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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013104

Length: 805

Sequence:  [FASTA format sequence]
GGCGGCCGCC TCCCGCCTCG CGGGTTGGGC GGCGGGCCGT CCGGGGTGTG GCCGCGGTGG
GCCCCTCCTC CGCGGGCTCC AGGCCGCGGG GGTCCCTCCG CTCTCAGGTC TCCGCTCACT
TCTCCACCGC TGCTCGCTGC CCGCCCTCCA ACCGGACCAT GGCCCACGCG GAGCGCACCT
TCATCGCGGT CAAGCCGGAC GGCGTCCAGC GCGGTCTCGT GGGCGAGATC ATCAAGCGCT
TCGAGCAGAA GGGATTCCGC CTCGTTGCCT TGAAGTTCCT TCAGGCCTCT GAGGAACTCC
TGAAGCAGCA CTACATTGAC CTGAAAGACC GGCCCTTCTT CCCGGGACTG GTGAAGTACA
TGGGCTCAGG GCCAGTTGTG GCGATGGTCT GGGAGGGGCT GAATGTAGTG AAGACAGGCC
GAGTGATGCT TGGAGAGACC AACCCAGCGG ATTCTAAGCC AGGCACCATT CGCGGGGACT
TCTGCATTCA GGTTGGCAGG AACATCATTC ATGGCAGTGA TTCAGTAAAA AGCGCTGAGA
AAGAAATCAG CCTGTGGTTT AAGCCCGAAG AGTTGGTTGA GTACAAGTCT TGTGCTTTTG
ACTGGATCTA TGAATAAGAG GTGGACAGAG CATTGGTCCC CTTTGGCACG GCTTGATGTG
TCCTGAGACA CAGCTCTTCA TTCCATGGAC TTGGAAGCAG TAGGATGGGT CTTCCCTGAG
GCGTATTTAC CAATAAAGCC TTTAAAAACT GAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		NME1-NME2	NME1-NME2 protein [Homo sapiens].	300	1e-81
		NME2	nucleoside diphosphate kinase B isoform a [Homo sapiens].	295	4e-80	O
		NME2	nucleoside diphosphate kinase B isoform a [Homo sapiens].	295	4e-80	O
		NME2	nucleoside diphosphate kinase B isoform a [Homo sapiens].	295	4e-80	O
		NME2	nucleoside diphosphate kinase B isoform a [Homo sapiens].	295	4e-80	O
		NME1	nucleoside diphosphate kinase A isoform a [Homo sapiens].	283	1e-76	O
		NME1	nucleoside diphosphate kinase A isoform b [Homo sapiens].	281	5e-76	O
		NME3	nucleoside diphosphate kinase 3 [Homo sapiens].	224	5e-59	O
		NME4	nucleoside diphosphate kinase, mitochondrial precursor [Homo sapiens].	187	1e-47	O
		NME2	nucleoside diphosphate kinase B isoform b [Homo sapiens].	141	8e-34	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Nme2	nucleoside diphosphate kinase B [Mus musculus].	291	5e-79	O
		Nme2	nucleoside diphosphate kinase B [Mus musculus].	291	5e-79	O
		Gm5566	PREDICTED: nucleoside diphosphate kinase B-like [Mus musculus].	288	3e-78	O
		Nme1	nucleoside diphosphate kinase A [Mus musculus].	288	3e-78	O
		Gm5566	PREDICTED: nucleoside diphosphate kinase B-like [Mus musculus].	288	3e-78	O
		Nme3	nucleoside diphosphate kinase 3 [Mus musculus].	215	4e-56	O
		Gm4862	PREDICTED: nucleoside diphosphate kinase B-like [Mus musculus].	207	6e-54	O
		Gm4862	PREDICTED: nucleoside diphosphate kinase B-like [Mus musculus].	197	8e-51	O
		Nme4	nucleoside diphosphate kinase, mitochondrial precursor [Mus musculus].	180	1e-45	O
		Nme7	nucleoside diphosphate kinase 7 isoform 2 [Mus musculus].	73.9	1e-13

