[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-010012
Length:
1,118
Sequence:
[FASTA format sequence]
GTTGGGGCGT CTTTGAGAAG CGGTGGTGGG TGCTGAGGTG GTGGATGCGG GCGTGAGCGG
GTAGCGGAAG TGTGCGGACG TCCCCTCCTC CCCCGAAGCT GATCTGCGGA TCTCATCCCC
GGGCCTCGCC CCTCGCCTTC CCCAAACCCC GTCCACTCCC CTTTCATTGC TCCGGGAGCC
GTCGGGGCTG TTTCCCCTTT GGGAACGGAA AGGTACCGCA GAGGCTTAGA GAGGGGAGGA
AGGTGACATC AATTTGTGCA TCTCCCAGAC TAGCACCGAG GCACTGCTTG CCGCTCAGGC
CCCGTCGGAT TGCCTGTCCT CCGGCAGCTC AGCGCGAAGG TGTGAACTCA GCTTCCTTCA
GAGCCTCCCC GCCATGACCT CCAAGAAGCT GGTGAACTCA GTGGCAGGCT GTGCCGACGA
TGCCCTTGCT GGCCTGGTGG CCTGCAACCC CAGCCTGCAG CTCCTGCAAG GCCACCGAGT
GGCCCTCCGT TCTGACCTGG ACAGTCTCAA GGGCCGGGTG GCCCTACTGT CGGGTGGGGG
CTCTGGCCAT GAGCCTGCCC ATGCCGGGTT CATAGGGAAG GGCATGCTCA CAGGGGTCAT
CGCAGGAGCC GTGTTCACCT CCCCGGCAGT GGGCAGCATC CTGGCGGCCA TCAGGGCAGT
GGCCCAGGCG GGCACAGTGG GGACCCTCCT CATCGTGAAG AACTACACTG GGGATCGGCT
CAACTTCGGC CTGGCCCGGG AGCAGGCCCG GGCAGAGGGC ATCCCCGTGG AGATGGTGGT
CGTTGGGGAC GACAGCGCCT TCACCGTCCT GAAGAAGGCG GGCCGGCGGG GGCTCTGTGG
CACGGTGCTC ATACACAAGG TGGCAGGTGC CCTGGCTGAG GCAGGTGTGG GGCTGGAGGA
GATCACGAAT CGGGTGAGCG TGGTCGCCAA GGCCATGGGA ACCCTGGGAG TGAGCCTGTC
CTCCTGCAGC GTCCCCGGTT CCAGACCCAC CTTTGAGCTC TCAGCCGATG AGGTGGAGCT
GGGCCTGGGG ATCCACGGGG AGGCTGGCGT GCTCCGGATA AAGATGGGCA CCGCCGACGA
GATTGTGGCG CACATGCTGA ACCACATGAC AGACTCCT
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | DAK | bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) [Homo sapiens]. | 422 | e-118 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | Dak | bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) [Mus musculus]. | 387 | e-107 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | LOC483800 | PREDICTED: similar to W02H5.8 [Canis familiaris]. | 417 | e-117 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | DAK | bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) [Bos taurus]. | 431 | e-121 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | LOC100520121 | PREDICTED: bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)-like [Sus scrofa]. | 445 | e-125 | O |
|
|
20110601C-010012 : .....................................................GTTGGGG
---------+---------+---------+---------+---------+---------+ 7
PBL01_0086_C04.b : nnnggatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTGGGG
LVR01_0051_E04.b :
CLNT1_0003_F09.b :
CLNT1_0003_H04.b :
20110601C-010012 : CGTCTTTGAGAAGCGGTGGTGGGTGCTGAGGTGGTGGATGCGGGCGTGAGCGGGTAGCGG
---------+---------+---------+---------+---------+---------+ 67
PBL01_0086_C04.b : CGTCTTTGAGAAGCGGTGGTGGGTGCTGAGGTGGTGGATGCGGGCGTGAGCGGGTAGCGG
LVR01_0051_E04.b :
