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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-012160

Length: 974

Sequence [FASTA format sequence]
CGCCGCCGCC GCCGCACCAT GTCCTGCCTC TCCTCCCGCC TTGGCGCCCC CTTCGGGGTC
CGATCCTTCA GCTGCGCCTC AGCCTGCGGG CCCCGGCCCG GCCGCTGCTG CATCTCGGCC
GCCCCCTACC GGGGCATCTC CTGCTACCGC GGCCTCACCG GGGGCTTTAG CAGCCGCAGC
GTCGGCGGAG GCTTCCGCGC TGGCTCCTAT GGCCGCAGCT TCGGGTACCG CTCTGGCGGC
GTGGTCCGTC CCAGCCCGCC CTGCATCACC ACCGTGTCCA TCAACGAGTG CCTCCTCACG
CCCCTCAACC TGGAGATCGA CCCCAACGCC CAGTGTGTGA AGCAAGAGGA GAAGGAGCAG
ATCAAGTTTC TCAACAACAG GTTCGCCGCC TTCATTGACA AGGTGCGCTT CCTGGAGCAG
CAGAACAAGC TGCTGGAGAC CAAGCTGCAG TTCTACCAGA ACCGCCAGTG CTGCGAGAGC
AACCTGGAGC CGCTCTTCAA TGGCTACATC GAGACGCTGA GGCGGGAGGC CGAGCTCGTG
GAGGCCGACA GCGGGAGGCT GGCCTCCGAG CTCAACCACG TGCAGGAGGT GCTGGAGGGC
TACAAGAAGA AGTATGAAGA GGAGGTGGCA CTAAGGGCCA CCGCCGAGAA TGAATTTGTG
GCTCTGAAGA AGGATGTGGA CTGCGCCTAC GTGCAGAAAT CAGACCTGGA GGCCAACGTG
GAGGCCCTGA CCCAGGAGAT CGACTTCCTG CGGCGACTGT ATGAGGAGGA GCTCCGAGTC
CTCCACGCTC ACATCTCAGA CACCTCCGTC ATCGTCAAGA TGGACAACAG CCGGGACCTG
GACATGAACA ACATTGTCGC CGAGGACCAA GCTCAGTACG ATGACATCGC TAGCCGCAGC
CGGGCCGAGG CTGAGTCCTG GTACCGCAGC AATGGTGAAG AGATCAGGGC CAGNTGGTCC
GGCACGNAGA GACC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKRT81keratin, type II cuticular Hb1 [Homo sapiens]. 452e-127O
Contig/Assembly ProteinKRT83keratin, type II cuticular Hb3 [Homo sapiens]. 451e-127O
Contig/Assembly ProteinKRT86keratin, type II cuticular Hb6 [Homo sapiens]. 449e-126O
Contig/Assembly ProteinKRT85keratin, type II cuticular Hb5 [Homo sapiens]. 425e-119O
Contig/Assembly ProteinKRT84keratin, type II cuticular Hb4 [Homo sapiens]. 3062e-83
Contig/Assembly ProteinKRT82keratin, type II cuticular Hb2 [Homo sapiens]. 2902e-78
Contig/Assembly ProteinKRT5keratin, type II cytoskeletal 5 [Homo sapiens]. 2492e-66
Contig/Assembly ProteinKRT6Akeratin, type II cytoskeletal 6A [Homo sapiens]. 2471e-65
Contig/Assembly ProteinKRT75keratin, type II cytoskeletal 75 [Homo sapiens]. 2463e-65
Contig/Assembly ProteinKRT6Ckeratin, type II cytoskeletal 6C [Homo sapiens]. 2455e-65


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKrt83keratin, type II cuticular Hb3 [Mus musculus]. 459e-129O
Contig/Assembly Protein5430421N21Riktype II hair keratin [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 4 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 2 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 3 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 4 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 2 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 1 [Mus musculus]. 442e-124O
Contig/Assembly Protein5430421N21RikPREDICTED: keratin, type II cuticular Hb6 isoform 3 [Mus musculus]. 442e-124O
Contig/Assembly ProteinKrt86keratin, type II cuticular Hb6 [Mus musculus]. 441e-124O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486529PREDICTED: similar to keratin, hair, basic, 3 [Canis familiaris]. 461e-130
Contig/Assembly ProteinLOC486531PREDICTED: similar to type II keratin Kb21 isoform 1 [Canis familiaris]. 455e-128O
