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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013337

Length: 1,096

Sequence [FASTA format sequence]
GTTTCCTGTT GTCAGGTAAT GCCAGCCTCA ACCCTCTGGA CCAATCGCCC CCATCAGACT
GTGCTCCTCA ATTGTATACC AGGATGCTCC GAGAGCAGTA GAAGCCTGAA CCAGAGCCTC
TAACCCTGTC CCCCCAATAA TGGGGCCCCC ATTGAGTCAT CTGCTGGCTG GCCTGTGTGT
GTGGGTGGCC TTGGGCTGGG TAGGAGGCTC TGCTCCCAAC CTGGGCCCTG CTGAGCAGGA
GCAGAACCAT TACCTGGCCC AGCTGTTTGG CCTCTATGGG GAGAACGGGA CGCTGACTGC
AGGGGGCCTG GCACGGCTTC TTCACAGCCT GGGACTAGGC CGAGTTCAAG CCCTTCGCCT
GGGACACCAC GGGCCTCCCG CTGGTCGGGC TACACCCCCA GCTGGAGACA ATTCCACCCA
CAGGCCACAG GACCCTGAGC TGAGTGTGGA TGTCTGGGCA GGGCTGCCTC TGGATCCCTC
AGGGTGGGGT GACCTGGAAG AGCCAGAGGC CCCAGCACCA CCCCATGGGC CGGCCCCCTC
AGGCCTGGGC CTCTTTCACA GGCTTCTGCT GCTGGACCAT TCACTAGCTG ACCATCTGAA
TGAGGATTGT CTGAATGGCT CCCAGCTGCT GGTCAATTTT GGCCTGAGCC CTGCTGCTCC
TCTGACCCCT CGTCAGTTTG CTCTGCTGTG TCCAGCCCTG CTGTATCAGA TTGACAGCCG
TGTCTGCATC CGGGCCCCAG CCCCAACGCC TCCGGGGGAT CTACTATCTG CCCTGGTCCA
CAGTGCCCTG GCAGTCCTGC TGCTCAGCCT TCCTGCTCCC CTCTCCCTGC TCTTGCTGCG
GCTCCTGGGA CCTCGTCTGT TGCAGCCCCT GCTGGGCTTC CTGGGTGCCC TGGCCGTGGG
CACCCTTTGT GGGGATGCAC TGCTACACCT ACTGCCACAT GCGCAAGGAG GGCAGCACAG
TGGATCTGGC GCACGGCCAG AGGAGGACCT GGGACCAGGA CTGTCGGTGC TTGGTGGTCT
CTTCCTGCTC TTCGTCCTGG AGAACATGCT AGGGCTTTTG CGGCGATGAG GGCTCCGGCC
ACAATGCTGC CGGCAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A5zinc transporter ZIP5 [Homo sapiens]. 3087e-84O
Contig/Assembly ProteinSLC39A5zinc transporter ZIP5 [Homo sapiens]. 3087e-84O
Contig/Assembly ProteinSLC39A10zinc transporter ZIP10 precursor [Homo sapiens]. 50.82e-06
Contig/Assembly ProteinSLC39A10zinc transporter ZIP10 precursor [Homo sapiens]. 50.82e-06


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSlc39a5zinc transporter ZIP5 precursor [Mus musculus]. 2901e-78O
Contig/Assembly ProteinSlc39a5zinc transporter ZIP5 precursor [Mus musculus]. 2901e-78O
Contig/Assembly ProteinSlc39a5zinc transporter ZIP5 precursor [Mus musculus]. 2901e-78O
Contig/Assembly ProteinSlc39a10zinc transporter ZIP10 precursor [Mus musculus]. 61.61e-09


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC481108PREDICTED: similar to solute carrier family 39 (metal ion transporter), member 5 [Canis familiaris]. 2732e-73O
Contig/Assembly ProteinLOC478850PREDICTED: similar to solute carrier family 39 (zinc transporter), member 10 [Canis familiaris]. 52.86e-07O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A5PREDICTED: solute carrier family 39 (metal ion transporter), member 5 [Bos taurus]. 3172e-86O
Contig/Assembly ProteinSLC39A5PREDICTED: solute carrier family 39 (metal ion transporter), member 5 [Bos taurus]. 3172e-86O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A5PREDICTED: zinc transporter ZIP5 isoform 2 [Sus scrofa]. 3431e-94O
Contig/Assembly ProteinSLC39A5PREDICTED: zinc transporter ZIP5 isoform 1 [Sus scrofa]. 3431e-94O


Assembly Members: 10      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010005A09ITT01_0005_A09.bBW976410 
ITT010036G10ITT01_0036_G10.bBW979278 
KDN010022B03KDN01_0022_B03.bFS672819 
KDN010043G09KDN01_0043_G09.bFS674229 
LVRM10010D10LVRM1_0010_D10.bBP139258 
LVRM10075C02LVRM1_0075_C02.bBP138487 
LVRM10152D01LVRM1_0152_D01.bBP450603 
LVRM10169G10LVRM1_0169_G10.bCJ004604 AK233540
LVRM10177D08LVRM1_0177_D08.bBW963174 
LVRM10206H06LVRM1_0206_H06.bCJ007548 

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
144A020.222MNGAG/E
G430.778GGG/G
167G430.778MNGCT/A
T020.222TCT/S
405A400.444BNGAA/E
G050.556GGA/G


