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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013594

Length: 1,000

Sequence [FASTA format sequence]
TTTGATTTTA GTGGCTTTCC TTCCTTTTAT TTTCTGTCGT GTGCGGGTTT TGGCGTCCAA
GCACATTTGC AGCTCGTCCG AGTCCATGTC AGCGGTGGTC GCCCCTGCAG CTGCTCACCC
TGACACCATG CACTCCGAAG CAGAAGAATC TAAGGAAGTG GCCACAGATG TCTTTAATTC
CAAAAACCTG GCCGTTCAGG CACAAAAGAA GATCTTGGGT AAGATGGTGT CCAAGTCCAT
CGCCACCACC TTGATTGACG ACACGAGTAG CGAAGTGCTG GATGAGCTCT ACAGGGTGAC
CAAGGAGTAC ACCCAGAACA AGAAGGAGGC AGAGAAAATC ATAAAAAACC TCATCAAAAC
AGTCATCAAG CTGGCCATTC TCTACAGGAA TAATCAATTT AACCAAGATG AGCTAGCACT
GATGGAGAAA TTTAAGAAGA AAGTCCACCA ACTTGCTATG ACCGTGGTCA GTTTTCATCA
GGTGGATTTC ACCTTTGACC GGAATGTGCT ATCCAGGCTG CTCAATGAGT GCAGAGAGCT
GCTCCACCAG ATCATCCAGC GTCACCTCAC CGCCAAGTCA CACGGACGGA TTAACAAGGT
CTTTGATCAT TTTTCAGATT GTGATTTCTT GGCCGCCTTG TATAATCCCT TTGGAAATTT
CAAACCGCAC TTACAGAAAC TGTGTGATGG TATCAACAAA ATGTTGGATG AAGATAACAT
ATGAGCATGT GAGTTAGGAT TGTGACTGCT CATGATTTAC TGGAAGGAGG AACACTGCTG
ATTTATGAAG GAAAAAAATA ATGTTTTAGA GATTATGCAT ATTTCAGAAA GACTTTGTGT
AATTCAGTTG TCTGACATCA ATGACAATGC TTGATAAGGC TTGTTCTATT TGAAGAAATG
CATAATGCCA AAAATTCTGG TAAAAAGCTT CCCAGAGGTT AATAGATCAC AGAAAAACCG
TATGGTTATA TAATGCCCAA CTAGAGTTAT ATAAAGAAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTNFAIP8tumor necrosis factor alpha-induced protein 8 isoform a [Homo sapiens]. 384e-107O
Contig/Assembly ProteinTNFAIP8tumor necrosis factor alpha-induced protein 8 isoform b [Homo sapiens]. 364e-101O
Contig/Assembly ProteinTNFAIP8L3tumor necrosis factor alpha-induced protein 8-like protein 3 [Homo sapiens]. 2617e-70
Contig/Assembly ProteinTNFAIP8L1tumor necrosis factor alpha-induced protein 8-like protein 1 [Homo sapiens]. 2347e-62O
Contig/Assembly ProteinTNFAIP8L1tumor necrosis factor alpha-induced protein 8-like protein 1 [Homo sapiens]. 2347e-62O
Contig/Assembly ProteinTNFAIP8L2tumor necrosis factor alpha-induced protein 8-like protein 2 [Homo sapiens]. 2118e-55O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTnfaip8tumor necrosis factor alpha-induced protein 8 isoform 1 [Mus musculus]. 391e-109O
Contig/Assembly ProteinTnfaip8tumor necrosis factor alpha-induced protein 8 isoform 2 [Mus musculus]. 3583e-99O
Contig/Assembly ProteinTnfaip8l3tumor necrosis factor alpha-induced protein 8-like protein 3 [Mus musculus]. 2492e-66O
Contig/Assembly ProteinTnfaip8l1tumor necrosis factor alpha-induced protein 8-like protein 1 [Mus musculus]. 2293e-60O
Contig/Assembly ProteinTnfaip8l2tumor necrosis factor alpha-induced protein 8-like protein 2 [Mus musculus]. 2062e-53O
Contig/Assembly ProteinTnfaip8tumor necrosis factor alpha-induced protein 8 isoform 3 [Mus musculus]. 2047e-53O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC481428PREDICTED: similar to tumor necrosis factor, alpha-induced protein 8 [Canis familiaris]. 366e-101
Contig/Assembly ProteinLOC487552PREDICTED: similar to tumor necrosis factor, alpha-induced protein 8-like 3 [Canis familiaris]. 2532e-67O
Contig/Assembly ProteinLOC485034PREDICTED: similar to tumor necrosis factor, alpha-induced protein 8-like 1 [Canis familiaris]. 2401e-63
Contig/Assembly ProteinLOC483192PREDICTED: similar to tumor necrosis factor, alpha-induced protein 8-like 2 [Canis familiaris]. 2071e-53O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinTNFAIP8tumor necrosis factor alpha-induced protein 8 [Bos taurus]. 380e-106O
Contig/Assembly ProteinTNFAIP8L3PREDICTED: tumor necrosis factor, alpha-induced protein 8-like 3-like [Bos taurus]. 2571e-68O
Contig/Assembly ProteinTNFAIP8L3PREDICTED: tumor necrosis factor, alpha-induced protein 8-like 3-like [Bos taurus]. 2571e-68O
