[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-013254
Length:
2,043
Sequence:
[FASTA format sequence]
GGATTGCTTC TGTCTGTACT GTTAGTATGG CGTCCGCGAG AAAGCGGAGA GGCGGCGGGA
ACTCGGGTCG GGTTCTCGCT CTGTGCTGAC AGCAACCTCG CTCTGTACTG ACAGCAACCC
AGGGCCGAGT GGGCTATGGG GGAGCCCGGC TCCCTGGTCA CGGGAGGCCG CGCCGGTGAC
CGGAGCTGGT GCTTGCGGCG GGTGGGGATG AACGCCGAGT GGCTGCTGCT GGAGGACGGA
AAAGAGGTGA CTGTAGGTCG AGGATTTGGT GTCACATACC AGTTGGTTTC AAAAATTTGC
CCTCTGATGA TTTCCCGAAA CCACTGTGTC TTGAAGCAGA ATGCCGAGGG CCAGTGGACA
ATTACGGACA ACAAGAAGTC TGCAGAACTG ATCACTCCCT ATAATTTCTC AGGCTGCATA
TGAATGCAGT GGTTCGGAGA AGGTTGGCAG AGTCTGAATG GTGTTTGGCT GAACAGAGAA
CGTCTAGAAC CTTTAAAGGT CTATTCTATC CATGAGGGAG ACCACATCCA GCTTGGGGTG
CCTCTGGAAA ATAAGGAGAA TGCGGAGTAT GAATATGAAG TTACCGAAGA CGACTGGGAG
AGGGTTTATC CTTGTCTGTC CCTAAAGAGT GACCAAATGA TGGAAAAGAA TAAGGGCTTG
AGAACTAAAA GGAAGTTTAA TTTGGATGAG TTAGAGGGTT CTGGAGCTGA AGGCCCCTCA
ACTTTGAAAT CCAAAATAAG TAAAGTGTCT TGTGAACCTG GTCAACCAGT GAAGTCACAT
GAGAAAGGTA AAGTGGCTGG TCAGCTCAAT GAATATTTGG ATCCTAAGTT GACTTGTCTT
CAGCCAAGTG GGAAGGCCCT GGGGGCTCAT GTTTACCCAG TCCCTGCAAA AGTCGTAGAG
CTTCAGCACA GGAAGCAGAA AGCCTCAAAC CCTTCAGCAT CTCAGAGCAG CTTAGAGCTG
TTTAAGGTCA CCATGTCCAG GATTCTAAAG CTGAAAACAC AGATGCAGGA AAAACAGATC
GCTGTTCTGA ATGTGAAAAA ACAAACCCAA AAGGGAAACT CAAAGAAAAT TGTGAAAATG
GAGCAGGAAC TGCACGATTT ACAGTCCCAG CTGTGTGCAG AGCAGGCCCA GCAGCAGGCC
AGAGTGGAGC AGCTGGAGAA GACTTTCCAG GAAGAGCAGC AGCACCTGCA GGGTTTGGAG
AAAGAGCAAG GAGAAGAGGA CCTGAAGCAA CAGCTGGCCC AGGCCCTGCA GGAGCATCGG
GCTCTGATGG AAGAGCTAAA CCGCAGCAGG AAGGACTTTG AAGCAATCAT TCAAGCCAAG
AACAAAGAGC TGGAGCAGAC CAAGGAAGAG AAGGAGAAGG TGCAAGCACA GAAGGAGGAA
GTTCTTAGCC ACATGAATGA CGTGCTAGAA AACGAGCTTC AGTGTATTAT TTGCTCAGAA
TACTTCATTG AGGCTGTCAC CTTGAACTGT GCCCATAGTT TCTGCTCCTT CTGTATCAAT
GAGTGGATGA AGCGGAAGGT AGAATGCCCC ATTTGTCGGA AGGACATCAA GTCCAAAACA
CACTCCCTGG TTCTGGACAA TTGCATTAAT AAGATGGTAG ATAATCTGAG CTCAGAAGTG
AAAGAACGAC GAGTTGTTCT CATCAAGGAA CGAAAAGGTG AGTGGGTCTG AACAAGAGGT
GAGTCCCCTC AACCAAAGGC TTAGGATGAT TTTTTTGGAT GGAGAGGAGT CAACATAAAT
GATTCTTTTG TTTTGTTTTG TTTAAAGATT CTTGAGCTAA GTGAGAATTG GAAGATATGG
GGGAAAGTAA AGCAAGTTAA AGATAGTGAA TGTGTAAGAG TTGAGGTAGA ATAAACTAAT
ATTTGAGCAG CAGGGAATGG TATGGCTTGG GTGTACATGT CTTGGTTGCT GGCATAAAGA
TGTGATTAGA AAACAGTTTG CTGTGCTGGT CACTAGATGG TGCTGTTTGT CAAGACAGTT
TAGTTGCTGT CCATGTGTCA TTAAAAACCT TGGGTGTATA ATAAATTATA AATAGGATGT
GTA
SNP mapping information
| SNP ID | Rel. | Chr. | Location (cM) | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | RNF8 | E3 ubiquitin-protein ligase RNF8 isoform 1 [Homo sapiens]. | 707 | 0.0 | O |
|
| RNF8 | E3 ubiquitin-protein ligase RNF8 isoform 2 [Homo sapiens]. | 575 | e-164 | O |
|
| TRIM64B | putative tripartite motif-containing protein 64B [Homo sapiens]. | 55.8 | 1e-07 | O |
|
| TRIM64 | tripartite motif-containing protein 64 [Homo sapiens]. | 55.1 | 2e-07 | O |
|
| TRIM64C | putative tripartite motif-containing protein 64C [Homo sapiens]. | 54.7 | 3e-07 | O |
|
| TRIM39-RPP21 | TRIM39-RPP21 protein [Homo sapiens]. | 54.3 | 4e-07 | O |
