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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-009460

Length: 941

Sequence [FASTA format sequence]
AGTTTATGAG AAATTGGCAA GAACATTGAC TGCCTTGAGG TCTCCAGCAC CAATCTCCAC
TGCTAAGAGC ATGATCTGGC TGTTCCAGTC TCTCACCCTT GTCTTCTGCC TTGACCCAGG
AAATACAGTT TCACAAACCA GCTCAACCCC ACTGATTGTG AACGGGACCC TGGGGGAGTC
AGTAACTCTA CCCCTGAAGT TCCCTGAAGA AGAGAAGATC ATGTCCATCA CCTGGCTTCA
CGATGGAAAA TCTATCATCT TCATACGGCC AAATAAGGCA CAAAGTCCAC TAATACACGT
AACTGATCCA AAACAGAGCA ATCGATTGAA CGTCACCAAG TCCTACTCTC TGCAACTCAG
CAACCTGACG ATGGCAGACA CAGGATCTTA CACCGCCCAG ATAACCACAA CCTCCGTAGT
GTTTTACAGT TATTATCTGA GGATCTTCAG ACGGCTGGGG AACCTTCAGG TTGTCACTCT
CACTGAAAGG TCTAGGAATG AGACCTGTGT GATCCACCTG ACCTGCTCCG TGGAGGATCC
AAATGATAAC GTCTCATTCA GCTGGCAGGT CTCAGGAAGC ATGCTTCCAA GTGAAGCAAA
CCTCACTGTC TCCTGGGACC CCAAGAATTT CAGAGACGAG ACCTACATGT GCATAGCTGA
GAATCCTGTC AGCAATGCCT CCTCCTCTGT CTCTGTCCAG AGCCTCTGCA AAGGTGTTAT
TAATGCAAAA AATGTACACC TGGACACCAG ATGGATTATA ATGGTGGTTC CTTTGATATG
TATAGTCATC TTTGCCTGCC TGTGTGTTCG GAAGAAAAAT TAGCAGATGT CTTTCATTTC
CTGCTCAGCA AACCCAAGGA GCTGGTGCAG AGACCGTGAG GAACTTAAAT ATGCTTCCTT
TCTCTCTGGA ACACTGTCTA TGCTCAGGTC ACCATGCAAA T


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLAMF6SLAM family member 6 isoform 1 precursor [Homo sapiens]. 2562e-68O
Contig/Assembly ProteinSLAMF6SLAM family member 6 isoform 2 precursor [Homo sapiens]. 2562e-68O
Contig/Assembly ProteinSLAMF6SLAM family member 6 isoform 3 precursor [Homo sapiens]. 1725e-43O
Contig/Assembly ProteinCD84SLAM family member 5 isoform 1 [Homo sapiens]. 1033e-22O
Contig/Assembly ProteinCD84SLAM family member 5 isoform 3 [Homo sapiens]. 1033e-22O
Contig/Assembly ProteinCD84SLAM family member 5 isoform 2 [Homo sapiens]. 1033e-22O
Contig/Assembly ProteinSLAMF6SLAM family member 6 isoform 4 precursor [Homo sapiens]. 996e-21O
Contig/Assembly ProteinLY9T-lymphocyte surface antigen Ly-9 isoform a [Homo sapiens]. 95.18e-20
Contig/Assembly ProteinSLAMF9SLAM family member 9 isoform 1 [Homo sapiens]. 80.13e-15O
Contig/Assembly ProteinSLAMF7SLAM family member 7 [Homo sapiens]. 76.34e-14O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSlamf6SLAM family member 6 [Mus musculus]. 2031e-52O
Contig/Assembly ProteinSlamf9SLAM family member 9 precursor [Mus musculus]. 1017e-22O
Contig/Assembly ProteinCd84SLAM family member 5 precursor [Mus musculus]. 95.94e-20O
Contig/Assembly ProteinSlamf7SLAM family member 7 precursor [Mus musculus]. 795e-15O
Contig/Assembly ProteinLy9T-lymphocyte surface antigen Ly-9 precursor [Mus musculus]. 76.33e-14


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC488641PREDICTED: similar to CD84 antigen (leukocyte antigen) [Canis familiaris]. 1111e-24
Contig/Assembly ProteinLOC488643PREDICTED: similar to lymphocyte antigen 9 [Canis familiaris]. 85.19e-17
Contig/Assembly ProteinLOC609992PREDICTED: similar to SLAM family member 7 [Canis familiaris]. 76.63e-14O
Contig/Assembly ProteinLOC488634PREDICTED: similar to immunoglobulin superfamily, member 9 [Canis familiaris]. 59.74e-09O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLAMF6SLAM family member 6 [Bos taurus]. 3031e-82O
Contig/Assembly ProteinCD84PREDICTED: CD84 molecule-like [Bos taurus]. 1118e-25O
Contig/Assembly ProteinCD84PREDICTED: CD84 molecule-like [Bos taurus]. 1118e-25O
Contig/Assembly ProteinSLAMF7SLAM family member 7 [Bos taurus]. 84.31e-16O
Contig/Assembly ProteinSLAMF7PREDICTED: SLAM family member 7-like [Bos taurus]. 84.31e-16O
Contig/Assembly ProteinLY9T-lymphocyte surface antigen Ly-9 [Bos taurus]. 80.92e-15
Contig/Assembly ProteinSLAMF9PREDICTED: SLAM family member 9 [Bos taurus]. 78.67e-15O
Contig/Assembly ProteinSLAMF9PREDICTED: SLAM family member 9 [Bos taurus]. 78.67e-15O