Contig/Assembly ProteinTNFAIP8L1tumor necrosis factor alpha-induced protein 8-like protein 1 [Bos taurus]. 2392e-63O
Contig/Assembly ProteinTNFAIP8L2tumor necrosis factor alpha-induced protein 8-like protein 2 [Bos taurus]. 2062e-53O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100524014PREDICTED: tumor necrosis factor alpha-induced protein 8-like [Sus scrofa]. 417e-117O
Contig/Assembly ProteinLOC100522001PREDICTED: tumor necrosis factor alpha-induced protein 8-like protein 3-like, partial [Sus scrofa]. 2591e-69
Contig/Assembly ProteinTNFAIP8L2tumor necrosis factor, alpha-induced protein 8-like 2 [Sus scrofa]. 2061e-53O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010017A11AMP01_0017_A11.bBW956222 
KDN010083B11KDN01_0083_B11.bFS677008 
LNG010079A10LNG01_0079_A10.bBP433798 AK232094
OVRM10166E11OVRM1_0166_E11.bBP459271 
OVRT10096H07OVRT1_0096_H07.bFS694275 AK395975
OVRT10136G06OVRT1_0136_G06.bHX237732 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
131A200.333WNAAC/N
C310.667CAC/H


Alignment:      TOP

20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRT1_0096_H07.b :
LNG01_0079_A10.b :
AMP01_0017_A11.b : nntttacgaatcatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0166_E11.b :
KDN01_0083_B11.b :
OVRT1_0136_G06.b :
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRT1_0096_H07.b : nnaagttnnnnnnnnttccgttagcgttacgaggxxxxxxxxxxxxxx
LNG01_0079_A10.b : nnntttgcatggataagacagtttnacxxxxxxxxxxxx
AMP01_0017_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0166_E11.b : nagt
KDN01_0083_B11.b :
OVRT1_0136_G06.b : nnnaacatacnnnnnnnnnccg
20110601C-013594 : .....................................TTTGATTTTAGTGGCTTTCCTTC
---------+---------+---------+---------+---------+---------+ 23
OVRT1_0096_H07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTTGATTTTAGTGGCTTTCCTTC
LNG01_0079_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgATTTTAGTGGCTTTCCTTC
AMP01_0017_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxATTTTAGTGGCTTTCCTTC
OVRM1_0166_E11.b : tgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxatcttt
KDN01_0083_B11.b : ttttcctgaggtggcctgg
OVRT1_0136_G06.b : ttagcgcacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013594 : CTTTTATTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCCGAGT
---------+---------+---------+---------+---------+---------+ 83
OVRT1_0096_H07.b : CTTTTATTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCCGAGT
LNG01_0079_A10.b : CTTTTATTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCCGAGT
AMP01_0017_A11.b : CTTTTATTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCCGAGT
OVRM1_0166_E11.b : tTTTTATTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCTGAGT
KDN01_0083_B11.b : atttttTTTTCTGTCGTGTGCGGGTTT*GGCGTCCA*GCACATTTGCAGCTCGTCCGAGT
OVRT1_0136_G06.b : xxxxxxTTTTCTGTCGTGTGCGGGTTTTGGCGTCCAAGCACATTTGCAGCTCGTCCGAGT
20110601C-013594 : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGCACTCCGAAGCAG
---------+---------+---------+---------+---------+---------+ 143
OVRT1_0096_H07.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGCACTCCGAAGCAG
LNG01_0079_A10.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGAACTCCGAAGCAG
AMP01_0017_A11.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGCACTCCGAAGCAG
OVRM1_0166_E11.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGCACTCCGAAGCAG
KDN01_0083_B11.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGAACTCCGAAGCAG
OVRT1_0136_G06.b : CCATGTCAGCGGTGGTCGCCCCTGCAGCTGCTCACCCTGACACCATGCACTCCGAAGCAG
20110601C-013594 : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
---------+---------+---------+---------+---------+---------+ 203
