Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-010070

Sequence: [FASTA format sequence] GCGAGCGCGC GCGCACGTGG GGCCGGGCGG AGAGAGGGAC CGCCAAGAGT AGTGAGCCCT TCCGCGGGAA TGGGTGAATT TAAGGTCCAT CGAGTACGTT TCTTTAATTA TGTTCCATCA GGGATCCGTT GTGTGGCTTA CAATAACCAG TCGAACAGAT TGGCTGTTTC ACGAACAGAT GGCACTGTAG AAATTTATAA TTTGTCAGCA AACTACTTTC AGGAGAAATT TTTCCCAGGT CATGAGTCTC GGGCTACAGA AGCTCTGTGC TGGGCAAAAG GACAACGGCT GTTTAGTGCC GGACTCAACG GAGAGATTAT TGAGTATGAT TTGCAGGCCT TAAATGTCAA GTATGCTGTG GATGCCTTTG GAGGACCCAT TTGGAGCATG GCTGCCAGCC CCAGTGGCTC CCAACTTTTG GTTGGCTGTG AAGATGGATC TGTGAAACTA TTTCAGATCA CCCCAGACAA AATCCAATTT GAAAGAAATT TCGATCGGCA GAAAAGTCGA ATCCTGAGTC TCAGCTGGCA TCCGTCTGGT ACCCACATTG CAGCTGGTTC CATAGACTAC ATTAGTGTGT TTGATGTCAA ATCAGGGAGC GCTATTCATA AGATGCTTGT GGATAGGCAG TATATGGGTG TGTCTAAGCG GAAGTGTATC ATATGGGGCG TGGCCTTTTT GTCTGATGGC ACGGTCATAA GTGTGGACTC TGCTGGGAAG GTGCAGTTCT GGGACTCAGC AACTGGGACA CTCGTGAAGA ACCATCTCAT CGCAAATGCT GATGTGCAGT CCATTGCCAT ATCTGATCAA GAAGACAGTT TCGTGGTGGG CACGGCCGAG GGGACAGTGT TCCATTTTCA GCTGGTCTCT GTGACTTCCA GCAGCAGTGA AAAGCAGTGG GTGCGGACGA AGCCATTTCA GCATCACACT CATGATGTGC GAGCTGTGGC CCACAGCCCC ACAGCACTGA TCTCTGGAGG CACCGACACC CACTTAGTCA TTCGCCCTCT CATGGAGAAG GTGGAAGTGA AGAATTATGA TGCTGCTCTC CGAAAAATCA CTTTTCCCCA TCGACGTCTT GTTTTCTGTG CAAAAAAGAA GCAGCTTCTC CTCTTCCAGT TTGCTCATCA TTTGGAACTT TGGCGACTGG GATCCACAGT TGCAACAGGA AAGCATGGGG ATACCCTTCC ACTCTCTAAA AATGCAGATC ATCTACTTCA CCTCAAGACA AAGGCCCCGA GAACATCATT TGCAGCTGTA TCTCTCCATG TGGAAAGTGG GTGGGCTATT CTACAGCTT

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
CIRH1A cirhin [Homo sapiens]. 759 0.0 O

WDR61 WD repeat-containing protein 61 [Homo sapiens]. 57 4e-08 O

SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein [Homo sapiens]. 54.7 2e-07

EML5 echinoderm microtubule-associated protein-like 5 [Homo sapiens]. 53.1 5e-07

Locus	Definition	Score	E value	FL
CIRH1A	cirhin [Homo sapiens].	759	0.0	O
WDR61	WD repeat-containing protein 61 [Homo sapiens].	57	4e-08	O
SNRNP40	U5 small nuclear ribonucleoprotein 40 kDa protein [Homo sapiens].	54.7	2e-07
EML5	echinoderm microtubule-associated protein-like 5 [Homo sapiens].	53.1	5e-07

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Cirh1a cirhin [Mus musculus]. 729 0.0 O