|
| TRIM39 | tripartite motif-containing protein 39 isoform 2 [Homo sapiens]. | 54.3 | 4e-07 | O |
|
| TRIM39 | tripartite motif-containing protein 39 isoform 1 [Homo sapiens]. | 54.3 | 4e-07 | O |
|
| CHFR | E3 ubiquitin-protein ligase CHFR isoform 5 [Homo sapiens]. | 53.9 | 6e-07 | O |
|
| BMI1 | polycomb complex protein BMI-1 [Homo sapiens]. | 53.9 | 6e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| Rnf8 | E3 ubiquitin-protein ligase RNF8 [Mus musculus]. | 607 | e-174 | O |
|
| Trim39 | tripartite motif-containing protein 39 [Mus musculus]. | 54.3 | 4e-07 | O |
|
| Trim39 | tripartite motif-containing protein 39 [Mus musculus]. | 54.3 | 4e-07 | O |
|
| Bmi1 | polycomb complex protein BMI-1 [Mus musculus]. | 53.9 | 5e-07 | O |
|
| Chfr | E3 ubiquitin-protein ligase CHFR [Mus musculus]. | 53.9 | 5e-07 | O |
|
| Rfpl4b | ret finger protein-like 4B [Mus musculus]. | 52 | 2e-06 | O |
|
| Rnft1 | RING finger and transmembrane domain-containing protein 1 [Mus musculus]. | 52 | 2e-06 | O |
|
| Pcgf2 | polycomb group RING finger protein 2 [Mus musculus]. | 50.8 | 4e-06 | O |
|
| Pcgf2 | polycomb group RING finger protein 2 [Mus musculus]. | 50.8 | 4e-06 | O |
|
| Pcgf2 | polycomb group RING finger protein 2 [Mus musculus]. | 50.8 | 4e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC481775 | PREDICTED: similar to Ubiquitin ligase protein RNF8 (RING finger protein 8) isoform 2 [Canis familiaris]. | 756 | 0.0 | O |
|
| LOC481775 | PREDICTED: similar to CG6379-PA isoform 1 [Canis familiaris]. | 756 | 0.0 | O |
|
| LOC481775 | PREDICTED: similar to CG6379-PA isoform 3 [Canis familiaris]. | 756 | 0.0 | O |
|
| LOC487097 | PREDICTED: similar to Polycomb group ring finger 4 (Polycomb complex protein BMI-1) (RING finger protein 51) isoform 4 [Canis familiaris]. | 57 | 7e-08 | O |
|
| LOC477434 | PREDICTED: similar to Ubiquitin ligase protein CHFR (Checkpoint with forkhead and RING finger domains protein) isoform 4 [Canis familiaris]. | 54.7 | 3e-07 | O |
|
| LOC477434 | PREDICTED: similar to Ubiquitin ligase protein CHFR (Checkpoint with forkhead and RING finger domains protein) isoform 2 [Canis familiaris]. | 54.7 | 3e-07 | O |
|
| LOC477434 | PREDICTED: similar to checkpoint with forkhead and ring finger domains isoform 3 [Canis familiaris]. | 54.7 | 3e-07 | O |
|
| LOC477434 | PREDICTED: similar to Ubiquitin ligase protein CHFR (Checkpoint with forkhead and RING finger domains protein) isoform 1 [Canis familiaris]. | 54.7 | 3e-07 | O |
|
| LOC481703 | PREDICTED: similar to tripartite motif-containing 39 isoform 2 isoform 1 [Canis familiaris]. | 54.3 | 4e-07 | O |
|
| LOC481703 | PREDICTED: similar to tripartite motif-containing 39 isoform 2 isoform 2 [Canis familiaris]. | 54.3 | 4e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| RNF8 | E3 ubiquitin-protein ligase RNF8 [Bos taurus]. | 770 | 0.0 | O |
|
| CHFR | E3 ubiquitin-protein ligase CHFR [Bos taurus]. | 54.7 | 3e-07 | O |
|
| CHFR | PREDICTED: checkpoint with forkhead and ring finger domains [Bos taurus]. | 54.7 | 3e-07 | O |
