Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-012149

Sequence: [FASTA format sequence] GAGTGCTAAG GAGGCGGGCG CCGCCGCTTC TGATTCATTG TCTTGACGAG AGCATCCTCA GCGGGCAGTC TCCGGCTCCT CCAGCTCCTT CCTCCGCCTC CTCCTCTCCC TCCTCCGTTT GGGGGGTCAC TCCTCTCTCA GCAGCAGGAT GAGCCGGCAG GTGGTCCGTT CCAGCAAGTT CCGCCACGTG TTTGGACAGC CAGCCAAAGC CGACCAGTGC TATGAGGACG TGCGCGTCTC ACAGACCACC TGGGACAGTG GCTTCTGTGC TGTCAACCCC AAGTTCGTGG CCTTGATCTG TGAGGCCAGC GGGGGCGGGG CCTTCCTGGT ACTGCCCCTG AGCAAGACTG GCCGTGTGGA CAAGAATGCG CCTATGGTCT GTGGCCACAC GGCGCCCGTG CTGGACATCG CCTGGTGCCC GCACAATGAT AACGTCATTG CCAGTGGCTC CGAAGATTGC ACGGTCATGG TGTGGGAGAT CCCTGACGGG GGTCTGACGC TGCCCCTGCG GGAGCCTGTC GTCACCCTGG AGGGCCACAC CAAGCGCGTG GGCATCGTGG CCTGGCACCC CACGGCCCAG AACGTGCTGC TCAGTGCAGG TTGTGACAAC GTGATCCTGG TGTGGGACGT GGGCACTGGG GCGGCCGTGC TGACGCTGGG CTCGGACGTG CACCCGGACA CAATCTACAG CGTGGACTGG AGCCGAGACG GCGCCCTCAT CTGCACCTCC TGCCGGGACA AGCGAGTTCG CATCATTGAG CCCCGCAAAG GCACCATTGT AGCGGAGAAG GACCGTCCCC ACGAGGGGAC CCGGCCCGTG CGAGCTGTGT TTGTGTCCGA TGGCAAGATC CTGACCACCG GCTTCAGCCG CATGAGTGAG CGGCAGGTGG CGCTGTGGGA CACGAAACAC CTGGAGGAGC CGCTGTCCCT GGCAGAGCTG GACACGAGCA GCGGCGTCCT GCTGCCCTTC TTTACCCCCG AACACAAAAT TGTCTACCTC TGTGGCAAGG GTGACAGCTC TATCCGGTAC TTCGAGATCA CTTCCAAAGC CCCGTTCCTG CACTATCTGT CTATGTTCAG TTCCCAGGAG TCTCAGCGTG GCATGGGCTA CATGCCCAAG CGTGGTCTGG AGGTGAACAA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
CORO1A coronin-1A [Homo sapiens]. 632 0.0 O

CORO1A coronin-1A [Homo sapiens]. 632 0.0 O

CORO1C coronin-1C isoform 1 [Homo sapiens]. 509 e-144 O

CORO1B coronin-1B [Homo sapiens]. 508 e-144 O

CORO1B coronin-1B [Homo sapiens]. 508 e-144 O

CORO6 coronin-6 [Homo sapiens]. 474 e-134 O

CORO2B coronin-2B isoform 1 [Homo sapiens]. 314 8e-86 O

CORO2B coronin-2B isoform 2 [Homo sapiens]. 314 8e-86 O

CORO2B coronin-2B isoform 2 [Homo sapiens]. 314 8e-86 O

CORO2A coronin-2A [Homo sapiens]. 309 3e-84 O

Locus	Definition	Score	E value	FL
CORO1A	coronin-1A [Homo sapiens].	632	0.0	O
CORO1A	coronin-1A [Homo sapiens].	632	0.0	O
CORO1C	coronin-1C isoform 1 [Homo sapiens].	509	e-144	O
CORO1B	coronin-1B [Homo sapiens].	508	e-144	O
CORO1B	coronin-1B [Homo sapiens].	508	e-144	O
CORO6	coronin-6 [Homo sapiens].	474	e-134	O
CORO2B	coronin-2B isoform 1 [Homo sapiens].	314	8e-86	O
CORO2B	coronin-2B isoform 2 [Homo sapiens].	314	8e-86	O
CORO2B	coronin-2B isoform 2 [Homo sapiens].	314	8e-86	O
CORO2A	coronin-2A [Homo sapiens].	309	3e-84	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Coro1a coronin-1A [Mus musculus]. 636 0.0 O

