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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013408

Length: 909

Sequence:  [FASTA format sequence]
CCTTTCCTCT GGTCAGAAGT GGGGAGAAAG GGGACACAGG CAGGGGCCCG GCAGGACCCG
GTGATGACAG GCTGTCAGGC TCGCTGCAAG TGACCAGGCC CGCGGAACGA GGCATGGCGC
AGGCAGATGG GGCCCCCTGC CCCGGCACCG CCCCGAGCCA GCCCTGCGTC TTCAAGCTGG
TTCTCCTGGG CAGTGGCTCT GTGGGCAAGT CCAGCTTGGC TTTCCGGTAT GTGAAGAATG
ACTTCAAGAG CATCCTGCCG ACGGTGGGAT GTGCCTTCTT CACCAAGGTG GTGGATTTGG
GGGCTGCGTC TCTGAAGCTG GAGATCTGGG ACACGGCCGG CCAGGAGAAG TACCACAGCG
TCTGCCACCT CTACTTCAGG GGCGCCAATG CTGCGCTTGT GGTGTATGAC GTCACCAGGA
AGGATTCCTT CCTCAAGGCG CAGCAGTGGC TCAAGGACCT GGAAGAGGAG TTCCGCCTGG
GTGACGTGGT GGTGATGCTG GTTGGCAACA AGCTGGACCT TGGCAAGGAG CGGGAGGTGG
CCTTTGAGGA GGGGAAGGAG TTTGCCGAGA GCAAGGGGCT GCTATTCATG GAAACCTCGG
CCAAGCTGAA CCACCAGGTG ACTGAGGCCT TCGGCGCCAT TGCCCAGGAG CTTTGGCGCA
GAGAAGAGAG GAAGGAGGAC CAGCAGCAGC AGCAGAGAGA CGCACAGCTG GATCTGAACC
AGAGGCCCTC GGCGCAGGCC AGATGCTGCG CCCGCTAGAA GCAGCCTCTC CAGGAGGGGC
CGTGGGGAGG GAGGCCCCAA GCCCGGGCCC TGCCCGCTCG TGTTGACCAG ATACTTATCC
CGATTCCCCG TCGATGCTGG CCTGTTTCTG ANTCCCGGTG GCTCTTGGAG CTTGCATCCC
CCTGAATTA

SNP mapping information

SNP ID	Rel.	Chr.	Location (cM)

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Assembly Overview:      TOP

Change score limit to  

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BLAST on RefSeq (Human):      TOP

		Locus	Definition	Score	E value	FL
		RAB17	ras-related protein Rab-17 [Homo sapiens].	271	8e-73	O
		RAB5C	ras-related protein Rab-5C isoform a [Homo sapiens].	141	7e-34	O
		RAB5C	ras-related protein Rab-5C isoform b [Homo sapiens].	141	7e-34	O
		RAB5A	ras-related protein Rab-5A [Homo sapiens].	140	2e-33	O
		RAB5B	ras-related protein Rab-5B [Homo sapiens].	135	7e-32	O
		RAB26	ras-related protein Rab-26 [Homo sapiens].	125	7e-29
		RAB31	ras-related protein Rab-31 [Homo sapiens].	124	1e-28	O
		RAB2A	ras-related protein Rab-2A isoform a [Homo sapiens].	124	1e-28	O
		RAB37	ras-related protein Rab-37 isoform 3 [Homo sapiens].	123	3e-28	O
		RAB2A	ras-related protein Rab-2A isoform b [Homo sapiens].	122	3e-28	O