Alignment:      TOP

20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0169_G10.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0022_B03.b : nnnnccccgctgt
LVRM1_0075_C02.b : agttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0152_D01.b : cagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0005_A09.b : nnnggatgaacaxxxxxxxxxxxxxxxxxxxxx
KDN01_0043_G09.b :
LVRM1_0206_H06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0177_D08.b : ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctt
ITT01_0036_G10.b : nnnaagatgaacaxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0010_D10.b :
20110601C-013337 : ......GTTTCCTGTTGTCAGGTAATGCCAGCCTCAACCCTCTGGACCAATCGCCCCCAT
---------+---------+---------+---------+---------+---------+ 54
LVRM1_0169_G10.b : xxxxxxGTTTCCTGTTGTCAGGTAATGCCAGCCTCAACCCTCTGGACCAATCGCCCCCAT
KDN01_0022_B03.b : ggctctgggtttctgttgtcGGTAATGCCAGCCTCAACCCTCTGGACCAATCGCCCCCAT
LVRM1_0075_C02.b : xxxxxxxxxxxxxxxxxxxxxxxxxTGCCAGCCTCAACCCTCTGGACCAATCGCTCCCAT
LVRM1_0152_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxTGCCAGCCTCAACCCTCTGGACCAATCGCCCCCAT
ITT01_0005_A09.b : xxxxxxxxxxxxxxxxxxxxxxxxxTGCCAGCCTCAACCCTCTGGACCAATCGCCCCCAT
KDN01_0043_G09.b : nnnnntttccgcgttggctctgaatgccgcctcACCCTCTGGAC*AATCGCCCCCAT
LVRM1_0206_H06.b : cttcctgtttcctgttgtcaggtaatgccagcctcaaccctctggaccaatcgcccccat
LVRM1_0177_D08.b : gtccggcctgcctgcctaccccccactgctggaaccgagaaggctgtgtccccttcctct
ITT01_0036_G10.b : xxxxxxxxxxxxxxxxccccccccactgctggaaccgagaaggctgtgtccccttcctct
LVRM1_0010_D10.b :
20110601C-013337 : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
---------+---------+---------+---------+---------+---------+ 114
LVRM1_0169_G10.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
KDN01_0022_B03.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
LVRM1_0075_C02.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
LVRM1_0152_D01.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
ITT01_0005_A09.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
KDN01_0043_G09.b : CAGACTGTGCTCCTCAATTGTATACCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
LVRM1_0206_H06.b : cagactgtgctccccaattgtataCCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
LVRM1_0177_D08.b : gggctcccttcctgtttcctgttgtCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
ITT01_0036_G10.b : gggctcccttcctgtttcctgttgtCAGGATGCTCCGAGAGCAGTAGAAGCCTGAACCAG
LVRM1_0010_D10.b :
20110601C-013337 : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
---------+---------+---------+---------+---------+---------+ 174
LVRM1_0169_G10.b : AGCCTCTAACCCTGTCCCCCCAATAATGGAGCCCCCATTGAGTCATCTGCTGTCTGGCCT
KDN01_0022_B03.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
LVRM1_0075_C02.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
LVRM1_0152_D01.b : AGCCTCTAACCCTGTCCCCCCAATAATGGAGCCCCCATTGAGTCATCTGCTGTCTGGCCT
ITT01_0005_A09.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
KDN01_0043_G09.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
LVRM1_0206_H06.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
LVRM1_0177_D08.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
ITT01_0036_G10.b : AGCCTCTAACCCTGTCCCCCCAATAATGGGGCCCCCATTGAGTCATCTGCTGGCTGGCCT
LVRM1_0010_D10.b :
20110601C-013337 : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
---------+---------+---------+---------+---------+---------+ 234
LVRM1_0169_G10.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
KDN01_0022_B03.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
LVRM1_0075_C02.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