Wdr61 WD repeat-containing protein 61 isoform a [Mus musculus]. 57.8 2e-08 O

Wdr61 WD repeat-containing protein 61 isoform a [Mus musculus]. 57.8 2e-08 O

Snrnp40 U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus]. 55.5 9e-08

Wdr61 WD repeat-containing protein 61 isoform b [Mus musculus]. 53.5 4e-07 O

Eml5 echinoderm microtubule-associated protein-like 5 [Mus musculus]. 52.8 6e-07

Locus	Definition	Score	E value	FL
Cirh1a	cirhin [Mus musculus].	729	0.0	O
Wdr61	WD repeat-containing protein 61 isoform a [Mus musculus].	57.8	2e-08	O
Wdr61	WD repeat-containing protein 61 isoform a [Mus musculus].	57.8	2e-08	O
Snrnp40	U5 small nuclear ribonucleoprotein 40 kDa protein [Mus musculus].	55.5	9e-08
Wdr61	WD repeat-containing protein 61 isoform b [Mus musculus].	53.5	4e-07	O
Eml5	echinoderm microtubule-associated protein-like 5 [Mus musculus].	52.8	6e-07

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC489738 PREDICTED: similar to Cirhin isoform 2 [Canis familiaris]. 763 0.0 O

LOC489738 PREDICTED: similar to Cirhin isoform 3 [Canis familiaris]. 763 0.0 O

LOC479068 PREDICTED: similar to WD repeat domain 61 isoform 1 [Canis familiaris]. 56.2 7e-08 O

LOC611914 PREDICTED: similar to WD-repeat protein 57 [Canis familiaris]. 54.7 2e-07

LOC611043 PREDICTED: similar to WD repeat domain 61 [Canis familiaris]. 52.4 1e-06 O

LOC490064 PREDICTED: similar to transducin beta-like 3 [Canis familiaris]. 51.6 2e-06

LOC490824 PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 1 [Canis familiaris]. 51.2 2e-06

LOC490824 PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 3 [Canis familiaris]. 51.2 2e-06

LOC490824 PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 2 [Canis familiaris]. 51.2 2e-06

Locus	Definition	Score	E value	FL
LOC489738	PREDICTED: similar to Cirhin isoform 2 [Canis familiaris].	763	0.0	O
LOC489738	PREDICTED: similar to Cirhin isoform 3 [Canis familiaris].	763	0.0	O
LOC479068	PREDICTED: similar to WD repeat domain 61 isoform 1 [Canis familiaris].	56.2	7e-08	O
LOC611914	PREDICTED: similar to WD-repeat protein 57 [Canis familiaris].	54.7	2e-07
LOC611043	PREDICTED: similar to WD repeat domain 61 [Canis familiaris].	52.4	1e-06	O
LOC490064	PREDICTED: similar to transducin beta-like 3 [Canis familiaris].	51.6	2e-06
LOC490824	PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 1 [Canis familiaris].	51.2	2e-06
LOC490824	PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 3 [Canis familiaris].	51.2	2e-06
LOC490824	PREDICTED: similar to echinoderm microtubule associated protein like 5 isoform 2 [Canis familiaris].	51.2	2e-06

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
CIRH1A cirhin [Bos taurus]. 758 0.0 O

CIRH1A PREDICTED: spermatid WD-repeat protein-like [Bos taurus]. 758 0.0 O

WDR61 WD repeat-containing protein 61 [Bos taurus]. 57 4e-08 O

SNRNP40 U5 small nuclear ribonucleoprotein 40 kDa protein [Bos taurus]. 54.7 2e-07

TBL3 transducin beta-like protein 3 [Bos taurus]. 51.2 2e-06

EML5 echinoderm microtubule-associated protein-like 5 [Bos taurus]. 50.8 3e-06

Locus	Definition	Score	E value	FL
CIRH1A	cirhin [Bos taurus].	758	0.0	O
CIRH1A	PREDICTED: spermatid WD-repeat protein-like [Bos taurus].	758	0.0	O
WDR61	WD repeat-containing protein 61 [Bos taurus].	57	4e-08	O
SNRNP40	U5 small nuclear ribonucleoprotein 40 kDa protein [Bos taurus].	54.7	2e-07
TBL3	transducin beta-like protein 3 [Bos taurus].	51.2	2e-06
EML5	echinoderm microtubule-associated protein-like 5 [Bos taurus].	50.8	3e-06

