[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-009395
Length:
610
Sequence:
[FASTA format sequence]
GGGTTTCTGG GCCGTTACCC TCGCTCGTCT GGTCGTGGGC GCAGCTTCCG GCTGCGTTGG
GAGGTCGTGC GGCTGGAGGA CTCGAACCCA GAGGGAGCGG CAGCATTCAG GGGACATCAT
GCCAACTGCC AAGCAACTGG CTGACATTGG CTACAAGACC TTCTCCACCT CCATGATGCT
CCTCACCGTG TATGGGGGCT ACCTCTGCAG CGTCCGGGCC TACCATTACT TCCAGCGGCG
CAGCTCCCGG CGCCAGGCTG CGGAAGAGCA GAAGACCTCG GGAGTCCCCT AGGAGCAGGG
ACGTTTTTCT TGAGCAGAGA GGCCTGAGGC ATGCTATGGA AAGACCTCAC CTGCAGTCAT
TTCTGAGTCA AGAGGACTAG AGCCTTAATG GTTTCTGAAC TCTGCTGGGA GAAAGTGCCC
ATGTTTTTCT CTGGTGCCGT CAGTTTGGAG AGGCTGGCTG TCAAGTCACA GCAGGAATGG
GAGGGTGAGG CACACCTACA GACATTAAAT GTTTTGCCCC GTCAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAACA AAAAAAAAAG AAAAACACAA AAACGGAAAA AAATATAAAA
AAAAAAAAAG
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | C12orf62 | hypothetical protein LOC84987 [Homo sapiens]. | 103 | 9e-23 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| 2310016M24Rik | hypothetical protein LOC66379 [Mus musculus]. | 102 | 2e-22 | O |
| Locus | Definition | Score | E value | FL |
|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| C5H12orf62 | hypothetical protein LOC768048 [Bos taurus]. | 113 | 1e-25 | O |
| Locus | Definition | Score | E value | FL |
|---|
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20110601C-009395 : ..........................................................GG
---------+---------+---------+---------+---------+---------+ 2
SPLT1_0023_A11.b : nnnccgacggtagaggccgtagtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGG
ILNT1_0014_G02.b : tttccgaggtacgaggxxxxxxxxxxxx
SPLT1_0054_A08.b : nnnnggctagtagaggccgtaxxxxxxxxxxx
CBLT1_0015_A03.b : nnttcgaggtacacg
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : GTTTCTGGGCCGTTACCCTCGCTCGTCTGGTCGTGGGCGCAGCTTCCGGCTGCGTTGGGA
---------+---------+---------+---------+---------+---------+ 62
SPLT1_0023_A11.b : GTTTCTGGGCCGTTACCCTCGCTCGTCTGGTCGTGGGCGCAGCTTCCGGCTGCGTTGGGA
ILNT1_0014_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGTGGGCGCAGCTTCCGGCTGCGTTGGGA
SPLT1_0054_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxgtggtcGTGGGCGCAGCTTCCGGCTGCGTTGGGA
CBLT1_0015_A03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgTTCCGGCTGCCCTTTTA
CBLT1_0025_B01.b : tttttccgaggtacgacgccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0073_B01.b : ttttgcgacggtagaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-009395 : GGTCGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
---------+---------+---------+---------+---------+---------+ 122
SPLT1_0023_A11.b : GGTCGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
ILNT1_0014_G02.b : GGTCGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
SPLT1_0054_A08.b : GGTCGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
CBLT1_0015_A03.b : GGTCGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
CBLT1_0025_B01.b : xxxgGTGCGGCTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
CBLT1_0073_B01.b : xxxxxxxxxxxTGGAGGACTCGAACCCAGAGGGAGCGGCAGCATTCAGGGGACATCATGC
20110601C-009395 : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
---------+---------+---------+---------+---------+---------+ 182
SPLT1_0023_A11.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
ILNT1_0014_G02.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
SPLT1_0054_A08.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
CBLT1_0015_A03.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
CBLT1_0025_B01.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
CBLT1_0073_B01.b : CAACTGCCAAGCAACTGGCTGACATTGGCTACAAGACCTTCTCCACCTCCATGATGCTCC
20110601C-009395 : TCACCGTGTATGGGGGCTACCTCTGCAGCGTCCGGGCCTACCATTACTTCCAGCGGCGCA
---------+---------+---------+---------+---------+---------+ 242
SPLT1_0023_A11.b : TCACCGTGTATGGGGGCTACCTCTGCAGCATCCGGGCCTACCATTACTTCCAGCGGCGCA
ILNT1_0014_G02.b : TCACCGTGTATGGGGGCTACCTCTGCAGCGTCCGGGCCTACCATTACTTCCAGCGGCGCA
SPLT1_0054_A08.b : TCACCGTGTATGGGGGCTACCTCTGCAGCGTCCGGGCCTACCATTACTTCCAGCGGCGCA
CBLT1_0015_A03.b : TCACCGTGTATGGGGGCTACCTCTGCAGCGTCCGGGCCTACCATTACTTCCAGCGGCGCA
CBLT1_0025_B01.b : TCACCGTGTATGGGGGCTACCTCTGCAGCATCCGGGCCTACCATTACTTCCAGCGGCGCA
CBLT1_0073_B01.b : TCACCGTGTATGGGGGCTACCTCTGCAGCGTCCGGGCCTACCATTACTTCCAGCGGCGCA
20110601C-009395 : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
---------+---------+---------+---------+---------+---------+ 302
SPLT1_0023_A11.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
ILNT1_0014_G02.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
SPLT1_0054_A08.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
CBLT1_0015_A03.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
CBLT1_0025_B01.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
CBLT1_0073_B01.b : GCTCCCGGCGCCAGGCTGCGGAAGAGCAGAAGACCTCGGGAGTCCCCTAGGAGCAGGGAC