CLNT1_0003_F09.b :
CLNT1_0003_H04.b :
20110601C-010012 : AAGTGTGCGGACGTCCCCTCCTCCCCCGAAGCTGATCTGCGGATCTCATCCCCGGGCCTC
---------+---------+---------+---------+---------+---------+ 127
PBL01_0086_C04.b : AAGTGTGCGGACGTCCCCTCCTCCCCCGAAGCTGATCTGCGGATCTCATCCCCGGGCCTC
LVR01_0051_E04.b :
CLNT1_0003_F09.b :
CLNT1_0003_H04.b :
20110601C-010012 : GCCCCTCGCCTTCCCCAAACCCCGTCCACTCCCCTTTCATTGCTCCGGGAGCCGTCGGGG
---------+---------+---------+---------+---------+---------+ 187
PBL01_0086_C04.b : GCCCCTCGCCTTCCCCAAACCCCGTCCACTCCCCTTTCATTGCTCCGGGAGCCGTCGGGG
LVR01_0051_E04.b : tgggggtgtttttttcgcttagtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0003_F09.b : gggatactatagcgnacgxxxxxxxxxxxx
CLNT1_0003_H04.b : ngtatacgttcagcgnacgxxxxxxxxxxxxx
20110601C-010012 : CTGTTTCCCCTTTGGGAACGGAAAGGTACCGCAGAGGCTTAGAGAGGGGAGGAAGGTGAC
---------+---------+---------+---------+---------+---------+ 247
PBL01_0086_C04.b : CTGTTTCCCCTTTGGGAACGGAAAGGTACCGCAGAGGCTTAGAGAGGGGAGGAAGGTGAC
LVR01_0051_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggaccagtaggctgcaagtgcc
CLNT1_0003_F09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtcagtaggctgcaagtgcc
CLNT1_0003_H04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtcagtaggctgcaagtgcc
20110601C-010012 : ATCAATTTGTGCATCTCCCAGACTAGCACCGAGGCACTGCTTGCCGCTCAGGCCCCGTCG
---------+---------+---------+---------+---------+---------+ 307
PBL01_0086_C04.b : ATCAATTTGTGCATCTCCCAGACTAGCACCGAGGCACTGCTTGCCGCTCAGGCCCCGTCG
LVR01_0051_E04.b : ttcggcagctcatgttgttaccccctcctgcAGGCACTGCTTGCCGCTCAGGCCCCGTCG
CLNT1_0003_F09.b : ttcggcagctcatgttgttaccccctcctgcAGGCACTGCTTGCCGCTCAGGCCCCGTCG
CLNT1_0003_H04.b : ttcggcagctcatgttgttaccccctcctgcAGGCACTGCTTGCCGCTCAGGCCCCGTCG
20110601C-010012 : GATTGCCTGTCCTCCGGCAGCTCAGCGCGAAGGTGTGAACTCAGCTTCCTTCAGAGCCTC
---------+---------+---------+---------+---------+---------+ 367
PBL01_0086_C04.b : GATTGCCTGTCCTCCGGCAGCTCAGCGTGAAGGTGTGAACTCAGCTTCCTTCAGAGCCTC
LVR01_0051_E04.b : GATTGCCTGTCCTCCGGCAGCTCAGCGTGAAGGTGTGAACTCAGCTTCCTTCAGAGCCTC
CLNT1_0003_F09.b : GATTGCCTGTCCTCCGGCAGCTCAGCGCGAAGGTGTGAACTCAGCTTCCTTCAGAGCCTC
CLNT1_0003_H04.b : GATTGCCTGTCCTCCGGCAGCTCAGCGCGAAGGTGTGAACTCAGCTTCCTTCAGAGCCTC
20110601C-010012 : CCCGCCATGACCTCCAAGAAGCTGGTGAACTCAGTGGCAGGCTGTGCCGACGATGCCCTT
---------+---------+---------+---------+---------+---------+ 427
PBL01_0086_C04.b : CCCGCCATGACCTCCAAGAAGCTGGTGAACTCAGTGGCAGGCTGTGCCGACGATGCCCTT
LVR01_0051_E04.b : CCCGCCATGACCTCCAAGAAGCTGGTGAACTCAGTGGCAGGCTGTGCCGACGATGCCCTT
CLNT1_0003_F09.b : CCCGCCATGACCTCCAAGAAGCTGGTGAACTCAGTGGCAGGCTGTGCCGACGATGCCCTT
CLNT1_0003_H04.b : CCCGCCATGACCTCCAAGAAGCTGGTGAACTCAGTGGCAGGCTGTGCCGACGATGCCCTT
