Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-013793

Sequence: [FASTA format sequence] ATTCCCGAGC TGCCGCCCTC GTCGCTCGCT CGGTGCTTCC CCGCGGGCCG CGCTCTCCTC CCGACGATGG CGTGCGGCGG GCGCGGTCGC CGCCTGGGGC TGGCTCTGGG GCTGCTGCTG GCGTTGGTGC TGGCGCCCCC AACGCTGAGG GCCAAGCCCA CCGTGCGCAA GGAACGCGTG GTGCGGCCCG ACTCGGAGCT GGGAGAGCGG CCGCCCGAGG ACAATCAGAG CTTCCAGTAC GACCACGAGG CCTTCCTGGG CAAGGAGGAC TCCAAGACCT TCGACCAGCT CACCTCGGAG GAGAGCAAGG AGAGACTGGG GAAGATTGTC GATCGAATCG ACAGTGACGG GGACGGCTTT GTTACCGCTG AGGAGCTGAA AACCTGGATC AAACGGGTGC AGAAGAGATA CATCTACGAT AATGTCGCTA AAGTCTGGAA GGATTATGAT CGGGACAAAG ACGATAAAAT TTCCTGGGAA GAATACAAAC AAGCCACCTA CGGTTACTAC CTAGGAAACC CCACGGAGTT TCATGACACT TCAGATCATC AAACCTTTAA AAAGATGCTG CCACGTGATG AGAGAAGGTT CAAGGCTGCA GACCTCGATG GTGACCAGAC AGCCACCCGT GAGGAGTTCA CTGCCTTTCT GCACCCTGAG GAGTTTGAGC ATATGAAGGA AATTGTGGTT TTGGAAACTC TGGAGGACAT CGACAAGAAC GGGGATGGCT TTGTGGATCA GGACGAGTAT ATTGCCGATA TGTTTTCCCA CGAGGAGGGT GGCCCTGAGC CAGACTGGGT GTTGTCAGAA CGGGAGCAGT TTAATGAATT CCGGGATCTG AACAAGGATG GGAAGCTGGA CAAGGATGAG ATTCGCCACT GGATCCTCCC GCAAGACTAT GACCACGCTC AGGCAGAGGC CAGGCATCTG GTGTA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
RCN1 reticulocalbin-1 precursor [Homo sapiens]. 525 e-149 O

CALU calumenin isoform d precursor [Homo sapiens]. 343 1e-94 O

CALU calumenin isoform b precursor [Homo sapiens]. 343 1e-94 O

CALU calumenin isoform c precursor [Homo sapiens]. 343 2e-94 O

CALU calumenin isoform a precursor [Homo sapiens]. 343 2e-94 O

RCN3 reticulocalbin-3 precursor [Homo sapiens]. 301 6e-82 O

CALU calumenin isoform e precursor [Homo sapiens]. 253 1e-67 O

CALU calumenin isoform f [Homo sapiens]. 190 1e-48 O

RCN2 reticulocalbin-2 precursor [Homo sapiens]. 176 2e-44 O

SDF4 45 kDa calcium-binding protein isoform 2 precursor [Homo sapiens]. 90.1 3e-18 O

Locus	Definition	Score	E value	FL
RCN1	reticulocalbin-1 precursor [Homo sapiens].	525	e-149	O
CALU	calumenin isoform d precursor [Homo sapiens].	343	1e-94	O
CALU	calumenin isoform b precursor [Homo sapiens].	343	1e-94	O
CALU	calumenin isoform c precursor [Homo sapiens].	343	2e-94	O
CALU	calumenin isoform a precursor [Homo sapiens].	343	2e-94	O
RCN3	reticulocalbin-3 precursor [Homo sapiens].	301	6e-82	O
CALU	calumenin isoform e precursor [Homo sapiens].	253	1e-67	O
CALU	calumenin isoform f [Homo sapiens].	190	1e-48	O
RCN2	reticulocalbin-2 precursor [Homo sapiens].	176	2e-44	O
SDF4	45 kDa calcium-binding protein isoform 2 precursor [Homo sapiens].	90.1	3e-18	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Rcn1 reticulocalbin-1 precursor [Mus musculus]. 518 e-147 O