BLAST on RefSeq (Mouse):      TOP

		Locus	Definition	Score	E value	FL
		Rab17	ras-related protein Rab-17 [Mus musculus].	258	4e-69	O
		Rab17	ras-related protein Rab-17 [Mus musculus].	258	4e-69	O
		Rab5c	ras-related protein Rab-5C [Mus musculus].	141	6e-34	O
		Rab5a	ras-related protein Rab-5A [Mus musculus].	140	1e-33	O
		Rab5b	ras-related protein Rab-5B isoform 1 [Mus musculus].	135	6e-32	O
		Gm13991	PREDICTED: ras-related protein Rab-5B [Mus musculus].	135	6e-32
		Gm13991	PREDICTED: ras-related protein Rab-5B [Mus musculus].	135	6e-32
		Rab26	ras-related protein Rab-26 [Mus musculus].	128	5e-30
		Rab2a	ras-related protein Rab-2A [Mus musculus].	124	1e-28	O
		Rab37	ras-related protein Rab-37 isoform 2 [Mus musculus].	124	1e-28	O

BLAST on RefSeq (Dog):      TOP

		Locus	Definition	Score	E value	FL
		LOC607120	PREDICTED: similar to RAB17, member RAS oncogene family [Canis familiaris].	280	1e-75	O
		RAB5C	ras-related protein Rab-5C [Canis lupus familiaris].	141	7e-34	O
		RAB5A	ras-related protein Rab-5A [Canis lupus familiaris].	140	2e-33	O
		LOC474394	PREDICTED: similar to RAB5B, member RAS oncogene family isoform 1 [Canis familiaris].	135	7e-32	O
		LOC474394	PREDICTED: similar to RAB5B, member RAS oncogene family isoform 3 [Canis familiaris].	131	8e-31	O
		LOC610958	PREDICTED: similar to RAB26, member RAS oncogene family [Canis familiaris].	125	4e-29	O
		RAB2A	ras-related protein Rab-2A [Canis lupus familiaris].	124	1e-28	O
		LOC608485	PREDICTED: similar to Ras-related protein Rab-31 (Rab-22B) [Canis familiaris].	123	3e-28	O
		LOC480883	PREDICTED: similar to RAB2, member RAS oncogene family [Canis familiaris].	123	3e-28
		LOC483298	PREDICTED: similar to Ras-related protein Rab-37 [Canis familiaris].	123	3e-28	O

BLAST on RefSeq (Cattle):      TOP

		Locus	Definition	Score	E value	FL
		LOC616956	PREDICTED: RAB17, member RAS oncogene family-like [Bos taurus].	182	4e-50
		RAB5C	ras-related protein Rab-5C [Bos taurus].	142	3e-34	O
		RAB5A	ras-related protein Rab-5A [Bos taurus].	140	2e-33	O
		RAB5B	PREDICTED: RAB5B, member RAS oncogene family-like [Bos taurus].	135	6e-32	O
		RAB5B	ras-related protein Rab-5B [Bos taurus].	135	6e-32	O
		RAB26	ras-related protein Rab-26 [Bos taurus].	128	8e-30
		RAB37	PREDICTED: RAB37, member RAS oncogene family-like [Bos taurus].	123	3e-28	O
		RAB31	ras-related protein Rab-31 [Bos taurus].	123	3e-28	O
		RAB37	ras-related protein Rab-37 [Bos taurus].	123	3e-28	O
		RAB25	ras-related protein Rab-25 [Bos taurus].	123	3e-28	O

BLAST on RefSeq (Pig):      TOP

		Locus	Definition	Score	E value	FL
		RAB17	RAB17, member RAS oncogene family [Sus scrofa].	341	3e-94	O
		LOC100621966	PREDICTED: ras-related protein Rab-17-like [Sus scrofa].	333	8e-92	O
		LOC100523862	PREDICTED: ras-related protein Rab-5C-like [Sus scrofa].	142	2e-34	O
		RAB5A	ras-related protein Rab-5A [Sus scrofa].	140	1e-33	O
		LOC100625381	PREDICTED: ras-related protein Rab-5B-like [Sus scrofa].	134	7e-32	O
		LOC100516791	PREDICTED: ras-related protein Rab-26-like [Sus scrofa].	125	2e-29
		RAB2A	PREDICTED: ras-related protein Rab-2A [Sus scrofa].	124	7e-29	O
		LOC100513620	PREDICTED: ras-related protein Rab-37-like isoform 3 [Sus scrofa].	123	1e-28	O
		RAB14	ras-related protein Rab-14 [Sus scrofa].	122	3e-28	O
		LOC100513620	PREDICTED: ras-related protein Rab-37-like isoform 1 [Sus scrofa].	122	2e-28	O