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC414432 PREDICTED: cirhin, partial [Sus scrofa]. 295 4e-89 O

WDR61 PREDICTED: WD repeat-containing protein 61 [Sus scrofa]. 57 2e-08 O

EML5 PREDICTED: echinoderm microtubule-associated protein-like 5 [Sus scrofa]. 56.6 3e-08

LOC100624754 PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like [Sus scrofa]. 54.7 1e-07

Locus	Definition	Score	E value	FL
LOC414432	PREDICTED: cirhin, partial [Sus scrofa].	295	4e-89	O
WDR61	PREDICTED: WD repeat-containing protein 61 [Sus scrofa].	57	2e-08	O
EML5	PREDICTED: echinoderm microtubule-associated protein-like 5 [Sus scrofa].	56.6	3e-08
LOC100624754	PREDICTED: u5 small nuclear ribonucleoprotein 40 kDa protein-like [Sus scrofa].	54.7	1e-07

Assembly Members: 4 TOP

Library Plate Loc. Read Name Accession Full Seq.

KDN01 0058 A09 KDN01_0058_A09.b FS675021 AK393452
KDN01 0060 H03 KDN01_0060_H03.b FS675242
OVRT1 0048 C11 OVRT1_0048_C11.b FS690306
UTR01 0059 D02 UTR01_0059_D02.b BP463571

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
635 C 2 0 0.500 W N ACG/T
T 2 0 0.500 ATG/M

Alignment: TOP

20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
KDN01_0058_A09.b :                                          nnnnncctgcggtggctat
KDN01_0060_H03.b :                                              ttttactgctgtggc
UTR01_0059_D02.b : catttggggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0048_C11.b :                                                             


20110601C-010070 : ...................GCGAGCGCGCGCGCACGTGGGGCCGGGCGGAGAGAGGGACC
                   ---------+---------+---------+---------+---------+---------+ 41
KDN01_0058_A09.b : ggacttccggggcagacacGCGAGCGCGCGCGCACGTGGGGCCGGGCGGAGAGAGGGACC
KDN01_0060_H03.b : tctggatccggggcgagcaGCGAGCGCGCGCGCACGTGGGGCCGGGCGGAGAGAGGGACC
UTR01_0059_D02.b : xxxxxxxxxxxxxxxxxxxxxxxxxtactggGCACGTGGGGCCGGGCGGAGAGAGGGACC
OVRT1_0048_C11.b :                                                             


20110601C-010070 : GCCAAGAGTAGTGAGCCCTTCCGCGGGAATGGGTGAATTTAAGGTCCATCGAGTACGTTT
                   ---------+---------+---------+---------+---------+---------+ 101
KDN01_0058_A09.b : GCCAAGAGTAGTGAGCCCTTCCGCGGGAATGGGTGAATTTAAGGTCCATCGAGTACGTTT
KDN01_0060_H03.b : GCCAAGAGTAGTGAGCCCTTCCGCGGGAATGGGTGAATTTAAGGTCCATCGAGTACGTTT
UTR01_0059_D02.b : GCCAAGAGTAGTGAGCCCTTCCGCGGGAATGGGTGAATTTAAGGTCCATCGAGTACGTTT
OVRT1_0048_C11.b :                                                             


20110601C-010070 : CTTTAATTATGTTCCATCAGGGATCCGTTGTGTGGCTTACAATAACCAGTCGAACAGATT
                   ---------+---------+---------+---------+---------+---------+ 161
KDN01_0058_A09.b : CTTTAATTATGTTCCATCAGGGATCCGTTGTGTGGCTTACAATAACCAGTCGAACAGATT
KDN01_0060_H03.b : CTTTAATTATGTTCCATCAGGGATCCGTTGTGTGGCTTACAATAACCAGTCGAACAGATT
UTR01_0059_D02.b : CTTTAATTATGTTCCATCAGGGATCCGTTGTGTGGCTTACAATAACCAGTCGAACAGATT
OVRT1_0048_C11.b :                                                             