Coro1c coronin-1C [Mus musculus]. 510 e-145 O

Coro1b coronin-1B [Mus musculus]. 504 e-143 O

Coro6 coronin-6 isoform A [Mus musculus]. 488 e-138 O

Coro6 coronin-6 isoform B [Mus musculus]. 471 e-133 O

Coro6 coronin-6 isoform C [Mus musculus]. 404 e-113 O

Coro2b coronin-2B [Mus musculus]. 315 4e-86 O

Coro2a coronin-2A [Mus musculus]. 305 4e-83 O

Coro2a coronin-2A [Mus musculus]. 305 4e-83 O

Coro7 coronin-7 [Mus musculus]. 181 9e-46

Locus	Definition	Score	E value	FL
Coro1a	coronin-1A [Mus musculus].	636	0.0	O
Coro1c	coronin-1C [Mus musculus].	510	e-145	O
Coro1b	coronin-1B [Mus musculus].	504	e-143	O
Coro6	coronin-6 isoform A [Mus musculus].	488	e-138	O
Coro6	coronin-6 isoform B [Mus musculus].	471	e-133	O
Coro6	coronin-6 isoform C [Mus musculus].	404	e-113	O
Coro2b	coronin-2B [Mus musculus].	315	4e-86	O
Coro2a	coronin-2A [Mus musculus].	305	4e-83	O
Coro2a	coronin-2A [Mus musculus].	305	4e-83	O
Coro7	coronin-7 [Mus musculus].	181	9e-46

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC489949 PREDICTED: similar to Coronin-1A (Coronin-like protein p57) (Coronin-like protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) isoform 1 [Canis familiaris]. 627 e-180 O

LOC486318 PREDICTED: similar to Coronin-1C (Coronin-3) (hCRNN4) [Canis familiaris]. 509 e-144 O

LOC476007 PREDICTED: similar to coronin, actin binding protein, 1B isoform 3 [Canis familiaris]. 507 e-144 O

LOC476007 PREDICTED: similar to coronin, actin binding protein, 1B isoform 1 [Canis familiaris]. 507 e-144 O

LOC476007 PREDICTED: similar to coronin, actin binding protein, 1B isoform 4 [Canis familiaris]. 507 e-144 O

LOC491182 PREDICTED: similar to coronin relative protein isoform 1 [Canis familiaris]. 476 e-134 O

LOC476007 PREDICTED: similar to coronin, actin binding protein, 1B isoform 2 [Canis familiaris]. 427 e-119 O

LOC491182 PREDICTED: similar to coronin, actin binding protein 6 isoform C isoform 3 [Canis familiaris]. 407 e-114 O

LOC487618 PREDICTED: similar to Coronin-2B (Coronin-like protein C) (ClipinC) (Protein FC96) [Canis familiaris]. 315 4e-86 O

LOC481625 PREDICTED: similar to coronin, actin binding protein, 2A [Canis familiaris]. 301 6e-82 O