20110601C-010012 : GCTGGCCTGGTGGCCTGCAACCCCAGCCTGCAGCTCCTGCAAGGCCACCGAGTGGCCCTC
---------+---------+---------+---------+---------+---------+ 487
PBL01_0086_C04.b : GCTGGCCTGGTGGCCTGCAACCCCAGCCTGCAGCTCCTGCAAGGCCACCGAGTGGCCCTC
LVR01_0051_E04.b : GCTGGCCTGGTGGCCTGCAACCCCAGCCTGCAGCTCCTGCAAGGCCACCGAGTGGCCCTC
CLNT1_0003_F09.b : GCTGGCCTGGTGGCCTGCAACCCCAGCCTGCAGCTCCTGCAAGGCCACCGAGTGGCCCTC
CLNT1_0003_H04.b : GCTGGCCTGGTGGCCTGCAACCCCAGCCTGCAGCTCCTGCAAGGCCACCGAGTGGCCCTC
20110601C-010012 : CGTTCTGACCTGGACAGTCTCAAGGGCCGGGTGGCCCTACTGTCGGGTGGGGGCTCTGGC
---------+---------+---------+---------+---------+---------+ 547
PBL01_0086_C04.b : CGTTCTGACCTGGACAGTCTCAAGGGCCGGGTGGCCCTACTGTCGGGTGGGGGCTCTGGC
LVR01_0051_E04.b : CGTTCTGACCTGGACAGTCTCAAGGGCCGGGTGGCCCTACTGTCGGGTGGGGGCTCTGGC
CLNT1_0003_F09.b : CGTTCTGACCTGGACAGTCTCAAGGGCCGGGTGGCCCTACTGTCGGGTGGGGGCTCTGGC
CLNT1_0003_H04.b : CGTTCTGACCTGGACAGTCTCAAGGGCCGGGTGGCCCTACTGTCGGGTGGGGGCTCTGGC
20110601C-010012 : CATGAGCCTGCCCATGCCGGGTTCATAGGGAAGGGCATGCTCACAGGGGTCATCGCAGGA
---------+---------+---------+---------+---------+---------+ 607
PBL01_0086_C04.b : CATGAGCCTGCCCATGCCGGGTTCATAGGGAAGGGCATGCTCACAGGGGTCATCGCAGGA
LVR01_0051_E04.b : CATGAGCCTGCCCATGCCGGGTTCATAGGGAAGGGCATGCTCACAGGGGTCATCGCAGGA
CLNT1_0003_F09.b : CATGAGCCTGCCCATGCCGGGTTCATAGGGAAGGGCATGCTCACAGGGGTCATCGCAGGA
CLNT1_0003_H04.b : CATGAGCCTGCCCATGCCGGGTTCATAGGGAAGGGCATGCTCACAGGGGTCATCGCAGGA
20110601C-010012 : GCCGTGTTCACCTCCCCGGCAGTGGGCAGCATCCTGGCGGCCATCAGGGCAGTGGCCCAG
---------+---------+---------+---------+---------+---------+ 667
PBL01_0086_C04.b : GCCGTGTTCACCTCCCCGGCAGTGGGCAGCATCCTGGCGGCCATCAGGGCAGTGGCCCAG
LVR01_0051_E04.b : GCCGTGTTCACCTCCCCGGCAGTGGGCAGCATCCTGGCGGCCATCAGGGCAGTGGCCCAG
CLNT1_0003_F09.b : GCCGTGTTCACCTCCCCGGCAGTGGGCAGCATCCTGGCGGCCATCAGGGCAGTGGCCCAG
CLNT1_0003_H04.b : GCCGTGTTCACCTCCCCGGCAGTGGGCAGCATCCTGGCGGCCATCAGGGCAGTGGCCCAG
20110601C-010012 : GCGGGCACAGTGGGGACCCTCCTCATCGTGAAGAACTACACTGGGGATCGGCTCAACTTC
---------+---------+---------+---------+---------+---------+ 727
PBL01_0086_C04.b : GCGGGCACAGTGGGGACCCTCCTCATCGTGAAGAACTACACTGGGGATCGGCTCAACTTC
LVR01_0051_E04.b : GCGGGCACAGTGGGGACCCTCCTCATCGTGAAGAACTACACTGGGGATCGGCTCAACTTC
CLNT1_0003_F09.b : GCGGGCACAGTGGGGACCCTCCTCATCGTGAAGAACTACACTGGGGATCGGCTCAACTTC
CLNT1_0003_H04.b : GCGGGCACAGTGGGGACCCTCCTCATCGTGAAGAACTACACTGGGGATCGGCTCAACTTC
20110601C-010012 : GGCCTGGCCCGGGAGCAGGCCCGGGCAGAGGGCATCCCCGTGGAGATGGTGGTCGTTGGG
---------+---------+---------+---------+---------+---------+ 787
PBL01_0086_C04.b : GGGCTGGCCCGGGAGCAGGCCCGGGCAGAGGGCATCCCCGTGGAGATGGTGGTCGTTGGG
LVR01_0051_E04.b : GGGCTGGCCCGGGAGCAGGCCCGGGCAGAGGGCATCCCCGTGGAGATGGTGGTCGTTGGG
