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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013095

Length: 1,578

Sequence [FASTA format sequence]
GAGACGGACT GTGCCCGGGA GTCAGACAGC GTCTCAGGAG AGCTCGAGAC GCACCCCCAG
CCAGCCATGG CCCGGTTCTT TCGGGCATCC TGCCTTATCT CCCTGCTCCT GGCCGGCTTC
CTCCCGCCGA GCCGGGGACA GGAGAAGTCG AAGACGGACT GCTATCGTGG TGTGAGTGGC
ACCATCTATG AGTATGGAGC CCTCACCATC GACGGGGAGG AGTACATCCC TTTTAAGAAG
TACGCTGGCA AATACGTCCT CTTTGTCAAC GTGGCCAGCT ACTGAGGCCT GACGGGCCAG
TACGTTGAAC TGAATGCACT GCAGGAAGAG TTTGAACCCT TTGGCCTCGT CATTCTGGGC
TTCCCCTGCA ACCAATTTGG AAAACAGGAA CCGGGAGACA ACTCGGAGAT TCTGTCCACT
CTCAGGTATG TCCGACCAGG TGGGGGCTTC ATCCCCAATT TCCAGCTCTT TGAGAAAGGG
GACGTGAACG GGGAGAAGGA GCAGAAGTTC TACACGTTCC TGAAGAACGC CTGTCCTCCT
ACTTCGGAGC TCCTGGGCTC ACCGGGCCGC CTATTCTGGG AACCCATGAA GGTCCATGAC
ATCCGCTGGA ACTTTGAGAA GTTCCTGGTG GGGCCCGACG GTGTGCCCGT CATGCGCTGG
TACCACCGCA CCACCATCAA CACTGTCAAG CTGGACATCC TGGCCTACAT GCGGCGGCGG
GCAGCCCTGG AGGCCAAGCG GCAGTAATGG AGGCCCACCC CACCCTGTGC CCACCCCCCA
GGGGCTGGGG AGGACTCTGT TCAGGAAGGA ATCCATTTCT ACAACCACGC CGCTGTCCCC
TGCTAGACCC CTCACTAGGA CACAAGGGCC CAGCCCGACA GGAAGGTGTG CACACAACTG
TGTCTGTACT GCTGTGCTTG TGAGCGTGTG CATGCGTGCC TACAGGTGTG TGTGATCACA
GGAGTGCACT GCCACTTACA GGCGTGGCGA CCTGCAGGAA TCCCCAGGCC TGTAAGTGTG
CCCACAGCTG TGTGCCAGGG GTGGGGTGCC GGAGCGACAC TCCCCTCTCG CTCTGGTTCT
CTGCTCCAAT GATCACAACT CACTTTCAGT GAGCCCAAAG GAAAAAACCA GTTCTAGATT
CAGTTGGTCT GCTCTAACCT GGCCTTTAGC CCTTGGGGCC AGCATCTCCC ACTGCCTCCA
GACACCACCA GTGAAGTGCC CAGAAGCTTC TGGGTCTGCC ACACAGCCCC CCTCTCCCCG
ACATGGCCTC TCTCCTTCCT GAGGGCCCTC TCAAGCCCCC TGCCCCACCC CACAGTGTTC
CCTGAGAGCA GCCAAGGCAG ATGTGAGAGC AAAGGCCACG ATCCCAGTGT CAGGGGTGGC
ATCTTCATGA AGGAAGGGCC CGAAGCCCTC ATGGGCGGAC CCCCCTTGAG CCTGTCTGAA
GGTCTGGCCC TTCGTGCATT CAGGCCCAGG CCCCCCAGCA GAGATGCCAC CACTGCTTTC
TCGGGGGATG TGTCCTCTCC CCTCACCCTG ACCTGCTGGC ATTTAGACTC ACCCGTGTAC
CTAGTAAAGG CTTTCTGC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPX3glutathione peroxidase 3 precursor [Homo sapiens]. 409e-114O
Contig/Assembly ProteinGPX6glutathione peroxidase 6 precursor [Homo sapiens]. 3259e-89O
Contig/Assembly ProteinGPX5epididymal secretory glutathione peroxidase isoform 1 precursor [Homo sapiens]. 3072e-83O
Contig/Assembly ProteinGPX1glutathione peroxidase 1 isoform 1 [Homo sapiens]. 1602e-39O
Contig/Assembly ProteinGPX2glutathione peroxidase 2 [Homo sapiens]. 1465e-35O
Contig/Assembly ProteinGPX4phospholipid hydroperoxide glutathione peroxidase, mitochondrial isoform A precursor [Homo sapiens]. 83.65e-16O
Contig/Assembly ProteinGPX5epididymal secretory glutathione peroxidase isoform 2 precursor [Homo sapiens]. 83.26e-16O
Contig/Assembly ProteinGPX7glutathione peroxidase 7 precursor [Homo sapiens]. 83.26e-16O
Contig/Assembly ProteinGPX4phospholipid hydroperoxide glutathione peroxidase, mitochondrial isoform C precursor [Homo sapiens]. 82.41e-15
Contig/Assembly ProteinGPX8probable glutathione peroxidase 8 [Homo sapiens]. 78.62e-14O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGpx3glutathione peroxidase 3 isoform 1 [Mus musculus]. 422e-118O
Contig/Assembly ProteinGpx3glutathione peroxidase 3 isoform 2 [Mus musculus]. 414e-115O
Contig/Assembly ProteinGpx6glutathione peroxidase 6 precursor [Mus musculus]. 3194e-87O
