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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013772

Length: 2,439

Sequence [FASTA format sequence]
TTTTGCCGGG GTTTGAATGT GAGGTGGAGC GGCAGTAGGA GTGGGTAGTG CTGGCTGCCG
TCCGCGGCTG AGAGTCCCTT CTCCGTTCCC GTATCCCCAC GAGGTTCTAT GGCAATGGAG
CTCAGCGATG CAAATTTGCA AACACTAACA GAATATTTAA AGAAAACCCT TGATCCTGAT
CCTACAATCA GACGTCCAGC TGAGAAGTTT CTTGAATCTG TAGAAGGAAA TCAGAATTAT
CCACTATTGC TGTTAACATT ACTGGAGAAG TCCCAGGATA ATGTTATCAA AGTGTGTGCT
TCAGTAACAT TCAAGAACTA TATTAAAAGG AACTGGAGAA TTGTTGAAGA CGAACCGAAC
AAAATTTGTG AAGCTGATCG AGTGGCCATT AAAGCCAACA TCGTGCACTT GATGCTTAGC
AGCCCGGAGC AAATTCAGAA GCAGTTAAGT GATGCCATTA GCATTATTGG CAGAGAAGAT
TTCCCTCAGA AATGGCCTGA CTTGTTGACA GAAATGGTGA ATCGCTTTCA GAGTGGAGAT
TTCCATGTTA TTAACGGAGT CCTCCGTACA GCACACTCCT TGTTTAAAAG ATACCACCAT
GAATTTAAGT CAAACGAGTT ATGGACTGAA ATTAAACTTG TTTTGGATGC CTTGCTTTGC
CTTTGACTAA TCTGTTTAAG GCTACTATTG AACTCTGCAG CACCCATGCA AATGATGCCT
CTGCCCTGAG GATTCTTTTT TCTTCCCTGA TTCTGATATC AAAACTGTTT TACAGTTTAA
ACTTTCAGGA TCTCCCTGAA TTTTTTGAAG ATAATATGGA AACTTGGATG AATAATTTTC
ATACCCTCTT GACATTAGAT AATAAGCTTC TACAAACTGA CGATGAAGAA GAAGCAGGCT
TATTGGAACT CTTAAAATCC CAGATTTGTG ATAATGCCGC ACTCTATGCA CAAAAATATG
ATGAAGAGTT TCAACGGTAC CTGCCTCGTT TTGTCACAGC CATCTGGAAT TTACTAGTTA
CAACAGGTCA AGAGGTTAAA TATGACTTGT TGGTAAGTAA TGCAATTCAG TTTCTGGCTT
CGGTTTGTGA GAGACCTCAC TATAAGAATC TATTTGAGGA CCAGAACACG CTGACAAGTA
TCTGTGAAAA GGTTATTGTG CCTAACATGG AATTTAGAGC TGCTGATGAA GAAGCCTTTG
AAGATAATTC TGAGGAGTAC ATAAGAAGAG ATTTGGAAGG GTCTGATATT GATACTAGAC
GCAGGGCTGC TTGTGATCTA GTACGAGGAT TATGCAAGTT TTTTGAGGGC CCCGTGACAG
GAATCTTCTC TGGTTATGTT AACTCCATGC TGCAGGAATA TGCAAAAAAT CCGTCTGTCA
ACTGGAAACA CAAAGATGCA GCCATTTACC TAGTGACATC TTTGGCATCG AAAGCCCAAA
CACAGAAGCA TGGAATTACA CAAGCGAATG AACTTGTAAA CCTGACTGAG TTCTTTGTAA
ATCACATTCT TCCTGATTTA AAGTCAGCTA ATGTGAATGA ATTTCCTGTC CTTAAAGCTG
ATGGTATCAA ATACATTATG ATTTTTAGGA ATCAGGTACC AAAAGAGCAT CTTTTAGTTT
CTATTCCTCT GTTGATTAAT CATCTTCAAG CTGAAAGTAT TGTTGTTCAT ACTTACGCTG
CACATGCTCT TGAGAGACTG TTTACTATGA GAGGGCCTAA CAACGCCACT CTCTTTACAG
CTGCAGAAAT CGCACCGTTT GTTGAGATTC TGCTAACAAA CCTTTTCAAA GCTCTCACAC
TTCCTGGCTC TTCAGAAAAT GAATATATTA TGAAAGCTAT CATGAGAAGT TTTTCCCTTC
TACAAGAAGC CATAATCCCC TACATCCCTA CTCTCATCAC ACAGCTTACA CAGAAGCTAT
TAGCTGTTAG TAAGAACCCA AGCAAACCTC ACTTTAATCA CTATATGTTT GAAGCAATAT
GTTTATCCAT AAGAATAACT TGCAAGGCTA ACCCTGCTGC TGTTGTAAAT TTCGAGGAGG
CTTTGTTTCT GGTGTTTACT GAAATTTTAC AAAATGATGT ACAAGAATTT ATTCCGTATG
TCTTTCAAGT GATGTCTTTG CTTCTGGAAA CACACAAAAA TGACATCCCA TCTTCCTATA
TGGCCTTATT TCCTCATCTC CTTCAGCCAG TGCTTTGGGA AAGAACAGGA AATATTCCTG
CTCTAGTGAG GCTTTCTCCA GCATTCTTAG AACGAGGTTC ANNNATACAT AGCAGTGCTG
CAGCTGACAA AATCCCTGGG TTTGTANGTG TCTTTCAGAA GCTGATTGCA TCCAAAGCAA
TGACCACCNA GGTTTTATCT TTCTAACAGT ATAATAGAGC ACATGCCTCC TGAGTCAGTT
GACCAGTACA GGAAGCAAAA TCTCATTCTG CTATTCCAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCSE1Lexportin-2 [Homo sapiens]. 9990.0O
Contig/Assembly ProteinIPO7importin-7 [Homo sapiens]. 622e-09O
Contig/Assembly ProteinIPO9importin-9 [Homo sapiens]. 57.46e-08O