Locus	Definition	Score	E value	FL
LOC489949	PREDICTED: similar to Coronin-1A (Coronin-like protein p57) (Coronin-like protein A) (CLIPINA) (Tryptophan aspartate-containing coat protein) (TACO) isoform 1 [Canis familiaris].	627	e-180	O
LOC486318	PREDICTED: similar to Coronin-1C (Coronin-3) (hCRNN4) [Canis familiaris].	509	e-144	O
LOC476007	PREDICTED: similar to coronin, actin binding protein, 1B isoform 3 [Canis familiaris].	507	e-144	O
LOC476007	PREDICTED: similar to coronin, actin binding protein, 1B isoform 1 [Canis familiaris].	507	e-144	O
LOC476007	PREDICTED: similar to coronin, actin binding protein, 1B isoform 4 [Canis familiaris].	507	e-144	O
LOC491182	PREDICTED: similar to coronin relative protein isoform 1 [Canis familiaris].	476	e-134	O
LOC476007	PREDICTED: similar to coronin, actin binding protein, 1B isoform 2 [Canis familiaris].	427	e-119	O
LOC491182	PREDICTED: similar to coronin, actin binding protein 6 isoform C isoform 3 [Canis familiaris].	407	e-114	O
LOC487618	PREDICTED: similar to Coronin-2B (Coronin-like protein C) (ClipinC) (Protein FC96) [Canis familiaris].	315	4e-86	O
LOC481625	PREDICTED: similar to coronin, actin binding protein, 2A [Canis familiaris].	301	6e-82	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
CORO1A coronin-1A [Bos taurus]. 642 0.0 O

CORO1C coronin-1C [Bos taurus]. 510 e-145 O

CORO1B coronin, actin binding protein, 1B [Bos taurus]. 502 e-142 O

CORO6 coronin-6 [Bos taurus]. 407 e-113 O

LOC615274 PREDICTED: coronin, actin binding protein, 2B-like [Bos taurus]. 314 8e-86 O

CORO2A coronin-2A [Bos taurus]. 302 4e-82 O

LOC615274 PREDICTED: coronin, actin binding protein, 2B, partial [Bos taurus]. 240 2e-63 O

CORO7 coronin-7 [Bos taurus]. 174 1e-43

WDR5 WD repeat-containing protein 5 [Bos taurus]. 72.8 5e-13 O

RBBP4 histone-binding protein RBBP4 [Bos taurus]. 68.2 1e-11

Locus	Definition	Score	E value	FL
CORO1A	coronin-1A [Bos taurus].	642	0.0	O
CORO1C	coronin-1C [Bos taurus].	510	e-145	O
CORO1B	coronin, actin binding protein, 1B [Bos taurus].	502	e-142	O
CORO6	coronin-6 [Bos taurus].	407	e-113	O
LOC615274	PREDICTED: coronin, actin binding protein, 2B-like [Bos taurus].	314	8e-86	O
CORO2A	coronin-2A [Bos taurus].	302	4e-82	O
LOC615274	PREDICTED: coronin, actin binding protein, 2B, partial [Bos taurus].	240	2e-63	O
CORO7	coronin-7 [Bos taurus].	174	1e-43
WDR5	WD repeat-containing protein 5 [Bos taurus].	72.8	5e-13	O
RBBP4	histone-binding protein RBBP4 [Bos taurus].	68.2	1e-11

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
CORO1C PREDICTED: coronin-1C [Sus scrofa]. 509 e-144 O

LOC100511677 PREDICTED: coronin-1B-like [Sus scrofa]. 502 e-142 O

LOC100621483 PREDICTED: LOW QUALITY PROTEIN: coronin-1A-like, partial [Sus scrofa]. 338 3e-93 O

CORO2B PREDICTED: coronin-2B [Sus scrofa]. 314 5e-86 O

LOC100511910 PREDICTED: coronin-2A-like [Sus scrofa]. 307 6e-84 O

LOC100624811 PREDICTED: coronin-6-like [Sus scrofa]. 304 7e-83 O

LOC100627373 PREDICTED: coronin-1C-like, partial [Sus scrofa]. 263 1e-70 O

LOC100620779 PREDICTED: hypothetical protein LOC100620779 [Sus scrofa]. 178 6e-45 O