Contig/Assembly ProteinGpx5epididymal secretory glutathione peroxidase precursor [Mus musculus]. 3064e-83O
Contig/Assembly ProteinGpx1glutathione peroxidase 1 [Mus musculus]. 1763e-44O
Contig/Assembly ProteinGpx2glutathione peroxidase 2 [Mus musculus]. 1465e-35O
Contig/Assembly ProteinGpx4phospholipid hydroperoxide glutathione peroxidase, nuclear isoform 2 precursor [Mus musculus]. 83.64e-16O
Contig/Assembly ProteinGpx4phospholipid hydroperoxide glutathione peroxidase, nuclear isoform 1 precursor [Mus musculus]. 821e-15
Contig/Assembly ProteinGpx7glutathione peroxidase 7 precursor [Mus musculus]. 75.51e-13O
Contig/Assembly ProteinGpx8probable glutathione peroxidase 8 [Mus musculus]. 68.61e-11O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPX3glutathione peroxidase 3 [Canis lupus familiaris]. 424e-119O
Contig/Assembly ProteinGPX5epididymal secretory glutathione peroxidase precursor [Canis lupus familiaris]. 3051e-82O
Contig/Assembly ProteinLOC612189PREDICTED: similar to Plasma glutathione peroxidase precursor (GSHPx-P) [Canis familiaris]. 2832e-76O
Contig/Assembly ProteinLOC488328PREDICTED: similar to glutathione peroxidase 6 [Canis familiaris]. 2473e-65O
Contig/Assembly ProteinGPX1glutathione peroxidase 1 [Canis lupus familiaris]. 1603e-39O
Contig/Assembly ProteinGPX2glutathione peroxidase 2 [Canis lupus familiaris]. 1472e-35O
Contig/Assembly ProteinLOC478059PREDICTED: similar to F26E4.12 isoform 1 [Canis familiaris]. 82.41e-15O
Contig/Assembly ProteinLOC478059PREDICTED: similar to F26E4.12 isoform 2 [Canis familiaris]. 76.38e-14O
Contig/Assembly ProteinLOC606843PREDICTED: similar to F26E4.12 [Canis familiaris]. 73.27e-13O
Contig/Assembly ProteinLOC475348PREDICTED: similar to glutathione peroxidase 7 [Canis familiaris]. 70.16e-12O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPX3glutathione peroxidase 3 precursor [Bos taurus]. 429e-120O
Contig/Assembly ProteinGPX6glutathione peroxidase 6 [Bos taurus]. 3458e-95O
Contig/Assembly ProteinGPX5epididymal secretory glutathione peroxidase [Bos taurus]. 3172e-86O
Contig/Assembly ProteinGPX1glutathione peroxidase 1 [Bos taurus]. 1642e-40O
Contig/Assembly ProteinGPX2glutathione peroxidase 2 [Bos taurus]. 1499e-36O
Contig/Assembly ProteinGPX4phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor [Bos taurus]. 85.12e-16O
Contig/Assembly ProteinGPX8probable glutathione peroxidase 8 [Bos taurus]. 844e-16O
Contig/Assembly ProteinGPX7glutathione peroxidase 7 precursor [Bos taurus]. 821e-15O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinGPX3glutathione peroxidase 3 [Sus scrofa]. 464e-131O
Contig/Assembly ProteinGPX6glutathione peroxidase 6 [Sus scrofa]. 3523e-97O
Contig/Assembly ProteinGPX5epididymal secretory glutathione peroxidase precursor [Sus scrofa]. 3132e-85O
Contig/Assembly ProteinGPX1glutathione peroxidase 1 [Sus scrofa]. 1611e-39O
Contig/Assembly ProteinGPX2glutathione peroxidase 2 [Sus scrofa]. 1494e-36O
Contig/Assembly ProteinGPX4phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor [Sus scrofa]. 83.63e-16O
Contig/Assembly ProteinLOC100519691PREDICTED: probable glutathione peroxidase 8-like [Sus scrofa]. 83.63e-16O
Contig/Assembly ProteinLOC100515061PREDICTED: probable glutathione peroxidase 8-like [Sus scrofa]. 729e-13O
