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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013496

Length: 1,180

Sequence [FASTA format sequence]
GCTAGTCCAC GTCAACTTTT TAAAGCTTCT AATATGACCC AGCGATGGCA ACACAGAGAG
ATTTCAAATT TTGAGTACTT GATGTTTCTC AACACAATAG CAGGACGGAG TTACAATGAC
TTAAATCAGT ATCCAGTGTT TCCCTGGGTG ATTACTAATT ATGAATCAGA AGAACTGGAT
CTTACTTTGC CAAGTAACTT CAGAGATTTG TCCAAGCCAA TAGGAGCTTT GAATCCAAAA
AGAGCAGCAT TCTTTGCAGA GCGTTATGAA TCCTGGGAAG ATGATCAAGT CCCAAAGTTC
CACTATGGTA CTCATTACTC AACTGCAAGT TTTGTTCTTG CATGGCTGCT AAGAATAGAA
CCCTTCACAA CGTATTTCCT AAATTTGCAA GGAGGGAAAT TTGATCACGC AGATCGAACA
TTTTCATCAA TTTCCAGAGC CTGGCGAAAC AGTCAGCGTG ATACATCTGA TATTAAGGAG
TTGATTCCTG AATTTTATTA CCTCCCTGAG ATGTTTGTCA ACTTCAATGA TTATAATCTT
GGAGTGATGG ATGACGGGAC AGTAGTGTCT GATGTTGAAC TTCCTCCTTG GGCCAGAACC
TCGGAAGAAT TTGTTCGCAT AAACAGATTG GCTCTGGAGA GTGAATTTGT TTCCTGCCAG
CTTCACCAAT GGATTGATCT CATTTTTGGC TATAAACAGC AAGGACCAGA GGCTGTTCGA
GCCCTCAATG TGTTCTATTA TCTGACCTAT GAAGGAGCTG TCAATCTCAA TTCAATATCT
GATCCGATAT TGAGAGAGGC TGTCGAATCT CAAATCCGAA GCTTTGGGCA GACGCCTTCT
CAACTACTCA TAGAGCCCCA TCCTCCCAGA GGTTCTGCCA TGCAAGCGAG TCCATTGATG
TTCACAGACC AAGCTCAGCA GGACGTTATC ATGGTTCTAA AGTTCCCCTC CAACTCCCCT
GTCACTCACG TGGCGGCCAA CACCCAGCCT GGGTTTGGCA ATTCCTGCCG TGATCACAGT
CACTGCCAAC AGGCTCTTCG CAGTGAACAA GTGGGACAAC CTTCCGGCTC ATCAAGGTGC
TGTACAAGAC CAGCCATACC AGCTGCCAGT GGAAATCGAT CCTCTCATAG CCAGCAATAC
AGGAATGCAC AGGGAGACAA TCACGGACCT TTTAGACCAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLRBAlipopolysaccharide-responsive and beige-like anchor protein isoform 2 [Homo sapiens]. 6670.0
Contig/Assembly ProteinLRBAlipopolysaccharide-responsive and beige-like anchor protein isoform 1 [Homo sapiens]. 6670.0
Contig/Assembly ProteinNBEAneurobeachin isoform 2 [Homo sapiens]. 575e-179
Contig/Assembly ProteinNBEAneurobeachin isoform 1 [Homo sapiens]. 575e-179
Contig/Assembly ProteinNBEAL1neurobeachin-like protein 1 [Homo sapiens]. 3571e-98
Contig/Assembly ProteinNBEAL2neurobeachin-like protein 2 [Homo sapiens]. 3532e-97
Contig/Assembly ProteinWDFY3WD repeat and FYVE domain-containing protein 3 [Homo sapiens]. 3393e-93
Contig/Assembly ProteinWDFY4WD repeat- and FYVE domain-containing protein 4 [Homo sapiens]. 3057e-83
Contig/Assembly ProteinNSMAFprotein FAN isoform 2 [Homo sapiens]. 2916e-79
Contig/Assembly ProteinNSMAFprotein FAN isoform 1 [Homo sapiens]. 2916e-79


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLrbalipopolysaccharide-responsive and beige-like anchor protein isoform beta [Mus musculus]. 6710.0
Contig/Assembly ProteinLrbalipopolysaccharide-responsive and beige-like anchor protein isoform alpha [Mus musculus]. 6710.0
Contig/Assembly ProteinLrbalipopolysaccharide-responsive and beige-like anchor protein isoform gamma [Mus musculus]. 6710.0
Contig/Assembly ProteinNbeaneurobeachin [Mus musculus]. 573e-179
Contig/Assembly ProteinNbeal1neurobeachin like 1 [Mus musculus]. 3583e-99