LOC100513346 PREDICTED: coronin-7-like [Sus scrofa]. 176 3e-44

LOC100516758 PREDICTED: coronin-6-like [Sus scrofa]. 171 9e-43 O

Locus	Definition	Score	E value	FL
CORO1C	PREDICTED: coronin-1C [Sus scrofa].	509	e-144	O
LOC100511677	PREDICTED: coronin-1B-like [Sus scrofa].	502	e-142	O
LOC100621483	PREDICTED: LOW QUALITY PROTEIN: coronin-1A-like, partial [Sus scrofa].	338	3e-93	O
CORO2B	PREDICTED: coronin-2B [Sus scrofa].	314	5e-86	O
LOC100511910	PREDICTED: coronin-2A-like [Sus scrofa].	307	6e-84	O
LOC100624811	PREDICTED: coronin-6-like [Sus scrofa].	304	7e-83	O
LOC100627373	PREDICTED: coronin-1C-like, partial [Sus scrofa].	263	1e-70	O
LOC100620779	PREDICTED: hypothetical protein LOC100620779 [Sus scrofa].	178	6e-45	O
LOC100513346	PREDICTED: coronin-7-like [Sus scrofa].	176	3e-44
LOC100516758	PREDICTED: coronin-6-like [Sus scrofa].	171	9e-43	O

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

ILNT1 0089 F09 ILNT1_0089_F09.b HX233889
MLN01 0100 A06 MLN01_0100_A06.b CJ015674
PBL01 0048 F01 PBL01_0048_F01.b BP156026
PBL01 0085 A01 PBL01_0085_A01.b BW973677
PBL01 0091 B12 PBL01_0091_B12.b BW974232
PBL01 0101 H06 PBL01_0101_H06.b BW975095
THY01 0205 A05 THY01_0205_A05.b BP159869

SNPs: 2 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
208 A 4 0 0.571 W S AAA/K
G 3 0 0.429 AAG/K
493 C 3 0 0.429 W S GGC/G
T 4 0 0.571 GGT/G

Alignment: TOP

20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0205_A05.b : cattttgggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0089_F09.b :                                                       nnnaaa
PBL01_0048_F01.b :                                                             
PBL01_0085_A01.b :                                                             
MLN01_0100_A06.b :                                           nnccttggactatgacxx
PBL01_0091_B12.b :                                                             
PBL01_0101_H06.b :                                                             


20110601C-012149 : ........................GAGTGCTAAGGAGGCGGGCGCCGCCGCTTCTGATTC
                   ---------+---------+---------+---------+---------+---------+ 36
THY01_0205_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxGAGTGCTAAGGAGGCGGGCGCCGCCGCTTCTCATTC
ILNT1_0089_F09.b : gcaggtagacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGATTC
PBL01_0048_F01.b :        naatgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0085_A01.b :       ttaagatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0100_A06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0091_B12.b :      nnnnggatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0101_H06.b :    nnnaagatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-012149 : ATTGTCTTGACGAGAGCATCCTCAGCGGGCAGTCTCCGGCTCCTCCAGCTCCTTCCTCCG
                   ---------+---------+---------+---------+---------+---------+ 96
THY01_0205_A05.b : ATTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
ILNT1_0089_F09.b : ATTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
PBL01_0048_F01.b : xTTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
PBL01_0085_A01.b : xTTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
MLN01_0100_A06.b : xTTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
PBL01_0091_B12.b : xTTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg
PBL01_0101_H06.b : xTTGTCTTGACGAGAGCATCCTCAGCGGGCAGTctccggctcctccagctccttcctccg


20110601C-012149 : CCTCCTCCTCTCCCTCCTCCGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
                   ---------+---------+---------+---------+---------+---------+ 156
THY01_0205_A05.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
ILNT1_0089_F09.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
PBL01_0048_F01.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGCTGAGCCG
PBL01_0085_A01.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
MLN01_0100_A06.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
PBL01_0091_B12.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG
PBL01_0101_H06.b : cctcctcctctccctcctccGTTTGGGGGGTCACTCCTCTCTCAGCAGCAGGATGAGCCG