Calu calumenin isoform 2 [Mus musculus]. 341 4e-94 O

Calu calumenin isoform 1 [Mus musculus]. 338 3e-93 O

Rcn3 reticulocalbin-3 precursor [Mus musculus]. 298 4e-81 O

Rcn2 reticulocalbin-2 precursor [Mus musculus]. 174 7e-44 O

Sdf4 45 kDa calcium-binding protein precursor [Mus musculus]. 91.3 1e-18 O

Cetn3 centrin-3 [Mus musculus]. 55.1 8e-08 O

Locus	Definition	Score	E value	FL
Rcn1	reticulocalbin-1 precursor [Mus musculus].	518	e-147	O
Calu	calumenin isoform 2 [Mus musculus].	341	4e-94	O
Calu	calumenin isoform 1 [Mus musculus].	338	3e-93	O
Rcn3	reticulocalbin-3 precursor [Mus musculus].	298	4e-81	O
Rcn2	reticulocalbin-2 precursor [Mus musculus].	174	7e-44	O
Sdf4	45 kDa calcium-binding protein precursor [Mus musculus].	91.3	1e-18	O
Cetn3	centrin-3 [Mus musculus].	55.1	8e-08	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC475952 PREDICTED: similar to Reticulocalbin 1 precursor [Canis familiaris]. 416 e-116

LOC475201 PREDICTED: similar to calumenin precursor isoform 7 [Canis familiaris]. 345 3e-95 O

LOC475201 PREDICTED: similar to calumenin isoform 2 isoform 4 [Canis familiaris]. 345 3e-95 O

LOC475201 PREDICTED: similar to calumenin precursor isoform 2 [Canis familiaris]. 343 1e-94 O

LOC475201 PREDICTED: similar to calumenin precursor isoform 6 [Canis familiaris]. 342 2e-94 O

LOC475201 PREDICTED: similar to calumenin isoform 2 isoform 8 [Canis familiaris]. 342 3e-94 O

LOC475201 PREDICTED: similar to calumenin isoform 2 isoform 3 [Canis familiaris]. 341 5e-94 O

LOC475201 PREDICTED: similar to calumenin precursor isoform 5 [Canis familiaris]. 337 1e-92 O

LOC484379 PREDICTED: similar to reticulocalbin 3, EF-hand calcium binding domain [Canis familiaris]. 307 8e-84 O

LOC487666 PREDICTED: similar to reticulocalbin 2 [Canis familiaris]. 170 2e-42 O

Locus	Definition	Score	E value	FL
LOC475952	PREDICTED: similar to Reticulocalbin 1 precursor [Canis familiaris].	416	e-116
LOC475201	PREDICTED: similar to calumenin precursor isoform 7 [Canis familiaris].	345	3e-95	O
LOC475201	PREDICTED: similar to calumenin isoform 2 isoform 4 [Canis familiaris].	345	3e-95	O
LOC475201	PREDICTED: similar to calumenin precursor isoform 2 [Canis familiaris].	343	1e-94	O
LOC475201	PREDICTED: similar to calumenin precursor isoform 6 [Canis familiaris].	342	2e-94	O
LOC475201	PREDICTED: similar to calumenin isoform 2 isoform 8 [Canis familiaris].	342	3e-94	O
LOC475201	PREDICTED: similar to calumenin isoform 2 isoform 3 [Canis familiaris].	341	5e-94	O
LOC475201	PREDICTED: similar to calumenin precursor isoform 5 [Canis familiaris].	337	1e-92	O
LOC484379	PREDICTED: similar to reticulocalbin 3, EF-hand calcium binding domain [Canis familiaris].	307	8e-84	O
LOC487666	PREDICTED: similar to reticulocalbin 2 [Canis familiaris].	170	2e-42	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
RCN1 reticulocalbin 1, EF-hand calcium binding domain [Bos taurus]. 527 e-150 O