LVRM1_0152_D01.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
ITT01_0005_A09.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
KDN01_0043_G09.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
LVRM1_0206_H06.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
LVRM1_0177_D08.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
ITT01_0036_G10.b : GTGTGTGTGGGTGGCCTTGGGCTGGGTAGGAGGCTCTGCTCCCAACCTGGGCCCTGCTGA
LVRM1_0010_D10.b :
20110601C-013337 : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
---------+---------+---------+---------+---------+---------+ 294
LVRM1_0169_G10.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
KDN01_0022_B03.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
LVRM1_0075_C02.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGCGAGAACGGGACGCT
LVRM1_0152_D01.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
ITT01_0005_A09.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
KDN01_0043_G09.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
LVRM1_0206_H06.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
LVRM1_0177_D08.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
ITT01_0036_G10.b : GCAGGAGCAGAACCATTACCTGGCCCAGCTGTTTGGCCTCTATGGGGAGAACGGGACGCT
LVRM1_0010_D10.b :
20110601C-013337 : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
---------+---------+---------+---------+---------+---------+ 354
LVRM1_0169_G10.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
KDN01_0022_B03.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
LVRM1_0075_C02.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
LVRM1_0152_D01.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
ITT01_0005_A09.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
KDN01_0043_G09.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
LVRM1_0206_H06.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
LVRM1_0177_D08.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
ITT01_0036_G10.b : GACTGCAGGGGGCCTGGCACGGCTTCTTCACAGCCTGGGACTAGGCCGAGTTCAAGCCCT
LVRM1_0010_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013337 : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
---------+---------+---------+---------+---------+---------+ 414
LVRM1_0169_G10.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
KDN01_0022_B03.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGAAGACAATTC
LVRM1_0075_C02.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
LVRM1_0152_D01.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
ITT01_0005_A09.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGAAGACAATTC
KDN01_0043_G09.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGAAGACAATTC
LVRM1_0206_H06.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
LVRM1_0177_D08.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGGAGACAATTC
ITT01_0036_G10.b : TCGCCTGGGACACCACGGGCCTCCCGCTGGTCGGGCTACACCCCCAGCTGAAGACAATTC
LVRM1_0010_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCACCCCCAGCTGGAGACAATTC
20110601C-013337 : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
---------+---------+---------+---------+---------+---------+ 474
LVRM1_0169_G10.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
KDN01_0022_B03.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
LVRM1_0075_C02.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
LVRM1_0152_D01.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
ITT01_0005_A09.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
KDN01_0043_G09.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