Contig/Assembly ProteinALCAMCD166 antigen precursor [Bos taurus]. 51.21e-06O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLAMF6PREDICTED: SLAM family member 6 [Sus scrofa]. 480e-136O
Contig/Assembly ProteinLOC100152851PREDICTED: SLAM family member 5 [Sus scrofa]. 1015e-22O
Contig/Assembly ProteinSLAMF9PREDICTED: t-lymphocyte surface antigen Ly-9 isoform 2 [Sus scrofa]. 89.43e-18
Contig/Assembly ProteinLOC100154053PREDICTED: SLAM family member 7-like [Sus scrofa]. 87.41e-17O
Contig/Assembly ProteinLY9PREDICTED: t-lymphocyte surface antigen Ly-9 isoform 1 [Sus scrofa]. 84.77e-17O
Contig/Assembly ProteinLY9PREDICTED: t-lymphocyte surface antigen Ly-9 isoform 2 [Sus scrofa]. 84.77e-17O
Contig/Assembly ProteinLOC100625909PREDICTED: SLAM family member 5-like isoform 2 [Sus scrofa]. 65.93e-11O
Contig/Assembly ProteinLOC100152036PREDICTED: SLAM family member 9-like [Sus scrofa]. 51.28e-07
Contig/Assembly ProteinLOC100157685PREDICTED: signaling lymphocytic activation molecule-like [Sus scrofa]. 50.81e-06O
Contig/Assembly ProteinLOC100525572PREDICTED: SLAM family member 9-like [Sus scrofa]. 50.81e-06O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010009G10AMP01_0009_G10.bBW955648 AK230557
AMP010026B02AMP01_0026_B02.bBW956921 
AMP010052D05AMP01_0052_D05.bBW958688 
DCI010071C03DCI01_0071_C03.bDB795870 
DCI010089B04DCI01_0089_B04.bDB797438 
SMG010020B01SMG01_0020_B01.bFS714971 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
121A300.500WSGGA/G
G300.500GGG/G


Alignment:      TOP

20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0009_G10.b : nnaaacgtaatcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0020_B01.b :
AMP01_0026_B02.b : nnaaaggatactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0071_C03.b : nnnaaatgatactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0052_D05.b : nnnngcgata
DCI01_0089_B04.b : aa
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0009_G10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0020_B01.b : nnttatttataaannggata
AMP01_0026_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0071_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0052_D05.b : aanttagggatatcttgggctgctcccgcgccgxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0089_B04.b : atacccatatctaagggctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-009460 : .........................................AGTTTATGAGAAATTGGCA
---------+---------+---------+---------+---------+---------+ 19
AMP01_0009_G10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTTTATGAGAAATTGGCA
SMG01_0020_B01.b : aagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGAGAAATTGGCA
AMP01_0026_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaTGAGAAATTGGCA
DCI01_0071_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxaTGAGAAATTGGCA
AMP01_0052_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0089_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-009460 : AGAACATTGACTGCCTTGAGGTCTCCAGCACCAATCTCCACTGCTAAGAGCATGATCTGG
---------+---------+---------+---------+---------+---------+ 79
AMP01_0009_G10.b : AGAACATTGACTGCCTTGAGGTCTCCAGCACCAATCTCCACTGCTAAGAGCATGATCTGG
SMG01_0020_B01.b : AGAACATTGACTGCCTTGAGGTCTCCAGCACCAATCTCCACTGCTAAGAGCATGATCTGG
AMP01_0026_B02.b : AGAACATTGACTGCCTTGAGGTCTCCAGCACCAATCTCCACTGCTAAGAGCATGATCTGG
DCI01_0071_C03.b : AGAACATTGACTGCCTTGAGGTCTCCAGCACCAATCTCCACTGCTAAGAGCATGATCTGG
AMP01_0052_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTGCTAAGAGCATGATCTGG
DCI01_0089_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTGCTAAGAGCATGATCTGG
20110601C-009460 : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGAAATACAGTTTCACAAACC
---------+---------+---------+---------+---------+---------+ 139
AMP01_0009_G10.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGGAATACAGTTTCACAAACC
SMG01_0020_B01.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGGAATACAGTTTCACAAACC
AMP01_0026_B02.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGAAATACAGTTTCACAAACC
DCI01_0071_C03.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGAAATACAGTTTCACAAACC
AMP01_0052_D05.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGGAATACAGTTTCACAAACC
DCI01_0089_B04.b : CTGTTCCAGTCTCTCACCCTTGTCTTCTGCCTTGACCCAGGAAATACAGTTTCACAAACC
20110601C-009460 : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
---------+---------+---------+---------+---------+---------+ 199
AMP01_0009_G10.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
SMG01_0020_B01.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
AMP01_0026_B02.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
DCI01_0071_C03.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
AMP01_0052_D05.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
DCI01_0089_B04.b : AGCTCAACCCCACTGATTGTGAACGGGACCCTGGGGGAGTCAGTAACTCTACCCCTGAAG
20110601C-009460 : TTCCCTGAAGAAGAGAAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
---------+---------+---------+---------+---------+---------+ 259
AMP01_0009_G10.b : TTCCCTGAAGAAGAGAAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
SMG01_0020_B01.b : TTCCCTGAAGAAGAGAAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
AMP01_0026_B02.b : TTCCCTGAAGAAGAGAAGATCATGTCCATTACCTGGCTTCACGATGGAAAATCTATCATC
DCI01_0071_C03.b : TTCCCTGAAGAAGAGGAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
AMP01_0052_D05.b : TTCCCTGAAGAAGAGAAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
DCI01_0089_B04.b : TTCCCTGAAGAAGAGAAGATCATGTCCATCACCTGGCTTCACGATGGAAAATCTATCATC
20110601C-009460 : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
---------+---------+---------+---------+---------+---------+ 319
AMP01_0009_G10.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
SMG01_0020_B01.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
AMP01_0026_B02.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
DCI01_0071_C03.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTTATACACGTAACTGATCCAAAACAGAGC
AMP01_0052_D05.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
DCI01_0089_B04.b : TTCATACGGCCAAATAAGGCACAAAGTCCACTAATACACGTAACTGATCCAAAACAGAGC
20110601C-009460 : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
---------+---------+---------+---------+---------+---------+ 379
AMP01_0009_G10.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
SMG01_0020_B01.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
AMP01_0026_B02.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
DCI01_0071_C03.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
AMP01_0052_D05.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
DCI01_0089_B04.b : AATCGATTGAACGTCACCAAGTCCTACTCTCTGCAACTCAGCAACCTGACGATGGCAGAC
20110601C-009460 : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
---------+---------+---------+---------+---------+---------+ 439
AMP01_0009_G10.b : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
SMG01_0020_B01.b : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
AMP01_0026_B02.b : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
DCI01_0071_C03.b : ACAGGATCTTACACCGCCCAGATAACCCCAACCTCCGTAGTGTTTTACAGTTATTATCTG
AMP01_0052_D05.b : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
DCI01_0089_B04.b : ACAGGATCTTACACCGCCCAGATAACCACAACCTCCGTAGTGTTTTACAGTTATTATCTG
20110601C-009460 : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
---------+---------+---------+---------+---------+---------+ 499
AMP01_0009_G10.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
SMG01_0020_B01.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
AMP01_0026_B02.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