Contig/Assembly ProteinIPO8importin-8 isoform 1 [Homo sapiens]. 52.42e-06O
Contig/Assembly ProteinIPO11importin-11 isoform 1 [Homo sapiens]. 51.63e-06
Contig/Assembly ProteinIPO11importin-11 isoform 2 [Homo sapiens]. 50.86e-06O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCse1lexportin-2 [Mus musculus]. 9860.0O
Contig/Assembly ProteinIpo7importin-7 [Mus musculus]. 622e-09O
Contig/Assembly ProteinIpo9importin-9 [Mus musculus]. 57.45e-08O
Contig/Assembly ProteinIpo8importin-8 [Mus musculus]. 55.52e-07O
Contig/Assembly ProteinIpo11importin-11 [Mus musculus]. 50.18e-06O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC477257PREDICTED: similar to CSE1 chromosome segregation 1-like protein isoform a isoform 2 [Canis familiaris]. 9940.0O
Contig/Assembly ProteinLOC477257PREDICTED: similar to CSE1 chromosome segregation 1-like protein isoform a isoform 5 [Canis familiaris]. 9590.0O
Contig/Assembly ProteinLOC485383PREDICTED: similar to Importin-7 (Imp7) (Ran-binding protein 7) (RanBP7) isoform 1 [Canis familiaris]. 623e-09O
Contig/Assembly ProteinLOC478073PREDICTED: similar to Ran binding protein 11 isoform 2 [Canis familiaris]. 52.42e-06O
Contig/Assembly ProteinLOC478073PREDICTED: similar to Ran binding protein 11 isoform 1 [Canis familiaris]. 52.42e-06O
Contig/Assembly ProteinLOC612863PREDICTED: similar to importin 8 isoform 2 [Canis familiaris]. 51.25e-06O
Contig/Assembly ProteinLOC612863PREDICTED: similar to importin 8 isoform 4 [Canis familiaris]. 51.25e-06O
Contig/Assembly ProteinLOC612863PREDICTED: similar to importin 8 isoform 1 [Canis familiaris]. 51.25e-06O
Contig/Assembly ProteinLOC480004PREDICTED: similar to importin 9 [Canis familiaris]. 50.48e-06O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCSE1Lexportin-2 [Bos taurus]. 9930.0O
Contig/Assembly ProteinIPO7PREDICTED: importin 7-like [Bos taurus]. 622e-09O
Contig/Assembly ProteinIPO7importin-7 [Bos taurus]. 622e-09O
Contig/Assembly ProteinIPO8importin-8 [Bos taurus]. 522e-06O
Contig/Assembly ProteinIPO11importin-11 [Bos taurus]. 522e-06O
Contig/Assembly ProteinIPO11PREDICTED: importin 11 [Bos taurus]. 522e-06O
Contig/Assembly ProteinIPO8PREDICTED: importin 7-like [Bos taurus]. 522e-06O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCSE1Lexportin-2 [Sus scrofa]. 9960.0O
Contig/Assembly ProteinLOC100626186PREDICTED: exportin-2-like [Sus scrofa]. 2212e-57O
Contig/Assembly ProteinLOC100525719PREDICTED: importin-11-like [Sus scrofa]. 53.17e-07O
Contig/Assembly ProteinIPO7PREDICTED: importin-7 [Sus scrofa]. 51.62e-06
Contig/Assembly ProteinIPO8PREDICTED: importin-8 isoform 1 [Sus scrofa]. 51.23e-06O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
OVR010020E10OVR01_0020_E10.bBP143381 
OVR010093H10OVR01_0093_H10.bBW967652 
PTG010043C08PTG01_0043_C08.bFS708194 
SKNB10035F09SKNB1_0035_F09.bDB801917 AK397240
TCH010039F03TCH01_0039_F03.bCJ025357 
THY010002H05THY01_0002_H05.bBP168522 AK238591

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
1511C200.400WSCTC/L
T300.600CTT/L


Alignment:      TOP

