Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-009370

Sequence: [FASTA format sequence] GGGCACCGGC CCACCCCCAC GCTGGGTCCT GTCACTCCCG AGATCTGCAA ACAGGACATT GTCTTCGATG GCATCTCTCA GATCCGCGGC GAGATCTTCT TCTTCAAGGA CCGGTTCATC TGGCGGACAG TGACACCACG TGACAAGCCC ATGGGGCCCC TGCTGGTGGC CACATTCTGG CCTGAGCTCC CGGAAAAGAT CGATGCTGTG TACGAGGCCC CACAGGAGGA GAAGGCTGTG TTCTTTGCAG GGAATGAGTA CTGGGTCTAT TCAGCCAGCA CCCTGGAGAG AGGGTACCCC AAGCCGCTGA CCAGCCTGGG GCTTCCGCCT GATGTCCAGA AAGTGGATGC TGCCTTTAAC TGGAGCAAGA ACAAGAAGAC ATACATCTTC GCTGGAGACA AGTTCTGGAG GTACAATGAA GTGAAGAAGA AGATGGATCC TGGCTTCCCC AAGCTCATTG CAGACGCCTG GAATGCCATC CCGGATAACC TGGACGCCGT GGTGGACCTG CAGGGCGGGG GTCACAGCTA CTTCTTCAAG GGCGCGTATT ACCTGAAGTT GGAGAACCAA AGTCTGAAGA GCGTGAAGTT CGGAAGCATC AAATCCGACT GGCTGGGCTG CTGAGCTGGC TCCACCTCCC CCAGGGCCTG CCTCTCCATC GCCTTCTGCA CACCGGGCCC TGGGTGCCAG GGGAGGACCC GGCTGGACCT GGCAGCCCTC AGCTCTGTAG TTAATCAGCC TTCTCACCCC CACCTGGTAA TTTAAGAAAC CGCAGAGTGG CTCTGCCCTG TGCTCACGGA AAGGTGCTGA TCGTACCCCG CCCAGGTGCC CCTCCCCCCT CTGTACCTCA CCAGCCCTCC AGAGCACCCC CAAAGTGATG CTTTGATATT CCCTATGCAG CTCTGCCTTG GGCTGCCCTG GTGCTGCCAC ACTTTAAGCT CTTCTCCTTC CACAACCTTC TGTGGCTTAC AGCACCCTTG GAGCCAAAAG AGACTGTCTC GGGAGGGC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
MMP2 72 kDa type IV collagenase isoform b [Homo sapiens]. 431 e-121

MMP2 72 kDa type IV collagenase isoform a preproprotein [Homo sapiens]. 431 e-121

MMP10 stromelysin-2 preproprotein [Homo sapiens]. 155 7e-38

MMP1 interstitial collagenase isoform 1 preproprotein [Homo sapiens]. 154 9e-38

MMP1 interstitial collagenase isoform 2 [Homo sapiens]. 154 9e-38

MMP3 stromelysin-1 preproprotein [Homo sapiens]. 154 9e-38

MMP24 matrix metalloproteinase-24 preproprotein [Homo sapiens]. 150 2e-36

MMP16 matrix metalloproteinase-16 [Homo sapiens]. 148 7e-36

MMP17 matrix metalloproteinase-17 preproprotein [Homo sapiens]. 145 4e-35

MMP8 neutrophil collagenase preproprotein [Homo sapiens]. 143 2e-34

Locus	Definition	Score	E value
MMP2	72 kDa type IV collagenase isoform b [Homo sapiens].	431	e-121
MMP2	72 kDa type IV collagenase isoform a preproprotein [Homo sapiens].	431	e-121
MMP10	stromelysin-2 preproprotein [Homo sapiens].	155	7e-38
MMP1	interstitial collagenase isoform 1 preproprotein [Homo sapiens].	154	9e-38
MMP1	interstitial collagenase isoform 2 [Homo sapiens].	154	9e-38
MMP3	stromelysin-1 preproprotein [Homo sapiens].	154	9e-38
MMP24	matrix metalloproteinase-24 preproprotein [Homo sapiens].	150	2e-36
MMP16	matrix metalloproteinase-16 [Homo sapiens].	148	7e-36
MMP17	matrix metalloproteinase-17 preproprotein [Homo sapiens].	145	4e-35
MMP8	neutrophil collagenase preproprotein [Homo sapiens].	143	2e-34

