[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-012520
Length:
566
Sequence:
[FASTA format sequence]
ATTCTTGCCA AAGACTCCAG CAGCAGCATG AAGTTGGGAG GCTTCCTCCT CCTTGTGGCC
CTGCTCATGC TCAGCTCAGA GGTACAGGAG CTGCAGGCTG CAGTGAGACC TGTGAAATTT
CCAGTTGAAC AGAGACCCGG AAAATGTCCA GTGTTGCCAA AAGGAACGAT TGGACTTTGT
GCTGAATTTT GCTTCGGGGA TGACTCCTGT CCCAGCGGAC AGAAGTGCTG CAGCAATGGT
TGTGGACACT CTTGCCAGAC TGCTGTTCCA GACGAGAAAA CCTTCCCTAG CCGTTTGGAT
GACTGATGAA CCTTGGCCTC CTTCCATAAT TGTTCCCACA TGTCACCTTT ATTTGAAGAG
CTGGGCTTTT CCAGGAACTC CACCTTTGCC AGGAACCCCA GGATCATGGG GTGAGGTTCT
AGAATAACTT GGCTTAAGGG TTGAATTCTG GCAATTGTTT AAGGAATAGT GCTTGCAAAG
GATCCTTCTT CTGAATAAAA CGACTTCTCT GGCATTAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAA
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | WFDC3 | WAP four-disulfide core domain protein 3 precursor [Homo sapiens]. | 50.8 | 8e-07 | |
|
| KAL1 | anosmin-1 precursor [Homo sapiens]. | 50.4 | 1e-06 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Gm11428 | activated macrophage/microglia WAP domain protein precursor [Mus musculus]. | 63.5 | 1e-10 | O |
|
| LOC100504934 | PREDICTED: extracellular peptidase inhibitor-like [Mus musculus]. | 63.5 | 1e-10 | O |
|
| Expi | extracellular peptidase inhibitor precursor [Mus musculus]. | 63.2 | 1e-10 | O |
|
| Wfdc3 | WAP four-disulfide core domain 3 [Mus musculus]. | 56.2 | 2e-08 | O |
|
| 1100001G20Rik | WDNM1-like protein [Mus musculus]. | 50.1 | 1e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC610921 | PREDICTED: similar to Anosmin 1 precursor (Kallmann syndrome protein) (Adhesion molecule-like X-linked) [Canis familiaris]. | 52.8 | 2e-07 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100296618 | PREDICTED: extracellular peptidase inhibitor-like [Bos taurus]. | 83.2 | 1e-16 | O |
|
| LOC100296618 | PREDICTED: mCG55370-like [Bos taurus]. | 83.2 | 1e-16 | O |
|
| LOC515676 | PREDICTED: hypothetical protein [Bos taurus]. | 82 | 3e-16 | |
|
| LOC515676 | PREDICTED: hypothetical protein [Bos taurus]. | 82 | 3e-16 | |
|
| EXPI | extracellular peptidase inhibitor [Bos taurus]. | 79.3 | 2e-15 | O |
|
| WFDC3 | PREDICTED: WAP four-disulfide core domain 3 [Bos taurus]. | 54.3 | 7e-08 | |
|
| WFDC3 | PREDICTED: WAP four-disulfide core domain 3 [Bos taurus]. | 54.3 | 7e-08 | |
|
| KAL1 | Kallmann syndrome 1 protein [Bos taurus]. | 53.9 | 9e-08 |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| WFDC3 | PREDICTED: WAP four-disulfide core domain protein 3 isoform 1 [Sus scrofa]. | 54.3 | 4e-08 | O |
|
| KAL1 | PREDICTED: anosmin-1 [Sus scrofa]. | 51.6 | 3e-07 |
|
|
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20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0066_F01.b : ctaacataxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b :
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0066_F01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0101_G08.b : nnnnggctaaacaxxxxxxxxx
OVRM1_0080_D03.b :
BMWN1_0045_E04.b :
ILNT1_0021_H07.b :
20110601C-012520 : .................................ATTCTTGCCAAAGACTCCAGCAGCAGC
---------+---------+---------+---------+---------+---------+ 27