LVRM1_0206_H06.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
LVRM1_0177_D08.b : CACCCACAGGCCACAGGACCCTGAGCTGAATGTGGATGTCTGGGCAGGGCTGCCTCTGGA
ITT01_0036_G10.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
LVRM1_0010_D10.b : CACCCACAGGCCACAGGACCCTGAGCTGAGTGTGGATGTCTGGGCAGGGCTGCCTCTGGA
20110601C-013337 : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
---------+---------+---------+---------+---------+---------+ 534
LVRM1_0169_G10.b : TCCCTCCAGGTGGGGgtgactgtagataccagaagaccgtgaccacccgaggggccggac
KDN01_0022_B03.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
LVRM1_0075_C02.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGN
LVRM1_0152_D01.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
ITT01_0005_A09.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
KDN01_0043_G09.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
LVRM1_0206_H06.b : TCCCTCAGGGTGGGGTGACCTGNAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
LVRM1_0177_D08.b : TCCCTCAAGGTGGGGTGACCTGCAAGAGCCCGAGGCCCCgcaccagcacatgggccggcg
ITT01_0036_G10.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
LVRM1_0010_D10.b : TCCCTCAGGGTGGGGTGACCTGGAAGAGCCAGAGGCCCCAGCACCACCCCATGGGCCGGC
20110601C-013337 : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
---------+---------+---------+---------+---------+---------+ 594
LVRM1_0169_G10.b : ccgttaaagcccgggaccatatcaagcccgttactgctggacaatacttacgcgtacgtt
KDN01_0022_B03.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
LVRM1_0075_C02.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
LVRM1_0152_D01.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
ITT01_0005_A09.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
KDN01_0043_G09.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
LVRM1_0206_H06.b : CCCCTCAAGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
LVRM1_0177_D08.b : cctcgagcatggggctccttcacgagcagcgagccgccggaacagtcaagaacggaacct
ITT01_0036_G10.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
LVRM1_0010_D10.b : CCCCTCAGGCCTGGGCCTCTTTCACAGGCTTCTGCTGCTGGACCATTCACTAGCTGACCA
20110601C-013337 : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
---------+---------+---------+---------+---------+---------+ 654
LVRM1_0169_G10.b : caggcgtcaggattgatgtgattgggtgcacgttgacaggccatgttcagcaagggacac
KDN01_0022_B03.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
LVRM1_0075_C02.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCCATTTTGGCCTGAGCCCTGC
LVRM1_0152_D01.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
ITT01_0005_A09.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
KDN01_0043_G09.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
LVRM1_0206_H06.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAACTGCTGGTCCATTTTGGCCTGGAGCCTGC
LVRM1_0177_D08.b : taaaaggagcatgtacgaatggtccccacggggcgaccaaacgggttgtaccctgctctc
ITT01_0036_G10.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
LVRM1_0010_D10.b : TCTGAATGAGGATTGTCTGAATGGCTCCCAGCTGCTGGTCAATTTTGGCCTGAGCCCTGC
20110601C-013337 : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
---------+---------+---------+---------+---------+---------+ 714
LVRM1_0169_G10.b : ctggcgggctagtttaaagtgaacaggatactctgttcaccggcgcgtatagattctcgc
KDN01_0022_B03.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
LVRM1_0075_C02.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
LVRM1_0152_D01.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
ITT01_0005_A09.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
KDN01_0043_G09.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