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		NME2	nucleoside diphosphate kinase B [Canis lupus familiaris].	296	1e-80	O
		NME1	nucleoside diphosphate kinase A [Canis lupus familiaris].	281	6e-76	O
		LOC476767	PREDICTED: similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase) [Canis familiaris].	269	2e-72	O
		LOC609873	PREDICTED: similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase) [Canis familiaris].	268	4e-72	O
		LOC483943	PREDICTED: similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase) [Canis familiaris].	252	2e-67
		LOC611984	PREDICTED: similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase) [Canis familiaris].	246	2e-65	O
		LOC489789	PREDICTED: similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase) [Canis familiaris].	241	6e-64	O
		LOC476911	PREDICTED: similar to Nucleoside diphosphate kinase, mitochondrial precursor (NDP kinase, mitochondrial) (NDK) (nm23-H4) (Nucleoside diphosphate kinase D) (NDPKD) [Canis familiaris].	180	1e-45
		LOC611104	PREDICTED: similar to Nucleoside diphosphate kinase 3 (NDK 3) (NDP kinase 3) (Nucleoside diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23) [Canis familiaris].	178	5e-45	O
		LOC611514	PREDICTED: similar to Nucleoside diphosphate kinase, mitochondrial precursor (NDP kinase, mitochondrial) (NDK) (nm23-H4) (Nucleoside diphosphate kinase D) (NDPKD) [Canis familiaris].	148	5e-36

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		NME2	nucleoside diphosphate kinase B [Bos taurus].	304	5e-83	O
		NME1	nucleoside diphosphate kinase A 1 [Bos taurus].	281	6e-76	O
		NME1	nucleoside diphosphate kinase A 1 [Bos taurus].	281	6e-76	O
		LOC100337235	PREDICTED: NME1-NME2 protein-like [Bos taurus].	232	2e-61
		NME3	nucleoside diphosphate kinase 3 [Bos taurus].	224	7e-59	O
		NME4	nucleoside diphosphate kinase 4 [Bos taurus].	141	3e-35	O
		NME5	PREDICTED: non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)-like [Bos taurus].	72.8	3e-13	O
		NME7	nucleoside diphosphate kinase 7 [Bos taurus].	69.3	4e-12
		NME5	nucleoside diphosphate kinase homolog 5 [Bos taurus].	67.4	1e-11	O
		NME6	PREDICTED: nucleoside diphosphate kinase type 6-like isoform 2 [Bos taurus].	67	2e-11	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		NME2	nucleoside diphosphate kinase B [Sus scrofa].	311	3e-85	O
		NME1	nucleoside diphosphate kinase A [Sus scrofa].	281	4e-76	O
		LOC100514398	PREDICTED: nucleoside diphosphate kinase 3-like [Sus scrofa].	222	2e-58	O
		NME4	nucleoside diphosphate kinase, mitochondrial [Sus scrofa].	183	8e-47	O
		LOC100152763	PREDICTED: nucleoside diphosphate kinase 7, partial [Sus scrofa].	75.1	4e-14
		LOC100621441	PREDICTED: nucleoside diphosphate kinase homolog 5-like [Sus scrofa].	68.9	3e-12	O
		LOC100520587	PREDICTED: nucleoside diphosphate kinase 6-like isoform 2 [Sus scrofa].	67.4	9e-12	O
		LOC100520587	PREDICTED: nucleoside diphosphate kinase 6-like isoform 5 [Sus scrofa].	67.4	9e-12	O
		LOC100520587	PREDICTED: nucleoside diphosphate kinase 6-like isoform 4 [Sus scrofa].	67.4	9e-12	O
		LOC100520587	PREDICTED: nucleoside diphosphate kinase 6-like isoform 3 [Sus scrofa].	67.4	9e-12	O