CALU calumenin precursor [Bos taurus]. 341 5e-94 O

RCN3 reticulocalbin-3 precursor [Bos taurus]. 302 2e-82 O

RCN2 reticulocalbin-2 [Bos taurus]. 172 5e-43 O

SDF4 45 kDa calcium-binding protein precursor [Bos taurus]. 93.6 2e-19 O

CETN3 centrin-3 [Bos taurus]. 53.9 2e-07 O

Locus	Definition	Score	E value	FL
RCN1	reticulocalbin 1, EF-hand calcium binding domain [Bos taurus].	527	e-150	O
CALU	calumenin precursor [Bos taurus].	341	5e-94	O
RCN3	reticulocalbin-3 precursor [Bos taurus].	302	2e-82	O
RCN2	reticulocalbin-2 [Bos taurus].	172	5e-43	O
SDF4	45 kDa calcium-binding protein precursor [Bos taurus].	93.6	2e-19	O
CETN3	centrin-3 [Bos taurus].	53.9	2e-07	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100516484 PREDICTED: reticulocalbin-1-like isoform 1 [Sus scrofa]. 586 e-168

LOC100516484 PREDICTED: reticulocalbin-1-like isoform 2 [Sus scrofa]. 545 e-155 O

CALU PREDICTED: calumenin isoform 2 [Sus scrofa]. 344 5e-95 O

LOC100518493 PREDICTED: reticulocalbin-3-like [Sus scrofa]. 304 4e-83 O

RCN2 PREDICTED: reticulocalbin-2 [Sus scrofa]. 175 4e-44

LOC100522934 PREDICTED: LOW QUALITY PROTEIN: 45 kDa calcium-binding protein-like [Sus scrofa]. 91.7 5e-19

CETN3 PREDICTED: centrin-3 [Sus scrofa]. 54.7 7e-08 O

Locus	Definition	Score	E value	FL
LOC100516484	PREDICTED: reticulocalbin-1-like isoform 1 [Sus scrofa].	586	e-168
LOC100516484	PREDICTED: reticulocalbin-1-like isoform 2 [Sus scrofa].	545	e-155	O
CALU	PREDICTED: calumenin isoform 2 [Sus scrofa].	344	5e-95	O
LOC100518493	PREDICTED: reticulocalbin-3-like [Sus scrofa].	304	4e-83	O
RCN2	PREDICTED: reticulocalbin-2 [Sus scrofa].	175	4e-44
LOC100522934	PREDICTED: LOW QUALITY PROTEIN: 45 kDa calcium-binding protein-like [Sus scrofa].	91.7	5e-19
CETN3	PREDICTED: centrin-3 [Sus scrofa].	54.7	7e-08	O

Assembly Members: 10 TOP

Library Plate Loc. Read Name Accession Full Seq.

KDN01 0062 A11 KDN01_0062_A11.b FS675344
LVRM1 0077 D02 LVRM1_0077_D02.b BP138969
LVRM1 0195 D03 LVRM1_0195_D03.b CJ006590
OVR01 0061 H02 OVR01_0061_H02.b BW965096
OVRM1 0044 G06 OVRM1_0044_G06.b BP460821
PST01 0001 H05 PST01_0001_H05.b FS697129
SKNB1 0040 D02 SKNB1_0040_D02.b DB802206
SKNB1 0070 A02 SKNB1_0070_A02.b DB804226
SPL01 0094 E02 SPL01_0094_E02.b CJ021483
THY01 0027 H08 THY01_0027_H08.b BP168869

SNPs: 2 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
315 A 7 0 0.700 B S AGA/R
G 0 3 0.300 AGG/R
399 A 0 3 0.300 B S GTA/V
G 7 0 0.700 GTG/V

Alignment: TOP

20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LVRM1_0195_D03.b :                           ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0077_D02.b :                        agttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0061_H02.b : nnnttcgcttgtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0094_E02.b :  nnnnggctagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SKNB1_0040_D02.b :                                                             
KDN01_0062_A11.b :                                                           nn
SKNB1_0070_A02.b :                                                             
OVRM1_0044_G06.b :                             ttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0027_H08.b :      ttgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PST01_0001_H05.b :                                                            n