Contig/Assembly ProteinLOC100621417PREDICTED: glutathione peroxidase 7-like [Sus scrofa]. 58.98e-09


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010040B03ADR01_0040_B03.bDB785022 AK398746
ADR010083F04ADR01_0083_F04.bDB788897 
BMWN10066C07BMWN1_0066_C07.bHX209575 
HTMT10098C10HTMT1_0098_C10.bFS671136 AK392754
ILNT10044G05ILNT1_0044_G05.bHX230222 
ILNT10051F03ILNT1_0051_F03.bHX230770 
LVRM10017G02LVRM1_0017_G02.bBP453049 AK232746
TCH010083E08TCH01_0083_E08.bCJ028463 

  

SNPs: 4      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
81C200.500WSTTC/F
T200.500TTT/F
168C200.500WSCGC/R
T200.500CGT/R
552C400.667WSCTC/L
T200.333CTT/L
565A300.500WNAGC/S
G300.500GGC/G


Alignment:      TOP

20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
HTMT1_0098_C10.b : ttttccgacggtacgaggccxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0051_F03.b : nnccacggtacgaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0066_C07.b : ntttcgatggtacgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0044_G05.b : nnnggggacggtacgacgccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : ...GAGACGGACTGTGCCCGGGAGTCAGACAGCGTCTCAGGAGAGCTCGAGACGCACCCC
---------+---------+---------+---------+---------+---------+ 57
HTMT1_0098_C10.b : xxxGAGACGGACTGTGCCCGGGAGTCAGACAGCGTCTCAGGAGAGCTCGAGACGCACCCC
ILNT1_0051_F03.b : xxxgAGACGGACTGTGCCCGGGAGTCGGACAGCGTCTCAGGAGAGCTCGAGACGCACCCC
BMWN1_0066_C07.b : xxxxAGACGGACCGTTCCCGGGAGTCAGACAGCGTCTCAGGAGAGCTCGAGACGCACCCC
ILNT1_0044_G05.b : xxxgAGACGGACTGTGCCCGGGAGTCAGACAGCGTCTCAGGAGAGCTCGAGACGCACCCC
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : CAGCCAGCCATGGCCCGGTTCTTTCGGGCATCCTGCCTTATCTCCCTGCTCCTGGCCGGC
---------+---------+---------+---------+---------+---------+ 117
HTMT1_0098_C10.b : CAGCCAGCCATGGCCCGGTTCTTTCGGGCATCCTGCCTTATCTCCCTGCTCCTGGCCGGC
ILNT1_0051_F03.b : CAGCCAGCCATGGCCCGGTTCTTCCGGGCATCCTGCCTTATCTCCCTGCTCCTGGCCGGC
BMWN1_0066_C07.b : CAGCCAGCCATGGCCCGGTTCTTCCGGGCATCCTGCCTTATCTCCCTGCTCCTGGCCGGC
ILNT1_0044_G05.b : CAGCCAGCCATGGCCCGGTTCTTTCGGGCATCCTGCCTTATCTCCCTGCTCCTGGCCGGC
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : TTCCTCCCGCCGAGCCGGGGACAGGAGAAGTCGAAGACGGACTGCTATCGTGGTGTGAGT
---------+---------+---------+---------+---------+---------+ 177
HTMT1_0098_C10.b : TTCCTCCCGCCGAGCCGGGGACAGGAGAAGTCGAAGACGGACTGCTATCGTGGTGTGAGT
ILNT1_0051_F03.b : TTCCTCCCGCCGAGCCGGGGACAGGAGAAGTCGAAGACGGACTGCTATCGCGGTGTGAGT
BMWN1_0066_C07.b : TTCCTCCCGCCGAGCCGGGGACAGGAGAAGTCGAAGACGGACTGCTATCGCGGTGTGAGT
ILNT1_0044_G05.b : TTCCTCCCGCCGAGCCGGGGACAGGAGAAGTCGAAGACGGACTGCTATCGTGGTGTGAGT
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : GGCACCATCTATGAGTATGGAGCCCTCACCATCGACGGGGAGGAGTACATCCCTTTTAAG
---------+---------+---------+---------+---------+---------+ 237
HTMT1_0098_C10.b : GGCACCATCTATGAGTATGGAGCCCTCACCATCGACGGGGAGGAGTACATCCCTTTTAAG
ILNT1_0051_F03.b : GGCACCATCTATGAGTATGGAGCCCTCACCATCGACGGGGAGGAGTACATCCCTTTTAAG
BMWN1_0066_C07.b : GGCACCATCTATGAGTATGGAGCCCTCACCATCGACGGGGAGGAGTACATCCCTTTTAAG
ILNT1_0044_G05.b : GGCACCATCTATGAGTATGGAGCCCTCACCATCGACGGGGAGGAGTACATCCCTTTTAAG
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : AAGTACGCTGGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACGGGC
---------+---------+---------+---------+---------+---------+ 297
HTMT1_0098_C10.b : AAGTACGCTGGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACGGGC
ILNT1_0051_F03.b : AAGTACGCTGGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACGGGC
BMWN1_0066_C07.b : AAGTACGCTGGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACGGGC
ILNT1_0044_G05.b : AAGTACGCTGGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACGGGC
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : CAGTACGTTGAACTGAATGCACTGCAGGAAGAGTTTGAACCCTTTGGCCTCGTCATTCTG
---------+---------+---------+---------+---------+---------+ 357
HTMT1_0098_C10.b : CAGTACGTTGAACTGAATGCACTGCAGGAAGAGTTTGAACCCTTTGGCCTCGTCATTCTG
ILNT1_0051_F03.b : CAGTACGTTGAACTGAATGCACTGCAGGAAGAGTTTGAACCCTTTGGCCTCGTCATTCTG
BMWN1_0066_C07.b : CAGTACGTTGAACTGAATGCACTGCAGGAAGAGTTTGCACCCTTTGGCCTCGTCATTCTG
ILNT1_0044_G05.b : CAGTACGTTGAACTGAATGCACTGCAGGAAGAGTTTGAACCCTTTGGCCTCGTCATTCTG
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : GGCTTCCCCTGCAACCAATTTGGAAAACAGGAACCGGGAGACAACTCGGAGATTCTGTCC
---------+---------+---------+---------+---------+---------+ 417
HTMT1_0098_C10.b : GGCTTCCCCTGCAACCAATTTGGAAAACAGGAACCGGGAGACAACTCGGAGATTCTGTCC
ILNT1_0051_F03.b : GGCTTCCCCTGCAACCAATTTGGAAAACAGGAACCGGGAGACAACTCGGAGATTCTGTCC
BMWN1_0066_C07.b : GGCTTCCCCTGCAACCAATTTGGAAAACAGGAACCGGGAGACAACTCGGAGATTCTGTCC
ILNT1_0044_G05.b : GGCTTCCCCTGCAACCAATTTGGAAAACAGGAACCGGGAGACAACTCGGAGATTCTGTCC
ADR01_0040_B03.b : ttgaaa
TCH01_0083_E08.b : nnggctaggactataacxxxxxxxxx
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : ACTCTCAGGTATGTCCGACCAGGTGGGGGCTTCATCCCCAATTTCCAGCTCTTTGAGAAA
---------+---------+---------+---------+---------+---------+ 477
HTMT1_0098_C10.b : ACTCTCAGGTATGTCCGACCAGGTGGGGGCTTCATCCCCAATTTCCAGCTCTTTGAGAAA
ILNT1_0051_F03.b : ACTCTCAGGTATGTCCGACCAGGTGGGGGCTTCATCCCCAATTTCCAGCTCTTTGAGAAA
BMWN1_0066_C07.b : ACTCTCAGGTATGTCCGACCAGGTGGGGGCTTCATCCCCAATTTCCAGCTCTTTGAGAAA
ILNT1_0044_G05.b : ACTCTCAGGTATGTCCGACCAGGTGGGGGCTTCATCCCCAATTTCCAGCTCTTTGAGAAA
ADR01_0040_B03.b : caxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgCAGCTCTTTGAGAAA
TCH01_0083_E08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGAGAAA
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
---------+---------+---------+---------+---------+---------+ 537
HTMT1_0098_C10.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
ILNT1_0051_F03.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
BMWN1_0066_C07.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
ILNT1_0044_G05.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
ADR01_0040_B03.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
TCH01_0083_E08.b : GGGGACGTGAACGGGGAGAAGGAGCAGAAGTTCTACACGTTCCTGAAGAACGCCTGTCCT
ADR01_0083_F04.b :
LVRM1_0017_G02.b :
20110601C-013095 : CCTACTTCGGAGCTCCTGGGCTCACCGGGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
---------+---------+---------+---------+---------+---------+ 597
HTMT1_0098_C10.b : CCTACTTCGGAGCTTCTGGGCTCACCGAGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
ILNT1_0051_F03.b : CCTACTTCGGAGCTCCTGGGCTCACCGAGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
BMWN1_0066_C07.b : CCTACTTCGGAGCTCCTGGGCTCACCGGGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
ILNT1_0044_G05.b : CCTACTTCGGAGCTTCTGGGCTCACCGAGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
ADR01_0040_B03.b : CCTACTTCGGAGCTCCTGGGCTCACCGGGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
