Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-013800

Sequence: [FASTA format sequence] AGAGTTGCTG TGGTGTCGGT GCTGAGGCGG CTTCGTTCTT CTGCTAGTGA GCCTCGCGGA TGTAGAGTTC CGCGTCTAAG TCCTGCTGTC TGCGGCTACC AATTGGGAGG TCAGGAGCGC AGGGTACTTT CTTTGGGCCA GAGCCGGCCC CCTTTTTTGC CTTCGCCACT AAGTGAAGCC ATTTAGGTCA GCTTCCGCGC GGCTGAGGAG AAGGCCGCCG GCGATATGTT CAAAAACACG TTCCAGAGCG GCTTCCTCTC CATTCTCTAC AGCATTGGCA GCAAGCCCCT GCAAATCTGG GACAAAAAGG TGAGGAATGG CCACATCAAA AGAATCACTG ATAATGACAT CCAGTCCCTG GTGCTAGAGA TTGAAGGAAC AAACGTCAGC ACCACATATA TCACATGTCC TGCAGACCCA AAGAAAACAT TGGGAATTAA ACTTCCCTTC CTTGTCATGA TTATCAAAAA CCTGAAGAAA TATTTTACCT TTGAAGTGCA GGTACTAGAT GACAAGAATG TGCGTCGACG GTTTCGGGCA AGTAACTACC AGAGCACCAC CCGGGTCAAA CCCTTCATCT GTACCATGCC CATGCGGCTA GATGATGGCT GGAACCAAAT TCAGTTCAAC CTGTCAGACT TTACTCGTCG GGCATATGGC ACAAATTACA TTGAGACCCT AAGGGTGCAG ATCCATGCAA ACTGTCGCAT CCGACGGGTT TACTTCTCAG ACAGACTCTA CTCAGAAGAC GAACTGCCAG CAGAGTTCAA ACTGTATCTT CCAGTTCAGA ACAAAGCTAA GCAATAACTG AAATGCAACT AAAGGAATAG ATCCTGGATA TGACTCTTAG TTTAAAGGAA AACTATCTGG AGGACAATGC AAAAAACATA TATTTATCTT AGTTCACCGT ACTGTGGTTC TTTTATCTCT ACTTCGCATC CCTTGTCATG GACACCAGTG ACCGTGCCGT AATGCAATAA TTGCATTGTA AG

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
C16orf80 transcription factor IIB [Homo sapiens]. 391 e-109 O

		Locus	Definition	Score	E value	FL
		C16orf80	transcription factor IIB [Homo sapiens].	391	e-109	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Gtl3 gene trap locus 3 [Mus musculus]. 393 e-109 O

		Locus	Definition	Score	E value	FL
		Gtl3	gene trap locus 3 [Mus musculus].	393	e-109	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC487256 PREDICTED: similar to transcription factor IIB [Canis familiaris]. 393 e-109 O

		Locus	Definition	Score	E value	FL
		LOC487256	PREDICTED: similar to transcription factor IIB [Canis familiaris].	393	e-109	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
C18H16orf80 transcription factor IIB [Bos taurus]. 393 e-109 O

		Locus	Definition	Score	E value	FL
		C18H16orf80	transcription factor IIB [Bos taurus].	393	e-109	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100513209 PREDICTED: UPF0468 protein C16orf80 homolog [Sus scrofa]. 393 e-110 O

		Locus	Definition	Score	E value	FL
		LOC100513209	PREDICTED: UPF0468 protein C16orf80 homolog [Sus scrofa].	393	e-110	O

Assembly Members: 11 TOP

Library Plate Loc. Read Name Accession Full Seq.

BFLT1 0039 C08 BFLT1_0039_C08.b FS643169
BMWN1 0027 D11 BMWN1_0027_D11.b HX207218
CBLT1 0054 F02 CBLT1_0054_F02.b HX215472
CLNT1 0034 H08 CLNT1_0034_H08.b FS659754
CLNT1 0082 E06 CLNT1_0082_E06.b
KDN01 0094 F02 KDN01_0094_F02.b FS677931
LNG01 0031 D11 LNG01_0031_D11.b BP436775 AK231845
LNG01 0064 F09 LNG01_0064_F09.b BP438668
MLN01 0098 B03 MLN01_0098_B03.b CJ015500
OVR01 0047 F02 OVR01_0047_F02.b BP143549
UTR01 0066 E09 UTR01_0066_E09.b BP464026

