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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013212

Length: 1,045

Sequence:  [FASTA format sequence]
GTGCGAGCAA GATGGCCACT ACCAAGCGAG TGTTGTGGAC TTGCAGAGGA GGTGGATGAT
AAAGTTCTTC ATGCTGCTTT TATCCCTTTT GGAGACATCA CAGATATCCA GATTCCTCTG
GATTATGAAA CAGAAAAGCA CCGAGGATTT GCTTTTGTTG AGTTTGAGTT GGCCGAGGAT
GCTGCAGCAG CTATTGACAA CATGAATGAA TCTGAGCTCT TTGGACGGAC AATTCGTGTC
AATTTGGCAA AACCAATGAG GATTAAGGAA GGCTCTTCCA GACCAGTTTG GTCCGATGAT
GACTGGTTGA AGAAGTTTTC TGGAAAGACT CTTGAAGAGA ATAAAGAAGA AGAAGGCTCA
GAGCCTCCCA AAGTAGAAAC CCAGGAGGGG GAGCCCACTG CCAAAAAGGC CCGGTCAAAC
CCCCAAGTGT ACATGGACAT CAAGATTGGG AACAAACCAG CCGGCCGCAT CCAGATACTC
TTGCGTTCAG ACGTCGTTCC CATGACAGCA GAGAACTTCC GCTGCCTGTG CACCCACGAG
AAGGGCTTTG GCTTCAAGGG CAGCAGCTTC CACCGCATCA TCCCCCAGTT CATGTGCCAG
GGCGGCGATT TCACCAACCA CAACGGCACT GGGGGCAAGT CCATCTATGG GAAGAAGTTT
GATGATGAAA ACTTTATCCT CAAGCACACG GGACCAGGCC TGCTCTCCAT GGCCAATTCT
GGCCCAAACA CCAATGGCTC CCAGTTCTTC CTGACGTGTG ACAAGACAGA TTGGCTGGAC
GGCAAGCACG TCGTGTTCGG GGAGGTCACA GAAGGCCTGG ACGTCTTGCG GCAGATTGAG
GCCCAGGGCA GCAAGGACGG GAAAGCCAAG CAGAAGGTGA TCATCTCTGA CTGTGGGGAG
TACGCGTGAG GCGCCAGAGG GCTCCTGTTG GCGGCAGCAG GGCCTTGTGT CCTGGTCAGC
ATGGGGCAGC TCCTCTGCGG GCAAGCCTGG CCCTCTCTGG CTCTGCCCCA GGTGTGGCCG
AGGGCCCGAG TGCCACCCTT CCCTC