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Mmp2 72 kDa type IV collagenase precursor [Mus musculus]. 427 e-120

Mmp10 stromelysin-2 precursor [Mus musculus]. 157 1e-38

Mmp3 stromelysin-1 preproprotein [Mus musculus]. 154 8e-38

Mmp24 matrix metalloproteinase-24 [Mus musculus]. 150 2e-36

Mmp16 matrix metalloproteinase-16 precursor [Mus musculus]. 148 7e-36

Mmp17 matrix metalloproteinase-17 precursor [Mus musculus]. 146 2e-35

Mmp14 matrix metalloproteinase-14 [Mus musculus]. 140 2e-33

Mmp15 matrix metalloproteinase-15 precursor [Mus musculus]. 138 8e-33

Mmp25 matrix metalloproteinase-25 precursor [Mus musculus]. 134 1e-31

Mmp8 neutrophil collagenase precursor [Mus musculus]. 133 2e-31

Locus	Definition	Score	E value
Mmp2	72 kDa type IV collagenase precursor [Mus musculus].	427	e-120
Mmp10	stromelysin-2 precursor [Mus musculus].	157	1e-38
Mmp3	stromelysin-1 preproprotein [Mus musculus].	154	8e-38
Mmp24	matrix metalloproteinase-24 [Mus musculus].	150	2e-36
Mmp16	matrix metalloproteinase-16 precursor [Mus musculus].	148	7e-36
Mmp17	matrix metalloproteinase-17 precursor [Mus musculus].	146	2e-35
Mmp14	matrix metalloproteinase-14 [Mus musculus].	140	2e-33
Mmp15	matrix metalloproteinase-15 precursor [Mus musculus].	138	8e-33
Mmp25	matrix metalloproteinase-25 precursor [Mus musculus].	134	1e-31
Mmp8	neutrophil collagenase precursor [Mus musculus].	133	2e-31

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
MMP-2 PREDICTED: similar to matrix metalloproteinase 2 preproprotein [Canis familiaris]. 428 e-120

MMP3 stromelysin-1 precursor [Canis lupus familiaris]. 164 1e-40

LOC485849 PREDICTED: similar to Matrix metalloproteinase-24 precursor (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) [Canis familiaris]. 150 2e-36

LOC609890 PREDICTED: similar to matrix metalloproteinase 17 preproprotein [Canis familiaris]. 150 2e-36

LOC487036 PREDICTED: similar to matrix metalloproteinase 16 isoform 1 [Canis familiaris]. 148 7e-36

LOC489428 PREDICTED: similar to Interstitial collagenase precursor (Matrix metalloproteinase-1) (MMP-1) (Fibroblast collagenase) [Canis familiaris]. 147 1e-35

LOC487257 PREDICTED: similar to matrix metalloproteinase 14 (membrane-inserted) [Canis familiaris]. 144 1e-34

MMP14 PREDICTED: similar to matrix metalloproteinase 14 preproprotein isoform 2 [Canis familiaris]. 141 1e-33

LOC489429 PREDICTED: similar to Neutrophil collagenase precursor (Matrix metalloproteinase-8) (MMP-8) (PMNL collagenase) (PMNL-CL) [Canis familiaris]. 141 1e-33

MMP13 PREDICTED: similar to Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13) [Canis familiaris]. 139 4e-33