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
66 A 8 0 0.727 W -
C 3 0 0.273
69 C 6 0 0.545 W -
T 5 0 0.455
621 C 3 0 0.300 W S ATC/I
T 7 0 0.700 ATT/I

Alignment: TOP

20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
LNG01_0031_D11.b : tgttttttttttcgcattgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BMWN1_0027_D11.b :                                 ttttggcagagtagacgxxxxxxxxxxx
CBLT1_0054_F02.b :                                 ttttaccaggtagaggxxxxxxxxxxxx
MLN01_0098_B03.b :              nnnnggttagtgacttnacxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0047_F02.b :        ggacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0064_F09.b :                nnggcttggacttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0034_H08.b :            gtgttttnnnnnctccgttcgcgnacgxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0039_C08.b :                      ngaactctttagctgacgagtgxxxxxxxxxxxxxxxxx
UTR01_0066_E09.b :           cctttttggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0082_E06.b :                nntttgtttnnnnnnccgtcgcgacgagtgtxxxxxxxxxxxxxx
KDN01_0094_F02.b :                                                             


20110601C-013800 : ..............................AGAGTTGCTGTGGTGTCGGTGCTGAGGCGG
                   ---------+---------+---------+---------+---------+---------+ 30
LNG01_0031_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGTTGCTGTGGTGTCGGTGCTGAGGTGG
BMWN1_0027_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGTTGCTGTGGTGTCGGTGCTGAGGCGG
CBLT1_0054_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGTTGCTGTGGTGTCGGTGCTGAGGCGG
MLN01_0098_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgGAGTTGCTGTGGTGTCGGTGCTGAGGTGG
OVR01_0047_F02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTGCTGTGGTGTCGGTGCTGAGGCGG
LNG01_0064_F09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTGCTGTGGTGTCGGTGCTGAGGTGG
CLNT1_0034_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTGCTGTGGTGTCGGTGCTGAGGCGG
BFLT1_0039_C08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTTGCTGTGGTGTCGGTGCTGAGGCGG
UTR01_0066_E09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGCTGTGGTGTCGGTGCTGAGGTGG
CLNT1_0082_E06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxccccgtcaTGCTGTGGTGNCGGNGCTGAGGCGG
KDN01_0094_F02.b :              nnnncctgaggtggctctggagTGCTGTGGTGTCGGTGCTGAGGTGG


20110601C-013800 : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC
                   ---------+---------+---------+---------+---------+---------+ 90
LNG01_0031_D11.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC
BMWN1_0027_D11.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTCCCGCGTCTAAGTCCTGCTGTC
CBLT1_0054_F02.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTCCCGCGTCTAAGTCCTGCTGTC
MLN01_0098_B03.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC
OVR01_0047_F02.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTCCCGCGTCTAAGTCCTGCTGTC
LNG01_0064_F09.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC
CLNT1_0034_H08.b : CTTCGTTCTTCTACTAGTGAGCCTCGCGGATGTAGCGTCCCGCGTCTAAGTCCTGCTGTC
BFLT1_0039_C08.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGCGTCCCGCGTCTAAGTCCTGCTGTC
UTR01_0066_E09.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC
CLNT1_0082_E06.b : CTTCGTTCTCCTTCTAGAGAGCCTCGCGGATGTAGCGTCCCGCGTCTAAGTCCTGCTGTC
KDN01_0094_F02.b : CTTCGTTCTTCTGCTAGTGAGCCTCGCGGATGTAGAGTTCCGCGTCTAAGTCCTGCTGTC


20110601C-013800 : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
                   ---------+---------+---------+---------+---------+---------+ 150
LNG01_0031_D11.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
BMWN1_0027_D11.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
CBLT1_0054_F02.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
MLN01_0098_B03.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
OVR01_0047_F02.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
LNG01_0064_F09.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
CLNT1_0034_H08.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
BFLT1_0039_C08.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
UTR01_0066_E09.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
CLNT1_0082_E06.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC
KDN01_0094_F02.b : TGCGGCTACCAATTGGGAGGTCAGGAGCGCAGGGTACTTTCTTTGGGCCAGAGCCGGCCC


20110601C-013800 : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
                   ---------+---------+---------+---------+---------+---------+ 210
LNG01_0031_D11.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
BMWN1_0027_D11.b : CCTTTTTTGCCTTCGCCACTAAGTAAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
CBLT1_0054_F02.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
MLN01_0098_B03.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
OVR01_0047_F02.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
LNG01_0064_F09.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
CLNT1_0034_H08.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
BFLT1_0039_C08.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
UTR01_0066_E09.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
CLNT1_0082_E06.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGGTCAGCTTCCGCGCGGCTGAGGAG
KDN01_0094_F02.b : CCTTTTTTGCCTTCGCCACTAAGTGAAGCCATTTAGCTCAGCTTCCGCGCGGCTGAGGAG