20110601C-013793 : .....................ATTCCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
                   ---------+---------+---------+---------+---------+---------+ 39
LVRM1_0195_D03.b : xxxxxxxxxxxxxxxxxxxxxATTCCCGAGCTGCCGCCTTCGTCGCTCGCTCGGTGCTTC
LVRM1_0077_D02.b : xxxxxxxxxxxxxxxxxxxxxxTTCCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
OVR01_0061_H02.b : xxxxxxxxxxxxxxxxxxxxxxTTCCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
SPL01_0094_E02.b : xxxxxxxxxxxxxxxxxxxxxxTTCCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
SKNB1_0040_D02.b :    nnnnncccactgtggctatggtCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
KDN01_0062_A11.b : nnnnncctacgttggctactggattCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
SKNB1_0070_A02.b :   nnnnnttaactttgctatgnattCCGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
OVRM1_0044_G06.b : xxxxxxxxxxxxxxxxxxxxxxxctggGAGCTGCCGCCTTCGTCGCTCGCTCGGTGCTTC
THY01_0027_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxGAGCTGCCGCCCTCGTCGCTCGCTCGGTGCTTC
PST01_0001_H05.b : ccaagctatnnnnnngctacgggtgctatggactgcgccctcTCGCTCGCTCGGTGCTTC


20110601C-013793 : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
                   ---------+---------+---------+---------+---------+---------+ 99
LVRM1_0195_D03.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
LVRM1_0077_D02.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
OVR01_0061_H02.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
SPL01_0094_E02.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
SKNB1_0040_D02.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
KDN01_0062_A11.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
SKNB1_0070_A02.b : CCCGCGGGCCCCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
OVRM1_0044_G06.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
THY01_0027_H08.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG
PST01_0001_H05.b : CCCGCGGGCCGCGCTCTCCTCCCGACGATGGCGTGCGGCGGGCGCGGTCGCCGCCTGGGG


20110601C-013793 : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
                   ---------+---------+---------+---------+---------+---------+ 159
LVRM1_0195_D03.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
LVRM1_0077_D02.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
OVR01_0061_H02.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
SPL01_0094_E02.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
SKNB1_0040_D02.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
KDN01_0062_A11.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
SKNB1_0070_A02.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
OVRM1_0044_G06.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCTCCAACGCTGAGGGCCAAGCCC
THY01_0027_H08.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC
PST01_0001_H05.b : CTGGCTCTGGGGCTGCTGCTGGCGTTGGTGCTGGCGCCCCCAACGCTGAGGGCCAAGCCC


20110601C-013793 : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
                   ---------+---------+---------+---------+---------+---------+ 219
LVRM1_0195_D03.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
LVRM1_0077_D02.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
OVR01_0061_H02.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
SPL01_0094_E02.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
SKNB1_0040_D02.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
KDN01_0062_A11.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
SKNB1_0070_A02.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
OVRM1_0044_G06.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
THY01_0027_H08.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG
PST01_0001_H05.b : ACCGTGCGCAAGGAACGCGTGGTGCGGCCCGACTCGGAGCTGGGAGAGCGGCCGCCCGAG


20110601C-013793 : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
                   ---------+---------+---------+---------+---------+---------+ 279
LVRM1_0195_D03.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
LVRM1_0077_D02.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
OVR01_0061_H02.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
SPL01_0094_E02.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
SKNB1_0040_D02.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
KDN01_0062_A11.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
SKNB1_0070_A02.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
OVRM1_0044_G06.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
THY01_0027_H08.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC
PST01_0001_H05.b : GACAATCAGAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCAAGGAGGACTCCAAGACC


20110601C-013793 : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
                   ---------+---------+---------+---------+---------+---------+ 339
LVRM1_0195_D03.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGGCTGGGGAAGATTGTCGATCGAATC
LVRM1_0077_D02.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGGCTGGGGAAGATTGTCGATCGAATC
OVR01_0061_H02.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
SPL01_0094_E02.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
SKNB1_0040_D02.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
KDN01_0062_A11.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
SKNB1_0070_A02.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
OVRM1_0044_G06.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGGCTGGGGAAGATTGTCGATCGAATC
THY01_0027_H08.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC
PST01_0001_H05.b : TTCGACCAGCTCACCTCGGAGGAGAGCAAGGAGAGACTGGGGAAGATTGTCGATCGAATC