Contig/Assembly ProteinNbeal2neurobeachin-like protein 2 [Mus musculus]. 3531e-97
Contig/Assembly ProteinWdfy3WD repeat and FYVE domain-containing protein 3 [Mus musculus]. 3402e-93
Contig/Assembly ProteinWdfy4WD repeat and FYVE domain containing 4 [Mus musculus]. 3101e-84
Contig/Assembly ProteinNsmafprotein FAN [Mus musculus]. 2884e-78
Contig/Assembly ProteinLystlysosomal-trafficking regulator [Mus musculus]. 2547e-68


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475463PREDICTED: similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 3 [Canis familiaris]. 6690.0
Contig/Assembly ProteinLOC475463PREDICTED: similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 2 [Canis familiaris]. 6690.0
Contig/Assembly ProteinLOC475463PREDICTED: similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 1 [Canis familiaris]. 6690.0
Contig/Assembly ProteinLOC475463PREDICTED: similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 5 [Canis familiaris]. 6690.0
Contig/Assembly ProteinLOC477305PREDICTED: similar to neurobeachin isoform 2 [Canis familiaris]. 573e-179
Contig/Assembly ProteinLOC477305PREDICTED: similar to neurobeachin isoform 1 [Canis familiaris]. 573e-179
Contig/Assembly ProteinLOC477305PREDICTED: similar to neurobeachin isoform 4 [Canis familiaris]. 573e-179
Contig/Assembly ProteinLOC477305PREDICTED: similar to Neurobeachin protein (Lysosomal trafficking regulator 2) (BCL8B protein) isoform 3 [Canis familiaris]. 573e-179
Contig/Assembly ProteinLOC484784PREDICTED: similar to CG1332-PA [Canis familiaris]. 3525e-97
Contig/Assembly ProteinLOC487841PREDICTED: similar to WD repeat and FYVE domain containing 3 isoform 1 isoform 1 [Canis familiaris]. 3393e-93


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLRBAPREDICTED: LPS-responsive vesicle trafficking, beach and anchor containing, partial [Bos taurus]. 6690.0
Contig/Assembly ProteinLRBAPREDICTED: LPS-responsive vesicle trafficking, beach and anchor containing [Bos taurus]. 6680.0
Contig/Assembly ProteinNBEAPREDICTED: neurobeachin [Bos taurus]. 573e-179
Contig/Assembly ProteinNBEAL1neurobeachin-like protein 1 [Bos taurus]. 3402e-93
Contig/Assembly ProteinWDFY3PREDICTED: lysosomal trafficking regulator-like [Bos taurus]. 3392e-93
Contig/Assembly ProteinWDFY3PREDICTED: lysosomal trafficking regulator-like [Bos taurus]. 3392e-93
Contig/Assembly ProteinWDFY4PREDICTED: hCG1745555-like [Bos taurus]. 3123e-85
Contig/Assembly ProteinWDFY4WD repeat- and FYVE domain-containing protein 4 [Bos taurus]. 3123e-85
Contig/Assembly ProteinNSMAFPREDICTED: neutral sphingomyelinase (N-SMase) activation associated factor [Bos taurus]. 2993e-81
Contig/Assembly ProteinNBEAL2PREDICTED: neurobeachin-like 2 [Bos taurus]. 2957e-80


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLRBAPREDICTED: lipopolysaccharide-responsive and beige-like anchor protein, partial [Sus scrofa]. 553e-158