|
| CHFR | PREDICTED: checkpoint with forkhead and ring finger domains [Bos taurus]. | 54.7 | 3e-07 | O |
|
| CHFR | PREDICTED: checkpoint with forkhead and ring finger domains [Bos taurus]. | 54.7 | 3e-07 | O |
|
| BMI1 | polycomb complex protein BMI-1 [Bos taurus]. | 53.9 | 5e-07 | O |
|
| LONRF3 | PREDICTED: LON peptidase N-terminal domain and ring finger 3 [Bos taurus]. | 51.2 | 3e-06 | O |
|
| LONRF3 | LON peptidase N-terminal domain and RING finger protein 3 [Bos taurus]. | 51.2 | 3e-06 | O |
|
| LONRF3 | PREDICTED: LON peptidase N-terminal domain and ring finger 3 isoform 2 [Bos taurus]. | 51.2 | 3e-06 | O |
|
| LONRF3 | PREDICTED: LON peptidase N-terminal domain and ring finger 3 isoform 1 [Bos taurus]. | 51.2 | 3e-06 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
| LOC100153408 | PREDICTED: e3 ubiquitin-protein ligase RNF8 [Sus scrofa]. | 862 | 0.0 | O |
|
| LOC100521199 | PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Sus scrofa]. | 216 | 5e-56 | O |
|
| LOC100156609 | PREDICTED: ret finger protein-like 4B-like [Sus scrofa]. | 57.4 | 3e-08 | O |
|
| CHFR | PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 1 [Sus scrofa]. | 54.7 | 2e-07 | O |
|
| CHFR | PREDICTED: e3 ubiquitin-protein ligase CHFR isoform 2 [Sus scrofa]. | 54.7 | 2e-07 | O |
|
| LOC100524209 | PREDICTED: tripartite motif-containing protein 43-like [Sus scrofa]. | 54.7 | 2e-07 | O |
|
| TRIM39 | tripartite motif-containing protein 39 [Sus scrofa]. | 54.3 | 3e-07 | O |
|
| LOC100520800 | PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]. | 53.9 | 3e-07 | O |
|
| LOC100624064 | PREDICTED: LOW QUALITY PROTEIN: RING finger protein 151-like, partial [Sus scrofa]. | 53.1 | 6e-07 | O |
|
| LONRF3 | PREDICTED: LON peptidase N-terminal domain and RING finger protein 3 isoform 2 [Sus scrofa]. | 51.2 | 2e-06 | O |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0071_G01.b : cxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : ....GGATTGCTTCTGTCTGTACTGTTAGTATGGCGTCCGCGAGAAAGCGGAGAGGCGGC
---------+---------+---------+---------+---------+---------+ 56
OVRM1_0071_G01.b : xxxxGGATTGCTTCTGTCTGTACTGTTAGTATGGCGTCCGCGAGAAAGCGGAGAGGCGGC
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : GGGAACTCGGGTCGGGTTCTCGCTCTGTGCTGACAGCAACCTCGCTCTGTACTGACAGCA
---------+---------+---------+---------+---------+---------+ 116
OVRM1_0071_G01.b : GGGAACTCGGGTCGGGTTCTCGCTCTGTGCTGACAGCAACCTCGCTCTGTACTGACAGCA
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : ACCCAGGGCCGAGTGGGCTATGGGGGAGCCCGGCTCCCTGGTCACGGGAGGCCGCGCCGG
---------+---------+---------+---------+---------+---------+ 176
OVRM1_0071_G01.b : ACCCAGGGCCGAGTGGGCTATGGGGGAGCCCGGCTCCCTGGTCACGGGAGGCCGCGCCGG
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : TGACCGGAGCTGGTGCTTGCGGCGGGTGGGGATGAACGCCGAGTGGCTGCTGCTGGAGGA
---------+---------+---------+---------+---------+---------+ 236
OVRM1_0071_G01.b : TGACCGGAGCTGGTGCTTGCGGCGGGTGGGGATGAACGCCGAGTGGCTGCTGCTGGAGGA
TCH01_0006_F04.b : ng