TCH01_0083_E08.b : CCTACTTCGGAGCTCCTGGGCTCACCGGGCCGCCTATTCTGGGAACCCATGAAGGTCCAT
ADR01_0083_F04.b : taannnggacaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0017_G02.b :
20110601C-013095 : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
---------+---------+---------+---------+---------+---------+ 657
HTMT1_0098_C10.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
ILNT1_0051_F03.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
BMWN1_0066_C07.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
ILNT1_0044_G05.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
ADR01_0040_B03.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
TCH01_0083_E08.b : GACATCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
ADR01_0083_F04.b : xxxxxCCGCTGGAACTTTGAGAAGTTCCTGGTGGGGCCCGACGGTGTGCCCGTCATGCGC
LVRM1_0017_G02.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013095 : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
---------+---------+---------+---------+---------+---------+ 717
HTMT1_0098_C10.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
ILNT1_0051_F03.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
BMWN1_0066_C07.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
ILNT1_0044_G05.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
ADR01_0040_B03.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
TCH01_0083_E08.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
ADR01_0083_F04.b : TGGTACCACCGCACCACCATCAACACTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
LVRM1_0017_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxCTGTCAAGCTGGACATCCTGGCCTACATGCGGCGG
20110601C-013095 : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
---------+---------+---------+---------+---------+---------+ 777
HTMT1_0098_C10.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAAGGCCCACCCACCCTGTGCCCACCCC
ILNT1_0051_F03.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
BMWN1_0066_C07.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
ILNT1_0044_G05.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
ADR01_0040_B03.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
TCH01_0083_E08.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
ADR01_0083_F04.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
LVRM1_0017_G02.b : CGGGCAGCCCTGGAGGCCAAGCGGCAGTAATGGAGGCCCACCCCACCCTGTGCCCACCCC
20110601C-013095 : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
---------+---------+---------+---------+---------+---------+ 836
HTMT1_0098_C10.b : CCAGGGGCT*GGGGAGAACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
ILNT1_0051_F03.b : ACAGGGGCT*GGGGAGGACTCTGTTTCAGAAGGAATCCATTTCTACAACCACACCGCTGT
BMWN1_0066_C07.b : CCAGGGGCTGGGGGAGGACTCTGTTCAAGAAGGGAATCATTTCTACAACCACGCCGCTGT
ILNT1_0044_G05.b : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
ADR01_0040_B03.b : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
TCH01_0083_E08.b : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
ADR01_0083_F04.b : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
LVRM1_0017_G02.b : CCAGGGGCT*GGGGAGGACTCTGTTCAGGAAGGAATCCATTTCTACAACCACGCCGCTGT
20110601C-013095 : CCCCTGCTAGACCCCTCACTAGGACACAAGGGCCCAGCCCGACAGGAAGGTGTGCACACA
---------+---------+---------+---------+---------+---------+ 896