Locus	Definition	Score	E value
MMP-2	PREDICTED: similar to matrix metalloproteinase 2 preproprotein [Canis familiaris].	428	e-120
MMP3	stromelysin-1 precursor [Canis lupus familiaris].	164	1e-40
LOC485849	PREDICTED: similar to Matrix metalloproteinase-24 precursor (MMP-24) (Membrane-type matrix metalloproteinase 5) (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase) (MT5-MMP) [Canis familiaris].	150	2e-36
LOC609890	PREDICTED: similar to matrix metalloproteinase 17 preproprotein [Canis familiaris].	150	2e-36
LOC487036	PREDICTED: similar to matrix metalloproteinase 16 isoform 1 [Canis familiaris].	148	7e-36
LOC489428	PREDICTED: similar to Interstitial collagenase precursor (Matrix metalloproteinase-1) (MMP-1) (Fibroblast collagenase) [Canis familiaris].	147	1e-35
LOC487257	PREDICTED: similar to matrix metalloproteinase 14 (membrane-inserted) [Canis familiaris].	144	1e-34
MMP14	PREDICTED: similar to matrix metalloproteinase 14 preproprotein isoform 2 [Canis familiaris].	141	1e-33
LOC489429	PREDICTED: similar to Neutrophil collagenase precursor (Matrix metalloproteinase-8) (MMP-8) (PMNL collagenase) (PMNL-CL) [Canis familiaris].	141	1e-33
MMP13	PREDICTED: similar to Collagenase 3 precursor (Matrix metalloproteinase-13) (MMP-13) [Canis familiaris].	139	4e-33

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
MMP2 72 kDa type IV collagenase precursor [Bos taurus]. 426 e-119

MMP1 interstitial collagenase precursor [Bos taurus]. 160 2e-39

MMP3 stromelysin-1 [Bos taurus]. 156 3e-38

MMP24 PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]. 150 1e-36

MMP24 PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]. 150 1e-36

MMP16 matrix metalloproteinase-16 [Bos taurus]. 148 6e-36

MMP16 PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Bos taurus]. 148 6e-36

MMP17 PREDICTED: MMP17 protein-like [Bos taurus]. 147 1e-35

MMP17 PREDICTED: matrix metalloproteinase 17 [Bos taurus]. 147 1e-35

MMP15 matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]. 144 2e-34

Locus	Definition	Score	E value
MMP2	72 kDa type IV collagenase precursor [Bos taurus].	426	e-119
MMP1	interstitial collagenase precursor [Bos taurus].	160	2e-39
MMP3	stromelysin-1 [Bos taurus].	156	3e-38
MMP24	PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos taurus].	150	1e-36
MMP24	PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos taurus].	150	1e-36
MMP16	matrix metalloproteinase-16 [Bos taurus].	148	6e-36
MMP16	PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Bos taurus].	148	6e-36
MMP17	PREDICTED: MMP17 protein-like [Bos taurus].	147	1e-35
MMP17	PREDICTED: matrix metalloproteinase 17 [Bos taurus].	147	1e-35
MMP15	matrix metallopeptidase 15 (membrane-inserted) [Bos taurus].	144	2e-34

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
MMP2 72 kDa type IV collagenase [Sus scrofa]. 420 e-118

MMP3 stromelysin-1 [Sus scrofa]. 150 1e-36

MMP24 PREDICTED: matrix metalloproteinase-24 [Sus scrofa]. 148 5e-36

MMP16 PREDICTED: matrix metalloproteinase-16 [Sus scrofa]. 148 4e-36

LOC100623131 PREDICTED: neutrophil collagenase-like [Sus scrofa]. 144 6e-35

MMP8 PREDICTED: neutrophil collagenase [Sus scrofa]. 144 6e-35

MMP15 PREDICTED: matrix metalloproteinase-15 [Sus scrofa]. 143 1e-34

MMP17 PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus scrofa]. 140 1e-33

MMP1 interstitial collagenase [Sus scrofa]. 140 1e-33

MMP14 matrix metalloproteinase-14 precursor [Sus scrofa]. 139 3e-33

Locus	Definition	Score	E value
MMP2	72 kDa type IV collagenase [Sus scrofa].	420	e-118
MMP3	stromelysin-1 [Sus scrofa].	150	1e-36
MMP24	PREDICTED: matrix metalloproteinase-24 [Sus scrofa].	148	5e-36
MMP16	PREDICTED: matrix metalloproteinase-16 [Sus scrofa].	148	4e-36
LOC100623131	PREDICTED: neutrophil collagenase-like [Sus scrofa].	144	6e-35
MMP8	PREDICTED: neutrophil collagenase [Sus scrofa].	144	6e-35
MMP15	PREDICTED: matrix metalloproteinase-15 [Sus scrofa].	143	1e-34
MMP17	PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus scrofa].	140	1e-33
MMP1	interstitial collagenase [Sus scrofa].	140	1e-33
MMP14	matrix metalloproteinase-14 precursor [Sus scrofa].	139	3e-33