LVRM1_0206_H06.b : TGCTCCTCTGACCCCTCGTCAATTTGCTCTGCTGTGTCCAGCCCTGCTGTTTCAAATTGA
LVRM1_0177_D08.b : ctttcggagctagcgagatgtactgtaggtcgcggcccccgtaccttttccgactcatgc
ITT01_0036_G10.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
LVRM1_0010_D10.b : TGCTCCTCTGACCCCTCGTCAGTTTGCTCTGCTGTGTCCAGCCCTGCTGTATCAGATTGA
20110601C-013337 : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGATCTACTATCTGCCCT
---------+---------+---------+---------+---------+---------+ 774
LVRM1_0169_G10.b : cgccagtagtccacctgcgaattgatctactgaccgctagcataagttaggt
KDN01_0022_B03.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGATCTACTATCTGCCCT
LVRM1_0075_C02.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCCACGCCNTCGGGGGA
LVRM1_0152_D01.b : CAGGCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGA
ITT01_0005_A09.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGATCTACTATCTGCCCT
KDN01_0043_G09.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGATCTACTATCTGCCCT
LVRM1_0206_H06.b : CAGCCtgtctgcttcggggccccacccca
LVRM1_0177_D08.b : ccttttccgnccgagcccc
ITT01_0036_G10.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGGGATCTACTATCTGCCCT
LVRM1_0010_D10.b : CAGCCGTGTCTGCATCCGGGCCCCAGCCCCAACGCCTCCGGGAGATCTACTATCTGCCCT
20110601C-013337 : GGTCCACAGTGCCCTGGCAGTCCTGCTGCTCAGCCTTCCTGCTCCCCTCTCCCTGCTCTT
---------+---------+---------+---------+---------+---------+ 834
LVRM1_0169_G10.b :
KDN01_0022_B03.b : GGTCCACAGTGCCCTGGCAGTCCTGCTGCTCAGCCTTCCTGCTCCCCTCTCCCTGCTCTT
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : GGTCCACAGTGCCCTGGCAGTCCTGCTGCTCAGCCTTCCTGCTCCCCTCTCCCTGCTCTT
KDN01_0043_G09.b : GGTCCACAGTGCCCTGGCAGTCCTGCTGCTCAGCCTTCCTACTCCCCTCTCCCTGCTCTT
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : GGTCCACAGTGCCCTGGCAGTCCTGCTGCCCAGCCTTCCTGCTCCCCTCTCCCTGCTCTT
LVRM1_0010_D10.b : GGTCCACAGTGCCCTGGCAGTCCTGCTGCTCAGCCTTCCTGCTCCCCTCTCCCTGCTCTT
20110601C-013337 : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
---------+---------+---------+---------+---------+---------+ 894
LVRM1_0169_G10.b :
KDN01_0022_B03.b : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
KDN01_0043_G09.b : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
LVRM1_0010_D10.b : GCTGCGGCTCCTGGGACCTCGTCTGTTGCAGCCCCTGCTGGGCTTCCTGGGTGCCCTGGC
20110601C-013337 : CGTGGGCACCCTTTGTGGGGATGCACTGCTACACCTACTGCCACATGCGCAAGGAGGGCA
---------+---------+---------+---------+---------+---------+ 954
LVRM1_0169_G10.b :
KDN01_0022_B03.b : CGTGGGCACCCTTTGTGGGGATGCACTGCTACACCTACTGGCACATGCGCAAGGAAGGCa
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : CGTGGGCACCCTTTGTGGGGATGCACTGCTACACCTACTGCCACATGCGCAAGGAGGGCA
KDN01_0043_G09.b : CGTGGGCACCCTTTGTGGGGATGCACTGCTACACCTACTGCCACATGCGCAAAGAGGGCA
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : CGTGGGCACCCCTTTTGGGGATGCACTGCTACACCTACTGCCACATGCGCAAGGAGGGCa
LVRM1_0010_D10.b : CGTGGGCACCCTTTGTGGGGATGCACTGCTACACCTACTGCCACATGCGCAAGGAGGGCA
20110601C-013337 : GCACAGTGGATCTGGCGCACGGCCAGAGGAGGACCTGGGACCAGGACTGTCGGTGCTTGG
---------+---------+---------+---------+---------+---------+ 1014
LVRM1_0169_G10.b :
KDN01_0022_B03.b : gcacagtggatctggcgcacgnncgnnagaagacctgggaccaggactgtcggtgcttgg
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : GCACAGTGGATCTGGCGCACGGCcagaagaagacctgggnacaggactgtcggtgcttgg
KDN01_0043_G09.b : GCACAGTGGATCTGGCGCACGGCCAGAAGAAGACCTGGGACaagactgtcggtgctggnt
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : acacagtggatctggcgcaccgccagaggaggaactggggacaggactgtccgtgcttgg
LVRM1_0010_D10.b : GCACAGTGGATCTGGCGCACGGCCAGAGGAGGACCTGGGACCAGGACTGTCGGTGCTTGG