Contig/Assembly ProteinLOC486530PREDICTED: similar to type II keratin Kb26 [Canis familiaris]. 451e-127O
Contig/Assembly ProteinLOC486527PREDICTED: similar to keratin, hair, basic, 5 [Canis familiaris]. 429e-120O
Contig/Assembly ProteinLOC486531PREDICTED: similar to type II keratin Kb21 isoform 3 [Canis familiaris]. 400e-112O
Contig/Assembly ProteinLOC486528PREDICTED: similar to keratin, hair, basic, 5 [Canis familiaris]. 378e-105O
Contig/Assembly ProteinLOC486526PREDICTED: similar to Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) isoform 1 [Canis familiaris]. 3056e-83
Contig/Assembly ProteinLOC486526PREDICTED: similar to Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4) isoform 2 [Canis familiaris]. 3032e-82
Contig/Assembly ProteinLOC486525PREDICTED: similar to keratin complex 2, basic, gene 20 [Canis familiaris]. 2884e-78O
Contig/Assembly ProteinLOC486524PREDICTED: similar to cytokeratin type II [Canis familiaris]. 2541e-67


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinKRT83keratin, type II cuticular Hb3 [Bos taurus]. 462e-130O
Contig/Assembly ProteinKRT81keratin, type II cuticular Hb1 [Bos taurus]. 457e-129O
Contig/Assembly ProteinKRT86PREDICTED: keratin 86 [Bos taurus]. 451e-127O
Contig/Assembly ProteinKRT86keratin, type II cuticular Hb6 [Bos taurus]. 451e-127O
Contig/Assembly ProteinKRT85keratin, type II cuticular Hb5 [Bos taurus]. 416e-116O
Contig/Assembly ProteinLOC530179PREDICTED: intermediate filament type II keratin-like [Bos taurus]. 394e-110
Contig/Assembly ProteinLOC787600PREDICTED: intermediate filament type II keratin-like [Bos taurus]. 394e-110
Contig/Assembly ProteinLOC787600PREDICTED: intermediate filament type II keratin-like [Bos taurus]. 385e-107
Contig/Assembly ProteinKRT85keratin 85 [Bos taurus]. 363e-101
Contig/Assembly ProteinKRT84keratin, type II cuticular Hb4 [Bos taurus]. 3061e-83


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100523670PREDICTED: keratin, type II cuticular Hb3-like [Sus scrofa]. 480e-136O
Contig/Assembly ProteinLOC100523123PREDICTED: keratin, type II cuticular Hb1-like isoform 1 [Sus scrofa]. 478e-135O
Contig/Assembly ProteinLOC100523123PREDICTED: keratin, type II cuticular Hb1-like isoform 4 [Sus scrofa]. 473e-134O
Contig/Assembly ProteinLOC100621844PREDICTED: keratin, type II microfibrillar, component 7C-like, partial [Sus scrofa]. 463e-131O
Contig/Assembly ProteinKRT85PREDICTED: keratin, type II cuticular Hb5 [Sus scrofa]. 431e-121O
Contig/Assembly ProteinLOC100621639PREDICTED: keratin, type II microfibrillar, component 7C-like [Sus scrofa]. 412e-115O
Contig/Assembly ProteinLOC100525573PREDICTED: keratin, type II cuticular Hb5-like [Sus scrofa]. 3409e-94
Contig/Assembly ProteinKRT82PREDICTED: keratin, type II cuticular Hb2 [Sus scrofa]. 2908e-79O
Contig/Assembly ProteinKRT5PREDICTED: keratin, type II cytoskeletal 5 [Sus scrofa]. 2507e-67
Contig/Assembly ProteinLOC100621351PREDICTED: keratin, type II cytoskeletal 75-like [Sus scrofa]. 2492e-66


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
SKNB10002C05SKNB1_0002_C05.bDB800157 
SKNB10004F07SKNB1_0004_F07.bDB800313 AK349601
SKNB10012H02SKNB1_0012_H02.bDB800680 