20110601C-013793 : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
                   ---------+---------+---------+---------+---------+---------+ 399
LVRM1_0195_D03.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTA
LVRM1_0077_D02.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTA
OVR01_0061_H02.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
SPL01_0094_E02.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
SKNB1_0040_D02.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
KDN01_0062_A11.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
SKNB1_0070_A02.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
OVRM1_0044_G06.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTA
THY01_0027_H08.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG
PST01_0001_H05.b : GACAGTGACGGGGACGGCTTTGTTACCGCTGAGGAGCTGAAAACCTGGATCAAACGGGTG


20110601C-013793 : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
                   ---------+---------+---------+---------+---------+---------+ 459
LVRM1_0195_D03.b : CAGAAGAGATACATCTACGATAATGTTGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
LVRM1_0077_D02.b : CAGAAGAGATACATCTAANATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
OVR01_0061_H02.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
SPL01_0094_E02.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
SKNB1_0040_D02.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
KDN01_0062_A11.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
SKNB1_0070_A02.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
OVRM1_0044_G06.b : CAGAAGAGATACATCTACGATAATGTTGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
THY01_0027_H08.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA
PST01_0001_H05.b : CAGAAGAGATACATCTACGATAATGTCGCTAAAGTCTGGAAGGATTATGATCGGGACAAA


20110601C-013793 : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
                   ---------+---------+---------+---------+---------+---------+ 519
LVRM1_0195_D03.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
LVRM1_0077_D02.b : GACGATNAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
OVR01_0061_H02.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
SPL01_0094_E02.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
SKNB1_0040_D02.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
KDN01_0062_A11.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
SKNB1_0070_A02.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
OVRM1_0044_G06.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
THY01_0027_H08.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC
PST01_0001_H05.b : GACGATAAAATTTCCTGGGAAGAATACAAACAAGCCACCTACGGTTACTACCTAGGAAAC


20110601C-013793 : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
                   ---------+---------+---------+---------+---------+---------+ 579
LVRM1_0195_D03.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
LVRM1_0077_D02.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAANAAGATGCTGCCACGTGAT
OVR01_0061_H02.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
SPL01_0094_E02.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
SKNB1_0040_D02.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
KDN01_0062_A11.b : CCCACGGAGTTTCATGACACTTCAGATCATCGAACCTTTAAAAAGATGCTGCCACGTGAT
SKNB1_0070_A02.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
OVRM1_0044_G06.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
THY01_0027_H08.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT
PST01_0001_H05.b : CCCACGGAGTTTCATGACACTTCAGATCATCAAACCTTTAAAAAGATGCTGCCACGTGAT


20110601C-013793 : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
                   ---------+---------+---------+---------+---------+---------+ 639
LVRM1_0195_D03.b : GAAAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
LVRM1_0077_D02.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
OVR01_0061_H02.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
SPL01_0094_E02.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
SKNB1_0040_D02.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
KDN01_0062_A11.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
SKNB1_0070_A02.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
OVRM1_0044_G06.b : GAAAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAAGAGTTC
THY01_0027_H08.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC
PST01_0001_H05.b : GAGAGAAGGTTCAAGGCTGCAGACCTCGATGGTGACCAGACAGCCACCCGTGAGGAGTTC


20110601C-013793 : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
                   ---------+---------+---------+---------+---------+---------+ 699
LVRM1_0195_D03.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
LVRM1_0077_D02.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
OVR01_0061_H02.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
SPL01_0094_E02.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
SKNB1_0040_D02.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
KDN01_0062_A11.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
SKNB1_0070_A02.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
OVRM1_0044_G06.b : ACTGCCTTTCTGCAACCTGAAGAGTTTGAACATATGAAGGAAATTGTGGTTTTGGAAACT
THY01_0027_H08.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT
PST01_0001_H05.b : ACTGCCTTTCTGCACCCTGAGGAGTTTGAGCATATGAAGGAAATTGTGGTTTTGGAAACT