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		PPIE	peptidyl-prolyl cis-trans isomerase E isoform 1 [Homo sapiens].	564	e-161	O
		PPIE	peptidyl-prolyl cis-trans isomerase E isoform 4 [Homo sapiens].	527	e-150	O
		PPIE	peptidyl-prolyl cis-trans isomerase E isoform 2 [Homo sapiens].	527	e-150	O
		PPIF	peptidyl-prolyl cis-trans isomerase F, mitochondrial precursor [Homo sapiens].	259	4e-69	O
		PPIA	peptidyl-prolyl cis-trans isomerase A [Homo sapiens].	240	1e-63	O
		PPIAL4C	peptidylprolyl cis-trans isomerase A-like 4A/B/C [Homo sapiens].	216	3e-56	O
		PPIAL4B	peptidylprolyl cis-trans isomerase A-like 4A/B/C [Homo sapiens].	216	3e-56	O
		PPIAL4A	peptidylprolyl cis-trans isomerase A-like 4B [Homo sapiens].	216	3e-56	O
		LOC650157	PREDICTED: peptidyl-prolyl cis-trans isomerase A-like [Homo sapiens].	213	2e-55	O
		PPIAL4G	peptidylprolyl cis-trans isomerase A-like 4G [Homo sapiens].	213	2e-55	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Ppie	peptidyl-prolyl cis-trans isomerase E [Mus musculus].	563	e-161	O
		Ppif	peptidyl-prolyl cis-trans isomerase F, mitochondrial precursor [Mus musculus].	251	5e-67	O
		Ppia	peptidyl-prolyl cis-trans isomerase A [Mus musculus].	241	7e-64	O
		Gm9234	PREDICTED: peptidyl-prolyl cis-trans isomerase A-like [Mus musculus].	233	2e-61	O
		Gm9234	PREDICTED: peptidyl-prolyl cis-trans isomerase A-like [Mus musculus].	233	2e-61	O
		Ranbp2	E3 SUMO-protein ligase RanBP2 [Mus musculus].	214	9e-56
		Ppid	peptidyl-prolyl cis-trans isomerase D [Mus musculus].	197	1e-50	O
		Ppih	peptidyl-prolyl cis-trans isomerase H isoform 1 [Mus musculus].	193	2e-49	O
		LOC433064	PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Mus musculus].	193	2e-49	O
		LOC433064	PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Mus musculus].	193	2e-49	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC607232	PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) isoform 2 [Canis familiaris].	566	e-161	O
		LOC607232	PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) isoform 3 [Canis familiaris].	533	e-151	O
		LOC610502	PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor (PPIase) (Rotamase) (Cyclophilin F) [Canis familiaris].	233	2e-61	O
		LOC609903	PREDICTED: similar to peptidylprolyl isomerase A isoform 1 [Canis familiaris].	227	2e-59	O
		LOC606861	PREDICTED: similar to peptidylprolyl isomerase A isoform 1 [Canis familiaris].	226	2e-59	O
		LOC608151	PREDICTED: similar to peptidylprolyl isomerase A isoform 1 [Canis familiaris].	223	2e-58	O
		LOC609977	PREDICTED: similar to peptidylprolyl isomerase A isoform 1 [Canis familiaris].	210	2e-54	O
		LOC606899	PREDICTED: similar to peptidyl prolyl isomerase H isoform 1 [Canis familiaris].	193	3e-49	O
		LOC478337	PREDICTED: similar to peptidylprolyl isomerase B precursor isoform 2 [Canis familiaris].	193	2e-49	O
		LOC606899	PREDICTED: similar to peptidyl prolyl isomerase H isoform 3 [Canis familiaris].	193	3e-49	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		PPIE	peptidyl-prolyl cis-trans isomerase E [Bos taurus].	564	e-161	O
		LOC100296550	PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Bos taurus].	246	3e-65	O
		LOC100296550	PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Bos taurus].	246	3e-65	O
		LOC100337215	PREDICTED: TRIM5/cyclophilin A fusion protein-like [Bos taurus].	239	4e-63	O
		PPIA	PREDICTED: TRIM5/cyclophilin A fusion protein-like [Bos taurus].	239	4e-63	O
		PPIA	PREDICTED: TRIM5/cyclophilin A fusion protein-like isoform 1 [Bos taurus].	239	4e-63	O
		PPIF	peptidyl-prolyl cis-trans isomerase F, mitochondrial precursor [Bos taurus].	238	7e-63	O
		PPIA	PREDICTED: TRIM5/CypA fusion protein-like isoform 1 [Bos taurus].	229	3e-60	O
		PPIA	PREDICTED: TRIM5/CypA fusion protein-like [Bos taurus].	229	3e-60	O
		RANBP2	E3 SUMO-protein ligase RanBP2 [Bos taurus].	213	3e-55

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		LOC100516562	PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1 [Sus scrofa].	568	e-162	O
		LOC100620554	PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial-like [Sus scrofa].	251	4e-67	O
		LOC100152612	PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial [Sus scrofa].	251	4e-67	O
		PPIA	peptidyl-prolyl cis-trans isomerase A [Sus scrofa].	242	3e-64	O
		LOC100628155	PREDICTED: peptidyl-prolyl cis-trans isomerase F, mitochondrial-like [Sus scrofa].	237	7e-63	O
		LOC100518075	PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Sus scrofa].	233	2e-61	O
		RANBP2	PREDICTED: e3 SUMO-protein ligase RanBP2 [Sus scrofa].	209	3e-54
		LOC100515957	PREDICTED: peptidyl-prolyl cis-trans isomerase D-like [Sus scrofa].	194	7e-50	O
		LOC100523448	PREDICTED: peptidyl-prolyl cis-trans isomerase H-like [Sus scrofa].	191	8e-49	O
		LOC100523448	PREDICTED: peptidyl-prolyl cis-trans isomerase H-like isoform 3 [Sus scrofa].	191	8e-49	O

Alignment:      TOP

20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
CLNT1_0076_E08.b :  nttggttnnnnnnnncccgttagcgttcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0097_E01.b : nntttttttnnggacttacctcagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0135_E10.b :             nnnnncctatagctgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0033_H01.b :      nnnnggctaggacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0016_B08.b :                                                             
ITT01_0032_A10.b :                                                             