OVRT1_0096_H07.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
LNG01_0079_A10.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
AMP01_0017_A11.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
OVRM1_0166_E11.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCTGTTCAGGCAC
KDN01_0083_B11.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
OVRT1_0136_G06.b : AAGAATCTAAGGAAGTGGCCACAGATGTCTTTAATTCCAAAAACCTGGCCGTTCAGGCAC
20110601C-013594 : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
---------+---------+---------+---------+---------+---------+ 263
OVRT1_0096_H07.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
LNG01_0079_A10.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
AMP01_0017_A11.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
OVRM1_0166_E11.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
KDN01_0083_B11.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
OVRT1_0136_G06.b : AAAAGAAGATCTTGGGTAAGATGGTGTCCAAGTCCATCGCCACCACCTTGATTGACGACA
20110601C-013594 : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
---------+---------+---------+---------+---------+---------+ 323
OVRT1_0096_H07.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
LNG01_0079_A10.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
AMP01_0017_A11.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
OVRM1_0166_E11.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
KDN01_0083_B11.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
OVRT1_0136_G06.b : CGAGTAGCGAAGTGCTGGATGAGCTCTACAGGGTGACCAAGGAGTACACCCAGAACAAGA
20110601C-013594 : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
---------+---------+---------+---------+---------+---------+ 383
OVRT1_0096_H07.b : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
LNG01_0079_A10.b : AGGAGGCAGAGAAAATCATCAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
AMP01_0017_A11.b : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
OVRM1_0166_E11.b : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
KDN01_0083_B11.b : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
OVRT1_0136_G06.b : AGGAGGCAGAGAAAATCATAAAAAACCTCATCAAAACAGTCATCAAGCTGGCCATTCTCT
20110601C-013594 : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
---------+---------+---------+---------+---------+---------+ 443
OVRT1_0096_H07.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
LNG01_0079_A10.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
AMP01_0017_A11.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
OVRM1_0166_E11.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
KDN01_0083_B11.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
OVRT1_0136_G06.b : ACAGGAATAATCAATTTAACCAAGATGAGCTAGCACTGATGGAGAAATTTAAGAAGAAAG
20110601C-013594 : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
---------+---------+---------+---------+---------+---------+ 503
OVRT1_0096_H07.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
LNG01_0079_A10.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
AMP01_0017_A11.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
OVRM1_0166_E11.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
KDN01_0083_B11.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
OVRT1_0136_G06.b : TCCACCAACTTGCTATGACCGTGGTCAGTTTTCATCAGGTGGATTTCACCTTTGACCGGA
20110601C-013594 : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
---------+---------+---------+---------+---------+---------+ 563
OVRT1_0096_H07.b : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
LNG01_0079_A10.b : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
AMP01_0017_A11.b : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