20110601C-012149 : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAAGCCGACCA
                   ---------+---------+---------+---------+---------+---------+ 216
THY01_0205_A05.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAAGCCGACCA
ILNT1_0089_F09.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAAGCCGACCA
PBL01_0048_F01.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAGGCCGACCA
PBL01_0085_A01.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAGGCCGACCA
MLN01_0100_A06.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAAGCCGACCA
PBL01_0091_B12.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAAGCCGACCA
PBL01_0101_H06.b : GCAGGTGGTCCGTTCCAGCAAGTTCCGCCACGTGTTTGGACAGCCAGCCAAGGCCGACCA


20110601C-012149 : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
                   ---------+---------+---------+---------+---------+---------+ 276
THY01_0205_A05.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
ILNT1_0089_F09.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
PBL01_0048_F01.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
PBL01_0085_A01.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTCCTGTGCTGTCAA
MLN01_0100_A06.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
PBL01_0091_B12.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA
PBL01_0101_H06.b : GTGCTATGAGGACGTGCGCGTCTCACAGACCACCTGGGACAGTGGCTTCTGTGCTGTCAA


20110601C-012149 : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
                   ---------+---------+---------+---------+---------+---------+ 336
THY01_0205_A05.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
ILNT1_0089_F09.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
PBL01_0048_F01.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
PBL01_0085_A01.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
MLN01_0100_A06.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
PBL01_0091_B12.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC
PBL01_0101_H06.b : CCCCAAGTTCGTGGCCTTGATCTGTGAGGCCAGCGGGGGCGGGGCCTTCCTGGTACTGCC


20110601C-012149 : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
                   ---------+---------+---------+---------+---------+---------+ 396
THY01_0205_A05.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
ILNT1_0089_F09.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
PBL01_0048_F01.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
PBL01_0085_A01.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
MLN01_0100_A06.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
PBL01_0091_B12.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC
PBL01_0101_H06.b : CCTGAGCAAGACTGGCCGTGTGGACAAGAATGCGCCTATGGTCTGTGGCCACACGGCGCC


20110601C-012149 : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
                   ---------+---------+---------+---------+---------+---------+ 456
THY01_0205_A05.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
ILNT1_0089_F09.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
PBL01_0048_F01.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
PBL01_0085_A01.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
MLN01_0100_A06.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
PBL01_0091_B12.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA
PBL01_0101_H06.b : CGTGCTGGACATCGCCTGGTGCCCGCACAATGATAACGTCATTGCCAGTGGCTCCGAAGA


20110601C-012149 : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGTCTGACGCTGCCCCTGCGGGAGCC
                   ---------+---------+---------+---------+---------+---------+ 516
THY01_0205_A05.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGTCTGACGCTGCCCCTGCGGGAGCC
ILNT1_0089_F09.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGTCTGACGCTGCCCCTGCGGGAGCC
PBL01_0048_F01.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGCCTGACGCTGCCCCTGCGGGAGCC
PBL01_0085_A01.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGCCTGACGCTGCCCCTGCGGGAGCC
MLN01_0100_A06.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGTCTGACGCTGCCCCTGCGGGAGCC
PBL01_0091_B12.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGTCTGACGCTGCCCCTGCGGGAGCC
PBL01_0101_H06.b : TTGCACGGTCATGGTGTGGGAGATCCCTGACGGGGGCCTGACGCTGCCCCTGCGGGAGCC


20110601C-012149 : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
                   ---------+---------+---------+---------+---------+---------+ 576
THY01_0205_A05.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
ILNT1_0089_F09.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
PBL01_0048_F01.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
PBL01_0085_A01.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
MLN01_0100_A06.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
PBL01_0091_B12.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC
PBL01_0101_H06.b : TGTCGTCACCCTGGAGGGCCACACCAAGCGCGTGGGCATCGTGGCCTGGCACCCCACGGC


20110601C-012149 : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
                   ---------+---------+---------+---------+---------+---------+ 636
THY01_0205_A05.b : CCAGAACGAGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
ILNT1_0089_F09.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
PBL01_0048_F01.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
PBL01_0085_A01.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
MLN01_0100_A06.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
PBL01_0091_B12.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC
PBL01_0101_H06.b : CCAGAACGTGCTGCTCAGTGCAGGTTGTGACAACGTGATCCTGGTGTGGGACGTGGGCAC