20110601C-013772 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0020_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : .........................TTTTGCCGGGGTTTGAATGTGAGGTGGAGCGGCAG
---------+---------+---------+---------+---------+---------+ 35
OVR01_0020_E10.b : xxxxxxxxxxxxxxxxxxxxxxxxxTTTTGCCGGGGTTTGAATGTGAGGTGGAGCGGCAG
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : TAGGAGTGGGTAGTGCTGGCTGCCGTCCGCGGCTGAGAGTCCCTTCTCCGTTCCCGTATC
---------+---------+---------+---------+---------+---------+ 95
OVR01_0020_E10.b : TAGGAGTGGGTAGTGCTGGCTGCCGTCCGCGGCTGAGAGTCCCTTCTCCGTTCCCGTATC
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : CCCACGAGGTTCTATGGCAATGGAGCTCAGCGATGCAAATTTGCAAACACTAACAGAATA
---------+---------+---------+---------+---------+---------+ 155
OVR01_0020_E10.b : CCCACGAGGTTCTATGGCAATGGAGCTCAGCGATGCAAATTTGCAAACACTAACAGAATA
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : TTTAAAGAAAACCCTTGATCCTGATCCTACAATCAGACGTCCAGCTGAGAAGTTTCTTGA
---------+---------+---------+---------+---------+---------+ 215
OVR01_0020_E10.b : TTTAAAGAAAACCCTTGATCCTGATCCTACAATCAGACGTCCAGCTGAGAAGTTTCTTGA
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ATCTGTAGAAGGAAATCAGAATTATCCACTATTGCTGTTAACATTACTGGAGAAGTCCCA
---------+---------+---------+---------+---------+---------+ 275
OVR01_0020_E10.b : ATCTGTAGAAGGAAATCAGAATTATCCACTATTGCTGTTAACATTACTGGAGAAGTCCCA
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : GGATAATGTTATCAAAGTGTGTGCTTCAGTAACATTCAAGAACTATATTAAAAGGAACTG
---------+---------+---------+---------+---------+---------+ 335
OVR01_0020_E10.b : GGATAATGTTATCAAAGTGTGTGCTTCAGTAACATTCAAGAACTATATTAAAAGGAACTG
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : GAGAATTGTTGAAGACGAACCGAACAAAATTTGTGAAGCTGATCGAGTGGCCATTAAAGC
---------+---------+---------+---------+---------+---------+ 395
OVR01_0020_E10.b : GAGAATTGTTGAAGACGAACCGAACAAAATTTGTGAAGCTGATCGAGTGGCCATTAAAGC
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : CAACATCGTGCACTTGATGCTTAGCAGCCCGGAGCAAATTCAGAAGCAGTTAAGTGATGC
---------+---------+---------+---------+---------+---------+ 455
OVR01_0020_E10.b : CAACATCGTGCACTTGATGCTTAGCAGCCCGGAGCAAATTCAGAAGCAGTTAAGTGATGC
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : CATTAGCATTATTGGCAGAGAAGATTTCCCTCAGAAATGGCCTGACTTGTTGACAGAAAT
---------+---------+---------+---------+---------+---------+ 515
OVR01_0020_E10.b : CATTAGCATTATTGGCAGAGAAGATTTCCCTCAGAAATGGCCTGACTTGTTGACAGAAAT
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : GGTGAATCGCTTTCAGAGTGGAGATTTCCATGTTATTAACGGAGTCCTCCGTACAGCACA
---------+---------+---------+---------+---------+---------+ 575
OVR01_0020_E10.b : GGTGAATCGCTTTCAGAGTGGAGATTTCCATGTTATTAACGGAGTCCTCCGTACAGCACA
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : CTCCTTGTTTAAAAGATACCACCATGAATTTAAGTCAAACGAGTTATGGACTGAAATTAA
---------+---------+---------+---------+---------+---------+ 635
OVR01_0020_E10.b : CTCCTTGTTTAAAAGATACCACCATGAATTTAAGTCAAACGAGTTATGGACTGAAATTAA
SKNB1_0035_F09.b : nttttttggctgtggc
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ACTTGTTTTGGATGCCTTGCTTTGCCTTTGACTAATCTGTTTAAGGCTACTATTGAACTC
