080_B03.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAAAAGGACC
UTR01_0008_E12.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAGAAGGACC
MLN01_0051_A02.b : ACAGATATGATGACATGTTAGTAGTCCCCATTATTGAGAACACACCTGAGGAAAAGGACC


20110601C-009313 : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTCA
                   ---------+---------+---------+---------+---------+---------+ 713
SMG01_0076_E10.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTAGTCA
ITT01_0074_B12.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTAGTCA
SPLT1_0085_C09.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTCA
UTR01_0080_B03.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTCA
UTR01_0008_E12.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTAGTCA
MLN01_0051_A02.b : TCAAGGAGAGAATGGCCAGGGCAATGAATGAATACCCAGACTCCTGCGCCGTGCTCGTCA


20110601C-009313 : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAGT
                   ---------+---------+---------+---------+---------+---------+ 773
SMG01_0076_E10.b : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAGGGC*AAAACCATGTGTGAGT
ITT01_0074_B12.b : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAGT
SPLT1_0085_C09.b : GACGGCACGGTGTCTACGTCTGGGGAGAGACGTGNGAGAAGGCCAAAACCATGTGTGAGT
UTR01_0080_B03.b : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAGT
UTR01_0008_E12.b : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAGT
MLN01_0051_A02.b : GACGGCACGGAGTCTACGTCTGGGGAGAGACGTGGGAGAAGGCCAAAACCATGTGTGAGT


20110601C-009313 : GTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACAC
                   ---------+---------+---------+---------+---------+---------+ 833
SMG01_0076_E10.b : GTTACGACTANTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACAC
ITT01_0074_B12.b : GTTACGACTATTTGTTCGATGTTGCCGTATNCATGAAGAAAGTANGACTGGACCCTACAC
SPLT1_0085_C09.b : GTTACGACTATTTGTTCGATGTTGCCGTATNCATGAAGAAAGTANGACTGGACCCTACAC
UTR01_0080_B03.b : GTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACAC
UTR01_0008_E12.b : GTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACAC
MLN01_0051_A02.b : GTTACGACTATTTGTTCGATGTTGCCGTATCAATGAAGAAAGTAGGACTGGACCCTACAC


20110601C-009313 : AGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATATACAGAG
                   ---------+---------+---------+---------+---------+---------+ 893
SMG01_0076_E10.b : AGCTTCCTGTTGGAGAAAtgggaatgtctaagcaagtggaagttatgatatacgagacca
ITT01_0074_B12.b : AGCTTCCTGTTGGGAGAAATGGAATTGTCTAAGCAAAGTGGAAGTTTATGATATACAGAG
SPLT1_0085_C09.b : AGCTTCCTGTTGGAGAAATGGAATTTGTCTAGCCAAAGTGG*AGTTTATGATATACAGAG
UTR01_0080_B03.b : AGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATATACAGAG
UTR01_0008_E12.b : AGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATAT     
MLN01_0051_A02.b : AGCTTCCTGTTGGAGAAAATGGAATTGTCTAAGCCAAGTGGAAGTTTATGATATACAGAG


20110601C-009313 : ACAAAGCTTAATTATTACTTAAATGACATGACTTTTT*TAACAAACTGAAAATTTCCATG
                   ---------+---------+---------+---------+---------+---------+ 952
SMG01_0076_E10.b : agcttaattatacttaaatgacttgactttttaaacaactgaaaattccatgaagccatt
ITT01_0074_B12.b : ACAAAGCTTAATTATTACTTTAATGACATGACTTTTT*Taacaaacttgaaatttcatgg
SPLT1_0085_C09.b : ACAAAGCTTATTTAT*ACTTAAATGACATGACTTTTT*TAACAAACTGAAAATTTTCATG
UTR01_0080_B03.b : ACAAAGCTTAATTATTACTTAAATGACATGACTTTTTTTAACCAACTGAAAATTTCCATG
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : ACAAAGCTTAATTATTACTTAAATGACATGACTTTTTTTAACAAACTGAAAATTTCCATG