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : CGGAAAAGAGGTGACTGTAGGTCGAGGATTTGGTGTCACATACCAGTTGGTTTCAAAAAT
---------+---------+---------+---------+---------+---------+ 296
OVRM1_0071_G01.b : CGGAAAAGAGGTGACTGTAGGTCGAGGATTTGGTGTCACATACCAGTTGGTTTCAAAAAT
TCH01_0006_F04.b : gctaggacttgacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : TTGCCCTCTGATGATTTCCCGAAACCACTGTGTCTTGAAGCAGAATGCCGAGGGCCAGTG
---------+---------+---------+---------+---------+---------+ 356
OVRM1_0071_G01.b : TTGCCCTCTGATGATTTCCCGAAACCACTGTGTCTTGAAGCAGAATGCCGAGGGCCAGTG
TCH01_0006_F04.b : xxxxxxxxxxxxxxTTTCCCGAAACCACTGTGTCTTGAAGCAGAATGCCGAGGGCCAGTG
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : GACAATTACGGACAACAAGAAGTCTGCAGAACTGATCACTCCCTATAATTTCTCAGGCTG
---------+---------+---------+---------+---------+---------+ 416
OVRM1_0071_G01.b : GACAATTACGGACAACAAGAAGTCTGCAGAACTGATCACTCCCTATAATTTCTCAGGCTG
TCH01_0006_F04.b : GACAATTACGGACAACAAGAAGTCTGCAGAACTGATCACTCCCTATAATTTCTCAGGCTG
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : CATATGAATGCAGTGGTTCGGAGAAGGTTGGCAGAGTCTGAATGGTGTTTGGCTGAACAG
---------+---------+---------+---------+---------+---------+ 476
OVRM1_0071_G01.b : CATATGAATGCAGTGGTTCGGAGAAGGTTGGCAGAGTCTGAATGGTGTTTGGCTGAACAG
TCH01_0006_F04.b : CATATGAATGCAGTGGTTCGGAGAAGGTTGGCAGAGTCTGAATGGTGTTTGGCTGAACAG
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : AGAACGTCTAGAACCTTTAAAGGTCTATTCTATCCATGAGGGAGACCACATCCAGCTTGG
---------+---------+---------+---------+---------+---------+ 536
OVRM1_0071_G01.b : AGAACGTCTAGAACCTTTAAAGGTCTATTCTATCCATGAGGGAGACCACATCCAGCTTGG
TCH01_0006_F04.b : AGAACGTCTAGAACCTTTAAAGGTCTATTCTATCCATGAGGGAGACCACATCCAGCTTGG
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : GGTGCCTCTGGAAAATAAGGAGAATGCGGAGTATGAATATGAAGTTACCGAAGACGACTG
---------+---------+---------+---------+---------+---------+ 596
OVRM1_0071_G01.b : GGTGCCTCTGGAAAATAAGGAGAATGCGGAGTATGAATATGAAGTTACCGAAGACGACTG
TCH01_0006_F04.b : GGTGCCTCTGGAAAATAAGGAGAATGCGGAGTATGAATATGAAGTTACCGAAGACGACTG
TES01_0063_B12.b : tttacgcgttggctacggagttCCGAAGACGACTG
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : GGAGAGGGTTTATCCTTGTCTGTCCCTAAAGAGTGACCAAATGATGGAAAAGAATAAGGG
---------+---------+---------+---------+---------+---------+ 656
OVRM1_0071_G01.b : GGAGAGGGTTTATCCTTGTCTGTCCCTAAAGAGNGACCAAATGATGGAAAAGAATAAGGG
TCH01_0006_F04.b : GGAGAGGGTTTATCCTTGTCTGTCCCTAAAGAGTGACCAAATGATGGAAAAGAATAAGGG
TES01_0063_B12.b : GGAGAGGGTTTATCCTTGTCTGTCCCTAAAGAGTGACCAAATGATGGAAAAGAATAAGGG
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b :
20110601C-013254 : CTTGAGAACTAAAAGGAAGTTTAATTTGGATGAGTTAGAGGGTTCTGGAGCTGAAGGCCC
---------+---------+---------+---------+---------+---------+ 716
OVRM1_0071_G01.b : CTTGAGAACTAACAGGAAGTTTAATTTGGATGAGTTAGAGGGTTCTGGAACTGAGAGCCC
TCH01_0006_F04.b : CTTGAGAACTAAAAGGAAGTTTAATTTGGATGAGTTAGAGGGTTCTGGAGCTGAAGGCCC
TES01_0063_B12.b : CTTGAGAACTAAAAGGAAGTTTAATTTGGATGAGTTAGAGGGTTCTGGAGCTGAAGGCCC
LVRM1_0125_E02.b : cagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0046_F09.b : ttgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0068_H11.b :