HTMT1_0098_C10.b : CCCCTGCTAGACCCCTCACTAGGACACAAGGGCCCAGCCCGAACGGGAGGTGGGCACCCA
ILNT1_0051_F03.b : CCCCTGCTAAACCCCTCACTAAGGACACAGGGCCCAACCCGACCGGAAGtgtgcacccac
BMWN1_0066_C07.b : CCCTTGCTAGAACCCTCACTAAGACAAAAGGGCCCAACCCGACAGGAAGGGGTGGCACCA
ILNT1_0044_G05.b : CCCCTGCTAGACCCCTCACTAGGACACCAGGGCCCAGCCCGACGGGAAGGTGTGCACACA
ADR01_0040_B03.b : CCCCTGCTAGACCCCTCACTAGGACACAAGGGCCCAGCCCGACAGGAAGGTGTGCACACA
TCH01_0083_E08.b : CCCCTGCTAGACCCCTCACTAGGACACAAGGGCCCAGCCCGACAGGAAGGTGTGCACACA
ADR01_0083_F04.b : CCCCTGCTAGGCCCCTCACTAGGACACAAGGGCCCAGCCCGACAGGAAGGTGTGCACACA
LVRM1_0017_G02.b : CCCCTGCTAGACCCCTCACTAGGACACAAGGGCCCAGCCCGACAGGAAGGTGTGCACACA
20110601C-013095 : ACTGTGTCTGTACTGCTGTGCTTGTGAGCGTGTGCATGCGTGCCTACAGGTGTGTGTGAT
---------+---------+---------+---------+---------+---------+ 956
HTMT1_0098_C10.b : ACTGTGTCTGTACTGCTGggctgtgaacatgtgcatgctgtgctacggttggggtgaatt
ILNT1_0051_F03.b : tgtgtctgtccggctgtgcttgtgacatgtgcatgcgtgcctaagggtgtgtgtgatcca
BMWN1_0066_C07.b : ACTGTGTCTGTACTGCTtgccttgtgaccgtgtgctgcctgcccacaggtgtgtgtgatc
ILNT1_0044_G05.b : ACTGTGTCTGTACTGCTGTGCCTGGGAGCATGTGCATGCGTGCCTACGGGTGTGTGTGAT
ADR01_0040_B03.b : ACTGTGTCTGTACTGCTGTGCTTGTGAGCGTGTGCATGCGTGCCTACAGGTGTGTGTGAT
TCH01_0083_E08.b : ACTGTGTCTGTACTGCTGTGCTTGTGAGCGTGTGCATGCGTGCCTACAGGTGTGTGTGAT
ADR01_0083_F04.b : ACTGTGTCTGTACTGCTGTGCTTGTGAGCGTGTGCATGCGTGCCTACAGGTGTGTGTGAT
LVRM1_0017_G02.b : ACTGTGTCTGTACTGCTGTGCTTGTGAGCGTGTGCATGCGTGCCTACAGGTGTGTGTGAT
20110601C-013095 : CACAGGAGTGCACTGCCACTTACAGGCGTGGCGACCTGCAGGAATCCCCAGGCCTGTAAG
---------+---------+---------+---------+---------+---------+ 1016
HTMT1_0098_C10.b : ccaggagtggatggccactacagggctggcgacctgcaggaatcccccggcctgtaatgt
ILNT1_0051_F03.b : ggattgcccggccatttaaggcgtggccacctgcaggaaatccccggccggtaagtttgc
BMWN1_0066_C07.b : caaggaatgccctgccccttaaggggtgggcgacctcggggatcccccggccctgaattt
ILNT1_0044_G05.b : CACAGGAATGGCCTGCCACTTACAGGCGTGNCGACCCTGCAGAATCCCCAGCCCTGTAAG
ADR01_0040_B03.b : CACAGGAGTGCACTGCCACTTACAGGCGTGGCGACCTGCAGGAATCCCCAGGCCTGTAAG
TCH01_0083_E08.b : CACAGGAGTGCACTGCCACTTACAGGCGTGGCGACCTGCAGGAATCCCCAGGCCTGTAAG
ADR01_0083_F04.b : CACAGGAGTGCACTGCCACTTACAGGCGTGGCGACCTGCAGGAATCCCCAGGCCTGTAAG
LVRM1_0017_G02.b : CACAGGAGTGCACTGCCACTTACAGGCGTGGCGACCTGCAGGAATCCCCAGGCCTGTAAG
20110601C-013095 : TGTGCCCACAGCTGTGTGCCAGGGGTGGGGTGCCGGAGCGACACTCCCCTCTCGCTCTGG
---------+---------+---------+---------+---------+---------+ 1076
HTMT1_0098_C10.b : gcccaaaacttgttcccggggcagggtccgaacccccccccccctccccggtttccggcc
ILNT1_0051_F03.b : cccccactgttttcccgggggcggggttccgaactcccccccccctccccctcgggttcc
BMWN1_0066_C07.b : ggcccacactttttgccagggtggggggccgaaacacccccccccccctctggttctggc
ILNT1_0044_G05.b : TGTGCCCACcccttttttgccggggccagggtgccggaacctcccctccctcccgcttcg
ADR01_0040_B03.b : TGTGCCCACAGCTGTGTGCCANGGGTGGGGTGCCGGAGCGACACTCCCCTCTCGCTCTGG
TCH01_0083_E08.b : TGTGCCCACAGCTGTGTGCCAGGGGTGGGGTGCCGGAGCGACACTCCCCTCTCGCTCTGG
ADR01_0083_F04.b : TGTGCCCACAGCTGTGTGCCAGGGGTGGGGTGCCGGAGCGACACTCCCCTCTCGCTCTGG
LVRM1_0017_G02.b : TGTGCCCACAGCTGTGTGCCAGGGGCGGGGTGCCGGAGCGTCACTCCCCTCTCGCTCTGG
20110601C-013095 : TTCTCTGCTCCAATGATCACAACTCACTTTCAGTGAGCCCAAAGGAAAAAACCAGTTCTA
---------+---------+---------+---------+---------+---------+ 1136
HTMT1_0098_C10.b : caaggatccaaccatttcaggggcccaaggaaaaacattctaaacaatgggcgccaaccg