20110601C-013800 : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
                   ---------+---------+---------+---------+---------+---------+ 270
LNG01_0031_D11.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
BMWN1_0027_D11.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
CBLT1_0054_F02.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
MLN01_0098_B03.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
OVR01_0047_F02.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
LNG01_0064_F09.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
CLNT1_0034_H08.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
BFLT1_0039_C08.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
UTR01_0066_E09.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
CLNT1_0082_E06.b : AAGGCCGCCGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC
KDN01_0094_F02.b : AAGGCCGCTGGCGATATGTTCAAAAACACGTTCCAGAGCGGCTTCCTCTCCATTCTCTAC


20110601C-013800 : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
                   ---------+---------+---------+---------+---------+---------+ 330
LNG01_0031_D11.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
BMWN1_0027_D11.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
CBLT1_0054_F02.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
MLN01_0098_B03.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
OVR01_0047_F02.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
LNG01_0064_F09.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
CLNT1_0034_H08.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
BFLT1_0039_C08.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
UTR01_0066_E09.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
CLNT1_0082_E06.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA
KDN01_0094_F02.b : AGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGGTGAGGAATGGCCACATCAAA


20110601C-013800 : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
                   ---------+---------+---------+---------+---------+---------+ 390
LNG01_0031_D11.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
BMWN1_0027_D11.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
CBLT1_0054_F02.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
MLN01_0098_B03.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
OVR01_0047_F02.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
LNG01_0064_F09.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
CLNT1_0034_H08.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
BFLT1_0039_C08.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
UTR01_0066_E09.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
CLNT1_0082_E06.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC
KDN01_0094_F02.b : AGAATCACTGATAATGACATCCAGTCCCTGGTGCTAGAGATTGAAGGAACAAACGTCAGC


20110601C-013800 : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
                   ---------+---------+---------+---------+---------+---------+ 450
LNG01_0031_D11.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
BMWN1_0027_D11.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
CBLT1_0054_F02.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
MLN01_0098_B03.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
OVR01_0047_F02.b : ACCACATATATCACATGTCCTGCATACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
LNG01_0064_F09.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
CLNT1_0034_H08.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
BFLT1_0039_C08.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
UTR01_0066_E09.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
CLNT1_0082_E06.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTC
KDN01_0094_F02.b : ACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGGATTAAACTTCCCTTC


20110601C-013800 : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
                   ---------+---------+---------+---------+---------+---------+ 510
LNG01_0031_D11.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
BMWN1_0027_D11.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
CBLT1_0054_F02.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
MLN01_0098_B03.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
OVR01_0047_F02.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
LNG01_0064_F09.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
CLNT1_0034_H08.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
BFLT1_0039_C08.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
UTR01_0066_E09.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCTGGTACTAGAT
CLNT1_0082_E06.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT
KDN01_0094_F02.b : CTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTGCAGGTACTAGAT


20110601C-013800 : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
                   ---------+---------+---------+---------+---------+---------+ 570
LNG01_0031_D11.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
BMWN1_0027_D11.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
CBLT1_0054_F02.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
MLN01_0098_B03.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
OVR01_0047_F02.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
LNG01_0064_F09.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
CLNT1_0034_H08.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
BFLT1_0039_C08.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
UTR01_0066_E09.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
CLNT1_0082_E06.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA
KDN01_0094_F02.b : GACAAGAATGTGCGTCGACGGTTTCGGGCAAGTAACTACCAGAGCACCACCCGGGTCAAA


20110601C-013800 : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
                   ---------+---------+---------+---------+---------+---------+ 630
LNG01_0031_D11.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
BMWN1_0027_D11.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
CBLT1_0054_F02.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
MLN01_0098_B03.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
OVR01_0047_F02.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
LNG01_0064_F09.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
CLNT1_0034_H08.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGACGGCTGGAACCAAATCCAGTTCAAC
BFLT1_0039_C08.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATCCAGTTCAAC
UTR01_0066_E09.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC
CLNT1_0082_E06.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAACCCAGTTCAAC
KDN01_0094_F02.b : CCCTTCATCTGTACCATGCCCATGCGGCTAGATGATGGCTGGAACCAAATTCAGTTCAAC