Alignment:      TOP

20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
CLNT1_0145_B01.b : nnnnnccgtcgctgacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0167_A10.b :                                   gtcxxxxxxxxxxxxxxxxxxxxxxx
THY01_0046_E07.b :       cttttgggggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0020_H10.b :     ggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0182_F07.b :                                                      ttgtcxx
LVRM1_0061_A10.b :                                               cxxxxxxxxxxxxx
LVRM1_0115_C06.b :             nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxx


20110601C-013408 : ...............CCTTTCCTCTGGTCAGAAGTGGGGAGAAAGGGGACACAGGCAGGG
                   ---------+---------+---------+---------+---------+---------+ 45
CLNT1_0145_B01.b : xxxxxxxxxxxxxxxCCTTTCCTCTGGTCAGAAGTGGGGAGAAAGGGGACACAGGCAGGG
LVRM1_0167_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAGTGGGGAGAAAGGGGACACAGGCAGGG
THY01_0046_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAGTGGGGAGAAAGGGGACACAGGCAGGG
LVR01_0020_H10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAGTGGGGAGAAAGGGGACACAGGCAGGG
LVRM1_0182_F07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGGCAGGG
LVRM1_0061_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGGCAGGG
LVRM1_0115_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGGCAGGG


20110601C-013408 : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
                   ---------+---------+---------+---------+---------+---------+ 100
CLNT1_0145_B01.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
LVRM1_0167_A10.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
THY01_0046_E07.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
LVR01_0020_H10.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
LVRM1_0182_F07.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
LVRM1_0061_A10.b : GCCCGG**CAGGACCCGG*TGATGACAGGC*TGTCAGGCTCGC*TGCAAGTGACCAGGCC
LVRM1_0115_C06.b : GCCCCGGCCAGGACCCGGTTGATGACAGGCTTGTCAGGCTCGCTTGCAAGTGACCAGGCC


20110601C-013408 : CGCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
                   ---------+---------+---------+---------+---------+---------+ 159
CLNT1_0145_B01.b : CGCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
LVRM1_0167_A10.b : TGCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCGCCTGCCCCGGCACCGCCCCGAGCC
THY01_0046_E07.b : TGCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
LVR01_0020_H10.b : CGCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
LVRM1_0182_F07.b : CTCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
LVRM1_0061_A10.b : CTCGG*AACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC
LVRM1_0115_C06.b : CTCGGAAACGAGGCATGGCGCAGGCAGATGGGGCCCCCTGCCCCGGCACCGCCCCGAGCC


20110601C-013408 : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
                   ---------+---------+---------+---------+---------+---------+ 219
CLNT1_0145_B01.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
LVRM1_0167_A10.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
THY01_0046_E07.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
LVR01_0020_H10.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
LVRM1_0182_F07.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
LVRM1_0061_A10.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG
LVRM1_0115_C06.b : AGCCCTGCGTCTTCAAGCTGGTTCTCCTGGGCAGTGGCTCTGTGGGCAAGTCCAGCTTGG


20110601C-013408 : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
                   ---------+---------+---------+---------+---------+---------+ 279
CLNT1_0145_B01.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
LVRM1_0167_A10.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
THY01_0046_E07.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
LVR01_0020_H10.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
LVRM1_0182_F07.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
LVRM1_0061_A10.b : CTTTCCGGTATGTGAAGAATGACTTCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT
LVRM1_0115_C06.b : CTTTCCGGTATGTGAAGAATGACTCCAAGAGCATCCTGCCGACGGTGGGATGTGCCTTCT