20110601C-009313 : AAGCTATTGATTTGTCCCTAAATATTGGCCCAAACCCTGGATTTTATTTGCTTAAATTTC
                   ---------+---------+---------+---------+---------+---------+ 1012
SMG01_0076_E10.b : aattggcataantatggccagaactgaatttatttgctaattctggaatttaaggcaaaa
ITT01_0074_B12.b : agctattgatttgtcactaaatattgcacagacactggattttatttgcttaaaatcttg
SPLT1_0085_C09.b : AAGCTATTGGATTGTCACTTAATATTGcacagacactgaattttattgcttaaatcctgg
UTR01_0080_B03.b : AAGCTATTGATTTGTCCCTAAATATTGGCCCAAACCCTGGATTTTATTTGCTTAAATTTC
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : AAGCTATTGATTTGTCACTAAATATTGcacagacactgggattttatttgcttatantct


20110601C-009313 : TGGTATTTTTAAATGACCAATACAATGGAAAAAAAATTTTTTTTAAATGAATGAAAAAAA
                   ---------+---------+---------+---------+---------+---------+ 1072
SMG01_0076_E10.b : catggataaaattttaatgaaaaaaaaaaaaaaggccagtggccgactgcggccggcccc
ITT01_0074_B12.b : ggattttaaaggaccataccatgggattaaatttttaatattgaaaaaaaaaaaaaaaag
SPLT1_0085_C09.b : aattttaatgacaatacatgaataaaatttttttatgaanaanaanaananananaaaaa
UTR01_0080_B03.b : TGGTATTTTTAAATGACCAATACAATGGAAAAAAAATTTTTTTTAAATGAATGaaaaaaa
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : tgtaaatttaaatgacaatacaatggaataaaatttttataatgaananannnnnnnnan


20110601C-009313 : AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.....................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : tctaattccctgggggccaaattacgtaccccttttgaaaagggccctagggggccaata
ITT01_0074_B12.b : ggccaatgtgcctcaaactgcaaggtccggccctctctaaaatttccctcgaaggggcca
SPLT1_0085_C09.b : aaaaaaaaaaaaaaanttttcggggcccaaaatttcttttgtgggcggcattgttctcct
UTR01_0080_B03.b : aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggccccccttggt
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : nnnnnnaannnnnannnnannaaaaaaaggcccctgtgctcaactgcagtcccggcgctc


20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : aacgggcgggccttttttaaccggcgggaaaatttttggtttttgaaaaacttttggggg
ITT01_0074_B12.b : actttacgcgtaaccgcttttctggaaaaaggggcccctaaggggagccaattaaaacta
SPLT1_0085_C09.b : atgggagaatatttggccattagaaaaccttctttgtttttggaacacccctttttggga
UTR01_0080_B03.b : ggccccaaacttcgccggggcccccggccccccctcttaaaaaaattttcccccccccgg
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : ctaattaccctaaggggccaacttaacctacccactttttgaaaaatggtcccaaagtga


20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : gaatgtgaacccccaaatttcgccgggaaaaatttttggaggtgaaccccccccgccgaa
ITT01_0074_B12.b : agcacgggcccctctttttaaactcttggacgggaaaactgcaacctgggaatttttgga
SPLT1_0085_C09.b : aaaaaaacctttttttatttaaccattacttcttttaacccttaaaccccgaaaatttta
UTR01_0080_B03.b : ggggggcccccccaaacccttttatccccccccacacccccccccccgtctttttttttt
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : ggtttaaagccagggccgggcgtcttttaaccctctgctggaaactccacctgggacttt


20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : atttccgatataaaaaaaccgcggttttgttttataaccgggtgcccccccctttttccc
ITT01_0074_B12.b : aagaacctacctctgggggggcaaaaatgtggaactccctccaca              
SPLT1_0085_C09.b : aaccccttcttttattttttgtctttcgggggaagaattttttttccaaaaaacaccacc
UTR01_0080_B03.b : tttttttgtgttaacaaaaaag                                     
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : gaaggacctcttctgggtggcaattggaacccccccaaatttagcccaggaaataaattt


20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : cttgtgtttacccccccaaattttttttnnnaaattttttttttttttttttgaggggac
ITT01_0074_B12.b :                                                             
SPLT1_0085_C09.b : ccggaaggggttttttttccccccccttcccccct                        
UTR01_0080_B03.b :                                                             
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b : agggtaagtgtaacccgcacgggcccttt                              


20110601C-009313 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1111
SMG01_0076_E10.b : ccagatcttgctnnnnnt                                         
ITT01_0074_B12.b :                                                             
SPLT1_0085_C09.b :                                                             
UTR01_0080_B03.b :                                                             
UTR01_0008_E12.b :                                                             
MLN01_0051_A02.b :