20110601C-013212 : ........................GTGCGAGCAAGATGGCCACTACCAAGCGAGTGTTGT
                   ---------+---------+---------+---------+---------+---------+ 36
CLNT1_0076_E08.b : xxxxxxxxxxxxxxxxxxctttggGTGCGAGCAAGATGGCCACTACCAAGCGAGTGTTGC
CLNT1_0097_E01.b : xxxxxxxxxxxxxxxxxxxxxxxxGTGCGAGCAAGATGGCCACTACCAAGCGAGTGTTGT
CLNT1_0135_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxGTGCGAGCAAGATGGCCACTACCAAGCGAGTGTTGT
TCH01_0033_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxGTGCGAGCAAGATGGCCACTACCAAGCGAGTGTTGT
TES01_0016_B08.b :           ntttccgctgtggctacgggggcAGATGGCC*CTACCAAGCGAGTGTTGT
ITT01_0032_A10.b :                                     nnnggataaacaxxxxxxxxxxxx


20110601C-013212 : GGACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
                   ---------+---------+---------+---------+---------+---------+ 96
CLNT1_0076_E08.b : GTACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
CLNT1_0097_E01.b : GGACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
CLNT1_0135_E10.b : GGACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
TCH01_0033_H01.b : GGACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
TES01_0016_B08.b : GGACTTGCAGAGGAGGTGGATGATAAAGTTCTTCATGCTGCTTTTATCCCTTTTGGAGAC
ITT01_0032_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCATGCTGCTTTTATCCCTTTTGGAGAC


20110601C-013212 : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
                   ---------+---------+---------+---------+---------+---------+ 156
CLNT1_0076_E08.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
CLNT1_0097_E01.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
CLNT1_0135_E10.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
TCH01_0033_H01.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
TES01_0016_B08.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT
ITT01_0032_A10.b : ATCACAGATATCCAGATTCCTCTGGATTATGAAACAGAAAAGCACCGAGGATTTGCTTTT


20110601C-013212 : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
                   ---------+---------+---------+---------+---------+---------+ 216
CLNT1_0076_E08.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
CLNT1_0097_E01.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
CLNT1_0135_E10.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
TCH01_0033_H01.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
TES01_0016_B08.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG
ITT01_0032_A10.b : GTTGAGTTTGAGTTGGCCGAGGATGCTGCAGCAGCTATTGACAACATGAATGAATCTGAG


20110601C-013212 : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
                   ---------+---------+---------+---------+---------+---------+ 276
CLNT1_0076_E08.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
CLNT1_0097_E01.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
CLNT1_0135_E10.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
TCH01_0033_H01.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
TES01_0016_B08.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT
ITT01_0032_A10.b : CTCTTTGGACGGACAATTCGTGTCAATTTGGCAAAACCAATGAGGATTAAGGAAGGCTCT


20110601C-013212 : TCCAGACCAGTTTGGTCCGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA
                   ---------+---------+---------+---------+---------+---------+ 336
CLNT1_0076_E08.b : TCCAGACCAGTTTGGTCCGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA
CLNT1_0097_E01.b : TCCAGACCAGTTTGGTCCGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA
CLNT1_0135_E10.b : TCCAGACCAGTTTGGTCCGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA
TCH01_0033_H01.b : TCCAGACCAGTTTGGTCCGATGATGACTGGTTAAAGAAGTTTTCTGGAAAGACTCTTGAA
TES01_0016_B08.b : TCCAGACCAGTTTGGTCCGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA
ITT01_0032_A10.b : TCCCGACCAGTTTGGTCTGATGATGACTGGTTGAAGAAGTTTTCTGGAAAGACTCTTGAA


20110601C-013212 : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC
                   ---------+---------+---------+---------+---------+---------+ 396
CLNT1_0076_E08.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC
CLNT1_0097_E01.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC
CLNT1_0135_E10.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGGAGAAACCCAGGAGGGGGAGCCC
TCH01_0033_H01.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC
TES01_0016_B08.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC
ITT01_0032_A10.b : GAGAATAAAGAAGAAGAAGGCTCAGAGCCTCCCAAAGTAGAAACCCAGGAGGGGGAGCCC