20110601C-009395 : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
---------+---------+---------+---------+---------+---------+ 362
SPLT1_0023_A11.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
ILNT1_0014_G02.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
SPLT1_0054_A08.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
CBLT1_0015_A03.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
CBLT1_0025_B01.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
CBLT1_0073_B01.b : GTTTTTCTTGAGCAGAGAGGCCTGAGGCATGCTATGGAAAGACCTCACCTGCAGTCATTT
20110601C-009395 : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
---------+---------+---------+---------+---------+---------+ 422
SPLT1_0023_A11.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
ILNT1_0014_G02.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
SPLT1_0054_A08.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
CBLT1_0015_A03.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
CBLT1_0025_B01.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
CBLT1_0073_B01.b : CTGAGTCAAGAGGACTAGAGCCTTAATGGTTTCTGAACTCTGCTGGGAGAAAGTGCCCAT
20110601C-009395 : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
---------+---------+---------+---------+---------+---------+ 482
SPLT1_0023_A11.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
ILNT1_0014_G02.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
SPLT1_0054_A08.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
CBLT1_0015_A03.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
CBLT1_0025_B01.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
CBLT1_0073_B01.b : GTTTTTCTCTGGTGCCGTCAGTTTGGAGAGGCTGGCTGTCAAGTCACAGCAGGAATGGGA
20110601C-009395 : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCAAAAAAAAAAAAAAAAAAA
---------+---------+---------+---------+---------+---------+ 542
SPLT1_0023_A11.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCAAAAAAAAAAAAAn
ILNT1_0014_G02.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCAAAAAAAAAAAAAA
SPLT1_0054_A08.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCaaaaaaaaaaaaaaaaaaa
CBLT1_0015_A03.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCaaaaaaaaaaaaaaaaaaa
CBLT1_0025_B01.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCAAAAAAAAAAAAAAn
CBLT1_0073_B01.b : GGGTGAGGCACACCTACAGACATTAAATGTTTTGCCCCGTCAAAAAAAAAAAAAAa
20110601C-009395 : AAAAAAAAAAAAAAAACAAAAAAAAAAGAAAAACACAAAAACGGAAAAAAATATAAAAAA
---------+---------+---------+---------+---------+---------+ 602
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b : aa
CBLT1_0015_A03.b : aaaaaaaaaaaaaaaacaaaaaaaaaagaaaaacacaaaaacggaaaaaaatataaaaaa
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : AAAAAAAG....................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : aaaaaaaGttcccccggccccgaatatccctttagggagggttaatgggaccccaacgga
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : taaaaatactttgtgtgacttgggcacaacccgaaattagaaggggggtaaaaaaatcgt
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : ttttttgggaaaatttgggaaggtaatggtttttttaaaccctttaaaagctccaataag
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : aaggtttacaacaaaattgccttctttttatttttccaggtcaggggaagggtgggaaag
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : gtttttccccccttataaatcccgacaattcccgaggaaagggtattccctatgtaagac
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : ccctccccccgtcccaaatagcaaggccgttgacggaaggataatagggctaggggcaag
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : tatattacggcccacgcccccggtggttgaaattttacccccccaccccgcgggaactcg
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : tagcaaacgaccttttgaaagagcgaccacaaattaccccaaagactgtagcaaaggccc
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : ccccgcgtggaattcctagacgagcccgcccccattttatgattccgaggaataccgtct
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : gcgtttacgatttgatgaccgggtaagtgataggaagaagaggccgttctcttatatgaa
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : acgcacgtccagtattagtatataacacacgtatattgaatctatatggccgttccgccc
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : gtgagacgcacattatcgacgccagcactgacggggccactgattaatgattgccatcca
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : cgggaccgcggtgagtaatacgcgaatccccaccgagcgtcataacgaattagtcgcata
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : cgcgtaagcatagaagcgtacgcccgacgccgtatcatctctacgataatgcgggngcac
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
20110601C-009395 : ............................................................
---------+---------+---------+---------+---------+---------+ 610
SPLT1_0023_A11.b :
ILNT1_0014_G02.b :
SPLT1_0054_A08.b :
CBLT1_0015_A03.b : tgctctacgtatt
CBLT1_0025_B01.b :
CBLT1_0073_B01.b :
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