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

LNG01 0064 B03 LNG01_0064_B03.b BP434174 AK232008
OVR01 0020 D09 OVR01_0020_D09.b BP142899
OVRM1 0113 A03 OVRM1_0113_A03.b BP145123
PCT01 0001 B03 PCT01_0001_B03.b FS694632 AK396210
PTG01 0097 B11 PTG01_0097_B11.b FS712288
TCH01 0024 G12 TCH01_0024_G12.b CJ024237

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
399 C 2 1 0.500 W S GAC/D
T 3 0 0.500 GAT/D
495 C 3 1 0.667 W S GAC/D
T 2 0 0.333 GAT/D
707 A 3 0 0.500 W -
G 2 1 0.500

Alignment: TOP

20110601C-009370 : ....................................GGGCACCGGCCCACCCCCACGCTG
                   ---------+---------+---------+---------+---------+---------+ 24
PCT01_0001_B03.b : ncccatatttnnnnncctacgggtgcactggtgaccGGGCACCGGCCCACCCCCACGCTG
TCH01_0024_G12.b :                       gctaggactatgacxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0064_B03.b :                    taggnggattgtacatgacagtttgtacxxxxxxxxxxxxx
OVR01_0020_D09.b :                                      xxxxxxxxxxxxxxxxxxxxxxx
PTG01_0097_B11.b :                                                             
OVRM1_0113_A03.b :                                                             


20110601C-009370 : GGTCCTGTCACTCCCGAGATCTGCAAACAGGACATTGTCTTCGATGGCATCTCTCAGATC
                   ---------+---------+---------+---------+---------+---------+ 84
PCT01_0001_B03.b : GGTCCTGTCACTCCCGAGATCTGCAAACAGGACATTGTCTTCGATGGCATCTCTCAGATC
TCH01_0024_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgCTTCGATGGCATCTCTCAGATC
LNG01_0064_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCGATGGCATCTCTCAGATC
OVR01_0020_D09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgggg
PTG01_0097_B11.b :                                                             
OVRM1_0113_A03.b :                                                             


20110601C-009370 : CGCGGCGAGATCTTCTTCTTCAAGGACCGGTTCATCTGGCGGACAGTGACACCACGTGAC
                   ---------+---------+---------+---------+---------+---------+ 144
PCT01_0001_B03.b : CGCGGCGAGATCTTCTTCTTCAAGGACCGGTTCATCTGGCGGACAGTGACACCACGTGAC
TCH01_0024_G12.b : CGCGGCGAGATCTTCTTCTTCAAGGACCGGTTCATCTGGCGGACAGTGACACCACGTGAC
LNG01_0064_B03.b : CGCGGCGAGATCTTCTTCTTCAAGGACCGGTTCATCTGGCGGACAGTGACACCACGTGAC
OVR01_0020_D09.b : CGCGGCGAGATCTTCTTCTTCAAGGACCGGTTCATCTGGCGGACAGTGACACCACGTGAC
PTG01_0097_B11.b :                                                             
OVRM1_0113_A03.b :                                                             


20110601C-009370 : AAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGAT
                   ---------+---------+---------+---------+---------+---------+ 204
PCT01_0001_B03.b : AAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGAT
TCH01_0024_G12.b : AAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGAT
LNG01_0064_B03.b : AAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGAT
OVR01_0020_D09.b : AAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCCGGAAAAGATCGAT
PTG01_0097_B11.b :       nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxx
OVRM1_0113_A03.b :                                                             


20110601C-009370 : GCTGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
                   ---------+---------+---------+---------+---------+---------+ 264
PCT01_0001_B03.b : GCTGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
TCH01_0024_G12.b : GCTGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
LNG01_0064_B03.b : GCTGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
OVR01_0020_D09.b : GCTGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
PTG01_0097_B11.b : xxxGTGTACGAGGCCCCACAGGAGGAGAAGGCTGTGTTCTTTGCAGGGAATGAGTACTGG
OVRM1_0113_A03.b :   cagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-009370 : G*TCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
                   ---------+---------+---------+---------+---------+---------+ 323
PCT01_0001_B03.b : G*TCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
TCH01_0024_G12.b : G*TCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
LNG01_0064_B03.b : G*TCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
OVR01_0020_D09.b : G*TCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
PTG01_0097_B11.b : GNTCTATTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT
OVRM1_0113_A03.b : xxxxxtcTCAGCCAGCACCCTGGAGAGAGGGTACCCCAAGCCGCTGACCAGCCTGGGGCT