20110601C-013800 : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
                   ---------+---------+---------+---------+---------+---------+ 690
LNG01_0031_D11.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
BMWN1_0027_D11.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
CBLT1_0054_F02.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
MLN01_0098_B03.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
OVR01_0047_F02.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACATATTACATTGAGACCCTAAAGGTGCAG
LNG01_0064_F09.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCGG
CLNT1_0034_H08.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
BFLT1_0039_C08.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
UTR01_0066_E09.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
CLNT1_0082_E06.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG
KDN01_0094_F02.b : CTGTCAGACTTTACTCGTCGGGCATATGGCACAAATTACATTGAGACCCTAAGGGTGCAG


20110601C-013800 : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
                   ---------+---------+---------+---------+---------+---------+ 750
LNG01_0031_D11.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
BMWN1_0027_D11.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
CBLT1_0054_F02.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
MLN01_0098_B03.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
OVR01_0047_F02.b : ATCCATGTCAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
LNG01_0064_F09.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
CLNT1_0034_H08.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
BFLT1_0039_C08.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
UTR01_0066_E09.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC
CLNT1_0082_E06.b : ATCCATGCCAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAAAC
KDN01_0094_F02.b : ATCCATGCAAACTGTCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGAC


20110601C-013800 : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
                   ---------+---------+---------+---------+---------+---------+ 809
LNG01_0031_D11.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
BMWN1_0027_D11.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
CBLT1_0054_F02.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
MLN01_0098_B03.b : G*AACTGCCAGCAGAGTTTCAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
OVR01_0047_F02.b : G*AACTGCCAGCAGAGTTCATACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
LNG01_0064_F09.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAACAATAACT
CLNT1_0034_H08.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAANCAAGCTAAGCAATAACT
BFLT1_0039_C08.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
UTR01_0066_E09.b : GAAACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAAAACAAAGCTAAGCAATAACT
CLNT1_0082_E06.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT
KDN01_0094_F02.b : G*AACTGCCAGCAGAGTTCAAACTGTATCTTCCAGTTCAGAACAAAGCTAAGCAATAACT


20110601C-013800 : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAGGAAAACTATCT
                   ---------+---------+---------+---------+---------+---------+ 868
LNG01_0031_D11.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAGGGAAACTATCT
BMWN1_0027_D11.b : G*AAATGNCACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAAGAAAACTATCT
CBLT1_0054_F02.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTTAAGGAAAACTATCT
MLN01_0098_B03.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAG*TTAAAGGGAAACTATCT
OVR01_0047_F02.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAGGATAACTATCT
LNG01_0064_F09.b : GAAAATGCCACTAA*GGAATAAATCCTGGATATGACTCTTAGTTTAAAGG*AAACTATCT
CLNT1_0034_H08.b : G*AAATGGCACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAA*GGAAAACTATCT
BFLT1_0039_C08.b : G*AAAATGCACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAAGAAAACTATCT
UTR01_0066_E09.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCCTAGTTTAAAGGAAAACTATCT
CLNT1_0082_E06.b : G*AAATGCAACTAAGGGAATAGATCCTGGATATGACTCTTAGTTTTAAGGAAAACTATCT
KDN01_0094_F02.b : G*AAATGCAACTAAAGGAATAGATCCTGGATATGACTCTTAGTTTAAAGGAAAACTATCT


20110601C-013800 : GGA*GGACAATGCAAAAAACATATATTTATCTTAGTTCACCGTACTGTGGTTCTTTTATC
                   ---------+---------+---------+---------+---------+---------+ 927
LNG01_0031_D11.b : GGG*AGACAATGCAAAAAACATATATTTATCTTAgtttacccgtactgtgggttcttttt
BMWN1_0027_D11.b : GGA*GGACNATGCNAAAAAC*TATATTTATCTTAGT*CAACGTACTGTGGTTCTTTTtat
CBLT1_0054_F02.b : GGG*AGACAATGCAAAAAACATATATTTATCTTANTTCACCGTACTGTGGTTCTTTTATC
MLN01_0098_B03.b : GGA*GGACATGCNA**AAACATATATTTATCTTAGT*CACCGTACTGTGGTTCTTTTATC
OVR01_0047_F02.b : GGAAGGACAATGCAAAAAACATATATCTATCTTAGTTCATCGTAattgtgggtcttttta
LNG01_0064_F09.b : GGA*GGACAATGCAAAAAACATATATTTATCTTAGTTCAACGTACTGTGGTTCTTTTATC
CLNT1_0034_H08.b : GGA*GGACAATGCA*AACACATATATTTATCTTAGTTCCACGTACTGTGGTTCTTTTATC
BFLT1_0039_C08.b : GGN*AGAACATGCAAAAAACATATATTTATCTTAGTTCACCGTACTGTGGTTCTTTTATC
UTR01_0066_E09.b : GGGAGGA*AATGCAAAAAACATATtatttatcttagttccccgaactggtggttcttttt
CLNT1_0082_E06.b : GGA*GGACAATGGAAAAAcataatttttcttaattcaccgtactggggttttttaatttc
KDN01_0094_F02.b : GGA*GGACAATGCNAAAAACATATATTTATCTTAGTTCACCGTACTGTGGTTCTTTTATC