20110601C-012149 : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
                   ---------+---------+---------+---------+---------+---------+ 696
THY01_0205_A05.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
ILNT1_0089_F09.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
PBL01_0048_F01.b : TGGGGCGGCCGTGCTGACGCCGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
PBL01_0085_A01.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
MLN01_0100_A06.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
PBL01_0091_B12.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA
PBL01_0101_H06.b : TGGGGCGGCCGTGCTGACGCTGGGCTCGGACGTGCACCCGGACACAATCTACAGCGTGGA


20110601C-012149 : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
                   ---------+---------+---------+---------+---------+---------+ 756
THY01_0205_A05.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
ILNT1_0089_F09.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCNGGACAAGCGAGTTCGCATCAT
PBL01_0048_F01.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
PBL01_0085_A01.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
MLN01_0100_A06.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
PBL01_0091_B12.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT
PBL01_0101_H06.b : CTGGAGCCGAGACGGCGCCCTCATCTGCACCTCCTGCCGGGACAAGCGAGTTCGCATCAT


20110601C-012149 : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
                   ---------+---------+---------+---------+---------+---------+ 816
THY01_0205_A05.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
ILNT1_0089_F09.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
PBL01_0048_F01.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
PBL01_0085_A01.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
MLN01_0100_A06.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
PBL01_0091_B12.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC
PBL01_0101_H06.b : TGAGCCCCGCAAAGGCACCATTGTAGCGGAGAAGGACCGTCCCCACGAGGGGACCCGGCC


20110601C-012149 : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCACCGGC*TTCAGCCGCATGA
                   ---------+---------+---------+---------+---------+---------+ 875
THY01_0205_A05.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCACCGGC*TTCAGCCGCATGA
ILNT1_0089_F09.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGAATCTGACCACCGGCTTTCACCGGCATAA
PBL01_0048_F01.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCCACGGC*TTCAGCCGCATGA
PBL01_0085_A01.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCACCGGC*TTCAGCCGCATGA
MLN01_0100_A06.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGAATCTGACCACCGGCTTTCA*CCGCATGA
PBL01_0091_B12.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCACCGGC*TTCAGCCGCATGA
PBL01_0101_H06.b : CGTGCGAGCTGTGTTTGTGTCCGATGGCAAGATCCTGACCACCGGC*TTCAGCCGCATGA


20110601C-012149 : GTGAGCGGCAGGTGGCGCTGTGGGACACGAAACACCTGGAGGAGCCGCTGTCCCTGGCAG
                   ---------+---------+---------+---------+---------+---------+ 935
THY01_0205_A05.b : GTGAGCGGCAGGTGCCGCTGTGGGACACGAAACACCTGGAGGAGCCGCTGTCCCTGCAGG
ILNT1_0089_F09.b : GTGAGCGGCAGGTGGCGCTGTGGGACACAAAACACCTGGAGGAGCCGCTGTTCCTGCAGG
PBL01_0048_F01.b : GTGAAGCGCANGTGGCGCTGTGGGACACGAAACACCTGGAGGAAGCGCTGTCCCTGCANG
PBL01_0085_A01.b : GTGAGCGGCAGGTGGCGCTGTGGGACACGAAACACCTGGAGGAGCCGCTGTCCCTTGCAG
MLN01_0100_A06.b : ATGAGCGGCAGGTGGCGCTGTGGGACACGAAACACCTGAAGGAGCCGCTGTCCCTGGCAG
PBL01_0091_B12.b : GTGAGCGGCAGGTGGCGCTGTGGGACACGAAACACCTGGAGGAAGCGCTGTCCCCTGCAG
PBL01_0101_H06.b : GTGAGCGGCAGGTGGCGCTGTGGGACACGAAACACCTGGAGGAGCCGCTGTCCCCTGCAG