20110601C-009370 : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
                   ---------+---------+---------+---------+---------+---------+ 383
PCT01_0001_B03.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
TCH01_0024_G12.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
LNG01_0064_B03.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
OVR01_0020_D09.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
PTG01_0097_B11.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA
OVRM1_0113_A03.b : TCCGCCTGATGTCCAGAAAGTGGATGCTGCCTTTAACTGGAGCAAGAACAAGAAGACATA


20110601C-009370 : CATCTTCGCTGGAGACAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG
                   ---------+---------+---------+---------+---------+---------+ 443
PCT01_0001_B03.b : CATCTTCGCTGGAGACAAGTTCTGGAGGTACAATGAAGTGAAGAAGGAGATGGATCCTGG
TCH01_0024_G12.b : CATCTTCGCTGGAGATAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG
LNG01_0064_B03.b : CATCTTCGCTGGAGATAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG
OVR01_0020_D09.b : CATCTTCGCTGGAGACAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG
PTG01_0097_B11.b : CATCTTCGCTGGAGATAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG
OVRM1_0113_A03.b : CATCTTCGCTGGAGACAAGTTCTGGAGGTACAATGAAGTGAAGAAGAAGATGGATCCTGG


20110601C-009370 : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGACGCCGTGGT
                   ---------+---------+---------+---------+---------+---------+ 503
PCT01_0001_B03.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGATGCCGTGGT
TCH01_0024_G12.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGACGCCGTGGT
LNG01_0064_B03.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGACGCCGTGGT
OVR01_0020_D09.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGACGCCGTGGT
PTG01_0097_B11.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGATGCCGTGGT
OVRM1_0113_A03.b : CTTCCCCAAGCTCATTGCAGACGCCTGGAATGCCATCCCGGATAACCTGGACGCCGTGGT


20110601C-009370 : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
                   ---------+---------+---------+---------+---------+---------+ 563
PCT01_0001_B03.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
TCH01_0024_G12.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
LNG01_0064_B03.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
OVR01_0020_D09.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
PTG01_0097_B11.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA
OVRM1_0113_A03.b : GGACCTGCAGGGCGGGGGTCACAGCTACTTCTTCAAGGGCGCGTATTACCTGAAGTTGGA


20110601C-009370 : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
                   ---------+---------+---------+---------+---------+---------+ 623
PCT01_0001_B03.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
TCH01_0024_G12.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
LNG01_0064_B03.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
OVR01_0020_D09.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
PTG01_0097_B11.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG
OVRM1_0113_A03.b : GAACCAAAGTCTGAAGAGCGTGAAGTTCGGAAGCATCAAATCCGACTGGCTGGGCTGCTG


20110601C-009370 : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG
                   ---------+---------+---------+---------+---------+---------+ 683
PCT01_0001_B03.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGN
TCH01_0024_G12.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG
LNG01_0064_B03.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG
OVR01_0020_D09.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG
PTG01_0097_B11.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG
OVRM1_0113_A03.b : AGCTGGCTCCACCTCCCCCAGGGCCTGCCTCTCCATCGCCTTCTGCACACCGGGCCCTGG


20110601C-009370 : GTGCCAGGGGAGGACCCGGCTGGACCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
                   ---------+---------+---------+---------+---------+---------+ 743
PCT01_0001_B03.b : GTGCCAGGGGAGGACCCGGCTGGGCCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
TCH01_0024_G12.b : GTGCCAGGGGAGGACCCGGCTGGACCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
LNG01_0064_B03.b : GTGCCAGGGGAGGACCCGGCTGGACCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
OVR01_0020_D09.b : GTGCCAGGGGAGGACCCGGCTGGGCCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
PTG01_0097_B11.b : GTGCCAGGGGAGGACCCGGCTGGACCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC
OVRM1_0113_A03.b : GTGCCAGGGGAGGACCCGGCTGGGCCTGGCAGCCCTCAGCTCTGTAGTTAATCAGCCTTC