20110601C-013408 : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
                   ---------+---------+---------+---------+---------+---------+ 336
CLNT1_0145_B01.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
LVRM1_0167_A10.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
THY01_0046_E07.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
LVR01_0020_H10.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
LVRM1_0182_F07.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGGNCN
LVRM1_0061_A10.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***
LVRM1_0115_C06.b : TCACCAAGGTGGTGGATTTGGGGGCTGCGTCTCTGAAGCTGGAGATCTGGGACACGG***


20110601C-013408 : *CCGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAATGCTGCG
                   ---------+---------+---------+---------+---------+---------+ 395
CLNT1_0145_B01.b : *CCGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAATGCTGCG
LVRM1_0167_A10.b : *CCGGCCAGGAGAAGTACCACGGCGTCTGCCACCTCTACTTCAGGGGCGCCAACGCTGCG
THY01_0046_E07.b : *CCGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAATGCTGCG
LVR01_0020_H10.b : *CCGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAATGCTGCG
LVRM1_0182_F07.b : CCGGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAACGCTGCG
LVRM1_0061_A10.b : *CCGGCCAGGATAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAACACTGCG
LVRM1_0115_C06.b : *CCGGCCAGGAGAAGTACCACAGCGTCTGCCACCTCTACTTCAGGGGCGCCAACGCTGCG


20110601C-013408 : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG
                   ---------+---------+---------+---------+---------+---------+ 455
CLNT1_0145_B01.b : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG
LVRM1_0167_A10.b : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG
THY01_0046_E07.b : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG
LVR01_0020_H10.b : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG
LVRM1_0182_F07.b : CTTGTGGTGTATGACGTCACCAGGAGGGATccttccctcaggcgcagcantggggctcca
LVRM1_0061_A10.b : CTTGAGGTGTATGACGTCACCAGGAAAGATTACTTTCTCAAGGGTCATCAATGGTTCAAG
LVRM1_0115_C06.b : CTTGTGGTGTATGACGTCACCAGGAAGGATTCCTTCCTCAAGGCGCAGCAGTGGCTCAAG


20110601C-013408 : GACCTGGAAGAGGAGTTCCGCCTGGGTGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG
                   ---------+---------+---------+---------+---------+---------+ 515
CLNT1_0145_B01.b : GACCTGGAAGAGGAGTTCCGCCTGGGTGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG
LVRM1_0167_A10.b : GACCTGGAGGAGGAGTTCCGCCTGGGAGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG
THY01_0046_E07.b : GACCTGGAAGAGGAGTTCCGCCTGGGTGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG
LVR01_0020_H10.b : GACCTGGAAGAGGAGTTCCGCCTGGGTGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG
LVRM1_0182_F07.b : aggacctggaagaggagatcccgcctgggtgacntggtggtgatgctggtttggcaacaa
LVRM1_0061_A10.b : GACCTGGATTAGGATTTCCACCTGagttggcgtggcgaggacaccgggaactacacagat
LVRM1_0115_C06.b : GACCTGGAAGAGGAGTTCCGCCTGGGTGACGTGGTGGTGATGCTGGTTGGCAACAAGCTG


20110601C-013408 : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCGAGAGCAAG
                   ---------+---------+---------+---------+---------+---------+ 575
CLNT1_0145_B01.b : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCGAGAGCAAG
LVRM1_0167_A10.b : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCCAGAGCAAG
THY01_0046_E07.b : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCGAGAGCAAG
LVR01_0020_H10.b : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCGAGAGCAAG
LVRM1_0182_F07.b : ctggaccttgccaggaccgggaagtgggccttttgaggaaagggaaaagaatttcccaaa
LVRM1_0061_A10.b : aggagcgtgagaaaaaggggtagggggggataatcgtaggactgcaaggggagaaagata
LVRM1_0115_C06.b : GACCTTGGCAAGGAGCGGGAGGTGGCCTTTGAGGAGGGGAAGGAGTTTGCCGAGACCAAG