---------+---------+---------+---------+---------+---------+ 695
OVR01_0020_E10.b : ACTTGTTTTGGATGCCTTGCTTTGCCTTTGACTAATCTGTTTAAGGCTACTATTGAACTC
SKNB1_0035_F09.b : tatggtttggatgcctTTGCTTTGCCTTTGA*TAATCTGTTTAAGGCTACTATTGAACTC
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : TGCAGCACCCATGCAAATGATGCCTCTGCCCTGAGGATTCTTTTTTCTTCCCTGATTCTG
---------+---------+---------+---------+---------+---------+ 755
OVR01_0020_E10.b : TGCAGCACCCATGCAAATGATGCCTCTGCCCTGAGGATTCTTTTTTCTTCCCTGATTCTG
SKNB1_0035_F09.b : TGCAGCACCCATGCAAATGATGCCTCTGCCCTGAGGATTCTTTTTTCTTCCCTGATTCTG
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ATATCAAAACTGTTTTACAGTTTAAACTTTCAGGATCTCCCTGAATTTTTTGAAGATAAT
---------+---------+---------+---------+---------+---------+ 815
OVR01_0020_E10.b : ATCTCAAAACTGTTTTACAGTTTAAACTTTCAGGATCTCCCTGAATTTTTTGAAGATAAT
SKNB1_0035_F09.b : ATATCAAAACTGTTTTACAGTTTAAACTTTCAGGATCTCCCTGAATTTTTTGAAGATAAT
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ATGGAAACTTGGATGAATAATTTTCATACCCTCTTGACATTAGATAATAAGCTTCTACAA
---------+---------+---------+---------+---------+---------+ 875
OVR01_0020_E10.b : ATGGAAACTTGGATGAATAATTTTCATACCCTCTTGACATAAGATAATAAGCTTCTACAA
SKNB1_0035_F09.b : ATGGAAACTTGGATGAATAATTTTCATACCCTCTTGACATTAGATAATAAGCTTCTACAA
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ACTGACGATGAAGAAGAAGCAGGCTTATTGGAACTCTTAAAATCCCAGATTTGTGATAAT
---------+---------+---------+---------+---------+---------+ 935
OVR01_0020_E10.b : ACTGACGATGAAGAAGAAGCAAGCTTATTGGAACTCTTAAAATCCCAGATTTGTGATATT
SKNB1_0035_F09.b : ACTGACGATGAAGAAGAAGCAGGCTTATTGGAACTCTTAAAATCCCAGATTTGTGATAAT
THY01_0002_H05.b : caxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : GCCGCACTCTATGCACAAAAATATGATGAAGAGTTTCAACGGTACCTGCCTCGTTTTGTC
---------+---------+---------+---------+---------+---------+ 995
OVR01_0020_E10.b : GCTGCACTCTATGCACAAAAATAGAATAAAAAGTTTCAACGGaccctggcttctttttgt
SKNB1_0035_F09.b : GCCGCACTCTATGCACAAAAATATGATGAAGAGTTTCAACGGTACCTGCCTCGTTTTGTC
THY01_0002_H05.b : xxxxxxxxxxxxxxxxxxxxxTATGATGAAGAGTTTCAACGGTACCTGCCTCGTTTTGTC
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : ACAGCCATCTGGAATTTACTAGTTACAACAGGTCAAGAGGTTAAATATGACTTGTTGGTA
---------+---------+---------+---------+---------+---------+ 1055
OVR01_0020_E10.b : ccaaccattttggaatttacttaattacaaccggggtcaaaaaggttaaaatatgaattt
SKNB1_0035_F09.b : ACAGCCATCTGGAATTTACTAGTTACAACAGGTCAAGAGGTTAAATATGACTTGTTGGTA
THY01_0002_H05.b : ACAGCCATCTGGAATTTACTAGTTACAACAGGTCAAGAGGTTAAATATGACTTGTTGGTA
PTG01_0043_C08.b : ncgttttttnnnnggagta
OVR01_0093_H10.b :
TCH01_0039_F03.b :
20110601C-013772 : AGTAATGCAATTCAGTTTCTGGCTTCGGTTTGTGAGAGACCTCACTATAAGAATCTATTT
---------+---------+---------+---------+---------+---------+ 1115
OVR01_0020_E10.b : ggttgggaaagtaaatgcaaatttcagtttttctgggcttttgggtttttttgaaaaaaa
SKNB1_0035_F09.b : AGTAATGCAATTCAGTTTCTGGCTTCGGTTTGTGAGAGACCTCACTATAAGAATCTATTT
THY01_0002_H05.b : AGTAATGCAATTCAGTTTCTGGCTTCGGTTTGTGAGAGACCTCACTATAAGAATCTATTT
PTG01_0043_C08.b : agcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTAAGAATCTATTT
OVR01_0093_H10.b : nnnggctaggactataacxxxxx