20110601C-013793 : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
                   ---------+---------+---------+---------+---------+---------+ 759
LVRM1_0195_D03.b : CTGGANGACATCGACNAGAACGGGGATGGCT                            
LVRM1_0077_D02.b : CTGGAGGACATCGACAAGAACGGNGATGGCTCTGTGGATCACGACGAGTATATTGCCGAT
OVR01_0061_H02.b : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
SPL01_0094_E02.b : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
SKNB1_0040_D02.b : CTGGAGGACATCGACNAGAACGGGGATGGCTTTGTGGATCANGACGAGTATATTGCCGAT
KDN01_0062_A11.b : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
SKNB1_0070_A02.b : CTGGAGGACATCGACATGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
OVRM1_0044_G06.b : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAAGACAAGCATATTGCCGAc
THY01_0027_H08.b : CTGGAGGACATCGACAAGAACGGGGATGGCTTTGTGGATCAGGACGAGTATATTGCCGAT
PST01_0001_H05.b : CTGGAGGACATCGACNAGAACGGGGATGGCTTTGTGGATCANGACGAGTATATTGCCGAT


20110601C-013793 : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
                   ---------+---------+---------+---------+---------+---------+ 819
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b : ATGTTctcc                                                  
OVR01_0061_H02.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
SPL01_0094_E02.b : ATGTTTTCCCACGAGGAGGGTGGGCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
SKNB1_0040_D02.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
KDN01_0062_A11.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
SKNB1_0070_A02.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
OVRM1_0044_G06.b : atgcn                                                      
THY01_0027_H08.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAGCCAGACTGGGTGTTGTCAGAACGGGAGCAG
PST01_0001_H05.b : ATGTTTTCCCACGAGGAGGGTGGCCCTGAACCAGACTGGGTGTTGTCAGAACGGGAGCAG


20110601C-013793 : TTTAATGAATTCCGGG*ATCTGAACAAGGATGGGAAGCTGGACAAGGATGAGATTCGCCA
                   ---------+---------+---------+---------+---------+---------+ 878
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b : TTTATTGGATTCCGGGGATCTGAACAAGGATGGGAAGCTGGaacaaggatgagatcgccc
SPL01_0094_E02.b : TTTTATGAATTCCGGG*ATCTGAACCAGGATGGGAAGCTGGGACAGGATAAGATTCGCCC
SKNB1_0040_D02.b : TTTAATGAATTCCGGG*ATCTGAAACANGATGGGAAGCTGGACAAGGATGAGATTCGCCA
KDN01_0062_A11.b : TTTAATGAATTCCGGG*ATCTGAACAAGGATGGGAAGCTGGGCAAGGATGAGATTCGCCA
SKNB1_0070_A02.b : TTTAATGAATTCCGGG*ATCTGAACAAGGATGGGAAGCTGGACAAGGATGAGATTCGCCA
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : TTTAATGAATTCCGGG*ATCTGAACAAGGATGGGAAGCTGGACCAGGATGAAATTCCCCC
PST01_0001_H05.b : TTTTATGAATTCGGGG*ATCTGAACAAAGATGGGAAACTGGACAAGGATGAGATTCGCCA


20110601C-013793 : CTGGATCCTCCCGCAAGACTATGACCACGCTCAGGCAGAGGCCAGGCATCTGGTGTA...
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b : ctggatcctccccgcagactatgaccacgctccaggcgaggccaggcacctggtgtacga
SPL01_0094_E02.b : CTGGATCCTCCCcgcagactttgaccaccctcagggcgaaggcccggccccctggtgtac
SKNB1_0040_D02.b : CTGGATCCTCCCGCCAGACTATGACCACGCtcaggcagaggccaggcacctggtgtacga
KDN01_0062_A11.b : CTGGATCCTCCCGCAAGACTATGACCACGCtcnagcagaggccaggcacctgntgtacga
SKNB1_0070_A02.b : CTGGATCCTCCCGCA*GACTATGACCACGCTCAGGCAGAGGCCAGGCATCTGGTGTAcga
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : CTGGATCCTCCCGCAagactatgaccaccgctcaggcagaaggccaggccccctggggta
PST01_0001_H05.b : CTGGATCCTCCCGCCAGACTATGACCACGCtcaggcaaaagccaggcacctggggtacga


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b : gttcgacaagaaccaggatgagaagctccctaaagaaggaattttggaacaactggaaac
SPL01_0094_E02.b : cagtccgaacaaaaacaaggatgaaaaagcttccttaagaaggaaattcttggacaactg
SKNB1_0040_D02.b : gtcgaacagaaacaggatgagaagctcactaaagaggagatcttggacactggaacatgt
KDN01_0062_A11.b : gtcggacaagaacanggatgagaagctcactaaagaagagatctttggacactgggacag
SKNB1_0070_A02.b : gtcggaacagaacaagatgagaagctcactaaagaggagatcttggacactggaacatgt
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : caaatccggacaaaaaccaggattaaaaacttccctaaagaggggaactttggacaactg
PST01_0001_H05.b : gtcggaaaaaaccaagatgaaaagctccttaaaaaggaaatctggaaaatgggaaatggt