ILNT1_0051_F03.b : cgctccaagattacaaactcttttccagggccccgaagagaaaaccagtttagaagtcat
BMWN1_0066_C07.b : ccaagaacacactcttttcgggaccccaagaaaaaccntttgaatttgtggtcggcctaa
ILNT1_0044_G05.b : ggtctctgccccatgaatccactccctttcggggacccaaggaaaaaaccgttcaaattc
ADR01_0040_B03.b : TTCTCTGCTCCAATGATCACAACTCACTTTCAGTGAGCCCAAAGGAAAAAACCAGTTCTA
TCH01_0083_E08.b : TTCTCTGCTCCAATGATCACAACTCACTTTCAGTGAGCCCAAAGGAAAAAACCAGTTCTA
ADR01_0083_F04.b : TTCTCTGCTCCAATGATCACAACTCACTTTCAGTGAGCCCAAAGGAAAAAACCAGTTCTA
LVRM1_0017_G02.b : TTCTCTGCTCCAATGATCACAACTCACTTTCAGTGAGCCCAAAGGAAAAAACCAGTTCTA
20110601C-013095 : GATTCAGTTGGTCTGCTCTAACCTGGCCTTTAGCCCTTGGGGCCAGCATCTCCCACTGCC
---------+---------+---------+---------+---------+---------+ 1196
HTMT1_0098_C10.b : gattaaccctggggcgatttcccgggtccaaaccccaggaaggccaaattttgggttcac
ILNT1_0051_F03.b : tgggtcgccctacacggaatataccccttggggcgaggttcccccctgttctcgaaaaac
BMWN1_0066_C07.b : cgggctttaccctggggaaattctccgtgccaaacaccaagaaatcccaaattttggttc
ILNT1_0044_G05.b : aatgggccggctcacctgaaatttaccctgtgggcaacattccccagggctccaaacccc
ADR01_0040_B03.b : GATTCAGTTGGTCTGCTCTAACCTGGCCTTTAGCCTTTGGGGGCAGCATCTCCCACTGCC
TCH01_0083_E08.b : GATTCAGTTGGTCTGCTCTAACCTGGCCTTTAGCCCTTGGGGCCAGCATCTCCCACTGCC
ADR01_0083_F04.b : GATTCAGTTGGTCTGCTCTAACCTGGCCTTTAGCCCTTGGGGCCAGCATCTCCCACTGCC
LVRM1_0017_G02.b : GATTCAGTTGGTCTGCTCTAACCTGGCCTTTAGCCCTTGGGGCCAGCATCTCCCACTGCC
20110601C-013095 : TCCAGACACCACCAGTGAAGTGCCCAGAAGCTTCTGGGTCTGCCACACAGCCCCCCTCTC
---------+---------+---------+---------+---------+---------+ 1256
HTMT1_0098_C10.b : aacccccctccaaaggcctccttttgaggccctaaccccgcccccctttttttaaacccg
ILNT1_0051_F03.b : gcttaagggtgcgaaaattgtgggttgcgccagagccccttttcacaagggatgtttccc
BMWN1_0066_C07.b : ccaacccccctccccaaggccctcttttggagcccatcccccccacccacttttcgaaag
ILNT1_0044_G05.b : catggagagcgccaaaatttggggttgtcaaaaccccccctcccaaagggcctctccttc
ADR01_0040_B03.b : TCCAGACACCACCAGTGAAGTGCCCAGAAGCTTCTGGGTTCTGCACACAGCCCCCCTCTC
TCH01_0083_E08.b : TCCAGACACCACCAGTGAAGTGCCCAGAAGCTTCTGGGTCTGCCACACAGCCCCCCTCTC
ADR01_0083_F04.b : TCCAGACACCACCAGTGAAGTGCCCAGAAGCTTCTGGGTCTGCCACACAGCCCCCCTCTC
LVRM1_0017_G02.b : TCCAGACACCACCAGTGAAGTGCCCAGAANCTTCTGGGTCTGCCACACAGCCCCCCTCTC
20110601C-013095 : CCCGACATGGCCTCTCTCCTTCCTGAGGGCCCTCTCAAGCCCCCTGCCCCACCCCACAGT
---------+---------+---------+---------+---------+---------+ 1316
HTMT1_0098_C10.b : agatggaaaagcccccccggggggggctttaaaggccccaccgggc
ILNT1_0051_F03.b : ttcagagcgtctttagaccagcccccccacggtttctgcaagaccgtagaatatatcaaa
BMWN1_0066_C07.b : cagaggataaaaaagccctcctgtgggggttcttagagggcacctcggacccccttgtgt
ILNT1_0044_G05.b : tgagggccttagcgcccgcccccccaagttccctcaaaaccccgggaatgaaaaaagccc
ADR01_0040_B03.b : CCCGACATGGCCTCTCTCCTTTCTGGGGGCCCTCTCAAGCCCCCTGCCCCACCCCACAGT
TCH01_0083_E08.b : CCCGACATGGCCTCTCTCCTTCCTGAGGGCCCTCTCAAGCCCCCTGCCCCACCCCACAGT
ADR01_0083_F04.b : CCCGACATGGCCTCTCTCCTTCCTGAGGGCCCTCTCAAGCCCCCTGCCCCACCCCACAGT
LVRM1_0017_G02.b : CCCGACATGGCCTCGCTCCTGTCTGAAGGCCCACTCAGGCCCCtgcgccaacccgagtgg
20110601C-013095 : GTTCCCTGAGAGCAGCCAAGGCAGATGTGAGAGCAAAGGCCACGATCCCAGTGTCAGGGG
---------+---------+---------+---------+---------+---------+ 1376
HTMT1_0098_C10.b :
ILNT1_0051_F03.b : gcccgctaccccgcgagggtgtgttcagagagtgagcgtcgtccgccgccactctgtaat
BMWN1_0066_C07.b : gggctctttcagccacacaactttgggtgtcctctctgtgctccggtctcataaaaaaaa
ILNT1_0044_G05.b : tctccgggcggggtgcctttatgaagggccaacccttggggacccctgcggctggagggg