20110601C-012149 : AGCTGGACACGAGCAGCGGCGTCCTGCTGCCCTTCTTTACCCCCGAACACAAAATTGTCT
                   ---------+---------+---------+---------+---------+---------+ 995
THY01_0205_A05.b : AGCTGGACACGAGCACCGGCGTCCTGCTGCCCTTCTTTGACCCCGACCCCACCTTTGTCT
ILNT1_0089_F09.b : AGCTGGAAACGAACAGCGCCGTCCTGCTGCCCTTCTTTGACCCCGAAACCAAATT*GTCT
PBL01_0048_F01.b : AGCT*GACACGAGCAGCGGCGTCCTGCTGCCCTTCTTGACCCGACACNACATTGTCTACT
PBL01_0085_A01.b : AGCTGGACACGAGCAGCGGCGTCCTGCTGCCCTTTTTGACCCC**GACACAACATTGTCT
MLN01_0100_A06.b : AACTGGA*ACAAACAACGGCGTCCTGCTGCCCTTCTTTGACCCCGGAAACAAAATTTGGC
PBL01_0091_B12.b : AGCTGGACACGAGCAGCAGCGTCCTGCTGCCCTTTCTTTGACCCGA*CACAACATTGTCT
PBL01_0101_H06.b : AGCTGGACACGAGCAGCGGCGTCCTGCTGCCCTTCTTTTGACCCCGACACACATTTGTCT


20110601C-012149 : ACCTCTGTGGCAAGGGTGACAGCTCTATCCGGTACTTCGAGATCACTTCCAAAGCCCCGT
                   ---------+---------+---------+---------+---------+---------+ 1055
THY01_0205_A05.b : ACCTCTGgtggcaagggtgacagcttctatccggtaccttcaaaatcccttcccaaaggc
ILNT1_0089_F09.b : ACCTCTGTTGGGAAGGTGAAACCTCTATCCGGTACTccagatcacttcgaagccccttcc
PBL01_0048_F01.b : CTGTGGCAagggtgacactctatccgtactcnagatcacttcgaagccccgtctgcatac
PBL01_0085_A01.b : ACCTCTGTGGC*AGGGTGACAGCTCTATCCCGTACTTCNAGATCACTTCGAAGCCCC**T
MLN01_0100_A06.b : ACCTCTGTGGCAAGGGGGAAAGCTCTATTCGGTACATCGAAAATACTTCCAAGGCCCggt
PBL01_0091_B12.b : ACCTCTGTGGCAAGGGTGACAGCTCTATCCGGTACTTCGAGATCACTTNCGAAGCCCCGT
PBL01_0101_H06.b : AC*TCTGTGGCAAGGGTGACAGCTCTATCCGGTACTTCGAGATCACTTCCGAAGCCCCGN


20110601C-012149 : TCCTGCACTATCTGTCTATGTTCAGTTCCCAGGAGTCTCAGCGTGGCATGGGCTACATGC
                   ---------+---------+---------+---------+---------+---------+ 1115
THY01_0205_A05.b : cccgtttcctgcccttttcttgtcccttgtttcattttccaagggaatttctccaccgtg
ILNT1_0089_F09.b : cgcccaatcggtccagttcatttcaaagattctaacgtggcatggcctaaatcccaagct
PBL01_0048_F01.b : tgtcatgtcagttcaaagatctcacgtgcatggctactgccaccgtgtctgnagtgaaca
PBL01_0085_A01.b : TCCTGCACTATCTGTCatgttcattccnnagagtctcacgtggcatggctacatgccaac
MLN01_0100_A06.b : cccggaaaatcggtccagtttcagttccaggaatctcaaccgggcaggggctaaatgcca
PBL01_0091_B12.b : TCCTGCACTATCTGTCTATGTTCA*TTCCCAAGAGTCTCAGCGTGGCATGGGCTACtgcc
PBL01_0101_H06.b : TNCTGCACTATCTGTCCATGTTCAGTTCCAAGGAGTCTCANCGTGGCATGGGCTACATGC