20110601C-013408 : GGGCTGCTATTCATGGAAACCTCGGCCAAGCTGAACCACCAGGTGACTGAGGCCTTCGGC
                   ---------+---------+---------+---------+---------+---------+ 635
CLNT1_0145_B01.b : GGGCTGCTATTCATGGAAACCTCGGCCAAGCTGAACCACCAGGTGACTGAGGCCTTCGGC
LVRM1_0167_A10.b : GGGCTGCTGTTCATGGGAACCTCAGCCAAGCTGAAacacaatgtaaacggaggccttcgg
THY01_0046_E07.b : GGGCTGCTATTCATGGAAACCTCGGCCAAGCTGAACCACCAGGTGACTGAGGCCTTCGGC
LVR01_0020_H10.b : GGGCTGCTATTCATGGAAACCTCGGCCAAGCTGAACCACCAGGTGACTGAGGCCTTCGGC
LVRM1_0182_F07.b : aaccagggggtggcaatccttggaacccccggcccaactgaacccccaggtggatgaggc
LVRM1_0061_A10.b : agggggatacagaggggcaacgtggcaaaggaagaaaaataaaaaaataggtaagaatat
LVRM1_0115_C06.b : GGGCTGCTATTCATGGAAACCTCGGCCAAGCTGAACCACCAAGTGACTGAGGCCTTCGGC


20110601C-013408 : GCCATTGCCCAGGAGCTTTGGCGCAGAGAAGAGAGGAAGGAGGACCAGCAGCAGCAGCAG
                   ---------+---------+---------+---------+---------+---------+ 695
CLNT1_0145_B01.b : GCCATTGCCCAGGAGCTTTGGTGCAGAGAAGAGAGGAAGGAGGACCAGCAGCAGCAGCAG
LVRM1_0167_A10.b : cgccttttgtcatgcacttgtgtgcccataacaatagggaggagagacaagtttatcaga
THY01_0046_E07.b : GCCATTGCCCAGGAGCTTTGGTGCAGAGAAGAGAGGAAGGAGGACCAGCAGCAGCACCAG
LVR01_0020_H10.b : GCCATTGCCCAGGAGCTTTGGCGCAGAGAAGAGAGGAAGGAGGACCAGCAGCAGCAGCAG
LVRM1_0182_F07.b : ctttcggccctttgccagaaatttgggcccaaaaaaaaanngggaagggggaccccccct
LVRM1_0061_A10.b : ggaacagataggaacgatggtggggcatggagaaaaaggaaaaatggatgtaggggggaa
LVRM1_0115_C06.b : GCCATTGCCCAGAAGCTTTGGCGCAaaaaaaagagaagggaggaaccccatcagtatcaa


20110601C-013408 : AGAGACGCACAGCTGGATCTGAACCAGAGGCCCTCGGCGCAGGCCAGATGCTGCGCCCGC
                   ---------+---------+---------+---------+---------+---------+ 755
CLNT1_0145_B01.b : AGAGACGCACAGCTGGATCTGAACCAGAGGCCCTCGGCGCAGGCCAGATGCTGCGCCCGC
LVRM1_0167_A10.b : gagagcccaccgtagtttttgagatcaaggccattgtgtcaggactgagggttgggcccg
THY01_0046_E07.b : AGAGACGCACAGCTGGATCTGAACCAGAGGCCCTCGGCGCAGGCCAGATGCTGCGCCCGC
LVR01_0020_H10.b : AGAGACGCACAGCTGGATCTGAACCAGAGGCCCTCGGCGCAGGCCAGATGCTGCGCCCGC
LVRM1_0182_F07.b : cccccaaaaaaaccccccttgtgtttaacacaaaacccccccgccaagcaaaaatttgcc
LVRM1_0061_A10.b : agggaattatatcatgaatgtgtactgggaggaagggagtggtacaaattgataaattgt
LVRM1_0115_C06.b : agagacccacactggatctgaaacaaaagccctcggcgcag                  