20110601C-013212 : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
                   ---------+---------+---------+---------+---------+---------+ 456
CLNT1_0076_E08.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
CLNT1_0097_E01.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
CLNT1_0135_E10.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
TCH01_0033_H01.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
TES01_0016_B08.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA
ITT01_0032_A10.b : ACTGCCAAAAAGGCCCGGTCAAACCCCCAAGTGTACATGGACATCAAGATTGGGAACAAA


20110601C-013212 : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
                   ---------+---------+---------+---------+---------+---------+ 516
CLNT1_0076_E08.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
CLNT1_0097_E01.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
CLNT1_0135_E10.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
TCH01_0033_H01.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
TES01_0016_B08.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC
ITT01_0032_A10.b : CCAGCCGGCCGCATCCAGATACTCTTGCGTTCAGACGTCGTTCCCATGACAGCAGAGAAC


20110601C-013212 : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC
                   ---------+---------+---------+---------+---------+---------+ 576
CLNT1_0076_E08.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC
CLNT1_0097_E01.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC
CLNT1_0135_E10.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC
TCH01_0033_H01.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC
TES01_0016_B08.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAACAGCTTCCACCGC
ITT01_0032_A10.b : TTCCGCTGCCTGTGCACCCACGAGAAGGGCTTTGGCTTCAAGGGCAGCAGCTTCCACCGC


20110601C-013212 : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
                   ---------+---------+---------+---------+---------+---------+ 636
CLNT1_0076_E08.b : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
CLNT1_0097_E01.b : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
CLNT1_0135_E10.b : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
TCH01_0033_H01.b : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
TES01_0016_B08.b : ATCATCCCCCAGTTCATGCGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC
ITT01_0032_A10.b : ATCATCCCCCAGTTCATGTGCCAGGGCGGCGATTTCACCAACCACAACGGCACTGGGGGC


20110601C-013212 : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACGGGACCA
                   ---------+---------+---------+---------+---------+---------+ 696
CLNT1_0076_E08.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACGGGACCA
CLNT1_0097_E01.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACGGGACCA
CLNT1_0135_E10.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACAGGACCA
TCH01_0033_H01.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACGGGACCA
TES01_0016_B08.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACAGGACCA
ITT01_0032_A10.b : AAGTCCATCTATGGGAAGAAGTTTGATGATGAAAACTTTATCCTCAAGCACACGGGACCA


20110601C-013212 : GGCCTGCTCTCCATGGCCAATTCTGGCCCAAACACCAATGGCTCCCAGTTCTTCCTGACG
                   ---------+---------+---------+---------+---------+---------+ 756
CLNT1_0076_E08.b : GGCCTGCTCTCCATGGCCAATTCTGGCCCAAACACCCACGGCTCCCAGTTCTTCCTGACG
CLNT1_0097_E01.b : GGCCTGCTCTCCATGGCCAATTCTGGCCCAAACACCAACGGCTCCCAGTTCTTCCTGACG
CLNT1_0135_E10.b : GGCCTGCTCTCCATGGCTAATTCTGGCCCAAACACCAATGGCTCCCAGTTCTTCCTGACG
TCH01_0033_H01.b : GGCCTGCTCTCCATGGCCAATTCTGGCCCAAACACCAATGGCTCCCAGTTCTTCCTGACG
TES01_0016_B08.b : GGCCTGCTCTCCATGGCTAATTCTGGCCCAAACACCAATGGCTCCCAGTTCTTCCTGACG
ITT01_0032_A10.b : GGCCTGCTCTCCATGGCCAATTCTGGCCCAAACACCAATGGCTCCCAGTTCTTCCTGACG


20110601C-013212 : TGTGACAAGACAGATTGGCTGGACGGCAAGCACGTCGTGTTCGGGGAGGTCACAGAAGGC
                   ---------+---------+---------+---------+---------+---------+ 816
CLNT1_0076_E08.b : TGTGACAAGACAGATTGGCTGGACGGCAAGCACGTTGTGTTTGGGGAGGTCACGGAAGGC
CLNT1_0097_E01.b : TGTGNACAGACAGATTGGCTGGACGGCAAGCACGTTGTGTTTGGGGAGGTCACGGAAGGC
CLNT1_0135_E10.b : TGTGACAAGACAGATTGGCTGGACGGCAAGCACGTCGTGTTCGGGGGAGTCACAGAAGGC
TCH01_0033_H01.b : TGTGACAAGACAGATTGGCTGGACGGGCAGCACGTCGTGTTCNGGGAGGTCACAGAAAGC
TES01_0016_B08.b : TGTGACAAGACAGATTGGCTGGACGGCAAGCACGTCGTGTTCGGGGAGGTCACAGAAGGC
ITT01_0032_A10.b : TGTGACAAGACAGATTGGCTGGACGGCAAGCACGTCGTGTTCGGGGAGGTCACAGAAGGC