Contig/Assembly ProteinWDFY3PREDICTED: WD repeat- and FYVE domain-containing protein 4 [Sus scrofa]. 3092e-84
Contig/Assembly ProteinNSMAFPREDICTED: protein FAN [Sus scrofa]. 2984e-81
Contig/Assembly ProteinLYSTPREDICTED: LOW QUALITY PROTEIN: lysosomal-trafficking regulator [Sus scrofa]. 2246e-59
Contig/Assembly ProteinLOC100624238PREDICTED: neurobeachin-like protein 1-like, partial [Sus scrofa]. 2224e-58
Contig/Assembly ProteinNBEAPREDICTED: neurobeachin [Sus scrofa]. 1586e-39
Contig/Assembly ProteinLOC100626693PREDICTED: neurobeachin-like, partial [Sus scrofa]. 1401e-33


Assembly Members: 4      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010084H05ITT01_0084_H05.bBW983501 
OVR010026D12OVR01_0026_D12.bBP143011 AK394819
SMG010087B01SMG01_0087_B01.bFS720759 
UTR010064B01UTR01_0064_B01.bBP462971 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
441C200.500WSGCC/A
T200.500GCT/A


Alignment:      TOP

20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0026_D12.b : ggggcattatggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0064_B01.b :
ITT01_0084_H05.b :
SMG01_0087_B01.b :
20110601C-013496 : ............................GCTAGTCCACGTCAACTTTTTAAAGCTTCTAA
---------+---------+---------+---------+---------+---------+ 32
OVR01_0026_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxGCTAGTCCACGTCAACTTTTTAAAGCTTCTAA
UTR01_0064_B01.b : tttttatctgcttcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0084_H05.b :
SMG01_0087_B01.b :
20110601C-013496 : TATGACCCAGCGATGGCAACACAGAGAGATTTCAAATTTTGAGTACTTGATGTTTCTCAA
---------+---------+---------+---------+---------+---------+ 92
OVR01_0026_D12.b : TATGACCCAGCGATGGCAACACAGAGAGATTTCAAATTTTGAGTACTTGATGTTTCTCAA
UTR01_0064_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtggGAGTACTTGATGTTTCTCAA
ITT01_0084_H05.b : nnnnggtgxxx
SMG01_0087_B01.b :
20110601C-013496 : CACAATAGCAGGACGGAGTTACAATGACTTAAATCAGTATCCAGTGTTTCCCTGGGTGAT
---------+---------+---------+---------+---------+---------+ 152
OVR01_0026_D12.b : CACAATAGCAGGACGGAGTTACAATGACTTAAATCAGTATCCAGTGTTTCCCTGGGTGAT
UTR01_0064_B01.b : CACAATAGCAGGACGGAGTTACAATGACTTAAATCAGTATCCAGTGTTTCCCTGGGTGAT
ITT01_0084_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTTCCCTGGGTGAT
SMG01_0087_B01.b :
20110601C-013496 : TACTAATTATGAATCAGAAGAACTGGATCTTACTTTGCCAAGTAACTTCAGAGATTTGTC
---------+---------+---------+---------+---------+---------+ 212
OVR01_0026_D12.b : TACTAATTATGAATCAGAAGAACTGGATCTTACTTTGCCAAGTAACTTCAGAGATTTGTC
UTR01_0064_B01.b : TACTAATTATGAATCAGAAGAACTGGATCTTACTTTGCCAAGTAACTTCAGAGATTTGTC
ITT01_0084_H05.b : TACTAATTATGAATCAGAAGAACTGGATCTTACTTTGCCAAGTAACTTCAGAGATTTGTC
SMG01_0087_B01.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxx
20110601C-013496 : CAAGCCAATAGGAGCTTTGAATCCAAAAAGAGCAGCATTCTTTGCAGAGCGTTATGAATC
---------+---------+---------+---------+---------+---------+ 272
OVR01_0026_D12.b : CAAGCCAATAGGAGCTTTGAATCCAAAAAGAGCAGCATTCTTTGCAGAGCGTTATGAATC
UTR01_0064_B01.b : CAAGCCAATAGGAGCTTTGAATCCAAAAAGAGCAGCATTCTTTGCAGAGCGTTATGAATC