SKNB10085G12SKNB1_0085_G12.bDB805204 
SKNB10094B12SKNB1_0094_B12.bDB805638 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
208G200.400WNGAT/D
T300.600TAT/Y
209A300.600WNTAT/Y
G200.400TGT/C


Alignment:      TOP

20110601C-012160 : .........................................CGCCGCCGCCGCCGCACCA
---------+---------+---------+---------+---------+---------+ 19
SKNB1_0004_F07.b : nnncccacagttgctcggcacccctgctgCGCCGCCGCCGCCGCA*CA
SKNB1_0012_H02.b : ngggcttnnnnnaaactgacgtgtgcanggagcgcctgctgCGCCGCCGCCGCCGCACCA
SKNB1_0002_C05.b : nnttccacagttgctacggagcgcctgctgccgccgccgccgccgcacca
SKNB1_0094_B12.b : ncccctggctgtggctatggaccgcctgctgccgccgccgccgccgcaca
SKNB1_0085_G12.b : nttttcaacggtggcactggagcgccgctgcgccgccgccgccgcacca
20110601C-012160 : TGTCCTGCCTCTCCTCCCGCCTTGGCGCCCCCTTCGGGGTCCGATCCTTCAGCTGCGCCT
---------+---------+---------+---------+---------+---------+ 79
SKNB1_0004_F07.b : TGTCCTGCCTCTCCTCCCGCCTTGGCGCCCCCTTCGGGGTCCGATCCTTCAGCTGCGCCT
SKNB1_0012_H02.b : TGTCCTGCCTCTCCTCCCGCCTTGGCGCCCCCTTCGGGGTCCGATCCTTCAGCTGCGCCT
SKNB1_0002_C05.b : tgtcctgcctctcctcccgccttggcgcccccttcggggtccgatCCTTCAGCTGCGCCT
SKNB1_0094_B12.b : tgtcctgcctctcctcccgccttggcgcccccttcggggtccgatCCTTCAGCTGCGCCT
SKNB1_0085_G12.b : tgtcctgcctctcctcccgccttggcgcccccttcggggtccgatCCTTCAGCTGCGCCT
20110601C-012160 : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
---------+---------+---------+---------+---------+---------+ 139
SKNB1_0004_F07.b : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
SKNB1_0012_H02.b : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
SKNB1_0002_C05.b : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
SKNB1_0094_B12.b : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
SKNB1_0085_G12.b : CAGCCTGCGGGCCCCGGCCCGGCCGCTGCTGCATCTCGGCCGCCCCCTACCGGGGCATCT
20110601C-012160 : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
---------+---------+---------+---------+---------+---------+ 199
SKNB1_0004_F07.b : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
SKNB1_0012_H02.b : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
SKNB1_0002_C05.b : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
SKNB1_0094_B12.b : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
SKNB1_0085_G12.b : CCTGCTACCGCGGCCTCACCGGGGGCTTTAGCAGCCGCAGCGTCGGCGGAGGCTTCCGCG
20110601C-012160 : CTGGCTCCTATGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
---------+---------+---------+---------+---------+---------+ 259
SKNB1_0004_F07.b : CTGGCTCCGGTGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
SKNB1_0012_H02.b : CTGGCTCCTATGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
SKNB1_0002_C05.b : CTGGCTCCGGTGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
SKNB1_0094_B12.b : CTGGCTCCTATGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
SKNB1_0085_G12.b : CTGGCTCCTATGGCCGCAGCTTCGGGTACCGCTCTGGCGGCGTGGTCCGTCCCAGCCCGC
20110601C-012160 : CCTGCATCACCACCGTGTCCATCAACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
---------+---------+---------+---------+---------+---------+ 319
SKNB1_0004_F07.b : CCTGCATCACCACCGTGTCCATCAACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