20110601C-013254 : CTCAACTTTGAAATCCAAAATAAGTAAAGTGTCTTGTGAACCTGGTCAACCAGTGAAGTC
---------+---------+---------+---------+---------+---------+ 776
OVRM1_0071_G01.b : CTCAACTTTGNAATCCAAAATAA*TAAAGTGTCGTGTGAACCTGTTCAACCAGTGAAtca
TCH01_0006_F04.b : CTCAACTTTGAAATCCAAAATAAGTAAAGTGTCTTGTGAACCTGGTCAACCAGTGAAGTC
TES01_0063_B12.b : CTCAACTTTGAAATCCAAAATAAGTAAAGTGTCTTGTGAACCTGGTCAACCAGTGAAGTC
LVRM1_0125_E02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGTCTTGTGAACCTGGTCAACCAGTGAAGTC
THY01_0046_F09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAACCTGGTCAACCAGTGAAGTC
OVRT1_0068_H11.b :
20110601C-013254 : ACATGAGAAAGGTAAAGTGGCTGGTCAGCTCAATGAATATTTGGATCCTAAGTTGACTTG
---------+---------+---------+---------+---------+---------+ 836
OVRM1_0071_G01.b : cat
TCH01_0006_F04.b : ACATGAGAAAGGTAAAGTGGCTGGTCAGCTCAATGAATATTTGGATCCTAAGTTGACTTG
TES01_0063_B12.b : ACATGAGAAAGGTAAAGTGGCTGGTCAGCTCAATGAATATTTGGATCCTAAGTTGACTTG
LVRM1_0125_E02.b : ACATGAGAAAGGTAAAGTGGCTGGTCAGCTCAATGAATATTTGGATCCTAAGTTGACTTG
THY01_0046_F09.b : ACATGAGAAAGGTAAAGTGGCTGGTCAGCTCAATGAATATTTGGATCCTAAGTTGACTTG
OVRT1_0068_H11.b :
20110601C-013254 : TCTTCAGCCAAGTGGGAAGGCCCTGGGGGCTCATGTTTACCCAGTCCCTGCAAAAGTCGT
---------+---------+---------+---------+---------+---------+ 896
OVRM1_0071_G01.b :
TCH01_0006_F04.b : TCTTCAGCCAAGTGGGAAGGCCCTGGGGGCTCATGTTTATCCAGTCCCTGCAAAAGTCGT
TES01_0063_B12.b : TCTTCAGCCAAGTGGGAAGGCCCTGGGGGCTCATGTTTACCCAGTCCCTGCAAAAGTCGT
LVRM1_0125_E02.b : TCTTCAGCCAAGTGGGAAGGCCCTGGGGGCTCATGTTTACCCAGTCCCTGCAAAAGTCGT
THY01_0046_F09.b : TCTTCAGCCAAGTGGGAAGGCCCTGGGGGCTCATGTTTATCCAGTCCCTGCAAAAGTCGT
OVRT1_0068_H11.b :
20110601C-013254 : AGAGCTTCAGCACAGGAAGCAGAAAGCCTCAAACCCTTCAGCATCTCAGAGCAGCTTAGA
---------+---------+---------+---------+---------+---------+ 956
OVRM1_0071_G01.b :
TCH01_0006_F04.b : AGAGCTTCAGCACAGGAAGCAGAAAGCCTCAAACCCTTCAGCATCTCAGAGCAGCTTAGA
TES01_0063_B12.b : AGAGCTTCAGCACAGGAAGCAGAAAGCCTCAAACCCTTCAGCATCTCAGAGCAGCTTAGA
LVRM1_0125_E02.b : AGAGCTTCAGCACAGGAAGCAGAAAGCCTCAAACCCTTCAGCATCTCAGAGCAGCTTAGA
THY01_0046_F09.b : AGAGCTTCAGCACAGGAAGCAGAAAGCCTCAAACCCTTCAGCATCTCAGAGCAGCTTAGA
OVRT1_0068_H11.b :
20110601C-013254 : GCTGTTTAAGGTCACCATGTCCAGGATTCTAAAGCTGAAAACACAGATGCAGGAAAAACA
---------+---------+---------+---------+---------+---------+ 1016
OVRM1_0071_G01.b :
TCH01_0006_F04.b : GCTGTTTAAGGTCACCATGTCCAGGATTCTAAAGCTGAAAACACAGATGTAGGAAAAACA
TES01_0063_B12.b : GCTGTTTAAGGTCACCATGTCCAGGATTCTAAAGCTGAAAACACAGATGCAGGAAAAACA
LVRM1_0125_E02.b : GCTGTTTAAGGTCACCATGTCCAGGATTCTAAAGCTGAAAACACAGATGCAGGAAAAACA
THY01_0046_F09.b : GCTGTTTAAGGTCACCATGTCCAGGATTCTAAAGCTGAAAACACAGATGCAGGAAAAACA
OVRT1_0068_H11.b :
20110601C-013254 : GATCGCTGTTCTGAATGTGAAAAAACAAACCCAAAAGGGAAACTCAAAGAAAATTGTGAA
---------+---------+---------+---------+---------+---------+ 1076
OVRM1_0071_G01.b :
TCH01_0006_F04.b : GATCGCTGTTCTGAATGTGAAAAAACAAACCCAAAAGGGAAACTCAAAGAAAATTGTGAA
TES01_0063_B12.b : GATCGCTGTTCTGAATGTGAAAAAACAAACCCAAAAGGGAAACTCAAAGAAAATTGTGAA