ITT01_0084_H05.b : CAAGCCAATAGGAGCTTTGAATCCAAAAAGAGCAGCATTCTTTGCAGAGCGTTATGAATC
SMG01_0087_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGCAGCATTCTTTGCAGAGCGTTATGAATC
20110601C-013496 : CTGGGAAGATGATCAAGTCCCAAAGTTCCACTATGGTACTCATTACTCAACTGCAAGTTT
---------+---------+---------+---------+---------+---------+ 332
OVR01_0026_D12.b : CTGGGAAGATGATCAAGTCCCAAAGTTCCACTATGGTACTCATTACTCAACTGCAAGTTT
UTR01_0064_B01.b : CTGGGAAGATGATCAAGTCCCAAAGTTCCACTATGGTACTCATTACTCAACTGCAAGTTT
ITT01_0084_H05.b : CTGGGAAGATGATCAAGTCCCAAAGTTCCACTATGGTACTCATTACTCAACTGCAAGTTT
SMG01_0087_B01.b : CTGGGAAGATGATCAAGTCCCAAAGTTCCACTATGGTACTCATTACTCAACTGCAAGTTT
20110601C-013496 : TGTTCTTGCATGGCTGCTAAGAATAGAACCCTTCACAACGTATTTCCTAAATTTGCAAGG
---------+---------+---------+---------+---------+---------+ 392
OVR01_0026_D12.b : TGTTCTTGCATGGCTGCTAAGAATAGAACCCTTCACAACGTATTTCCTAAATTTGCAAGG
UTR01_0064_B01.b : TGTTCTTGCATGGCTGCTAAGAATAGAACCCTTCACAACGTATTTCCTAAATTTGCAAGG
ITT01_0084_H05.b : TGTTCTTGCATGGCTGCTAAGAATAGAACCCTTCACAACGTATTTCCTAAATTTGCAAGG
SMG01_0087_B01.b : TGTTCTTGCATGGCTGCTAAGAATAGAACCCTTCACAACGTATTTCCTAAATTTGCAAGG
20110601C-013496 : AGGGAAATTTGATCACGCAGATCGAACATTTTCATCAATTTCCAGAGCCTGGCGAAACAG
---------+---------+---------+---------+---------+---------+ 452
OVR01_0026_D12.b : AGGGAAATTTGATCACGCAGATCGAACATTTTCATCAATTTCCAGAGCTTGGCGAAACAG
UTR01_0064_B01.b : AGGGAAATTTGATCACGCAGATCGAACATTTTCATCAATTTCCAGAGCCTGGCGAAACAG
ITT01_0084_H05.b : AGGGAAATTTGATCACGCAGATCGAACATTTTCATCAATTTCCAGAGCTTGGCGAAACAG
SMG01_0087_B01.b : AGGGAAATTTGATCACGCAGATCGAACATTTTCATCAATTTCCAGAGCCTGGCGAAACAG
20110601C-013496 : TCAGCGTGATACATCTGATATTAAGGAGTTGATTCCTGAATTTTATTACCTCCCTGAGAT
---------+---------+---------+---------+---------+---------+ 512
OVR01_0026_D12.b : TCAGCGTGATACATCTGATATTAAGGAGTTGATTCCTGAATTTTATTACCTCCCTGAGAT
UTR01_0064_B01.b : TCAGCGTGATACATCTGATATTAAGGAGTTGATTCCTGAATTTTATTACCTCCCTGAGAT
ITT01_0084_H05.b : TCAGCGTGATACATCTGATATTAAGGAGTTGATTCCTGAATTTTATTACCTCCCTGAGAT
SMG01_0087_B01.b : TCAGCGTGATACATCTGATATTAAGGAGTTGATTCCTGAATTTTATTACCTCCCTGAGAT
20110601C-013496 : GTTTGTCAACTTCAATGATTATAATCTTGGAGTGATGGATGACGGGACAGTAGTGTCTGA
---------+---------+---------+---------+---------+---------+ 572
OVR01_0026_D12.b : GTTTGTCAACTTCAATGATTATAATCTTGGAGTGATGGATGACGGGACAGTAGTGTCTGA
UTR01_0064_B01.b : GTTTGTCAACTTCAATGATTATAATCTTGGAGTGATGGATGACGGGACAGTAGTGTCTGA
ITT01_0084_H05.b : GTTTGTCAACTTCAATGATTATAATCTTGGAGTGATGGATGACGGGACAGTAGTGTCTGA
SMG01_0087_B01.b : GTTTGTCAACTTCAATGATTATAATCTTGGAGTGATGGATGACGGGACAGTAGTGTCTGA
20110601C-013496 : TGTTGAACTTCCTCCTTGGGCCAGAACCTCGGAAGAATTTGTTCGCATAAACAGATTGGC
---------+---------+---------+---------+---------+---------+ 632
OVR01_0026_D12.b : TGTTGAACTTCCTCCTTGGGCCAGAACCTCGGAAGAATTTGTTCGCATAAACAGATTGGC
UTR01_0064_B01.b : TGTTGAACTTCCTCCTTGGGCCAGAACCTCGGAAGAATTTGTTCGCATAAACAGATTGGC
ITT01_0084_H05.b : TGTTGAACTTCCTCCTTGGGCCAGAACCTCGGAAGAATTTGTTCGCATAAACAGATTGGC