TCH01_0039_F03.b :
20110601C-013772 : GAGGACCAGAACACGCTGACAAGTATCTGTGAAAAGGTTATTGTGCCTAACATGGAATTT
---------+---------+---------+---------+---------+---------+ 1175
OVR01_0020_E10.b : actttcccctaataaaaaaattcttttttttttgggggaacccaaaaaaacccccccctt
SKNB1_0035_F09.b : GAGGACCAGAACACGCTGACAAGTATCTGTGAAAAGGTTATTGTGCCTAACATGGAATTT
THY01_0002_H05.b : GAGGACCAGAACACGCTGACAAGTATCTGTGAAAAGGTTATTGTGCCTAACATGGAATTT
PTG01_0043_C08.b : GAGGACCAGAACACGCTGACAAGTATCTGTGAAAAGGTTATTGTGCCTAACATGGAATTT
OVR01_0093_H10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTT
TCH01_0039_F03.b :
20110601C-013772 : AGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATTTG
---------+---------+---------+---------+---------+---------+ 1235
OVR01_0020_E10.b : ttaaaacacaaaaaattttttttt
SKNB1_0035_F09.b : AGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATTTG
THY01_0002_H05.b : AGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATTTG
PTG01_0043_C08.b : AGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATTTG
OVR01_0093_H10.b : AGAGCTGCTGATGAAGAAGCCTTTGAAGATAATTCTGAGGAGTACATAAGAAGAGATTTG
TCH01_0039_F03.b :
20110601C-013772 : GAAGGGTCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTACGAGGATTATGC
---------+---------+---------+---------+---------+---------+ 1295
OVR01_0020_E10.b :
SKNB1_0035_F09.b : GAAGGGTCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTACGAGGATTATGC
THY01_0002_H05.b : GAAGGGTCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTACGAGGATTATGC
PTG01_0043_C08.b : GAAGGGTCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTACGAGGATTATGC
OVR01_0093_H10.b : GAAGGGTCTGATATTGATACTAGACGCAGGGCTGCTTGTGATCTAGTACGAGGATTATGC
TCH01_0039_F03.b :
20110601C-013772 : AAGTTTTTTGAGGGCCCCGTGACAGGAATCTTCTCTGGTTATGTTAACTCCATGCTGCAG
---------+---------+---------+---------+---------+---------+ 1355
OVR01_0020_E10.b :
SKNB1_0035_F09.b : AAGTTTTTTGAGGGCCCCGTGACAGGAATCTTCTCTGGTTATGTTAACTCCATGCTGCAG
THY01_0002_H05.b : AAGTTTTTTGAGGGCCCCGTGACAGGAATCTTCTCTGGTTATGTTAACTCCATGCTGCAG
PTG01_0043_C08.b : AAGTTTTTTGAGGGCCCCGTGACAGGAATCTTCTCTGGTTATGTTAACTCCATGCTGCAG
OVR01_0093_H10.b : AAGTTTTTTGAGGGCCCCGTGACAGGAATCTTCTCTGGTTATGTTAACTCCATGCTGCAG
TCH01_0039_F03.b :
20110601C-013772 : GAATATGCAAAAAATCCGTCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTAGTG
---------+---------+---------+---------+---------+---------+ 1415
OVR01_0020_E10.b :
SKNB1_0035_F09.b : GAATATGCAAAAAATCCGTCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTAGTG
THY01_0002_H05.b : GAATATGCAAAAAATCCGTCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTAGTG
PTG01_0043_C08.b : GAATATGCAAAAAATCCGTCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTAGTG
OVR01_0093_H10.b : GAATATGCAAAAAATCCGTCTGTCAACTGGAAACACAAAGATGCAGCCATTTACCTAGTG
TCH01_0039_F03.b : nnnnggctaggactataacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013772 : ACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGAATTACACAAGCGAATGAACTT
---------+---------+---------+---------+---------+---------+ 1475
OVR01_0020_E10.b :
SKNB1_0035_F09.b : ACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGAATTACACAAGCGAATGAACTT
THY01_0002_H05.b : ACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGAATTACACAAGCGAATGAACTT
PTG01_0043_C08.b : ACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGAATTACACAAGCGAATGAACTT
OVR01_0093_H10.b : ACATCTTTGGCATCGAAAGCCCAAACACAGAAGCATGGAATTACACAAGCGAATGAACTT
TCH01_0039_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxgAGAAGCATGGAATTACACAAGCGAATGAACTT
20110601C-013772 : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTTCCTGATTTAAAGTCAGCTAATGTG
---------+---------+---------+---------+---------+---------+ 1535
OVR01_0020_E10.b :
SKNB1_0035_F09.b : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTCCCTGATTTAA*GTCAGCTAATGTG
THY01_0002_H05.b : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTTCCTGATTTAAAGTCAGCTAATGTG
PTG01_0043_C08.b : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTTCCTGATTTAAAGTCAGCTAATGTG
OVR01_0093_H10.b : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTCCCTGATTTAAAGTCAGCTAATGTG
TCH01_0039_F03.b : GTAAACCTGACTGAGTTCTTTGTAAATCACATTCTTCCTGATTTAAAGTCAGCTAATGTG
20110601C-013772 : AATGAATTTCCTGTCCTTAAAGCTGATGGTATCAAATACATTATGATTTTTAGGAATCAG
---------+---------+---------+---------+---------+---------+ 1595
OVR01_0020_E10.b :
SKNB1_0035_F09.b : AATGAATTTCCTGTCCCTTAAGCTGATGGTATC*AATACATTATGAATTTTANGAATCAN
THY01_0002_H05.b : AATGAATTTCCTGTCCTTAAAGCTGATGGTATCAAATACATTATGATTTTTAGGAATCAG
PTG01_0043_C08.b : AATGAATTTCCTGTCCTTAAAGCTGATGGTATCAAATACATTATGATTTTTAGGAATCAG
OVR01_0093_H10.b : AATGAATTTCCTGTCCTTAAAGCTGATGGTATCAAATACATTATGATTTTTAGGAATCAG
TCH01_0039_F03.b : AATGAATTTCCTGTCCTTAAAGCTGATGGTATCAAATACATTATGATTTTTAGGAATCAG
20110601C-013772 : GTACCAAAAGAGCATCTTTTAGTTTCTATTCCTCTGTTGATTAATCATCTTCAAGCTGAA
---------+---------+---------+---------+---------+---------+ 1655
OVR01_0020_E10.b :
SKNB1_0035_F09.b : GTAC*AAAAGAGCATCTTTTAtctctatcccctctgtgatatcatcntcagctgaaaagt
THY01_0002_H05.b : GTACCAAAAGAGCATCTTTTAGCTTCTATTCCTCTGNTGATTAATCATCTTTCAGCTCGA
PTG01_0043_C08.b : GTACCAAAAGAGCATCTTTTAGTTTCTATTCCTCTGTTGATTAATCATCTTCAAGCTGAA
OVR01_0093_H10.b : GTACCAAAAGAGCATCTTTTAGTCTCTATTCCTCTGTTGATTAATCATCTTCAAGCTGAA
TCH01_0039_F03.b : GTACCAAAAGAGCATCTTTTAGTTTCTATTCCTCTGTTGATTAATCATCTTCAAGCTGAA
20110601C-013772 : AGTATTGTTGTTCATACTTACGCTGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGG
---------+---------+---------+---------+---------+---------+ 1715
OVR01_0020_E10.b :
SKNB1_0035_F09.b : atggttgtcatactacgctgcaatgctcttgagagatgtttactatgagagggctaacac
THY01_0002_H05.b : AGTATTGTTGTTCATACTTACGCTGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGG
PTG01_0043_C08.b : AGTATTGTTGTTCATACTTACGCTGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGG
OVR01_0093_H10.b : AGTATTGTTGTTCATACTTACGCTGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGG
TCH01_0039_F03.b : AGTATTGTTGTTCATACTTACGCTGCACATGCTCTTGAGAGACTGTTTACTATGAGAGGG
20110601C-013772 : CCTAACAACGCCACTCTCTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATTCTGCTA
---------+---------+---------+---------+---------+---------+ 1775
OVR01_0020_E10.b :
SKNB1_0035_F09.b : gccctctcttacgntgcgaaatcgaaccgttgttgagatctgctaaaaacttttcagctt