20110601C-013800 : *TCTACTTCGCATCCCTTGTCATGGACACCAGTGACCGTGCCGTAATGCAATAATTGCAT
                   ---------+---------+---------+---------+---------+---------+ 986
LNG01_0031_D11.b : atccttctactttcccatccccttggtcatgggaaacccaatgaacccgtggccgtaatt
BMWN1_0027_D11.b : ctctaactcgcatcccctgtcatggacaccantgaccgttggcctaatgccttaatggca
CBLT1_0054_F02.b : *Ttctacttcgcatcccttgtcatggacaccantgaccgtgcccgtatgcccatattgca
MLN01_0098_B03.b : *TCTACTTCGCATCCCTgtcatggacacagtgaccgtgccgtaatgcatattgcattgta
OVR01_0047_F02.b : tcttctactttcgcatccctttgtcatgggacccccatggacccgtggcgaaatggcctt
LNG01_0064_F09.b : ctctacttcgcatcccttgtcatggacaccantgaacgtgccgtaatggccttnttgcct
CLNT1_0034_H08.b : *TTctacttcgcatcccttgtcatggacaccattggacgtgccgtatgccaatattgcct
BFLT1_0039_C08.b : *TCTACTTCCCATCCCTtgtcatggacaccantgaccgtgccgtaatgccttaattgcat
UTR01_0066_E09.b : atcttctacttcgcatcccctgtcctgggaacccaatgaaccgtgcccgaaatgccttta
CLNT1_0082_E06.b : aatttgcaacccctgtatgggaaccagggacggggcggaatgccataattgatggaagaa
KDN01_0094_F02.b : CTCTACTTCGCATCCCTTGTCATGGACACCAGTGACCGTGCCGTAATGCAATAATTGCAT


20110601C-013800 : TGTAAG......................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b : ggccttaatttgcatttggtaaggtaccggtgggaaaaaaaaaacccgttcccttttgaa
BMWN1_0027_D11.b : ttggtagtacagtggaagaataaccgtcccttgaaacaatgaagggcggagtttaccctg
CBLT1_0054_F02.b : ttgtaagtacagtggaagataacccgtctttgatacatgatgctggatttatcttgctgc
MLN01_0098_B03.b : gtacagtggagaataacgtccttgaactgaatgcggagttatctgctgctgctcaagggt
OVR01_0047_F02.b : taattggcttttgtaagttccaggggggaaaaaaaaacccggcctttttgatactttgaa
LNG01_0064_F09.b : tgtaagtacaggggaagaaaaccgtcccttgaaaccgaaatgctggagtttatctgctgc
CLNT1_0034_H08.b : tgtaagtacatgggaagataaccgtccttgatactgaatgctgaatttacttgctgccgg
BFLT1_0039_C08.b : tggaattacatgggagaaaaaccgttctttgaatacttaatgctggaatttatctttgct
UTR01_0066_E09.b : tttgctttgtaaagtacaggggaaaaaaaaaacccgttccttttgaaacatgaaatgctg
CLNT1_0082_E06.b : cggggaaaaaaaccggcctttggacatgaaagggggagtttactggcgccggcctaggtg
KDN01_0094_F02.b : TGTAAGtacggtggaagataaaccgtcccttgaaacatgaatgctggaatttatcttgct