SMG01_0087_B01.b : TGTTGAACTTCCTCCTTGGGCCAGAACCTCGGAAGAATTTGTTCGCATAAACAGATTGGC
20110601C-013496 : TCTGGAGAGTGAATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCTCATTTTTGGCTA
---------+---------+---------+---------+---------+---------+ 692
OVR01_0026_D12.b : TCTGGAGAGTGAATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCTCATTTTTGGCTA
UTR01_0064_B01.b : TCTGGAGAGTGAATTTGTTTCCTGCCACCTTCACCAATGGATTGATCTCATTTTTGGCTA
ITT01_0084_H05.b : TCTGGAGAGTGAATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCTCATTTTTGGCTA
SMG01_0087_B01.b : TCTGGAGAGTGAATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCTCATTTTTGGCTA
20110601C-013496 : TAAACAGCAAGGACCAGAGGCTGTTCGAGCCCTCAATGTGTTCTATTATCTGACCTATGA
---------+---------+---------+---------+---------+---------+ 752
OVR01_0026_D12.b : TTAACAGCAAGGACCAGAGGCTGTTCGAGCCCTCAATGTGTTCTATTATCTGACCTATGA
UTR01_0064_B01.b : TAAACAGCAAGGACCAGAGGCTGTTCGAGCCCTCAATGTGTTCTATTATCTGACCTATGA
ITT01_0084_H05.b : TAAACAGCAAGGACCAGAGGCTGTTCGAGCCCTCAATGTGTTCTATTATCTGACCTATGA
SMG01_0087_B01.b : TAAACAGCAAGGACCAGAGGCTGTTCGAGCCCTCAATGTGTTCTATTATCTGACCTATGA
20110601C-013496 : AGGAGCTGTCAATCTCAATTCAATATCTGATCCGATATTGAGAGAGGCTGTCGAATCTCA
---------+---------+---------+---------+---------+---------+ 812
OVR01_0026_D12.b : AGGAGCTGTCAATCTCAATTCAATATCTGATCCGATATTGAGAGAGGCTGTCGAATCTCA
UTR01_0064_B01.b : AGGAGCTGTCAATCTCAATTCAATATCTGATCCGATATTGAGAGAGGCTGTCGAATCTCA
ITT01_0084_H05.b : AGGAGCTGTCAATCTCAATTCAATATCTGATCCGATATTGAGAGAGGCTGTCGAATCTCA
SMG01_0087_B01.b : AGGAGCTGTCAATCTCAATTCAATATCTGATCCGATATTGAGAGAGGCTGTCGAATCTCA
20110601C-013496 : AATCCGAAGCTTTGGGCAGACGCCTTCTCAACTACTCATAGAGCCCCATCCTCCCAGAGG
---------+---------+---------+---------+---------+---------+ 872
OVR01_0026_D12.b : NATCCGAAGCTTTGGGCAGACGCCTTCTCAACTACTCAAAGAGCCCCATCCTCCCAGAGG
UTR01_0064_B01.b : AATCCGAAGCTTTGGGCAGACGCCTTCTCAACTACTCATAGAGCCCCATCCTCCCAGAGG
ITT01_0084_H05.b : AATCCGAAGCTTTGGGCAGACGCCTTCTCAACTACTCATAGAGCCCCATCCTCCCAGAGG
SMG01_0087_B01.b : AATCCGAAGCTTTGGGCAGACGCCTTCTCAACTACTCATAGAGCCCCATCCTCCCAGAGG
20110601C-013496 : TTCTGCCATGCAAGCGAGTCCATTGATGTTCACAGACCAAGCTCAGCAGGACGTTATCAT
---------+---------+---------+---------+---------+---------+ 932
OVR01_0026_D12.b : TTCTGCCATGCAAGCGAGTCCATTGATGTTCACAGAACAAGCTCAACAGGgacgtttcat
UTR01_0064_B01.b : TTCTGCCATGCAAGCGAGTCCATTGATGTTCACAGACCAAGCTCAGCAGGACGTTATCAT
ITT01_0084_H05.b : TTCTGCCATGCAAGCGAGTCCATTGATGTTCACAGACCAAGCTCAGCAGGACGTTATCAT
SMG01_0087_B01.b : TTCTGCCATGCAAGCGAGTCCATTGATGTTCACAGACCAAGCTCAGCAGGACGTTATCAT
20110601C-013496 : GGTTCTAAAGTTCCCCTCCAACTCCCCTGTCACTCACGTGGCGGCCAACACCCAGCCTGG
---------+---------+---------+---------+---------+---------+ 992
OVR01_0026_D12.b : gggtcttaaagttccccttcaactcccctggtcactcaggggggcgggcaaaaccccagc
UTR01_0064_B01.b : GGTTCTAAGGTTCCCCTCCAACTCCCCTGTCACTCACGTGGCGGCCAACACCCAGGCTGG
ITT01_0084_H05.b : GGTTCTAAAGTTCCCCTCCAACTCCC*TGTCACTCACGTGGCGGCCAACACCCAGCCTGG
SMG01_0087_B01.b : GGTTCTAAAGTTCCCCTCCAACTCCCCTGTCACTCACGTGGCGGCCAACACCCAGCCTGG