CLNT1_0003_F09.b : GGCCTGGCCCGGGAGCAGGCCCGGGCAGAGGGCATCCCCGTGGAGATGGTGGTCGTTGGG
CLNT1_0003_H04.b : GGCCTGGCCCGGGAGCAGGCCCGGGCAGAGGGCATCCCCGTGGAGATGGTGGTCGTTGGG
20110601C-010012 : GACGACAGCGCCTTCACCGTCCTGAAGAAGGCGGGCCGGCGGGGGCTCTGTGGCACGGTG
---------+---------+---------+---------+---------+---------+ 847
PBL01_0086_C04.b : GACGACAGCGCCTTCACCGTCCTGAAGAAAGCGGGCCGGCGGGGGCTCTGTGGCACGGTG
LVR01_0051_E04.b : GACGACAGCGCCTTCACCGTCCTGAAGAAGGCGGGCCGGCGGGGGCTCTGTGGCACGGTG
CLNT1_0003_F09.b : GACGACAGCGCCTTCACCGTCCTGAAGAAGGCGGGCCGGCGGGGGCTCTGTGGCACGGTG
CLNT1_0003_H04.b : GACGACAGCGCCTTCACCGTCCTGAAGAAGGCGGGCCGGCGGGGGCTCTGTGGCACGGTG
20110601C-010012 : CTCATACACAAGGTGGCAGGTGCCCTGGCTGAGGCAGGTGTGGGGCTGGAGGAGATCACG
---------+---------+---------+---------+---------+---------+ 907
PBL01_0086_C04.b : CTCATACANCAGGTGGCAGGTGCCCTGNCTGANGCANGTGTGGGGCTGGGAGAGATCACG
LVR01_0051_E04.b : CTCATACACAAGGTGGCAGGTGCCCTGGCTGAGGCAGGTGTGGGGCTGGAGGAGATCACG
CLNT1_0003_F09.b : CTCATACACAAGGTGGCAGGTGCCCTGGCTGAGGCAGGTGTGGGGCTGGAGGAGATCACG
CLNT1_0003_H04.b : CTCATACACAAGGTGGCAGGTGCCCTGGCTGAGGCAGGTGTGGGGCTGGAGGAGATCACG
20110601C-010012 : AATCGGGTGAGCGTGGTCGCCAAGGCCATGGGAACCCTGGGAGTGAGCCTGTCCTCCTGC
---------+---------+---------+---------+---------+---------+ 967
PBL01_0086_C04.b : AATCGGGTGAGCGTGGTCGCCA*GGCCATGGGAACCCTGGGAGTGAGCCTGTCCTCCTGC
LVR01_0051_E04.b : AATCGGGTGAGCGTGGTCGCCAAGGCCATGGGAACCCTGGGAGTGAGCCTGTCCTCCTGC
CLNT1_0003_F09.b : AATCGGGTGAGCGTGGTCGCCAAGGCCATGGGAACCCTGGGAGTGAGCCTGTCCTCCTGC
CLNT1_0003_H04.b : AATCGGGTGAGCGTGGTCGCCAAGGCCATGGGAACCCTGGGAGTGAGCCTGTCCTCCTGC
20110601C-010012 : AGCGTCCCCGGTTCCAGACCCACCTTTGAGCTCTCAGCCGATGAGGTGGAGCTGGGCCTG
---------+---------+---------+---------+---------+---------+ 1027
PBL01_0086_C04.b : AGCGTCCCCGGTTCagacccaccttgagctctcacccaatgagtggactgggctggggat
LVR01_0051_E04.b : AGCGTCCCCGGTTCCAGACCCACCTTTGAGCTCTCAGCCGATGAGGTGGAGCTGGGCCTG
CLNT1_0003_F09.b : AGCGTCCCCGGTTCCAGACCCACCTTTGAGCTCTCAGCCGATGAGGTGGAGCTGGGCCTG
CLNT1_0003_H04.b : AGCGTCCCCGGTTCCAGACCCACCTTTGAGCTCTCAGCCGATGAGGTGGAGCTGGGCCTG
20110601C-010012 : GGGATCCACGGGGAGGCTGGCGTGCTCCGGATAAAGATGGGCACCGCCGACGAGATTGTG
---------+---------+---------+---------+---------+---------+ 1087
PBL01_0086_C04.b : cacggggagctggctgctccgataagatggcaccgcgacgagatgtggcccatgctgaac
LVR01_0051_E04.b : GGGATCCACGGGGAGGCTGGCGTGCTCCGGATAAAGATGGGCAaccgccgacgagattgt
CLNT1_0003_F09.b : GGGATCCACGGGGAGGCTGGCGTGCTCCGGATAAAGATGGCAACCGCCGACGAGATTGTG
CLNT1_0003_H04.b : GGGATCCACGGGGAGGCTGGCGTGCTCCGGATAAAGATGGGCACCGCCGACGAGATTGTG
20110601C-010012 : GCGCACATGCTGAACCACATGACAGACTCCT.............................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : aatgacgactcctcaggggtcacgggccggcatctggtctcatgggctgaggtcaaaccg