20110601C-010070 : GGCTGTTTCACGAACAGATGGCACTGTAGAAATTTATAATTTGTCAGCAAACTACTTTCA
                   ---------+---------+---------+---------+---------+---------+ 221
KDN01_0058_A09.b : GGCTGTTTCACGAACAGATGGCACTGTAGAAATTTATAATTTGTCAGCAAACTACTTTCA
KDN01_0060_H03.b : GGCTGTTTCACGAACAGATGGCACTGTAGAAATTTATAATTTGTCAGCAAACTACTTTCA
UTR01_0059_D02.b : GGCTGTTTCACGAACAGATGGCACTGTAGAAATTTATAATTTGTCAGCAAACTACTTTCA
OVRT1_0048_C11.b :                                                             


20110601C-010070 : GGAGAAATTTTTCCCAGGTCATGAGTCTCGGGCTACAGAAGCTCTGTGCTGGGCAAAAGG
                   ---------+---------+---------+---------+---------+---------+ 281
KDN01_0058_A09.b : GGAGAAATTTTTCCCAGGTCATGAGTCTCGGGCTACAGAAGCTCTGTGCTGGGCAAAAGG
KDN01_0060_H03.b : GGAGAAATTTTTCCCAGGTCATGAGTCTCGGGCTACAGAAGCTCTGTGCTGGGCAAAAGG
UTR01_0059_D02.b : GGAGAAATTTTTCCCAGGTCATGAGTCTCGGGCTACAGAAGCTCTGTGCTGGGCAAAAGG
OVRT1_0048_C11.b :                                                             


20110601C-010070 : ACAACGGCTGTTTAGTGCCGGACTCAACGGAGAGATTATTGAGTATGATTTGCAGGCCTT
                   ---------+---------+---------+---------+---------+---------+ 341
KDN01_0058_A09.b : ACAACGGCTGTTTAGTGCCGGACTCAACGGAGAGATTATTGAGTATGATTTGCAGGCCTT
KDN01_0060_H03.b : ACAACGGCTGTTTAGTGCCGGACTCAACGGAGAGATTATTGAGTATGATTTGCAGGCCTT
UTR01_0059_D02.b : ACAACGGCTGTTTAGTGCCGGACTCAACGGAGAGATTATTGAGTATGATTTGCAGGCCTT
OVRT1_0048_C11.b :                                                             


20110601C-010070 : AAATGTCAAGTATGCTGTGGATGCCTTTGGAGGACCCATTTGGAGCATGGCTGCCAGCCC
                   ---------+---------+---------+---------+---------+---------+ 401
KDN01_0058_A09.b : AAATGTCAAGTATGCTGTGGATGCCTTTGGAGGACCCATTTGGAGCATGGCTGCCAGCCC
KDN01_0060_H03.b : AAATGTCAAGTATGCTGTGGATGCCTTTGGAGGACCCATTTGGAGCATGGCTGCCAGCCC
UTR01_0059_D02.b : AAATGTCAAGTATGCTGTGGATGCCTTTGGAGGACCCATTTGGAGCATGGCTGCCAGCCC
OVRT1_0048_C11.b :                                   nnnnccgtctgcgnacgxxxxxxxxx


20110601C-010070 : CAGTGGCTCCCAACTTTTGGTTGGCTGTGAAGATGGATCTGTGAAACTATTTCAGATCAC
                   ---------+---------+---------+---------+---------+---------+ 461
KDN01_0058_A09.b : CAGTGGCTCCCAACTTTTGGTTGGCTGTGAAGATGGATCTGTGAAACTATTTCAGATCAC
KDN01_0060_H03.b : CAGTGGCTCCCAACTTTTGGTTGGCTGTGAAGATGGATCTGTGAAACTATTTCAGATCAC
UTR01_0059_D02.b : CAGTGGCTCCCAACTTTTGGTTGGCTGTGAAGATGGATCTGTGAAACTATTTCAGATCAC
OVRT1_0048_C11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTATTTCAGATCAC


20110601C-010070 : CCCAGACAAAATCCAATTTGAAAGAAATTTCGATCGGCAGAAAAGTCGAATCCTGAGTCT
                   ---------+---------+---------+---------+---------+---------+ 521
KDN01_0058_A09.b : CCCAGACAAAATCCAATTTGAAAGAAATTTCGATCGGCAGAAAAGTCGAATCCTGAGTCT
KDN01_0060_H03.b : CCCAGACAAAATCCAATTTGAAAGAAATTTCGATCGGCAGAAAAGTCGAATCCTGAGTCT
UTR01_0059_D02.b : CCCAGACAAAATCCAATTTGAAAGAAATTTCGATCGGCAGAAAAGTCGAATCCTGAGTCT
OVRT1_0048_C11.b : CCCAGACAAAATCCAATTTGAAAGAAATTTCGATCGGCAGAAAAGTCGAATCCTGAGTCT


20110601C-010070 : CAGCTGGCATCCGTCTGGTACCCACATTGCAGCTGGTTCCATAGACTACATTAGTGTGTT
                   ---------+---------+---------+---------+---------+---------+ 581
KDN01_0058_A09.b : CAGCTGGCATCCGTCTGGTACCCACATTGCAGCTGGTTCCATAGACTACATTAGTGTGTT
KDN01_0060_H03.b : CAGCTGGCATCCGTCTGGTACCCACATTGCAGCTGGTTCCATAGACTACATTAGTGTGTT
UTR01_0059_D02.b : CAGCTGGCATCCGTCTGGTACCCACATTGCAGCTGGTTCCATAGACTACATTAGTGTGTT
OVRT1_0048_C11.b : CAGCTGGCATCCGTCTGGTACCCACATTGCAGCTGGTTCCATAGACTACATTAGTGTGTT


20110601C-010070 : TGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATATGGGTGT
                   ---------+---------+---------+---------+---------+---------+ 641
KDN01_0058_A09.b : TGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATACGGGTGT
KDN01_0060_H03.b : TGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATACGGGTGT
UTR01_0059_D02.b : TGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATATGGGTGT
OVRT1_0048_C11.b : TGATGTCAAATCAGGGAGCGCTATTCATAAGATGCTTGTGGATAGGCAGTATATGGGTGT


20110601C-010070 : GTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTTTTGTCTGATGGCACGGTCATAAG
                   ---------+---------+---------+---------+---------+---------+ 701
KDN01_0058_A09.b : GTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTTTTGTCTGATGGCACGGTCATAAG
KDN01_0060_H03.b : GTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTTTTGTCTGATGGCACGGTCATAAG
UTR01_0059_D02.b : GTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTCTTGTCTGATGGCACGGTCATAAG
OVRT1_0048_C11.b : GTCTAAGCGGAAGTGTATCATATGGGGCGTGGCCTTTTTGTCTGATGGCACGGTCATAAG


20110601C-010070 : TGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAA
                   ---------+---------+---------+---------+---------+---------+ 761
KDN01_0058_A09.b : TGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAA
KDN01_0060_H03.b : TGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAA
UTR01_0059_D02.b : TGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAA
OVRT1_0048_C11.b : TGTGGACTCTGCTGGGAAGGTGCAGTTCTGGGACTCAGCAACTGGGACACTCGTGAAGAA


20110601C-010070 : CCATCTCATCGCAAA*TGCTGATGTGCAGT*CCATT*GCCATATCTGATCAAGAAGACAG
                   ---------+---------+---------+---------+---------+---------+ 818
KDN01_0058_A09.b : CCATCTCATCGCAAA*TGCTGATGTGCAGT*CCATT*GCCATATCTGATCAAGAAGACAG
KDN01_0060_H03.b : CCATCTCATCGCAAA*TGCTGATGTGCAGT*CCATT*GCCATATCTGATCAAGAAGACAG
UTR01_0059_D02.b : CCATCTCATCGCAAAATGCTGATGTGCAGTCCCATTTGCCATATCTGATCAAGAAGACAG
OVRT1_0048_C11.b : CCATCTCATCGCAAA*TGCTGATGTGCAGT*CCATT*GCCATATCTGATCAAGAAGACAG