20110601C-013496 : GTTTGGCAATTCCTGCCGTGATCACAGTCACTGCCAACAGGCTCTTCGCAGTGAACAAGT
---------+---------+---------+---------+---------+---------+ 1052
OVR01_0026_D12.b : ccggggttggggcaattcccggcccggggatccacggtcccttgccaaccagggcttcct
UTR01_0064_B01.b : GGTTGGCAATTCCTGCCGTGATCCGGGTCCCTGCCAAAGGGCTCCTCGCAATGAACAAGT
ITT01_0084_H05.b : GTTGGGCANNTCCTGC*GTGATCACAGTCACTGCCAACAGGCTCTTCGCAGTGAAACAGT
SMG01_0087_B01.b : G*TTGGCAATTCCTGCCGTGATCACAGTCACTGGCCACAGGCTCTTCGCAGTGAACAAGT
20110601C-013496 : GGGACAACCTTCCGGCTCATCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGG
---------+---------+---------+---------+---------+---------+ 1112
OVR01_0026_D12.b : ttccaaagggaaaaaaaggggg
UTR01_0064_B01.b : GGGACAACCTTCCGGCTCATCAAGGgtgctgttaaaaaatcacccctaccaacctgccca
ITT01_0084_H05.b : GGGCACACCTTCCGGCTCATNCAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGG
SMG01_0087_B01.b : GGCACAACCTTCCGGCTCATCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGG
20110601C-013496 : AAATCGATCCTCTCATAGCCAGCAATACAGGAATGCACAGGGAGACAATCACGGACCTTT
---------+---------+---------+---------+---------+---------+ 1172
OVR01_0026_D12.b :
UTR01_0064_B01.b : ttggaaaaccattcctcctcaaaacccgccaaaaacaggaagtgcccag
ITT01_0084_H05.b : AAATCGATCCTCTCATAGCCAGCAATACAGGAATGCACAGGGAGACAATCACGGACCTTT
SMG01_0087_B01.b : AAATCGATCCTCTCATAcccgccatacaggaatgcccagagacaaatcacgggacttttt
20110601C-013496 : TAGACCAA....................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : TAGACCAAgcattcagtccatcccagtggcttgtcatcactcggacaacggctataatct
SMG01_0087_B01.b : aaacaaagcattcaagtccttcccagtgctttttcatcccttcggaaaacgctaaatctt
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : atctgtggctcgggataagagttccggttctattctacgaacccggaatttgttcaagtg
SMG01_0087_B01.b : atcggtggctctcggaaaaaagtttccgggtcttatttcaaaacccggaaaatggtccaa
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : atattggcccttgggatgcccccctgctcacccctcggagcaaaatgggggaatttgtaa
SMG01_0087_B01.b : gtgggatttggcccttggggaggccgcccctggccccacccgttcggagtcaaaatgggg
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : tctcccggtccgggaccccccttgcttcggagggatgaaaaacggggtttggaaacccgc
SMG01_0087_B01.b : ggaaattgcaactttttcagaggaccgggaacccccccttcgccttggatcggaatgaaa
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : ggggaaccttccgggccctgagggcaaaaaaaaccttttgtttccgaaaaatgggtgtgt
SMG01_0087_B01.b : aacccgggggttggaaaaaccccgggtgggaacccccccctggggtctctggagggccaa
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b : tttaaaaagccccctctt
SMG01_0087_B01.b : aaaaaattcttgtgttgttttcccgaaaaatccgtggtttattgtttcaaaagaaaccgc
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b :
SMG01_0087_B01.b : cccctctcccaagaaattttaaaaccgggggccaaaaccccaaaaacttctttccaaaag
20110601C-013496 : ............................................................
---------+---------+---------+---------+---------+---------+ 1180
OVR01_0026_D12.b :
UTR01_0064_B01.b :
ITT01_0084_H05.b :
SMG01_0087_B01.b : aggcgcggtatataaaatttttttttttgggagaacccccccccaa