20110601C-012149 : CCAAGCGTGGTCTGGAGGTGAACAA...................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b : ggcatggggcccttaaattgcccccaaac                              
ILNT1_0089_F09.b : ggttggaaggaacaagtggagaattccggttttaaacctcccaacgaagtgtaacccttt
PBL01_0048_F01.b : agtgaattgcagtcaaactgcccaacgagtggacccttgctgagggccagattcgacgtt
PBL01_0085_A01.b : gtggtctggagtgaacattgtaaattgccagttctcagctgcacggcggaggtgtaccca
MLN01_0100_A06.b : aggcgggtctggaagggaaacagtgtgaaattgccaggttcttaaagcctgccaaaaggg
PBL01_0091_B12.b : ccaacctggtctggagtgaaccattgtgaaatgccaggtctaatacctgcacaaccggag
PBL01_0101_H06.b : CCAAGCGTGGTCTGGAGGTGAACAAtgtggaattgccagtttctacaactgcacgaacgg


20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b :                                                             
ILNT1_0089_F09.b : ccctaaggtccataaaatcaaccttttcgaagaatttacccccccccgggaattaatttc
PBL01_0048_F01.b : cagagacgtacccccccggactattctccccaaaaaggtggggcgaacccccccctttcc
PBL01_0085_A01.b : tggctgacgggctaggagtcggacgttccggaagactgacccccccccggactaatctcc
MLN01_0100_A06.b : agggttgaaccctttccatgacggggtccaagaaatcgaaacgtttccaaaga      
PBL01_0091_B12.b : tgtgacccatggcatgacggtcctaagaatctgaccgtttccgaagactgtaccccccac
PBL01_0101_H06.b : aggtttgaaccattgtcctgacggtgctaagaattccgactgtttccagaagacttgacc


20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b :                                                             
ILNT1_0089_F09.b : ccttcgacaaaaatgtgtgggggggaaacccggcctccttttttctcaggagtgtttcct
PBL01_0048_F01.b : cagggtttccccaaaggaaaggtcggctaaggcagaaaacaacgggccctcgatcccggg
PBL01_0085_A01.b : ctcagccaaaatgctggggccggaaccggcccccaattccctggagtttgtcccaaacgg
MLN01_0100_A06.b :                                                             
PBL01_0091_B12.b : cccggacttaacttcctctagcaaaaattctgggggcggaaaccgggcctcctattccaa
PBL01_0101_H06.b : cccccacgcggaactaaatctcctcacgccaaaaaagattggggggccggaccccggccc


20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b :                                                             
ILNT1_0089_F09.b : caaaaaccgggataagtgaaaggggcagacatggttcaaaagaaacaaaagaattgttt
PBL01_0048_F01.b : gaaaaacccgggaaaatgtttgaacaaaaaaggcccctccccccggaaaaattaaaaann
PBL01_0085_A01.b : gataagttacggcctaaatggccaagaaacaaacagggtcccctgattttt        
MLN01_0100_A06.b :                                                             
PBL01_0091_B12.b : gaaaggt                                                    
PBL01_0101_H06.b : ctcctctttccccggaaggattgtgccccaaaaacggaataaagtaaccgggccgcacct


20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b :                                                             
ILNT1_0089_F09.b :                                                             
PBL01_0048_F01.b : nnnnnnncccctaaaacgcgattacaaatattccnnnnnnccctcgnnnnnnnnnnnng
PBL01_0085_A01.b :                                                             
MLN01_0100_A06.b :                                                             
PBL01_0091_B12.b :                                                             
PBL01_0101_H06.b : ggccaagagaaacaaagagaaggggttctccgtgatattcccccggggaaagaaaaaatc


20110601C-012149 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1140
THY01_0205_A05.b :                                                             
ILNT1_0089_F09.b :                                                             
PBL01_0048_F01.b :                                                             
PBL01_0085_A01.b :                                                             
MLN01_0100_A06.b :                                                             
PBL01_0091_B12.b :                                                             
PBL01_0101_H06.b : ccccggtgggaaaaaaatgtttttggagaatcacaaaaaacacg