20110601C-013212 : CTGGACGTCTTGCGGCAGATTGAGGCCCAGGGCAGCAAGGACGGGAAAGCCAAGCAGAAG
                   ---------+---------+---------+---------+---------+---------+ 876
CLNT1_0076_E08.b : CTGGACGTCTTGCGGCAGATTGAGCCCCA*GGCAGCAGGACGGG**AAGCCCAGCAGAAG
CLNT1_0097_E01.b : CTGGACGTCTTGCNGCAGATTGAGGCCCANGGCAGCAAGGACGGGAAAGCCCAGCAGAAG
CLNT1_0135_E10.b : CTGAACGTCTTGCGGCAGATTGAGGCCCAGGGCAGCAGGGACGGG*AAGCCCAACCGAAG
TCH01_0033_H01.b : CTGGACGTCTTGCGGCAGATTGAGGCCCAGGGCAGCAAGGACGGGAAAGCCCAGCAGAAG
TES01_0016_B08.b : CTGGACGTCTTGCGGCAGATTGAGGGCCCAGGGCAGCAGGACGGGAAAGCCAAGCAGAAG
ITT01_0032_A10.b : CTGGACGTCTTGCGGCAGATTGAGGCCCAGGGCAGCAAGGACGGGAAGCCCAAGCAGAAG


20110601C-013212 : GTGATCATCTCTGACTGTGGGGAGTACGCGTGAGGCGCCAGAGGGCTCCTGTTGGCGG**
                   ---------+---------+---------+---------+---------+---------+ 934
CLNT1_0076_E08.b : GTGATCATCTCCGACTGTGGGGAGTACGCGTGAGcgccggaaggctctgttggcgcagca
CLNT1_0097_E01.b : GTGATCATCTCCGACTGTGGGGAGTACGCGTGAGcgccggaggnctccctgttggcgcag
CLNT1_0135_E10.b : GTGATCATCTCTGACTGTGGGGAGTACCCTTGAAGCGCCAGAGGCTTCCTGTTGGCGgca
TCH01_0033_H01.b : GTGATCATCTCCGACTGTGGGGAGTACGCGTGAGGCGCCTGAGGGCTCCTGTTGGCGG**
TES01_0016_B08.b : GTGATCATCTCTGACTGTGGGGAGTACGCGTGAGGCGCCAGAGGGCTCCTGGTGGCGGGC
ITT01_0032_A10.b : GTGATCATCTCCGACTGTGGGGAGTACGCGTGAGGTGCCAGAGGGCTCCTGTTGGCGG**


20110601C-013212 : **CAGCAGGGCCTTGTGTCCTGGTCAGCATGGGGCAGCTCCTCTGCGGGCAAGCCTGGCC
                   ---------+---------+---------+---------+---------+---------+ 992
CLNT1_0076_E08.b : gggccttgtgtctgntcgcatggagcactcctctgcaagcacgcctggctcctctgctct
CLNT1_0097_E01.b : caggggcttgtgtcctggtcagcatggagcagctcctctgcgagcacggcttggctcctc
CLNT1_0135_E10.b : agcaacagggcctggggtcctggtcagcatggggcaactcttcggaggcaaagccgggct
TCH01_0033_H01.b : **CAGCAGGGCCCTGTGTCCTGGTCAgcatggggcagctcctctgcgggcaaagctgggc
TES01_0016_B08.b : AGCAGCAGGGCCTTGTGTCCTGGTCAGCatggggcagctcctctgcaggcacagcctggc
ITT01_0032_A10.b : **CAGCANGGGCTTGTGTCCTGGTCAGCATGGGGCAGCTCCTCTGCGGGCAAGCCTGGCC