20110601C-010070 : TTTCGTGGTGGGCACGGCC*GAGGGGACAGTGTTCCATTTTCAGCTGGTCTCTGTGACTT
                   ---------+---------+---------+---------+---------+---------+ 877
KDN01_0058_A09.b : TTTCGTGGTGGGCACGGCC*GAGGGGACAGTGTTCCATTTTCAGCTGGTCTCTGTGACTT
KDN01_0060_H03.b : TTTCGTGGTGGGCACGGCC*GAGGGGACAGTGTTCCATTTTCAGCTGGTCTCTGTGACTT
UTR01_0059_D02.b : TTTCGTGGTGGGCACGGCCCGAGGGGACAGTGTTCCATTTTCACCTGGTCTCTGTGACTT
OVRT1_0048_C11.b : TTTCGTGGTGGGCACGGCC*GAGGGGACAGTGTTCCATTTTCAGCTGGTCTCTGTGACTT


20110601C-010070 : CCAGCAGCAGTGAAAAGCAGTGGGTGCGGACGAAGCCATTTCAGCATCACACTCATGATG
                   ---------+---------+---------+---------+---------+---------+ 937
KDN01_0058_A09.b : CCAGCAGCAGTGAAAAGCAGTGGGTGCGGACGAAGCCATTTCAGCATCACACTCATGATG
KDN01_0060_H03.b : CCAGCAGCAGTGAAAAGCAGTGGGTGCGGACGAAGCCATTTCAGCATCACACTCATGATG
UTR01_0059_D02.b : CCA*CAGCAGTGAAAAGCAGTGGGTGCGGACCAAGCCATTTCAccattcaacctcttgat
OVRT1_0048_C11.b : CCAGCAGCAGTGAAAAGCAGTGGGTGCGGACGAAGCCATTTCAGCATCACACTCATGATG


20110601C-010070 : TGCGAGCTGTGGCCCACAGCCCCACAGCACTGATCTCTGGAGGCACCGACACCCACTTAG
                   ---------+---------+---------+---------+---------+---------+ 997
KDN01_0058_A09.b : TGCGAGCTGTGGCCCACAGCCCCACAGCACTGATCTCtggnagcaccgacaccacttagt
KDN01_0060_H03.b : TGCGAGCTGTGGCCCACAGCCCCACAGCACTGATCTCTGGNAGCACgaacaccacttagt
UTR01_0059_D02.b : gtgcgagctgtggcccaaacccccccagcactgatttttggaaggccccaacccccactt
OVRT1_0048_C11.b : TGCGAGCTGTGGCCCACAGCCCCACAGCACTGATCTCTGGAGGCACCGACACCCACTTAG


20110601C-010070 : TCATTCGCCCTCTCATGGAGAAGGTGGAAGTGAAGAATTATGATGCTGCTCTCCGAAAAA
                   ---------+---------+---------+---------+---------+---------+ 1057
KDN01_0058_A09.b : cattcgccctctcaggnaaanggtggaagtgaaaaattatgatgctgctctccgaaaatc
KDN01_0060_H03.b : catcgccctctcatgaagaaggtggagtgaagaatatgatgctgctctcgaaaaatcact
UTR01_0059_D02.b : agtcctttcgccctcctctggaaaaaggggaaagtaaaaaaattttaaattccggttccc
OVRT1_0048_C11.b : TCATTCGCCCTCTCATGGAGAAGGTGGAAGTGAAGAATTATGATGCTGCTCTCCGAAAAA