20110601C-013337 : TGGTCTCTTCCTGCTCTTCGTCCTGGAGAACATGCTAGGGCTTTTGCGGCGATGAGGGCT
---------+---------+---------+---------+---------+---------+ 1074
LVRM1_0169_G10.b :
KDN01_0022_B03.b : tggtctcttcctgctcttcgtctgnagacatgctanngctttgcgccgtcaaggctcggc
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : tgggtctctcctgctnctcgtccntggagacatgctaggnctttttgcgcgtcnagggct
KDN01_0043_G09.b : ggtctctcctgctcttcgtcctggagacatgctaggcttttgcggcgtcaggctcgggcc
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : tggtccctcctgctcttcgtctggagaaatgctagggcttttggggcgtccagggctcgg
LVRM1_0010_D10.b : TGGTCTCTTCCTGCTCTTCGTCCTGGAGAACATGCTAGGGCTTTTGCGGCGATGAGGGCT
20110601C-013337 : CCGGCCACAATGCTGCCGGCAA......................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : caaaatgctgcgggcaaaaagaaagatctcagatctccaactggaaccaaagacggcact
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : cgggcaaaatgctgccggcaaaaaagaaagatctcaaatcttccaactggnaccnnnaga
KDN01_0043_G09.b : aaatgctgcgggcaaaaaagaaggatctcaaatctcaaactggaccagaggacgcactgg
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : ccaaaatgcgccggcaaaaaaaaaggatttaaatttcaacctggaccagagaagggcctg
LVRM1_0010_D10.b : CCGGCCACAATGCTGCCGGCAAataagaaggatctcagatctcccaactggacccagagg
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : ggatggctttcgccctaaaggaactcgaaacagggctcaggcccaggaaaagaaaacagc
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : ggcccttggattgcctttcgcccctaaagcccctccaanccagggcctaggccccaagga
KDN01_0043_G09.b : gatgccttcagccctaagcacctcaaaacaagggctcaggccaaggaaaggaaacagccc
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : gaaggcccttcgccctaagggacctcaaaacaggggtctgggcccaggaaaaggaaaaag
LVRM1_0010_D10.b : aggcactgggatggcccttcacccctacaagcccctcaaagccggggctcaaggcc
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : cccaaagcccggtcttctaggncacaggccaattccgtacagggacgggggccaatatca
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : aaggaaaacaacctcagaaacccggcccctcagggcaaaggccaattccgggaccaggga
KDN01_0043_G09.b : caaaacccggccttcaaggacaagcccaattcggtacaagcaggggggccaaatcatgga
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : ccccaaagccccggccctcggggcaagggccaatttgggtacggggacgggggaccaaaa
LVRM1_0010_D10.b :
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : tgatggcccctggaaagtctgcaaccctagaaatggaaaggtgccttctaaggtttccgg
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : gacggggcccaatttccaggaaggtccctggggaaaggttccaaccccgtgagaggggga
KDN01_0043_G09.b : gccctggggaagactgcaacccctgagaagggaaaggtccttctaaagtctcgggcctca
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b : aaatgaaggcccccgggaaagttgccc
LVRM1_0010_D10.b :
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : gccacaccaaaatttttttatccccaaaggtattaagtgccggggcccctcccttgtaac
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b : agggtgccttctaagggtcccggg
KDN01_0043_G09.b : ccccaaatctttcaaattcccaaagggatttatttccggaggctcttccggttttaaagg
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b :
LVRM1_0010_D10.b :
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : attgttctttaggggccggggggagagccccccccgctgggaggtctttttaatatcttt
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b :
KDN01_0043_G09.b : ggttttt
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b :
LVRM1_0010_D10.b :
20110601C-013337 : ............................................................
---------+---------+---------+---------+---------+---------+ 1096
LVRM1_0169_G10.b :
KDN01_0022_B03.b : tttc
LVRM1_0075_C02.b :
LVRM1_0152_D01.b :
ITT01_0005_A09.b :
KDN01_0043_G09.b :
LVRM1_0206_H06.b :
LVRM1_0177_D08.b :
ITT01_0036_G10.b :
LVRM1_0010_D10.b :