LVRM1_0125_E02.b : GATCGCTGTTCTGAATGTGAAAAAACAAACCCAAAAGGGAAACTCAAAGAAAATTGTGAA
THY01_0046_F09.b : GATCGCTGTTCTGAATGTGAAAAAACAAACCCAAAAGGGAAACTCAAAGAAAATTGTGAA
OVRT1_0068_H11.b : nntttttnn
20110601C-013254 : AATGGAGCAGGAACTGCACGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAGCAGCA
---------+---------+---------+---------+---------+---------+ 1136
OVRM1_0071_G01.b :
TCH01_0006_F04.b : AATGGAGCAGGAACTGCACGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAGCAGCA
TES01_0063_B12.b : AATGGAGCAGGAACTGCACGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAGCAGCA
LVRM1_0125_E02.b : AATGGAGCAGGAACTGCACGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAGCAGCA
THY01_0046_F09.b : AATGGAGCAGGAACTGCACGATTTACAGTCCCAGCTGTGTGCAGAGCAGGCCCAGCAGCA
OVRT1_0068_H11.b : nnttttccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013254 : GGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCACCTGCAGGGTTT
---------+---------+---------+---------+---------+---------+ 1196
OVRM1_0071_G01.b :
TCH01_0006_F04.b : GGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCACCTGCAGGGTTT
TES01_0063_B12.b : GGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCACCTGCAGGGTTT
LVRM1_0125_E02.b : GGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCACCTGCAGGGTTT
THY01_0046_F09.b : GGCCAGAGTGGAGCAGCTGGAGAAGACTTTCCAGGAAGAGCAGCAGCACCTGCAGGGTTT
OVRT1_0068_H11.b : xxxxxxxxxxxxxxxtccagagtttctccagaacccccacagtggtggCCTGAAGGGTTT
20110601C-013254 : GGAGAAAGAGCAAGGAGAAGAGGACCTGAAGCAACAGCTGGCCCAGGCCCTGCAGGAGCA
---------+---------+---------+---------+---------+---------+ 1256
OVRM1_0071_G01.b :
TCH01_0006_F04.b : TGGAGAAGAGCCAGGAAAGAAGGACCTGAAGCAACAGCTtgccccaggccttgcaggaac
TES01_0063_B12.b : GGAGAAAGAGCAAGGAGAAGAGGACCTGAAGCAACAGCTGGCCCAAGCCCTGCAGGAGCA
LVRM1_0125_E02.b : GGAGAAAGAGCAAGGAGAAGAGGACCTGAAGCAACAGCTGGCCCAGGCCCTGCAGGAGCA
THY01_0046_F09.b : GGAGAAAGAGCAAGGAGAAGAGGACCTGAAGCAACAGCTGGCCCAGGCCCTGCAGGAGCA
OVRT1_0068_H11.b : GGAGAAAGAGCAAGGAGAAGAGGACCTGAAGCAACAGCTGGCCCAGGCCCTGCAGGAGCA
20110601C-013254 : TCGGGCTCTGATGGAAGAGCTAAACCGCAGCAGGAAGGACTTTGAAGCAATCATTCAAGC
---------+---------+---------+---------+---------+---------+ 1316
OVRM1_0071_G01.b :
TCH01_0006_F04.b : atcgggctctgatggaagagctaaaccgcgcagggaagactttgtagcaatctttcagcc
TES01_0063_B12.b : TCGGGCTCTGATGGAAGAGCTAAACCGCAGCAGGAAAGACTTTGAAGCAATCATTCAAGC
LVRM1_0125_E02.b : TCGGGCTCTGATGGAAGAGCTAAACCGCAGCAGGAAGGACTTTGAAGCAATCATTCAAGC
THY01_0046_F09.b : TCGGGCTCTGATGGAAGAGCTAAACCGCAGCAGGAAGGACTTTGAAGCAATCATTCAAGC
OVRT1_0068_H11.b : TCGGGCTCTGATGGAAGAGCTAAACCGCAGCAGGAAGGACTTTGAAGCAATCATTCAAGC
20110601C-013254 : CAAGAACAAAGAGCTGGAGCAGACCAAGGAAGAGAA*GGAGAAGGTGCAAGCACAGAAGG
---------+---------+---------+---------+---------+---------+ 1375
OVRM1_0071_G01.b :
TCH01_0006_F04.b : cagaaccaaaagctgggacaaaccaggaaganaaggaaaagtggcagccccaagggagga
TES01_0063_B12.b : AAAGACCAAAGAACTGGAACATACCAAGGAAataaggaaaaggtgcaacccaaaaagagg
LVRM1_0125_E02.b : CAAGAACAAAGAGCTGGAGCAGACCAAGGAAGAGAANGGAGAAGGTGCA*GCACAGAAGG
THY01_0046_F09.b : CAAGAACAAAGAGCTGGAGCAGACCAAGGAAGAGAA*GGAGAAGGTGCAAGCACAGAAGG