THY01_0002_H05.b : CCTACCCACGCCACTCTCTTTACAGCTGCAGAAATCCCACCGTTTTGTGAGATCCTGCTA
PTG01_0043_C08.b : CCTAACAACGCCACTCTCTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATTCTGCTA
OVR01_0093_H10.b : CCTAACAACGCCACTCTCTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATTCTGCTA
TCH01_0039_F03.b : CCTAACAACGCCACTCTCTTTACAGCTGCAGAAATCGCACCGTTTGTTGAGATTCTGCTA
20110601C-013772 : ACAAACCTTTTCAAAGCTCTCACACTTCCTGGCTCTTCAGAAAATGAATATATTATGAAA
---------+---------+---------+---------+---------+---------+ 1835
OVR01_0020_E10.b :
SKNB1_0035_F09.b : caacctctggtctccaaatgaatattataagcttccggaaagtttccttcaaaagccata
THY01_0002_H05.b : CCAAACCTTTcaagatctcacacttcctgggtcttcagaaatgaatatatatgaaagcta
PTG01_0043_C08.b : ACAAACCTTTTCNAAGCTCTCACACTTCCTGGCTCTTCAGAAAATGAATATATTATGAAA
OVR01_0093_H10.b : ACAAACCTTTTCAAAACTCTCACACTTCCTGGCTCTTCAGAAAATGAATATATTATGAAA
TCH01_0039_F03.b : ACAAACCTTTTCAAAGCTCTCACACTTCCTGGCTCTTCAGAAAATGAATATATTATGAAA
20110601C-013772 : GCTATCATGAGAAGTTTTTCCCTTCTACAAGAAGCCATAATCCCCTACATCCCTACTCTC
---------+---------+---------+---------+---------+---------+ 1895
OVR01_0020_E10.b :
SKNB1_0035_F09.b : ccttatcctctttccacattacaaacttaatgtgttaacccgaacctttt
THY01_0002_H05.b : tctgancagtttttccttctacaaagccataatc
PTG01_0043_C08.b : GCTATCATGAGAAGTTTTTCCCTTCTACAAGAAGCCCATATCCCCTACATCCCTACTCTC
OVR01_0093_H10.b : GCTATCATGAGAAGTTTTTCCCTTCTACAAGAAGCCATAATCCCCTACATCCCTACTCTC
TCH01_0039_F03.b : GCTATCATGAGAAGTTTTTCCCTTCTACAAGAAGCCATAATCCCCTACATCCCTACTCTC
20110601C-013772 : ATCACACAGCTTACACAGAAGCTATTAGCTGTTAGTAAGAACCCAAGCAAACCTCACTTT
---------+---------+---------+---------+---------+---------+ 1955
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : ATCACACAGCTTACACAGAAGCTATTAGCTGT*TAGTAAAAACCAAGCAAACCTCACTTT
OVR01_0093_H10.b : ATCACACAGCTTACACAGAAGCTATTAGCTGTTTAGTAGAACCCNAGCAAACCTCACTTT
TCH01_0039_F03.b : ATCACACAGCTTACACAGAAGCTATTAGCTGTTAGTAAGAACCCAAGCAAACCTCACTTT
20110601C-013772 : AATCACTATATGTTTGAAGCAATATGTTTATCCATAAGAATAACTTGCAAGGCTAACCCT
---------+---------+---------+---------+---------+---------+ 2015
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : AATCACTATTTGTTTGAAAGCATATGTTTATCCATAAAAAATACTTGCAAGGGTAACCCT
OVR01_0093_H10.b : AATCACTATATGTTTGAAGCAATATGTTTATCCCATAGAATAACTTGCCAGGCTACCCCT
TCH01_0039_F03.b : AATCACTATATGTTTGAAGCAATATGTTTATCCATAAGAATAACTTGCAAGGCTAACCCT
20110601C-013772 : GCTGCTGTTGTAAATTTCGAGGAGGCTTTGTTTCTGGTGTTTACTGAAATTTTACAAAAT
---------+---------+---------+---------+---------+---------+ 2075
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : GCTGCTGTTGTAAATTTCAAGGAGGCT*TTGTTTCggtgtttactggatttttccaaaag
OVR01_0093_H10.b : GCTGCTGNTGTAAATTTCCAGGAGGCT*TGTTTCTGGTGTTTACTGAAATTTTACA*AAT
TCH01_0039_F03.b : GCTGCTGTTGTAAATTTCGAGGAGGCTTTGTTTCTGGTGTTTACTGAAATTTTACAAAAT
20110601C-013772 : GATGTACAAGAATTTATTCCGTATGTCTTTCAAGTGATGTCTTTGCTTCTGGAAACACAC
---------+---------+---------+---------+---------+---------+ 2135
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : atgtaacagatttatttcgtatgcctttcaaggaagtcttgcttccggaaaccacaaaag