OVRM1_0166_E11.b : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
KDN01_0083_B11.b : ATGTGCTATCCAGGCTTCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
OVRT1_0136_G06.b : ATGTGCTATCCAGGCTGCTCAATGAGTGCAGAGAGCTGCTCCACCAGATCATCCAGCGTC
20110601C-013594 : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
---------+---------+---------+---------+---------+---------+ 623
OVRT1_0096_H07.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
LNG01_0079_A10.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
AMP01_0017_A11.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
OVRM1_0166_E11.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
KDN01_0083_B11.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
OVRT1_0136_G06.b : ACCTCACCGCCAAGTCACACGGACGGATTAACAAGGTCTTTGATCATTTTTCAGATTGTG
20110601C-013594 : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
---------+---------+---------+---------+---------+---------+ 683
OVRT1_0096_H07.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
LNG01_0079_A10.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
AMP01_0017_A11.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
OVRM1_0166_E11.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
KDN01_0083_B11.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
OVRT1_0136_G06.b : ATTTCTTGGCCGCCTTGTATAATCCCTTTGGAAATTTCAAACCGCACTTACAGAAACTGT
20110601C-013594 : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
---------+---------+---------+---------+---------+---------+ 743
OVRT1_0096_H07.b : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
LNG01_0079_A10.b : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
AMP01_0017_A11.b : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
OVRM1_0166_E11.b : GTGATGGTATCNACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
KDN01_0083_B11.b : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
OVRT1_0136_G06.b : GTGATGGTATCAACAAAATGTTGGATGAAGATAACATATGAGCATGTGAGTTAGGATTGT
20110601C-013594 : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGATTTATGAAGGAAAAAAATAATG
---------+---------+---------+---------+---------+---------+ 803
OVRT1_0096_H07.b : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGATTTATGAAGGAAAAAAATAATG
LNG01_0079_A10.b : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGAATTATGAAAGAAAAAAATATGT
AMP01_0017_A11.b : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGATTTATGAAGGAAA*AAATAATG
OVRM1_0166_E11.b : GACTGCTCATGATTTACTGGAAGGAGGA
KDN01_0083_B11.b : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGATTTATGAAGGAAAAAAATAATG
OVRT1_0136_G06.b : GACTGCTCATGATTTACTGGAAGGAGGAACACTGCTGATTTATGAAGGAAA*AAATAATG
20110601C-013594 : TTTTAGAGATTATGCATATTTCAGAAAGACTTTGTGTAATTCAGTTGTCTGACATCAATG
---------+---------+---------+---------+---------+---------+ 863
OVRT1_0096_H07.b : TTTTAGAGATTATGCATATTTCAGAAAGACTTTGTGTAATTTCAGTGTCTGACATCAATG
LNG01_0079_A10.b : TTTTAA**GATATGCATATTTCAGAAAGACTTTGTGTAATTCAGTTGTCTGACATCAATG
AMP01_0017_A11.b : TTTTAGAGGGTATGCATATTTCAGAAAGAC*TTGTGTAATTCAGTTGTCTGACATCAATG
OVRM1_0166_E11.b :
KDN01_0083_B11.b : TTTTAGAGATTATGCATATTTCAGAAAGACTTTGTGTAATTCAGTTGTCTGACATCAATG
OVRT1_0136_G06.b : TTTTAGAGATTATGCATATTTCAGAAAGACTTTGTGTTATTCAGTTGTCTGACATCAATG
20110601C-013594 : ACAATGCTTGATAAGGCTTGTTCTATTTGAAGAAATGCATAATGCCAAAAATTCT*GGTA
---------+---------+---------+---------+---------+---------+ 922
OVRT1_0096_H07.b : ACAATGCTTGATAAGGCTTGTTCTATTTTGAGAAATGCATAATGCCCAAAATTCTTGGTA
LNG01_0079_A10.b : ACAATGCTTGATAAGGCTTGTTCTATTTAAA*AAATGCATAATGCCAAAAATctggtaaa
AMP01_0017_A11.b : ACAATGCTTGATAAGGCTTGTTCTATTTGAAGAAATGCATAATGCCAAAAATTCTGGGTA
OVRM1_0166_E11.b :