OVRT1_0068_H11.b : CAAGAACAAAGAGCTGGAGCAGACCAAGGAAGAGAA*GGAGAAGGTGCAAGCACAGAAGG
20110601C-013254 : AGGAAGTTCTTAGCCACATGA*ATGACGTGCTAGAAAACGAGCTTCAGTGTATTATTT*G
---------+---------+---------+---------+---------+---------+ 1433
OVRM1_0071_G01.b :
TCH01_0006_F04.b : agtcctaccccctgaatgactgctaaaaaccagcctcagggattattgctcaaatactcc
TES01_0063_B12.b : aagttcttaccccactgatgaactgcctataaaacaaccttcatggaatatttggctcaa
LVRM1_0125_E02.b : AGGAAGTTCTTAGCCACATGA*ATGACGTGCTAGAAAACGAGCTTCAGTGTATTATTT*G
THY01_0046_F09.b : AGGAAGTTCTTAGCCACATGAAATGACGTGCTAGAAAACGAGCTTCAGTGTATTATTTTG
OVRT1_0068_H11.b : AGGAAGTTCTTAGCCACATGA*ATGACGTGCTAGAAAACGAGCTTCAGTGTATTATTT*G
20110601C-013254 : CTCAGAATACTTCATTGAGGCTGTCACCTTGAACTGTGCCCATAGTTTCTGCTCCTTCTG
---------+---------+---------+---------+---------+---------+ 1493
OVRM1_0071_G01.b :
TCH01_0006_F04.b : tggaggctgccccttgaaggggccaaagttcggcccctccgaccagaagggaaaacccaa
TES01_0063_B12.b : aaacttcatttgaggtgtcccctttgactgggccccaaattttccgcccccccggtatca
LVRM1_0125_E02.b : CTCAGAATACTTCATTGAGGCTGTCACCTTGAACTGTGCCCATA
THY01_0046_F09.b : CTCAAAATACTTCATTGAGGCTGTTACCTTGAACTGTGCCCATAGTTTCTGCTCCTTCTG
OVRT1_0068_H11.b : CTCAGAATACTTCATTGAGGCTGTCACCTTGAACTGTGCCCATAGTTTCTGCTCCTTCTG
20110601C-013254 : TATCAATGAGTGGATGAAGCGGAAGGTAGAATGCCCCATTTGTCGGAAGGACATCAAGTC
---------+---------+---------+---------+---------+---------+ 1553
OVRM1_0071_G01.b :
TCH01_0006_F04.b : ggtaaagcccccttttccgaaggactaagtccaaaacccccgggn
TES01_0063_B12.b : atgaagggagaaacccaaaaggaaaatcccccttttgtcgaaagaaatcaaattccaaaa
LVRM1_0125_E02.b :
THY01_0046_F09.b : TATCAATGAGTtggatgaaacggaaggtaaaaatgccccattttgtcggaaggacattca
OVRT1_0068_H11.b : TATCAATGAGTGGATGAAGCGGAAGGTAGAATGCCCCATTTGTCGGAAGGACATCAAGTC
20110601C-013254 : CAAAACACACTCCCTGGTTCTGGACAATTGCATTAATAAGATGGTAGATAATCTGAGCTC
---------+---------+---------+---------+---------+---------+ 1613
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : aaacccccctggttttggaaattgtctttaaaaaaaggggaaaaaatctaaccccaaaag
LVRM1_0125_E02.b :
THY01_0046_F09.b : gttcaaaaacaccctcccctggtttctggaacaatttgcttaaataaaaaagggaaaaaa
OVRT1_0068_H11.b : CAAAACACACTCCCTGGTTCTGGACAATTGCATTAATAAGATGGTAGATAATCTGAGCTC
20110601C-013254 : AGAAGTGAAAGAACGACGAGTTGTTCTCATCAAGGAACGAAAAGGTGAGTGGGTCTGAAC
---------+---------+---------+---------+---------+---------+ 1673
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : gaaaaaaaacaaaaattttttccttttcggggaaaaaaacccaaaaaaagtttttataaa
LVRM1_0125_E02.b :
THY01_0046_F09.b : aaatttaaactccgaaatggaaaaaaaccaacaaatttgtttccccttaaaggaaaaaaa
OVRT1_0068_H11.b : AGAAGTGAAAGAACGACGAGTTGTTCTCATCAAGGAACGAAAAGGTGAGTGGGTCTGAAC
20110601C-013254 : AAGAGGTGAGTCCCCTCAACCAAAGGCTTAGGATGATTTTTTTGGATGGAGAGGAGTCAA
---------+---------+---------+---------+---------+---------+ 1733
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : aacggtcccccagggttttttaaaaaacccccccccttgggatttttggaaggcccaaaa
LVRM1_0125_E02.b :
THY01_0046_F09.b : aaacccaaaaaaactggtttttgaaaaaaccgggcccccaaggggtttttttaaaaaaat
OVRT1_0068_H11.b : AAGAGGTGAGTCCCCTCAACCAAAGGCTTAGGATGATTTTTTTGGATGGAGAGGAGTCAA