AMP01_0066_F01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTCTTGCCAAAGACTCCAGCAGCAGC
PBL01_0101_G08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCTTGCCAAAGACTCCAGCAGCAGC
OVRM1_0080_D03.b : cgttgacxxxx
BMWN1_0045_E04.b :
ILNT1_0021_H07.b :
20110601C-012520 : ATGAAGTTGGGAGGCTTCCTCCTCCTTGTGGCCCTGCTCATGCTCAGCTCAGAGGTACAG
---------+---------+---------+---------+---------+---------+ 87
AMP01_0066_F01.b : ATGAAGTTGGGAGGCTTCCTCCTCCTTGTGGCCCTGCTCATGCTCAGCTCAGAGGTACAG
PBL01_0101_G08.b : ATGAAGTTGGGAGGCTTCCTCCTCCTTGTGGCCCTGCTCATGCTCAGCTCAGAGGTACAG
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgatgctgcac
BMWN1_0045_E04.b : nnnggatggtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : GAGCTGCAGGCTGCAGTGAGACCTGTGAAATTTCCAGTTGAACAGAGACCCGGAAAATGT
---------+---------+---------+---------+---------+---------+ 147
AMP01_0066_F01.b : GAGCTGCAGGCTGCAGTGAGACCAGTGAAATTTCCAGTTGAACAGAGACCCGGAAAATGT
PBL01_0101_G08.b : GAGCTGCAGGCTGCAGTGAGACCTGTCAAATTTCCAGTTGAACAGAGACCCGGAAAATGT
OVRM1_0080_D03.b : ctgccggtcatcggtgcattttcccatggacgacacGTTGAACAGAGACCCGGAAAATGT
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxgctctttccctatctgtggGTTGAACAGAGACCCGGAAAATGT
ILNT1_0021_H07.b :
20110601C-012520 : CCAGTGTTGCCAAAAGGAACGATTGGACTTTGTGCTGAATTTTGCTTCGGGGATGACTCC
---------+---------+---------+---------+---------+---------+ 207
AMP01_0066_F01.b : CCAGTGTTGCCAAAAGGAACGATTGGACTTTGTGCTGAATTTTGCTTCGGGGATGACTCC
PBL01_0101_G08.b : CCAGTGTTGCCAAAAGGAACGATTGGACTTTGTGCTGAATTTTGCTCCGGGGATGACTCC
OVRM1_0080_D03.b : CCAGTGTTGCCAAAAGGAACGTATGGACTTTGTGCTGAATTTTGCTTCGGGGATGACTCC
BMWN1_0045_E04.b : CCAGTGTTGCCAAAAGGAACGTATGGACTTTGTGCTGAATTTTGCTTCGGGGATGACTCC
ILNT1_0021_H07.b :
20110601C-012520 : TGTCCCAGCGGACAGAAGTGCTGCAGCAATGGTTGTGGACACTCTTGCCAGACTGCTGTT
---------+---------+---------+---------+---------+---------+ 267
AMP01_0066_F01.b : TGTCCCAGCGGACAGAAGTGCTGCAGCAATGGTTGTGGACACTCTTGCCAGACTGCTGTT
PBL01_0101_G08.b : TGTCCCAGCGGACAGAAGTGCTGCAGCAATGGTTGTGGACACTCTTGCCAGACTGCTGTT
OVRM1_0080_D03.b : TGTCCCAGCGGACAGAAGTGCTGCAGCAATGGTTGTGGACACTCTTGCCAGACTGCTGTT
BMWN1_0045_E04.b : TGTCCCAGCGGACAGAAGTGCTGCAGCAATGGTTGTGGACACTCTTGCCAGACTGCTGTT
ILNT1_0021_H07.b :
20110601C-012520 : CCAGACGAGAAAACCTTCCCTAGCCGTTTGGATGACTGATGAACCTTGGCCTCCTTCCAT
---------+---------+---------+---------+---------+---------+ 327
AMP01_0066_F01.b : CCAGACGAGAAAACCTTCCCTAGCCGTTTGGATGACTGATGAACCTTGGCCTCCTTCCAT
PBL01_0101_G08.b : CCAGACGAGAAAACCTTCCCTAGCCGTTTGGATGACTGATGAACCTTGGCCTCCTTCCAT
OVRM1_0080_D03.b : CCAGACGAGAAAACCTTCCCTAGCCGTTTGGATGACTGATGAACCTTGGCCTCCTTCCAT
BMWN1_0045_E04.b : CCAGACGAGAAAACCTTCCCTAGCCGTTTGGATGACTGATGAACCTTGGCCTCCTTCCAT
ILNT1_0021_H07.b : ttttttgaagagagagg
20110601C-012520 : AATTGTTCCCACATGTCACCTTTATTTGAAGAGCTGGGCTTTTCCAGGAACTCCACCTTT
---------+---------+---------+---------+---------+---------+ 387
AMP01_0066_F01.b : AATTGTTCCCACATGTCACCTTTATTTGAAGAGCTGGGCTTTTCCAGGAACTCCACCTTT
PBL01_0101_G08.b : AATTGTTCCCACATGTCACCTTTATTTGAAGAGCTGGGCTTTTCCAGGAACTCCACCTTT
OVRM1_0080_D03.b : AATTGTTCCCACATGTCACCTTTATTTGAAGAGCTGGGCTTTTCCAGGAACTCCACCTTT
BMWN1_0045_E04.b : AATTGTTCCCACATGTCACCTTTATTTGAAGAGCTGGGCTTTTCCAGGAACTCCACCTTT
ILNT1_0021_H07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGAACTCCACCTTT
20110601C-012520 : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
---------+---------+---------+---------+---------+---------+ 447
AMP01_0066_F01.b : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
PBL01_0101_G08.b : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
OVRM1_0080_D03.b : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
BMWN1_0045_E04.b : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
ILNT1_0021_H07.b : GCCAGGAACCCCAGGATCATGGGGTGAGGTTCTAGAATAACTTGGCTTAAGGGTTGAATT
20110601C-012520 : CTGGCAATTGTTTAAGGAATAGTGCTTGCAAAGGATCCTTCTTCTGAATAAAACGACTTC
---------+---------+---------+---------+---------+---------+ 507
AMP01_0066_F01.b : CTGGCAATTGTTTAAGGAATAGTGCTTGCAAAGGATCCTTCTTCTGAATAAAACGACTTC
PBL01_0101_G08.b : CTGGCAATTGTTTAAGGAATAGTGCTTGCAAAGGATCCTTCTTCTGAATAAAACGACTTC
OVRM1_0080_D03.b : CTGGCAATTGTTTAAGGAATAGTGCTTGCAAAGGATCCTTCTTCTGAATAAAACGACTTC
BMWN1_0045_E04.b : CTAGCAATTGTTTAAGGAATAGTGCTTCCAAAGGATCCTTCTTCTGAATAAAACGACTTC
ILNT1_0021_H07.b : CTGGCAATTGTTTAAGGAATAGTGCTTGCAAAGGATCCTTCTTCTGAATAAAACGACTTC
20110601C-012520 : TCTGGCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : TCTGGCncnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b : TCTGGCATTAAGAAaa
OVRM1_0080_D03.b : TCTGGCATTAAAAAAAAAAAAAAAAAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : TCTGGCATTaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaax
ILNT1_0021_H07.b : TCTGGaaaaaaaaaaaaaaaaaaaaaaaa
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0045_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : xxxagaaaacggaccctctgccttagggctttcgttaccggtaaccggttcccccttccc
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : cagggcggataatcggctacccccggatttcgggggaaaccggggaaattacttgtaagc
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : aagcggcagcaaatgcccacaacggggcgggcgccgggggttgctttttgcaacggcccc
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : cccctcgacaacaaaaaaaaacccagtctattgcgaggttcccaacccccccccacaaaa
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : aaacctggcgtttccccttgaacctccgggggcccctcctgttcacactagcgctaagga
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : atcccgccccctctcccggggggcggggtctttcccagttagaatgagtttctatttgcg
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : gggaggaaagccagtggtggaggaccaaccccctttacgggcgccctctcgcgagtgtgg
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b :
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : tgaccaccagtaaaactctcccctacgttctttttaaaaaaaaaaataatgggccccatc
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b :
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : ttggggttaaacaaaaaaaaattaacctgtcccactcccaaaaaacctccccaccccggg
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b :
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : ggttttgttcctcacaagaattttctcccgcgacgtgggtgggagcnaaaaataaataaa
ILNT1_0021_H07.b :
20110601C-012520 : ............................................................
---------+---------+---------+---------+---------+---------+ 566
AMP01_0066_F01.b :
PBL01_0101_G08.b :
OVRM1_0080_D03.b :
BMWN1_0045_E04.b : aacgccctcccgcgcgcc
ILNT1_0021_H07.b :
TOP
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