LVR01_0051_E04.b : ngcgcatattgctgaaccacgtgacaaactcctccaatgtgtcccacgtgcccatgcagt
CLNT1_0003_F09.b : GCGCACATGCTGAAACACATGACAGACTCCTccnatgtgtcccacgtgcccgtgcagtct
CLNT1_0003_H04.b : GCGCACATGCTGAACCACATGACAGACTCCTccaatgtgtcccacgtggccctgcagtct
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : ggtggctcctactgaactggcttaaccaaccccttccctttggaggccccgggaaatgnc
LVR01_0051_E04.b : ctgggttcctcatgggggctgatgggcaacaaccctgggtggccctctcaaacctggaaa
CLNT1_0003_F09.b : ggctcctcagtggtgctgatggtcaacaacctgggtgggctctcttacctgaaactggnc
CLNT1_0003_H04.b : ggctcctcagtgttgctgatgggcaacaacctgggtggcctctcctacctggaactgggc
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : tgcctggggcactctttccccgaaaacgggctttcccctctggggaaaccccgaataata
LVR01_0051_E04.b : ctggggcatcctaacccaaacccgcctttccccctttctgggaagggcccccggggggtg
CLNT1_0003_F09.b : atcataaccgaagccgctgtccgctttctggagggcccggggtgaaaatgcccgtgccct
CLNT1_0003_H04.b : tcatagccgaccccctgtccgctttctgaagggcccgggggaaaaatgcccgtgccctat
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : gcacccccaccgcctaggcagtctttgggagaaacggcccttacccagctgatttgggca
LVR01_0051_E04.b : aa
CLNT1_0003_F09.b : agtgggcacctcctgtcagccttgaaatagctggggtcctctcaccttttgtgggggaaa
CLNT1_0003_H04.b : tgggacacttcttgcacccctggaaaggctgggttcccctaacctttggcgggggaaaaa
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : ccaaaagggtgggggtcccggggaaaatccccccggacccccccccgggggaaccccccc
LVR01_0051_E04.b :
CLNT1_0003_F09.b : acccttctggacctgaaaatgccaaaccccgcaaaaccttggcaaatgggcacaggccct
CLNT1_0003_H04.b : cccctctgaaattaaaatgccgaacccccacaaaccgggcctaagggccaaggttcttta
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b : ctccaaaacctcaccccacttggtccg
LVR01_0051_E04.b :
CLNT1_0003_F09.b : gtaatggcgaaaaggacacggcccccctgcaacccccgaggtctgtatcccggttggagg
CLNT1_0003_H04.b : atggcggaaagaaaccggccccctgccaaccccggagtccagagcccggggagaggccca
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b :
LVR01_0051_E04.b :
CLNT1_0003_F09.b : ggccacctcaaaaatgtgggggtggaaggggtgccaccctcgggctgagaaattaattcc
CLNT1_0003_H04.b : cccaaaaagtgggtggggtgagggtggacacctcggcctaaaaactataatcctaacccc
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b :
LVR01_0051_E04.b :
CLNT1_0003_F09.b : gaaccctctcgaagagatagcccaccccccggtttcaaatatgggggagagaaaccccct
CLNT1_0003_H04.b : tcggaggatatgaccccacaccttcgtaaatattgggtgtggaaaaccccccttcgcctt
20110601C-010012 : ............................................................
---------+---------+---------+---------+---------+---------+ 1118
PBL01_0086_C04.b :
LVR01_0051_E04.b :
CLNT1_0003_F09.b : tcgctttctttttctcg
CLNT1_0003_H04.b : tttttc