20110601C-009370 : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAG
                   ---------+---------+---------+---------+---------+---------+ 803
PCT01_0001_B03.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAG
TCH01_0024_G12.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAA
LNG01_0064_B03.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAG
OVR01_0020_D09.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAG
PTG01_0097_B11.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGGGTGGCTCTGCCCTGTGCTCACGGAAAG
OVRM1_0113_A03.b : TCACCCCCACCTGGTAATTTAAGAAACCGCAGAGTGGCTCTGCCCTGTGCTCACGGAAAG


20110601C-009370 : GTGCTGATCGTACCCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTCCAGA
                   ---------+---------+---------+---------+---------+---------+ 863
PCT01_0001_B03.b : GTGCTGATCGTACCCCGCCCAGGTGCCCTTCCCCCCTCTGTACCTCAC*AGCCCTCCAGA
TCH01_0024_G12.b : GTGCTGATCGTACCCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTCCAGA
LNG01_0064_B03.b : GTGCTGATCGTANCCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTC*AGA
OVR01_0020_D09.b : GTGCTGATCGTACCCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTCCAGA
PTG01_0097_B11.b : GTGCTGATCGTACCCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTCCAGA
OVRM1_0113_A03.b : GTGCTGATCGTACNCCGCCCAGGTGCCCCTCCCCCCTCTGTACCTCACCAGCCCTCCAGA


20110601C-009370 : GCACCCCCAAAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCCTGGTG
                   ---------+---------+---------+---------+---------+---------+ 923
PCT01_0001_B03.b : GCACCCCC*AAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCCTGGTG
TCH01_0024_G12.b : GCACCCCCCAAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTTGCCTGGTG
LNG01_0064_B03.b : GCACCCCCCAAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCCTGGTG
OVR01_0020_D09.b : GCTCCCCCAAAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCCTGGTG
PTG01_0097_B11.b : GCACCCCCAAAGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCCTGGTG
OVRM1_0113_A03.b : GCACCCCCAAGGTGATGCTTTGATATTCCCTATGCAGCTCTGCCTTGGGCTGCCNTGGTG


20110601C-009370 : C*TGCCACACTTTAAGCTCTTCTCCTTCCACAACCTTCTGTGGCTTACAGCACCCTTGGA
                   ---------+---------+---------+---------+---------+---------+ 982
PCT01_0001_B03.b : C*TGCCACACTTTAAGCTCTTCTTCTTCCacaacttctgttggttaaacacccttggacc
TCH01_0024_G12.b : CCTGCCACACTTTAAGCTCTTCTCCTTtccaaacccttctgttggcttacaacacccttt
LNG01_0064_B03.b : C*TGCCACACTTTAGGCTCTTCTCCTTCCacaaccttctgtggcttacagcacccttgaa
OVR01_0020_D09.b : C*TGCCACACTTTANGCTCTTCTCCTTCCACAAACTTCTGTGGCTTACAGCACCCTTGGA
PTG01_0097_B11.b : C*TGCCACACTTTAGGCTCTTCTCCTTCCacaaccttctggtgcttaacacaccctttgg
OVRM1_0113_A03.b : C*TGCCACACTTTAGGCTCTTCTCCTTCC*CAACCTTCTGTG*CTTACAGCACCCTTGGG


20110601C-009370 : GCCAAAAGAGACTGTCTCGGGAGGGC..................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : aaaaaaaactgcccgggaggcactggtggcccaaagccttacatgcctaaggtagccgaa
TCH01_0024_G12.b : ggacccaaaaaaaactggtcccgggagggccactgggtggccccaaaagccttaacatgg
LNG01_0064_B03.b : gcaaaaaaaatgtctcgggagggcactgttggcccgacagcctgacatggcctagggtaa
OVR01_0020_D09.b : GCCAAAAGAGACTGTCTCGGGAGGGCactgggtggcccgacagcctgacatggcctaagg
PTG01_0097_B11.b : agcccaaagaaactgttctcgggaaggcactggtggccccaacagcctgacatggcctag
OVRM1_0113_A03.b : GCGCAAAGAGACTGTCTCGGGgagggcactgtggcccgacaccttgaatggn       