20110601C-013254 : CATAAATGATTCTTTTGTTTTGTTTTGTTTAAAGATTCTTGAGCTAAGTGAGAATTGGAA
---------+---------+---------+---------+---------+---------+ 1793
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : atttctttggggaaggttttgggcccccccttaaaacggtgggaaaacaaccctttaaaa
LVRM1_0125_E02.b :
THY01_0046_F09.b : tgcccagggaaggggggaatttttgggatgggccccaaaagggtttttttttgggggaaa
OVRT1_0068_H11.b : CATAAATGATTCTTTTGTTTTGTTTTGTTTAAAGATTCTTGAGCTAAGTGAGAATTGGAA
20110601C-013254 : GATATGGGGGAAAGTAAAGCAAGTTAAAGATAGTGAATGTGTAAGAGTTGAGGTAGAATA
---------+---------+---------+---------+---------+---------+ 1853
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : tatctccctggaagcccttgtttgtgaaccctcgtctcccctttgttaagagacttattt
LVRM1_0125_E02.b :
THY01_0046_F09.b : gggttttttgggcccccccccgaaaggaaaaagggggggggaaaaaaaaaaaacccccaa
OVRT1_0068_H11.b : GATATGGGGGAAAGTAAAGCAAGTTAAAGATAGTGAATGTGTAAGAGTTGAGGTAGAATA
20110601C-013254 : AACTAATATTTGAGCAGCAGGGAATGGTATGGCTTGGGTGTACATGTCTTGGTTGCTGGC
---------+---------+---------+---------+---------+---------+ 1913
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b : tccaccaccctcttcgcgtggttaaaactccttccttccgcgtgagggt
LVRM1_0125_E02.b :
THY01_0046_F09.b : aaaaaaaaaaatctcccccccccccgtgggccaccccccttcctggtggttggggcgcac
OVRT1_0068_H11.b : AACTAATATTTGAGCAGCAGGGAATGGTATGGCTTGGGTGTACATGTCTTGGTTGCTGGC
20110601C-013254 : ATAAAGATGTGATTAGAAAACAGTTTGCTGTGCTGGTCACTAGATGGTGCTGTTTGTCAA
---------+---------+---------+---------+---------+---------+ 1973
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b : accccccccctttttgtgtccccccaccattat
OVRT1_0068_H11.b : ATAAAGATGTGATTAGAAAACAGTTTGCTGTGCTGGTCACTAGATGGTGCTGTTTGTCAA
20110601C-013254 : GACAGTTTAGTTGCTGTCCATGTGTCATTAAAAACCTTGGGTGTATAATAAATTATAAAT
---------+---------+---------+---------+---------+---------+ 2033
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : GACAGTTTAGTTGCTGTCCATGTGTCATTAAAAACCTTGGGTGTATAATAAATTATAAAT
20110601C-013254 : AGGATGTGTA..................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : AGGATGTGTAcgcgttaaagactcacaccttggagaaatgccagaaatgtgaggaaaact
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : tatttaagattacagttagaatcacagcctggataaccaattaggcctaatattatcaaa
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : aagaatcagttaatcctactggggtactttgacatcccataaatttcccacaggttccca
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : ggcaaaatttggaaaaaaatttagggaaggagcggtgaatttcttaagaacccatttggg
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : gaaggacctccgcccttttaacaaagggggcccccatctgggccccgcccggtagaggtt
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : gcgaaaccccttccataaatattaatttcccgtggaaaaaaaggtgtcccgtggaaaaac
20110601C-013254 : ............................................................
---------+---------+---------+---------+---------+---------+ 2043
OVRM1_0071_G01.b :
TCH01_0006_F04.b :
TES01_0063_B12.b :
LVRM1_0125_E02.b :
THY01_0046_F09.b :
OVRT1_0068_H11.b : aagaaacttgaataaaagtgttttttggggggaaaaatt
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