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b : tgtgttgttggggacccccactatccatttagggggaagatttccccccaaaattcccga
SPL01_0094_E02.b : gaaccctgttttgtttgggaaccaaggctaccc                          
SKNB1_0040_D02.b : ttgttgggagccagctaccatttagggggagatctcaccaaaatcacgatgagcttgatg
KDN01_0062_A11.b : tgttgttgggagcccagctaccaattatggggaagatctcaccaaaaatcacgatgagct
SKNB1_0070_A02.b : ttgttgggagccaactaccatttatgggaagatctcaccaaaatcacgatgagctttgat
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : gaaaccttgtttgttagggaagcccaacctccccaatttatgggggaaaaatttcccccc
PST01_0001_H05.b : tttgggaaccacctccaattttggggaaattctccccaaatcccgagaacttttatggta


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b : tagccctttt                                                 
SPL01_0094_E02.b :                                                             
SKNB1_0040_D02.b : taaactcccgtacctgacgaactgtctaggctcctttttatggcccggagggtgctacca
KDN01_0062_A11.b : ttgatgtagactcaccgtacatgacaaactgtcataggctccttttaattgcccggaagg
SKNB1_0070_A02.b : gtaaactcaccgtacatgacgactgtcaaggcttcttttattgtcccgatgntgctacaa
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : aaaaattcccccaataaagcttttttattggtaaaacctccccccgtaaacaattaaaac
PST01_0001_H05.b : accccccgaacatggaaaatggcaaagcttccttttattgccccgaaggtgcaaaaattg


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b :                                                             
SPL01_0094_E02.b :                                                             
SKNB1_0040_D02.b : tgcctcatttaaccagttgggtcccccccaccccccaagcagttaccccccccatggggg
KDN01_0062_A11.b : gtgctacattgtctccattacagcattgggttccccccccaccccaaacaagttaatacc
SKNB1_0070_A02.b : tgtcccattacaccaatttgtccccccccccccccccagcagttaatcacccccaatggg
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : aaaaaccgtgtttctttaaggggctttttccctttttttttttttttttgtctctttccc
PST01_0001_H05.b : tcccttaaagaagttggttccccccccccccccaagcagttaacccccaaaaggggttaa


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b :                                                             
SPL01_0094_E02.b :                                                             
SKNB1_0040_D02.b : taaattgcctccctcaaattgcgggaaaaacccctttttttcggaaattcctcaaccgta
KDN01_0062_A11.b : tcaaatggggttaaaatgcctctaactcatatttgctgaaaaaaccatccctttctttag
SKNB1_0070_A02.b : gtaaaatttctcctctccaaaatttctg                               
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b : gggggaagggggtgggttgtgt                                     
PST01_0001_H05.b : atgcccccccccaatttcggggaaaaacccccccttttttcgagaattccccaacagcaa


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b :                                                             
SPL01_0094_E02.b :                                                             
SKNB1_0040_D02.b : aaattgt                                                    
KDN01_0062_A11.b : gaaatttcctccaacgttaaatattggaaaattaaaaccttggagaaccctgtaaaaagg
SKNB1_0070_A02.b :                                                             
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b :                                                             
PST01_0001_H05.b : aaatttggaattccaaccctgagaaactttaaaaaaagattttttttttcgagactaagg


20110601C-013793 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 935
LVRM1_0195_D03.b :                                                             
LVRM1_0077_D02.b :                                                             
OVR01_0061_H02.b :                                                             
SPL01_0094_E02.b :                                                             
SKNB1_0040_D02.b :                                                             
KDN01_0062_A11.b : aattttagcttttc                                             
SKNB1_0070_A02.b :                                                             
OVRM1_0044_G06.b :                                                             
THY01_0027_H08.b :                                                             
PST01_0001_H05.b : gggaaaaaattggggattttttctaatgggg