20110601C-013212 : CTCTCTGGCTCTGCCCCAGGTGTGGCCGAGGGCCCGAGTGCCACCCTTCCCTC.......
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b : gccccagggtgctgaggcctgaatgcccccttcttctggacactggcatggctttcaggc
CLNT1_0097_E01.b : tggctctgccccaggtgtgcctgaaggcctgaatgccaccctcccccttaacagctggga
CLNT1_0135_E10.b : tcctttggtttgccccaggtgggcttaaggcctgagtgccccccttccctcggaagcgtt
TCH01_0033_H01.b : tccntctgctcctgccccagtgttggcgaaggccccagtggcaccccttcctctggacag
TES01_0016_B08.b : ctcctctgggtctgccccagttgtggctgaaggcctgaatggcaccctcccctctggacg
ITT01_0032_A10.b : CTCTCTGGCTCTGCCCCAGGTGTGGCCGAGGGCCCGAGTGCCACCCTTCCCTCtggacag


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b : tttgcgcccggcctccttggcccacaggtgaacttaaaatttcctcgggaaaaaaaccaa
CLNT1_0097_E01.b : tggcccttccaagctttgctgccaggggccctcctgggcccacaagggggaccttaaaat
CLNT1_0135_E10.b : gcatgggctttcagcctttgggccgggctcttctggcccacagtggaacctaaaattttc
TCH01_0033_H01.b : ctgtgcaggccctttccagccttgctggcagggccttcctgggcccgcaagggtgacctt
TES01_0016_B08.b : ctgggcatggccttcccacctttgctgccagggctctcctgggccaacatgggaccctta
ITT01_0032_A10.b : ctgtgcatggcctttccagctttgctgcaagggcctctcctgggcccgcagtgtgactct


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b : ttttgtggnaaaaaaaaaaaaaaaaaaanannnnnnaannnnnnnnnnnngggccttggt
CLNT1_0097_E01.b : tttccttcggggaaaaaaaaccaggttttgtgggaaaaaaaaaaaaaaaaaannnnnnnn
CLNT1_0135_E10.b : tccggaaaataaccccattttggaaaaaaaaaaaaaaaagccccttgtccaatgtgggcc
TCH01_0033_H01.b : aaaattttccctgggaaaaaaacccaattttttaaaaaaaaaaaaaaaaaaaaaaaggcc
TES01_0016_B08.b : aacttttcttcgggaaaataaatctagttttggaaaaaaaaaaaaaaaaaaaaagggcca
ITT01_0032_A10.b : taaacattttcctctggtaaaataatctagtttttgcaaaaaaaaaaaaaaaaaaaaaag


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b : ctacttggggcggccctaatattaaaaaaaccccccccccgaggaaaaaaaaaaacatgg
CLNT1_0097_E01.b : nnnnnnnaaaanaaaaaaaaangggggcctttttctctcacctttggggcgccctaaaat
CLNT1_0135_E10.b : ggccctaaaatttaaaaaaaaccccccccccccgaccaaaaaaaaaagaattgtgtgtat
TCH01_0033_H01.b : ccagtgttccactcaggtccgcc                                    
TES01_0016_B08.b : tgtgctcaacttcaggtccgggccctaaataatctaaaaaaaacctccccccccccctga
ITT01_0032_A10.b : gccccttgtgctcaactgcaggtccggcccctcttaatttccctggagggccaaagctta


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b : gtggttttttgcccttggggaaaaaaaacccatataaaattttttgccctgtggtggcc
CLNT1_0097_E01.b : tttaaaaaaaaccccccccccccccgcacgaaaaaaaaaagggattggtgttggtattt
CLNT1_0135_E10.b : tttttttgccttaggtcaaaaaaaacaccatttaaaattttttcccttcttggtgggcac
TCH01_0033_H01.b :                                                             
TES01_0016_B08.b : accgaaaaaaaaggaagcactgggtggttactgttttggccctaaggggtcaaaaaagaa
ITT01_0032_A10.b : cctaaccactttttgtaaaagggtcccaaaggggcgcaattaagctaggccggcgcgcct


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b :                                                             
CLNT1_0097_E01.b :                                                             
CLNT1_0135_E10.b : catttatatgggccggggaggaatttctcctccccaaacccgcggggggggcctctggtg
TCH01_0033_H01.b :                                                             
TES01_0016_B08.b : acctcccatttccaaaaaggtttttccgcacctccgggtgg                  
ITT01_0032_A10.b : tttaaaactcggaacggaaaaagcgcacttggattttggaaaaaactatttt       


20110601C-013212 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1045
CLNT1_0076_E08.b :                                                             
CLNT1_0097_E01.b :                                                             
CLNT1_0135_E10.b : tttttaaaaaaaaataaaaaaagatggttttctccacaaa                   
TCH01_0033_H01.b :                                                             
TES01_0016_B08.b :                                                             
ITT01_0032_A10.b :