ADR01_0040_B03.b : GTTCCCTGAaagcaccaaggcaaatgtgagaacaaaggcccgatccagtgtgcagggtgg
TCH01_0083_E08.b : GTTTCCTGAGAGCAGCCAAGGCAGATGTGAGAGCCAAGGCCACGATCCCAGTGGCAGGGt
ADR01_0083_F04.b : GTTCCCTGAGAGCAGCCAAGGCAGATGTGAGAGCAAAGGCCACGATCCCAGTGTCAGGGG
LVRM1_0017_G02.b : ttcctgacaccacccaggcacatgggagagaaggggccgcatcccagcgtcaggaattgg
20110601C-013095 : TGGCATCTTCATGAAGGAAGGGCCCGAAGCCCTCATGGGCGGACCCCCCTTGAGCCTGTC
---------+---------+---------+---------+---------+---------+ 1436
HTMT1_0098_C10.b :
ILNT1_0051_F03.b : atacggttggtgtatagaaagggg
BMWN1_0066_C07.b : aagaaccgc
ILNT1_0044_G05.b : ccttgatt
ADR01_0040_B03.b : catcttcggaaggaggggccccaaccctccgggccgacccccttgaactggctgaaggct
TCH01_0083_E08.b : ggcatcttctgaaagaggggcccaagccctcctgggcggaccccccttgagctggctgaa
ADR01_0083_F04.b : TGGCATCTTCATGAAGGAAGGGCCCGAAGCCCTCATGGGCGGACCCCCCTTGAGCCTGTC
LVRM1_0017_G02.b : agcgatgtgaataggcgagcaacccaaggagacgcgactgcgttccgacaaaatgggg
20110601C-013095 : TGAAGGTCTGGCCCTTCGTGCATTCAGGCCCAGGCCCCCCAGCAGAGATGCCACCACTGC
---------+---------+---------+---------+---------+---------+ 1496
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : ggccctttggattcggcccagggcccagcaaaaagcaccatgctcttcggggaaggtcct
TCH01_0083_E08.b : gtctgggccttcgtgattccggccaggcccccggcaaaaatgccccccggttcttccggg
ADR01_0083_F04.b : TGAAGGTCTGGCCCTTCGTGCATTCAGGCCCAGGCCCCCCAGCAGAGATGCCACCACTGC
LVRM1_0017_G02.b :
20110601C-013095 : TTTCTCGGGGGATGTGTCCTCTCCCCTCACCCTGACCTGCTGGCATTTAGACTCACCCGT
---------+---------+---------+---------+---------+---------+ 1556
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : ccctccccggacggcggattaaatcccccggtaccaaaaagccttcggccaaaaaaaaaa
TCH01_0083_E08.b : gagtggccctccccctcccctgactggcgggattgaatctccccggtgactaataaggct
ADR01_0083_F04.b : TTTCTCGGGGGATGTGTCCTCTCCCCTCACCCTGACCTGCTGGCATTTAGACTCACCCGT
LVRM1_0017_G02.b :
20110601C-013095 : GTACCTAGTAAAGGCTTTCTGC......................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : aggcctggcccactgtagccggccctctaaaccccagggcagttaacaaacactttttga
TCH01_0083_E08.b : ttttgcaacaaaaaaaaaaaaaataaaaaaaaggcccatttgctcaatgtagtgcggccg
ADR01_0083_F04.b : GTACCTAGTAAAGGCTTTCTGCagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : aagggcctaagaggaataacaggcggcctttttacctgaggaaaggattggatttagaaa
TCH01_0083_E08.b : cctcaaaatccctgaggggcaaatttacgttcccgtttttgaaaagggccttaagggagc
ADR01_0083_F04.b : nnaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : tttttggggattgaacccaaatacccgggaaaattgtgaggtaaccccgccgcgtttcaa
TCH01_0083_E08.b : attn
ADR01_0083_F04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b : atataaccaaggtttgttttttccgttccccccggaataaatggtttccccgaag
TCH01_0083_E08.b :
ADR01_0083_F04.b : xxxxxxxxxaaactccgactggaaaaagctaacttggactttggaagaactacttctggg
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b : ggggcaaattggaaaccccccaaatttaagcctgggaaaaaaattttagaaaggggaaca
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b : accccaactcgcctcaatttctcacagaatttaaaatttcacggcctggtctttttggtt
LVRM1_0017_G02.b :
20110601C-013095 : ............................................................
---------+---------+---------+---------+---------+---------+ 1578
HTMT1_0098_C10.b :
ILNT1_0051_F03.b :
BMWN1_0066_C07.b :
ILNT1_0044_G05.b :
ADR01_0040_B03.b :
TCH01_0083_E08.b :
ADR01_0083_F04.b : taaaacccaggttttgccccccccttt
LVRM1_0017_G02.b :