DCI01_0071_C03.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
AMP01_0052_D05.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
DCI01_0089_B04.b : AGGATCTTCAGACGGCTGGGGAACCTTCAGGTTGTCACTCTCACTGAAAGGTCTAGGAAT
20110601C-009460 : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
---------+---------+---------+---------+---------+---------+ 559
AMP01_0009_G10.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
SMG01_0020_B01.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
AMP01_0026_B02.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
DCI01_0071_C03.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
AMP01_0052_D05.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
DCI01_0089_B04.b : GAGACCTGTGTGATCCACCTGACCTGCTCCGTGGAGGATCCAAATGATAACGTCTCATTC
20110601C-009460 : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGGGAC
---------+---------+---------+---------+---------+---------+ 619
AMP01_0009_G10.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGNGAC
SMG01_0020_B01.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGNGAC
AMP01_0026_B02.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGNGAC
DCI01_0071_C03.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGNGAC
AMP01_0052_D05.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCCCACTGTCTCCTGNGAC
DCI01_0089_B04.b : AGCTGGCAGGTCTCAGGAAGCATGCTTCCAAGTGAAGCAAACCTCACTGTCTCCTGGGAC
20110601C-009460 : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
---------+---------+---------+---------+---------+---------+ 679
AMP01_0009_G10.b : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
SMG01_0020_B01.b : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
AMP01_0026_B02.b : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
DCI01_0071_C03.b : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGCCAGCAATGCC
AMP01_0052_D05.b : CCCAAGAATTTCAGAGACAAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
DCI01_0089_B04.b : CCCAAGAATTTCAGAGACGAGACCTACATGTGCATAGCTGAGAATCCTGTCAGCAATGCC
20110601C-009460 : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
---------+---------+---------+---------+---------+---------+ 739
AMP01_0009_G10.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
SMG01_0020_B01.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
AMP01_0026_B02.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
DCI01_0071_C03.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
AMP01_0052_D05.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
DCI01_0089_B04.b : TCCTCCTCTGTCTCTGTCCAGAGCCTCTGCAAAGGTGTTATTAATGCAAAAAATGTACAC
20110601C-009460 : CTGGACACCAGATGGATTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCTGC
---------+---------+---------+---------+---------+---------+ 799
AMP01_0009_G10.b : CTGGACACCAGATGGTTTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCCTG
SMG01_0020_B01.b : CTGGACACCAGATGGTTTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCTGC
AMP01_0026_B02.b : CTGGACACCAGATGGATTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCTGG
DCI01_0071_C03.b : CTGGACACCAGATGGATTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCCTG
AMP01_0052_D05.b : CTGGACACCAGATGGTTTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCCTG
DCI01_0089_B04.b : CTGGACACCAGATGGATTATAATGGTGGTTCCTTTGATATGTATAGTCATCTTTGCCTGC
20110601C-009460 : CTGTGTGTTCGGAAGA*AAAATTAGCAGATGTCTTTCATTT*CCTGCTCAGCAAACCCAA
---------+---------+---------+---------+---------+---------+ 857
AMP01_0009_G10.b : CTGTGTNGTTCGAGGA*AAAAATAACAGATGTCTTTCATTccctgctcaacaaccccagg
SMG01_0020_B01.b : TTGTGTGTTCGGAAGAAAAAATTAGCAGATGTCTTTCATTT*CCctgctcagcaaaccca
AMP01_0026_B02.b : CTGTGTGTTCGGAAGA*AAAATTAGCAGATGTCTTTCATTccctgctcagcaaaccaaag
DCI01_0071_C03.b : CTGTGTGNTTCGGAGA*AAAATTAGCAGATGTCTTTCATTT*CCTGCTCAGC*AACCCAA