20110601C-010070 : TCACTTTTCCCCATCGACGTCTTGTTTTCTGTGCAAAAAAGAAGCAGCTTCTCCTCTTCC
                   ---------+---------+---------+---------+---------+---------+ 1117
KDN01_0058_A09.b : actttccccatcgacgtcttgtttctgtgcaaaaagnagcagcttctctcntccagttgc
KDN01_0060_H03.b : tttcccatcgacgtctggttttctgttgcaaaaaaagcagctcccctctccaagttgccc
UTR01_0059_D02.b : ccaaaaaaataatttttttcccccttcaactttcttttttttcttttgcaaaaaaaaaaa
OVRT1_0048_C11.b : TCACTTTTCCCCATCGACGTCTTGTTTTCTGTGCAAAAAAGAAGCAGCTTCTCCTCTTCC


20110601C-010070 : AGTTTGCTCATCATTTGGAACTTTGGCGACTGGGATCCACAGTTGCAACAGGAAAGCATG
                   ---------+---------+---------+---------+---------+---------+ 1177
KDN01_0058_A09.b : catcattgggaactttggcgacgggatccacgtttgcacaggaagcatgggataccttcc
KDN01_0060_H03.b : tcatttggaacttggcaatgggatcccattgccacaggaaactggggataccttccttcc
UTR01_0059_D02.b : aaccaccttttccccccttt                                       
OVRT1_0048_C11.b : AGTTTGCTCATCATTTGGAACTTTGGCGACTGGGATCCACAGTTGCAACAGGAAAGCATG


20110601C-010070 : GGGATACCCTTCCACTCTCTAAAAATGCAGATCATCTACTTCACCTCAAGACAAAGGCCC
                   ---------+---------+---------+---------+---------+---------+ 1237
KDN01_0058_A09.b : ctcctaaaatgcaataatcacttcctcagaaaagggcccgaaaatcattgcactttcctc
KDN01_0060_H03.b : taaaagcgaattctcactcccctcagaaaaggccccagaaatcaatgggaggtttccccc
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : GGGATACCCTTCCACTCTCTAAAAATGCAGATCATCTACTTCACCTCAAGACAAAGGCCC


20110601C-010070 : CGAGAACATCATTTGCAGCTGTATCTCTCCATGTGGAAAGTGGGTGGGCTATTCTACAGC
                   ---------+---------+---------+---------+---------+---------+ 1297
KDN01_0058_A09.b : cagtggaaatgggggcaattcagctccccgtttcccccgtgagatacacaaaaggaaccc
KDN01_0060_H03.b : gtggaaatgggggccattccacactccgggttttcctcctggaataacaagaaaggaaac
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : CGAGAACATCATTTGCAGCTGTATCTCTCCATGTGGAAAGTGGGTGGGCTATTCTACAGC


20110601C-010070 : TT..........................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b : caaggttcaaagccccctcccccgccctattgtttgaaaaacacttggggaagagagctc
KDN01_0060_H03.b : ccagggttcaaggcgcgtctccgcgccccaattttttgtagaaacaaacttgggggaaaa
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : TTctcggttttttctctatcgtttgaattatgaccatgacagcgttagcctccaagggtt


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b : atatgcggtgggacacacccttcttccccggga                          
KDN01_0060_H03.b : ggtctatt                                                   
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : ttcaaatgccagcgttccttccctctggctttcatattttgttttctgaagatcatcaaa


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b :                                                             
KDN01_0060_H03.b :                                                             
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : actccttggggcatcagtcaaggtccctaatatccatcggctgctggagggactttcaaa


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b :                                                             
KDN01_0060_H03.b :                                                             
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : actgatacttttcagccttatcaggaaggggaatcctttttttttgggcatccatccaaa


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b :                                                             
KDN01_0060_H03.b :                                                             
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : ggaattgccaactgcccaggacccatggggatccctggttcacaaggaaaacttaaagct


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b :                                                             
KDN01_0060_H03.b :                                                             
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : ccgggccggggccggttaaatttcccgggaggtttggggaacccccaaaaaaaactgttt


20110601C-010070 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1299
KDN01_0058_A09.b :                                                             
KDN01_0060_H03.b :                                                             
UTR01_0059_D02.b :                                                             
OVRT1_0048_C11.b : ttttctttggacaaggt