OVR01_0093_H10.b : GATGTACAAGAATTTATTCCGTATGTCTTTCAAGTGAGGTCTTTGCTTCTGGgaaccccc
TCH01_0039_F03.b : GATGTACAAGAATTTATTCCGTATGTCTTTCAAGTGATGTCTTTGCTTCTGGAAACACAC
20110601C-013772 : AAAAATGACATCCCATCTTCCTATATGGCCTTATTTCCTCATCTCCTTCAGCCAGTGCTT
---------+---------+---------+---------+---------+---------+ 2195
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : gaatcccctctcccaatgggcctatttccccaccctttaccagggtttgggaaaaaaaga
OVR01_0093_H10.b : caaaaaggacttcccatcctccccaaaagggccttaattcccccatttcctttaagccag
TCH01_0039_F03.b : AAAAATGACATCCCATCTTCCTATATGGCCTTATTTCCTCATCTCCTTCAGCCAGTGCTT
20110601C-013772 : TGGGAAAGAACAGGAAATATTCCTGCTCTAGTGAGGCTTTCTCCAGCATTCTTAGAACGA
---------+---------+---------+---------+---------+---------+ 2255
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : aatattcgggcctaggggggttccccgatttttaaaaaaggttaataaataaggggtggc
OVR01_0093_H10.b : ggccttttgggaaaggaccgggaaatatttcctgcctcaagtgaaggctcttccaagcct
TCH01_0039_F03.b : TGGGAAAGAACAGGAAATATTCCTGCTCTAGTGAGGCTTTCTCCAGCATTCTTAGAACGA
20110601C-013772 : GGTTCANNNATACATAGCAGTGCTGCAGCTGACAAAATCCCTGGGTTTGTANGTGTCTTT
---------+---------+---------+---------+---------+---------+ 2315
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : cggaaaaaacccggggggtgagggttttaaaagagtggccccaccaggacccgggtgttt
OVR01_0093_H10.b : ttctaaaaa
TCH01_0039_F03.b : GGTTCANNNATACATAGCAGTGCTGCAGCTGACAAAATCCCTGGGTTTGTANGTGTCTTT
20110601C-013772 : CAGAAGCTGATTGCATCCAAAGCAATGACCACCNAGGTTTTATCTTTCTAACAGTATAAT
---------+---------+---------+---------+---------+---------+ 2375
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : tcttaaaataaaaaaactcctccgttttgcaaagaaagaaatttctttgttcaaataaaa
OVR01_0093_H10.b :
TCH01_0039_F03.b : CAGAAGCTGATTGCATCCAAAGCAATGACCACCNAGGTTTTATCTTTCTAACAGTATAAT
20110601C-013772 : AGAGCACATGCCTCCTGAGTCAGTTGACCAGTACAGGAAGCAAAATCTCATTCTGCTATT
---------+---------+---------+---------+---------+---------+ 2435
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : taaaccccttttgattttttttttttttgtaaaagggcccccgaaatttgggccaagggg
OVR01_0093_H10.b :
TCH01_0039_F03.b : AGAGCACATGCCTCCTGAGTCAGTTGACCAGTACAGGAAGCAAAATCTCATTCTGCTATT
20110601C-013772 : CCAA........................................................
---------+---------+---------+---------+---------+---------+ 2439
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : ggtgggaatctttcacatgagaaaatgggttaaacacaaaaaaaccccccgggnnaagaa
OVR01_0093_H10.b :
TCH01_0039_F03.b : CCAAgacttcgaattcnaaacaccnagtttatcagaagttctaanncttataanttgnat
20110601C-013772 : ............................................................
---------+---------+---------+---------+---------+---------+ 2439
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b : ccaacaaaacacacaac
OVR01_0093_H10.b :
TCH01_0039_F03.b : gcaaaaatacgggcctaccctgcaagaatattgacgtatacacaaaagtttggatgtttg
20110601C-013772 : ............................................................
---------+---------+---------+---------+---------+---------+ 2439
OVR01_0020_E10.b :
SKNB1_0035_F09.b :
THY01_0002_H05.b :
PTG01_0043_C08.b :
OVR01_0093_H10.b :
TCH01_0039_F03.b : naaaatcttatttggattcnaaatttcgggagtaaaaaaaaattgcgttgtaa