AMP01_0052_D05.b : CTGTGTNGTCGGAGGA*AAAAATAGCAGATGTCTTTCATTtccctgctcagcaaacccna
DCI01_0089_B04.b : TTGTGTNGTCGGAGGAAAAAATTAGCAGATGTCTTTCATTTCCCTGCTCAGCAAACCCAA
20110601C-009460 : GGAGCTGGTGCAGAGACCGTGAGGAACTTAAATATGCTTCCTTTCTCTCTGGAACACTGT
---------+---------+---------+---------+---------+---------+ 917
AMP01_0009_G10.b : agctggtgcaaagacgtgaggaacttaaatatgcttcctctcttccggaaccctgtctat
SMG01_0020_B01.b : agaactggtgcacaaccgtgaggaacttaaaaaatgctccctcctcttcgggaaacctgt
AMP01_0026_B02.b : agctggtgcaaagacgtgaggaacttaaaaatgcttcctctcttcgggaacctgtctatg
DCI01_0071_C03.b : GGAGCTGGTGCAGAGAC*GTGAGGAACTTAAATATGCT**CCTTCTCTCTGGAACACTGT
AMP01_0052_D05.b : ggagctggtgcanagacccgtgagaactagaatatgcttcccctctctctngggacctgt
DCI01_0089_B04.b : GGAGCTGGTGCAGAGACCGTGAGGAACTTAGATATGCTTCCTTTCTCTCTGGAACACTGT
20110601C-009460 : CTATGCTCAGGTCACCATGCAAAT....................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b : gcccaggtcccctgcaaatcaggaaaaggaaaccctacccctttgaaaataagacccccc
SMG01_0020_B01.b : ctatgctccggtccccatgccaatcagaaagaaggacccctaccccttgaaaaataagac
AMP01_0026_B02.b : ctcagtccccctgcaatcaggaagaagaaccctacccccttgaaaaatatgactcccccc
DCI01_0071_C03.b : CTATGCTCAGtcaccatgcaatcnagaaggagaaccctacaccttgaaaatatgactccc
AMP01_0052_D05.b : ctatgctcaggtcacccatgcaatcagaaagagaacccntacacttgaaaatatgactcc
DCI01_0089_B04.b : CTATGCTCAGGTCACCATGCAAATcaggaaagagaacccntacaccntttgaaaatatga
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b : caaatttaccctgaattcatccctcggaaagaaagccctctaacc
SMG01_0020_B01.b : tcccccccatttacctggaaatcacagtcggaaaaaaacctttgaaaccagccaactgcc
AMP01_0026_B02.b : attttcccgaagttctccttcggaaaaaagccctggaacccagcaactgccctccaaatt
DCI01_0071_C03.b : cacatttacctgaagtcatcatctggaaaaaagcctctgaaccagccactgcctccacat
AMP01_0052_D05.b : acacatttacctgaagtctcgtctggaagaagcctctgacccagcactgcctcacatgtc
DCI01_0089_B04.b : ctccacacatttacactgaagttcatcatctggaaagaagccttctgaaccaagncagct
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b :
SMG01_0020_B01.b : tccacattccaccaagggcaaaagcccccaaaattcggaaaaccctttccccgattccta
AMP01_0026_B02.b : cccgaagggctaaaggcccccagaattcggaccccccct
DCI01_0071_C03.b : ggccgtaggggcaaagcctccaaaattcggaccacctcttcccgatccttaaaaagacaa
AMP01_0052_D05.b : cgtaagggcaaaggctccaagattcagacaccttctccccgatcctgaaaagaagacttg
DCI01_0089_B04.b : gccctcaaatgtctcgtaggtgctaaaggcctcaaaaattcagacgacactcttctctga
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b :
SMG01_0020_B01.b : aaaaaggaaaattggttccccccgcccccaatttaaatccggaaaccccccccccctcca
AMP01_0026_B02.b :
DCI01_0071_C03.b : cttgtcctccggcccaaattaaattcggataccccccccttcaatgaccccttcgggcaa
AMP01_0052_D05.b : gcctgctcgcccatttaaatcgggaaccccccccctcaattacccctcggggaaaagggg
DCI01_0089_B04.b : ttnataaaaagacaaacttggctcgcccggacaccaattaaaataaggaattcctccatc
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b :
SMG01_0020_B01.b : attaacccccttccgggccaaatgggggaaaaacttttccccaaaaaccaaaaaattttt
AMP01_0026_B02.b :
DCI01_0071_C03.b : ttgggggaaactttctcgttgccaaaaattttaatcccaaaaaaaaacccccagtgtttc
AMP01_0052_D05.b : gaaaacctcccataccaaaaatttttttcccgaaaaaaaaagccgttttttttttttccg
DCI01_0089_B04.b : cttcgattgaactcttccgggcaaatgtggagaaacctttcccatacccaaaaatttaat
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b :
SMG01_0020_B01.b : attcctcgcaaaaagaaaaacgccccaattgtatttcttttgctctcccggggccgcggg
AMP01_0026_B02.b :
DCI01_0071_C03.b : tgtgaaccaggagacggaaa
AMP01_0052_D05.b : gggccaggaaaaaaa
DCI01_0089_B04.b : tttccgaaaaaaaaaacgccaattaatttttgttcccggggcgcgggagaaaatttaaaa
20110601C-009460 : ............................................................
---------+---------+---------+---------+---------+---------+ 941
AMP01_0009_G10.b :
SMG01_0020_B01.b : gaaaaaattttaaaaaacccttctctttaaaagag
AMP01_0026_B02.b :
DCI01_0071_C03.b :
AMP01_0052_D05.b :
DCI01_0089_B04.b : caccctttaaaaaagtcttttaaaagagttttgtctcct