KDN01_0083_B11.b : ACAATGCTTGATAAGGCTTGTTCTATTTGAAGAAATGCATAATGCCAAAAATTCT*GGTN
OVRT1_0136_G06.b : ACAATGCTTGATAAGGCTTGTTCTATTTGAAGAAATGCATAATGCCAAAAATTCTTGGTA
20110601C-013594 : AAAAGCTTCCCAGAGGTTAATAGATCACAGAAAAACCGTATGGTTATATAATGCCCAACT
---------+---------+---------+---------+---------+---------+ 982
OVRT1_0096_H07.b : AAAAGCTTCCCAGAGGTTAATAatcacagaaaaagcgtaggttattatatgccaactagg
LNG01_0079_A10.b : accttcccagagttaataaatcacaaaaaaacgtatgttatataatgccaaacaaagttt
AMP01_0017_A11.b : AAAGCTTcccgaagtttataaattccaaaaaaagcgtagggttatttaaggccaaacctg
OVRM1_0166_E11.b :
KDN01_0083_B11.b : AAAAGCTTCCCAGAGGTTAATAGATCACAGAAAAAGCGTATGGTTATATAATGCCCAACT
OVRT1_0136_G06.b : AAAAGCTTCCCAGAGTTAATTAAATCACAGAAAAACCGTATGGTTATATAtggccaacct
20110601C-013594 : AGAGTTATATAAAGAAAA..........................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : tttttttaagaaaaatagtttgactcccagccaaagacatctttctagggcagttggtgg
LNG01_0079_A10.b : tataagaaaataaatttacttcaagccaaaaaatctttctaggcatttttgtttgtaaca
AMP01_0017_A11.b : agttttataaagaaaaaataacatggctcccagccccagaattcttttgtaaggcgattt
OVRM1_0166_E11.b :
KDN01_0083_B11.b : AGAGTTATATAAAGAAAAatagatatgactcccagccccaagacatctttcgtagggcag
OVRT1_0136_G06.b : gagttatataagaaaaataatttgactccagcccaaagaattctttctaaggcgttgttg
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : gttgtacaaatggctattttcaacggaacgaaatggggattggaatcccttattccaaac
LNG01_0079_A10.b : aatggccattctaactgaagaattgtaattgattccctttaccctacaagacagtacccc
AMP01_0017_A11.b : ttggtgtggtagccattggcaattt
OVRM1_0166_E11.b :
KDN01_0083_B11.b : ttgttgtgttggaagcaatttggctattttcaacggtacagaattgggaatttgaatccc
OVRT1_0136_G06.b : gttggtaacaattggctttttcaagtggacgaatgtggatttgaatcccttattcctaaa
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : aagacggacaccctttaaaccaaaaaccccccaaaaaattttctgttaaaaatcccttta
LNG01_0079_A10.b : tttaaagccagaactccctaaaaatttctctttgaaaaatcctttcagttactttcttaa
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b : cttttattcctaacaaggaaggggaacctcttttaaaaagaccaagaacccccccttaca
OVRT1_0136_G06.b : aggacgggacccttttaaaaacaaaaactcccttaaaaattttttttggaaaattccttt
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : aagtacctttctaaaattttggaaaaattttcttgccctcaaatcccttaaataaaattg
LNG01_0079_A10.b : ttttttaaaaattttctgacctcaaatccctaaaataacattaaatagggtcaaggaccc
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b : aattttcttcctttgaaaaaattccctttttcaagttaacctttcctaaaagttttttgg
OVRT1_0136_G06.b : caggttaccttctaaagtttttttaaaaattgtctcgcccccaaatcccccaaaataaat
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : aaatagggccccaggccccccaaaaaaaccccctccgaaatttggaaaccctttatttgg
LNG01_0079_A10.b : caaaaaaaacgctcccgacatttaaccacttttatttaaaaccaaaaattcttaaaaaaa
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b : gtaagaattttggcatgtgaccttcaaaaatccttcttaaaaattaaaaatttgaaaaat
OVRT1_0136_G06.b : taaaaagggcgccggggccccaaaaaaaaccttctcgccaattggacccgtgtttttggg
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b : aacacaaaaggggtggaagactggtt
LNG01_0079_A10.b : aaattttcgggtggccctaactagaataa
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b : tagggcaacccaagtgaacccctccaaatatagaaaacggcttctccgggaaacaaagtt
OVRT1_0136_G06.b : aaacaaaagtggtggtggggggtgtgtaaaaaataaaaaacccccccccccgcgggggtg
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b :
LNG01_0079_A10.b :
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b : ggaaaacaacgtgtt
OVRT1_0136_G06.b : tttttaaaactcttttttatannnnccccaaaaaaaaaaannnnnanaattctcaagacc
20110601C-013594 : ............................................................
---------+---------+---------+---------+---------+---------+ 1000
OVRT1_0096_H07.b :
LNG01_0079_A10.b :
AMP01_0017_A11.b :
OVRM1_0166_E11.b :
KDN01_0083_B11.b :
OVRT1_0136_G06.b : atattat