SKNB1_0012_H02.b : CCTGCATCACCACCGTGTCCATCAACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
SKNB1_0002_C05.b : CCTGCATCACCACCGTGTCCATCAACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
SKNB1_0094_B12.b : CCTGCATCACCACCGTGTCCATCAACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
SKNB1_0085_G12.b : CCTGCATCACCACCGTGTCCATCGACGAGTGCCTCCTCACGCCCCTCAACCTGGAGATCG
20110601C-012160 : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATCAAGTTTCTCAACAACA
---------+---------+---------+---------+---------+---------+ 379
SKNB1_0004_F07.b : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATTAAGTTTCTCAACAACA
SKNB1_0012_H02.b : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATCAAGTTTCTCAACAACA
SKNB1_0002_C05.b : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATTAAGTTTCTCAACAACA
SKNB1_0094_B12.b : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATCAAGTTTCTCAACAACA
SKNB1_0085_G12.b : ACCCCAACGCCCAGTGTGTGAAGCAAGAGGAGAAGGAGCAGATCAAGTTTCTCAACAACA
20110601C-012160 : GGTTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGG*AGCAGCAGAACAAGCTGCTGGAG
---------+---------+---------+---------+---------+---------+ 438
SKNB1_0004_F07.b : GGTTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGCCACCACCAGAACAAGCTGCTGGAG
SKNB1_0012_H02.b : GGCTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGG*AGCAGCAGAACAAGCTGCTGGAG
SKNB1_0002_C05.b : GGTTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGC*CGCACCANAACAAGCTGCTGGAG
SKNB1_0094_B12.b : GGTTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGG*AGCAGCAGAACAAGCTGCTGGAG
SKNB1_0085_G12.b : GGTTCGCCGCCTTCATTGACAAGGTGCGCTTCCTGG*AGCAGCAGAACAAGCTGCTGGAG
20110601C-012160 : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGCAACCTGGAGCCGCTCTTC
---------+---------+---------+---------+---------+---------+ 498
SKNB1_0004_F07.b : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGCAACCTGGAGCCGCTCTTC
SKNB1_0012_H02.b : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGCAACCTGGAGCCGCTCTTC
SKNB1_0002_C05.b : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGCAACCTGGAGCCGCTCTTC
SKNB1_0094_B12.b : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGTAACCTGGAGCCGCTCTTC
SKNB1_0085_G12.b : ACCAAGCTGCAGTTCTACCAGAACCGCCAGTGCTGCGAGAGCAACCTGGAGCCGCTCTTC
20110601C-012160 : AATGGCTACATCGAGACGCTGAGGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
---------+---------+---------+---------+---------+---------+ 558
SKNB1_0004_F07.b : AATGGCTACATCGAGACGCTGAGGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
SKNB1_0012_H02.b : AATGGCTACATCGAGACGCTGAGGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
SKNB1_0002_C05.b : AATGGCTACATCGAGACGCTGAAGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
SKNB1_0094_B12.b : AATGGCTACATCGAGACGCTGAGGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
SKNB1_0085_G12.b : AATGGCTACATCGAGACGCTGAGGCGGGAGGCCGAGCTCGTGGAGGCCGACAGCGGGAGG
20110601C-012160 : CTGGCCTCCGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTATGAA
---------+---------+---------+---------+---------+---------+ 618
SKNB1_0004_F07.b : CTGGGCTCCGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTANCAGAAGAAGTATGAA
SKNB1_0012_H02.b : CTGGCCTCCGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTATGAA
SKNB1_0002_C05.b : CTGGCCTCCGAGCTCA*CCACGTGCAGGAGGTGCTGGAAGGCTACAAGAAGAA*TATGAA
SKNB1_0094_B12.b : CTGGCCTCCGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTATGAA
SKNB1_0085_G12.b : CTGGCCTCCGAGCTCAACCACGTGCAGGAGGTGCTGGAGGGCTACAAGAAGAAGTATGAA
20110601C-012160 : G*AGGAGGTGGCACTAAGGGCCACCGCCGAGAATGAATTTGTGGCTCTGAAGAAGGATGT
---------+---------+---------+---------+---------+---------+ 677
SKNB1_0004_F07.b : G*AGGAGGTGGCACTGAGGGCAACCGCCGAGAATGAATTTGTGGCTCTGAAAAAGGATGT
SKNB1_0012_H02.b : G*AGGAGGTGGCACTAAGGGCCACCGCCGAGAATGAATTTGTGGCTCTGAAGAAGGATGT
SKNB1_0002_C05.b : A*AGGAGGTGGCACTGAGGGCCCACCCCGAGAATGAATTTGTGGCTCCTAAAAAAGATGT
SKNB1_0094_B12.b : G*AGGAGGTGGCACTAAGGGCCACCGCCGAGAATGAATTTGTGGCTCTGAAGAAGGATGT
SKNB1_0085_G12.b : GGAGGAGGTGGCACTAAGGGCCACCGCCGAGAATGAATTTGTGGCTCTGAAGAAGGATGT
20110601C-012160 : GGACTGCGCCTACGTGCAGAAATCAGACCTGGAGGCCAACGTGGAGGCCCTG*ACCCAGG
---------+---------+---------+---------+---------+---------+ 736
SKNB1_0004_F07.b : GGACTGCGCCTACGTGCAGAAATCAAACCTGGAGGCCAACGTGGAGGCCCTGGACCCAGA
SKNB1_0012_H02.b : GGACTGCGCCTACGTGCAGAAATCAGACCTGGAGGCCAACGTGGAGGCCCTG*ACCCAGG
SKNB1_0002_C05.b : GGACTGCGCCTACGTGCAAAAATCAAACCCGGAGGCCAACGTGGAGGGCCCTGacccaag
SKNB1_0094_B12.b : GGACTGCGCCTACGTGCAGAAATCAGACCTGGAGGCCAACGTGGAGGCCCTGACCCCAGG
SKNB1_0085_G12.b : GGACTGCGCCTACGTGCAGAAATCAGACCTGGAGGCCAACGTGGAGGCCCTG*ACCCAGG
20110601C-012160 : AGATCGACTTCCTGCGGCGACTGTATGAGGAGGAGCTCCGAGTCCTCCACGCTCACATCT
---------+---------+---------+---------+---------+---------+ 796
SKNB1_0004_F07.b : AAATCGACTTCCTGCGGCGAATGTATGAGGAGAAGCTCCAAGTCCTTCCAGGCTACATCT
SKNB1_0012_H02.b : AGATCGACTTCCTGCGGCGACTGTATGAAGAGGAGCTCCGAGTCCTCCACGCTCACATCT
SKNB1_0002_C05.b : aaatcaacttcctgcggcgactggataaggaggaacttccaagccctccaggcttcaatt
SKNB1_0094_B12.b : AGATCGACTTCCTGCGGCGACTGTATGAGGAGGAGCTCCCAGTCCTCCACGCTCACATCT
SKNB1_0085_G12.b : AGATCGACTTCCTGCGGCGACTGTATGAGGAGGAGCTCCGAGTCCTCCACGCTCACATCT
20110601C-012160 : CAGACACCTCCGTCATCGTCAAGATGGACAACAGCCGGGACCTGGACATGAACAACATT*
---------+---------+---------+---------+---------+---------+ 855
SKNB1_0004_F07.b : CAGAAACCTCCGTCATCGTtaagaagggacaacagccgggaaccggaacataaaaaaatt
SKNB1_0012_H02.b : CAGACACCTCCGTCATCGTCAAGATGGACAACAGCCGGGACCTGGACATGAACAACATT*
SKNB1_0002_C05.b : tcaaaaaacctccgttatcgttaaaaagaacaacagccgggaacctggaaatgaaacaaa
SKNB1_0094_B12.b : CAGACACCTCCGTCATCGTCAAGATGGACCAAACCCGGAACCTGGACATGAACAACATtg
SKNB1_0085_G12.b : CAGACACCTCCGTCATCGTCAAGATGGACAACAGCCGGGACCTGGACATGAACAACATTN
20110601C-012160 : GTCGCCGAGGACCAAGCTCAGTACGATGACATCGCTAGCCGCAGCCGGGCCGAGGCTGAG
---------+---------+---------+---------+---------+---------+ 915
SKNB1_0004_F07.b : tgcccccaaaaaaaaggttccataagaaagaaattccccgccccaaaccgggccaaagtt
SKNB1_0012_H02.b : GTCGCCGAGATCCAAGCTCAGTACGATGACATCGCTAGCCGCAGCCGGGCCGAAGCTGAG
SKNB1_0002_C05.b : attggtccccaaaatcaaggttcataaggagaaaatcccccacccgcaacccgggccgaa
SKNB1_0094_B12.b : tccccccagatccaagcctcgtacgatgacctcgctaaccccaacccgggcccaggcctt
SKNB1_0085_G12.b : GTCGCCGAAGATCAGGCTCAGTACGATGACATCGCTAGCCGCAGCCGGGCCGAGGCTGAA
20110601C-012160 : TCCTGGTACCGCAGCAATGGTGAAGAGATCAGGGCCAGNTGGTCCGGCACGNAGAGACC.