20110601C-013408 : TAGAAGCAGCCTC*TCCAGGAGGGGCCGTGGGGAGGGAGGCCCCAAGCCCGGGCCCTGCC
                   ---------+---------+---------+---------+---------+---------+ 814
CLNT1_0145_B01.b : TAGAAGCAGCCTC*TCCAGNAGGGGCCGTGGGGGGAGAAGCCCCAGCCCGGGCCCCTGCC
LVRM1_0167_A10.b : caaaaatagactgcc                                            
THY01_0046_E07.b : TAAAAGAAGCCTCCTCCGGAAGGGGCCGTGGGGAaggaggcccccaagccccgggccctg
LVR01_0020_H10.b : TAGAAGCAGCCTC*TCCAGGAGGGGCCGTGGGGAGGGAGGCCCCCAGCCCGGGCCCTGCC
LVRM1_0182_F07.b : cccctaagaacccg                                             
LVRM1_0061_A10.b : ggccttacgattacacaggttattccatacagggt                        
LVRM1_0115_C06.b :                                                             


20110601C-013408 : CGCTCG*TGTTGACCAGATACTTATCCCGATTCCCCGTCGATGCTGGCCTGTTTCTGANT
                   ---------+---------+---------+---------+---------+---------+ 873
CLNT1_0145_B01.b : CGCTCG*TGTTGACCAGATACTTATCCCGATTCGCCGTCGATGCTGGCCTGTTTCTGANT
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : cccgcttcctggttgacccaaaactttatccccaatccccgtcaatgcctggcttggttc
LVR01_0020_H10.b : CGCTCCCTGTTGACCAGATACTTATCCCGATTCCCCGTCGATGCTGGCTTGTTtcctgag
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : CCCGGTGGCTCTTGGAGCTTGCATCCCCCTGAATTA........................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : CCCGGTGGCTCTTGGAGCTTGCATCCCCCTGAATTAcctcctccagagctggcgggaatc
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : ccggattccccgggggttttgggaaacttggcatcccccctgaaattcccccctccccaa
LVR01_0020_H10.b : tcccggtgggctctgggaagctggcatcccccttgaattaccttcttcccagagctgggc
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : tttcagccaagggcccaaatcatggctccaaaggtggcggcccccgtcccccaacccaaa
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : aaacttggcgggaatccttttcaacccaggggccccttttcccagggggttcccaaaggg
LVR01_0020_H10.b : ggaatcccttccagccaaagggcccctaatccagtgggctcccaaagggttgtccggccc
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : acaaatgaactcggaggccagtatgggccctcgctgcctgcctaaaaaccggggttgaac
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : gggtggggcccccccctccccccacaaaccccaaaaaaaaaaaatgaaaaccccccaggg
LVR01_0020_H10.b : ccccgtccccccaaaaaccccaaaaaccaaactgaaaccctccgaaggccccagaaattt
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : gtccgagccaccaagttggaaaatcccccccacccttttttggtgcggagaacttccccg
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : ggccccccaaaatggggcccccccctccgtttttcctgggccaccccaaaaaacccccag
LVR01_0020_H10.b : gggccccccccggccttgcccttggcccttccaaaaacccccaagggggtttgaaaaacc
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : aatgtaaaaaaggccggccatgtaacggcttccaaaaagggaagtagcccggctgctctt
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : ggggttgtaaaaacacgggcgcagggggaaaaaaacaaaaaaaagggggggaaaaaaaat
LVR01_0020_H10.b : gggtccggaaagggcaaa                                         
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : cctggttctgggccccaacaaagggagaggtggggggtttttnntttnnnnttntntaan
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b : cccccccccccccccccaccccccctactttttttttgt                    
LVR01_0020_H10.b :                                                             
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :                                                             


20110601C-013408 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 909
CLNT1_0145_B01.b : atatannnanataattanaattaaaaaattttnnattattattattttttaatat    
LVRM1_0167_A10.b :                                                             
THY01_0046_E07.b :                                                             
LVR01_0020_H10.b :                                                             
LVRM1_0182_F07.b :                                                             
LVRM1_0061_A10.b :                                                             
LVRM1_0115_C06.b :