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : aaggccacgctggtggccccccaaaacctggcttctcatgggggcccctaaaacctcctg
TCH01_0024_G12.b : cccaaaggtaaggccggaaaaggggcaccgtctgggttggccccccccaaaacaccctgg
LNG01_0064_B03.b : gcggaaagggcaccgctggttggcgccccaaacactggccttctactgctggccccctaa
OVR01_0020_D09.b : gtaggcggaaaagggcacggctggggtgcccgccccagacacctggcctttctcccttgc
PTG01_0097_B11.b : ggttagccgaaaggggcacggctgggtgggccgccccaaaccctgggcctctcattggtg
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : cttacaattgctcccaagccttggtctggctttgaactttaaatttcaccagaaatcctt
TCH01_0024_G12.b : gcctttctcactggttgggcccccttttaaaaccgctcccctgcatttatcaaattttgg
LNG01_0064_B03.b : aacgtccctgcatagcaattggctccaagcccttggtcctgcctttgatcttttaaattt
OVR01_0020_D09.b : tgggcgccctaaaaacccttccctgcatttaccagttttgcttcctaatgcacctttgtt
PTG01_0097_B11.b : gccgctttaaaccctccctgcattaacagtttgcttccaaggacntttgctctggccttt
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : cccaaaaaagatcggtttcaaaacttacaagcctccccccggggaggcccctccccctat
TCH01_0024_G12.b : cttc                                                       
LNG01_0064_B03.b : tcaccttaaaaccctttcccaacaaagaactcggttcctaagtcctgccaatgcccttaa
OVR01_0020_D09.b : ccttgtcctttttgaaccttttttaaaatttttttttaccttttgaaaattttccctttt
PTG01_0097_B11.b : gaatcttttaaaattttccacttgaaaatccctttcccacagaaggaactcgtttgttga
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : taaagccccccccccttccccggagggaaacaactggtgcggcccctcctctttaggtcc
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b : cccactgggatgccccctgtccacctaataaaggcccaccgggcctttccccggagggag
OVR01_0020_D09.b : tcccccaaaaaaaaaaaaggggaacttcagggggttttgggtctttgaaaaaaatctccc
PTG01_0097_B11.b : aaacccggcaaatgcccccaacccccgtggggaggccccccttccccccttttaagaggg
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : ggaaaacccttaaaaacacttaaaaaaaaaaagccgttccgcgggggcgcaaaaaaaaac
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b : aaacaacatggtccgtccaaccccccctttggtcccggggaacaccctgtaaaaaccctt
OVR01_0020_D09.b : cccctgtcgaccccaa                                           
PTG01_0097_B11.b : cccaaccgggccttttcccggggggggggaaaaaaacctgggtcccggcccacccccccc
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : cccccccaaaaaaaagtgttttttttttataaaacaaaaaaatttnnggnnnnnnnngcc
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b : taaaaaaaaaaagctgtgggggttgtggccttatatttgggcatttcactttttaatt 
OVR01_0020_D09.b :                                                             
PTG01_0097_B11.b : cctttgggttccccgggaaaaacccccgtgtaaataaacccccttgggggccaaaaaaaa
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : attcctctcccccctnnnnnnnnnaaagaagagcccacccttcttnnnnnnnnnnnnnnn
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b :                                                             
OVR01_0020_D09.b :                                                             
PTG01_0097_B11.b : aaaaaaaaaggcccttttctcccgcggggcggccccctaaaattctcgggggccaattat
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b : nnnnnnnnnnnnn                                              
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b :                                                             
OVR01_0020_D09.b :                                                             
PTG01_0097_B11.b : accaccctttttgtaaggggccccctgggggttataaaaggcgggggcttttttaaccga
OVRM1_0113_A03.b :                                                             


20110601C-009370 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1008
PCT01_0001_B03.b :                                                             
TCH01_0024_G12.b :                                                             
LNG01_0064_B03.b :                                                             
OVR01_0020_D09.b :                                                             
PTG01_0097_B11.b : gggaaaacaattcgttttttaaaaaaaccttgtggggaaaagaaacaccaaaa      
OVRM1_0113_A03.b :