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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013020

Length: 1,969

Sequence [FASTA format sequence]
GAAGCCTGGG TCCCCTCCCA GAGAAGTGGT CCCTCGGCCC CGCCCTGGTG TCACAGAAGC
TACTATTACT GGTCTGGAAC CAGCAACCGA GTACATAATC CAGGTCATTG CCCTCAAGAA
CAATCAGAAG AGTGAGCCTC TGATCGGGAG GAAAAGGACA GTTCAAAAGA CCCCTTTCGT
CACCAAACCC GGGTATGACA CTGGAAACGG TATTCAGCTT CCTGGCACTT CTGGTCAGCA
GCCCAGTCTT GGGCAACAAA TGATCTTTGA GGAGCATGGT TTTAGGAGAA CCACACCGCC
CACAACGGCC ACCCCCGTAA GGCATAGGCC AGGACCGTAT ACGCCGAATG TAAATGAGGA
GATCCAAGTT GGTCATGTCC CCAGGGGAGA CGTAGACCAC CACCTCTACC CTCACGTTCT
GGGACTCAAT CCAAATGCTT CTACAGGACA AGAAGCTCTC TCTCAGACAA CCATCTCATG
GACCCCATTC CAGGAAAGCT CTGAATATAT CATTTCATGT CATCCCGTGG GCATTGATGA
AGAACCCTTG CAGTTCCGAG TTCCTGGAAC TTCTGCTAGT GCCACCTTGA CGGGTCTCAC
CAGAGGTGCC ACCTACAACA TCATAGTGGA GGCACTAAAA GACCAGAAGA GGCACAAGAT
TCGGGAGGAG GTGGTTACTG TGGGCAATTC TGTTGACCAA GGCCTAAGCC AACCCACGGA
TGACTCGTGC TTCGACCCCT ACACGGTTTC CCATTATGCC ATCGGAGAAG AGTGGGAGCG
ATTATCTGAA TCTGGCTTTA AGCTCTCGTG CCAGTGCTTA GGCTTTGGCA GTGGTCATTT
CAGATGTGAT TCATCTAAAT GGTGCCATGA CAATGGTGTG AATTACAAGA TTGGAGAGAA
GTGGGATCGT CAGGGAGAGA ATGGCCAGAT GATGAGCTGC ACATGTCTCG GAAATGGAAA
AGGAGAATTC AAGTGTGATC CCCATGAAGC GACGTGTTAT GATGATGGGA AGACATACCA
TGTGGGAGAA CAGTGGCAGA AGGAATATCT CGGTGCCATT TGCTCCTGCA CATGCTTTGG
AGGCCAGCGG GGCTGGCGCT GTGACAACTG CCGCAGACCA GGGGCTGAAC TCGGTCCCGA
AGGCTCCACC GGGCACTCCT ACAACCAGTA TTCACAGAGA TACCATCAGA GAACAAACAC
CAATGTCAAC TGCCCAATTG AGTGCTTCAT GCCTTTAGAT GTACAGGCTG ACATAGAAGA
TTCCCGAGAG TAAAATTTCC AAGCTGGAGA AACAAGCACG GATCTCTGCC AAGGTCCATC
CAAACTGGAG TGATGTTAGC AGACCCCATC CCAGTTTGTT TCTTTCTTAA GCCCTTTGCT
CTGGAGTAAT TTCTTCAGCT TCAGCTCAAC TCACAGCTTC TCCAAGCATC ACCCTGGGAG
TGTTTTGAGA CTTTTCTCAT AAATGGCAGT ACATGGCCTG CTCTCCAAAG TGTTCAGTAC
CGCTCAATAT TTTAAATGAA ATGATTCTAA CTTGTGATCT GAATTGGGAT CAGTAGGGTT
GCACATGTAC CAACCAAGAT GCAAAATGTC TTGAAATGAT ATTACCAAAA ATTTTAAGTA
GGAAAGTTAC CCAAACACTT CTGCTTCCAC TTAACTGTCT GGCCCGCAAT ATTGTAGGAA
CAGCATATCC TTGTTACTGT GATATTTAAA ATATCCACAG TACTCACTTT TTCCAGATGA
CTTTGGTAAT TGCCTTAGAA TATCTTTCTC TTACCTGGTA TTTATCAATT TTTCCCAGTA
TTTTTATATG GAATCAAATT GTATTGAAGA CAGTTAGTAG GCAGTTGATA AGAGGAATTT
GTATAATTAT GGTTGGGGAT ATTTTTATAC TGTACGTGCC AAAGCTTTCT ACTGTGGAAG
ACACTGTTTA TAAAAGATTA CATCCACAAA AAAAAAAAAA AAAAAAAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFN1fibronectin isoform 1 preproprotein [Homo sapiens]. 7530.0
Contig/Assembly ProteinFN1fibronectin isoform 5 preproprotein [Homo sapiens]. 7530.0
Contig/Assembly ProteinFN1fibronectin isoform 4 preproprotein [Homo sapiens]. 6980.0
Contig/Assembly ProteinFN1fibronectin isoform 3 preproprotein [Homo sapiens]. 6840.0
Contig/Assembly ProteinFN1fibronectin isoform 6 preproprotein [Homo sapiens]. 582e-166
Contig/Assembly ProteinFN1fibronectin isoform 7 preproprotein [Homo sapiens]. 1143e-25O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFn1fibronectin precursor [Mus musculus]. 7380.0


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFN1PREDICTED: similar to fibronectin 1 isoform 1 preproprotein [Canis familiaris]. 7160.0


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFN1fibronectin [Bos taurus]. 7830.0


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFN1PREDICTED: fibronectin isoform 1 [Sus scrofa]. 8140.0
Contig/Assembly ProteinFN1PREDICTED: fibronectin isoform 2 [Sus scrofa]. 8140.0
Contig/Assembly ProteinFN1PREDICTED: fibronectin isoform 3 [Sus scrofa]. 612e-175


Assembly Members: 20      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.