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b : gaaaccctggtaaccccaccaaggtgggagggaaaatcaggcccccgggggtccggccac
SKNB1_0012_H02.b : TCCTGGTACCGCANCAAGTGTGAAGAGATCAGGCCACGNTGGTCCGGCACGNAGAGACCt
SKNB1_0002_C05.b : ggtgtaaatccgggtaaccccacaaaggggggagggaaaacaagggccacggggggtccc
SKNB1_0094_B12.b : aatcctggtaccccaacaagtgtgaagaaaatcaagggccacgttggttccggccccaaa
SKNB1_0085_G12.b : GTCTGGTACCGCAGCAGTGGTGAGGAGATCAGGGCCAacggtgggtccggcaccgaagac
20110601C-012160 : ............................................................
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b : gaaaaaaacccctggcgcgcccccagggggggaaaatcaaggggctgaaaacccccgaga
SKNB1_0012_H02.b : gcgccgcaccagggagagatcatgagctgaaccgcagatccaaaggctgacggccgaa
SKNB1_0002_C05.b : ggccgggaaaaaaccctgcgcccccccccgggggggaaataaatgggcttggaaccccgt
SKNB1_0094_B12.b : aaaaccctctcctcccccaggaagatatccttgacctgaaccccagaatctaaagcccta
SKNB1_0085_G12.b : cctgcgccgcacccagggaggagaatcatgaactggcccgccagattccaaagttgacgg
20110601C-012160 : ............................................................
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b : tccaaaggggggaaggccgaaaatttaaaaaggccaaggggccaaaaattccaaaactgg
SKNB1_0012_H02.b :
SKNB1_0002_C05.b : gattccaaagggttaaagggcccagaattaaaaaaggcccaaggggccaaaaacccccac
SKNB1_0094_B12.b : acgcccaaaatcaaaaaagccccatgcccaaaaccccccctcgaaagcttcctggcccga
SKNB1_0085_G12.b : gcaagaattaaaaagcccaatggccaaaacccaactggaggccgccccgggtgagactaa
20110601C-012160 : ............................................................
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b : gagaggttcccgggggtttaaaacataaaaaacaggggccccgggtgggcccccaaaaaa
SKNB1_0012_H02.b :
SKNB1_0002_C05.b : acggggagggttccctggggtataaaaaaaaaaaaaaggggcgcgagggggccctccaca
SKNB1_0094_B12.b : aactttaaccacccgccccagggggccccccacaaatccacttgcaaccctcttcaaagt
SKNB1_0085_G12.b : aacaaaaggccagggggccccccacaaatccaaagggaaaagggttgaaag
20110601C-012160 : ............................................................
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b : aa
SKNB1_0012_H02.b :
SKNB1_0002_C05.b : aaatacccagttaaaaatcggtgtaaaagcggaagggcgcccccgtgaaaaaggacaaaa
SKNB1_0094_B12.b : caacaccctcccccccaaaaagcactacccaacactct
SKNB1_0085_G12.b :
20110601C-012160 : ............................................................
---------+---------+---------+---------+---------+---------+ 974
SKNB1_0004_F07.b :
SKNB1_0012_H02.b :
SKNB1_0002_C05.b : ca
SKNB1_0094_B12.b :
SKNB1_0085_G12.b :