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b : taacttgaaaatgggtggggaatttttattttttgtgctggccctgggccctcctcagtg
BMWN1_0027_D11.b : ctgcccgcccccattgggggggagaggtcttttcccttgaacctttaaaaattagggggt
CBLT1_0054_F02.b : tgctcaggtggtggggagtacatttacctgacttagagaattaagatgcccaaaagcaat
MLN01_0098_B03.b : ggggagtactttacctgactagagattaagatgtctaaaagcattcaaccaaattctcca
OVR01_0047_F02.b : atgcttggaagttttatttttgtcttgccctgcccccttttgtgtgggggggggaagggg
LNG01_0064_F09.b : ccgccctcatggtggggaaggtccttttccttgactttaagaaattaagatgtcctaaaa
CLNT1_0034_H08.b : ccccagggggggggaggtcctttccctggacttaagaaataaggaggtctaaaaagaatt
BFLT1_0039_C08.b : cctgcctcatgtgggggggagtacttttccctgaacttaagaatttaggatgcctaaaag
UTR01_0066_E09.b : gaattttaactttgcctgccctgccccccgtggggggggggggagggtaaattttttccc
CLNT1_0082_E06.b : ggggaggtcctttaccgggatttaagaattagggggcctaaagggatttcgaaaaatttc
KDN01_0094_F02.b : gccctgctccatgggtgggggaggtacttttccctgaacttagaaaattaaggtgtccta


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b : ggggggggggggggggaggggtttacaatttttttttcccccctatgtgaaaacaccttt
BMWN1_0027_D11.b : tccaaaagggaatttcaaacaaatttcttcccacaagttttttttttattttttccaaaa
CBLT1_0054_F02.b : tcaaccaattttctccacattcctttttaaaaataacaaaataaagtatagcggggaacc
MLN01_0098_B03.b : acgtcttggttaaaataccaaattgggtagcgggaaacccaacgggatgataaggttttt
OVR01_0047_F02.b : gcttttttaccctttgaaaacttttaagaaaaaattttaaagggaagtggtcccctttaa
LNG01_0064_F09.b : gcaatttcagacaatttcctcccacggtctgtgtttaatataccaaaatatgaaggcggg
CLNT1_0034_H08.b : taaaccaattttcccccaagttcttgggtttaaattaccaaaatagggattgggggggaa
BFLT1_0039_C08.b : gaatttcaaccaattttcctccaaaggtctttgttttatattaccaaaaaagtaaaggcc
UTR01_0066_E09.b : tttggaatttttaaaaaaatttaaaggggg                             
CLNT1_0082_E06.b : ttccaagattcttgttaatatatataaaaatgggaggcgggggaaaccaaaccggaaaaa
KDN01_0094_F02.b : aagggaattcaaaccattattcttcccacgttctttgtttaaaatttaccaaaaaatgga


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b : tttttataaaaaaaaaaaaaaaa                                    
BMWN1_0027_D11.b : tatgtgttccgggggagaacccaccccggaaaaaaaaaattgttttttttaaaaaaaaaa
CBLT1_0054_F02.b : caaaccggaaggaaaaatggtaatcttgtttgtnnaaaaaananaaaaaaaaaaaaaaan
MLN01_0098_B03.b : cggtttgaaaaaaaaaaaggcaatggcaatttggtgcgccctaataccgggggccttcta
OVR01_0047_F02.b : aaaaagggggaaaatttttttcttaaaaaaccaacccaaaatttt              
LNG01_0064_F09.b : gaaaccaatccgggatgaaaaaggtttatctgtgttgaaaaaaaaaaaagccaattgttc
CLNT1_0034_H08.b : acccaaccggaaagaaaaaaggttattcttggttttaaaaaaaaaaaaaagccccttgtt
BFLT1_0039_C08.b : gggaaaacccaaaccgaaagaaaaaagtttattttgggtgtaaaaaaaaaaaaggcaatg
UTR01_0066_E09.b :                                                             
CLNT1_0082_E06.b : aaaaggtatttttgggtgtaaaaaaaaaaaaagcagggtgcaggtggggggggcgaaaat
KDN01_0094_F02.b : agccggggaaaacccaaaaccggaatgaaaaaagtttaatcctggtttggaaaaaaaaaa


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b :                                                             
BMWN1_0027_D11.b : aaaaaaaaaaaaa                                              
CBLT1_0054_F02.b : nnnnnnnnnnnanannnnnnnnnnnnncaaaacccccggcccctcctctgggggtttttc
MLN01_0098_B03.b : ccacttt                                                    
OVR01_0047_F02.b :                                                             
LNG01_0064_F09.b : agctgagtcggccctctaaattcctaggggcaattaccacacactttgtaaagtcccaag
CLNT1_0034_H08.b : ttattagtggggcccccaaatataagaaaaaccccccctccccgggcagaaaaaag   
BFLT1_0039_C08.b : ttctaattgaggggggccctaaatattaaaaaaccccccccccccaaagaaaaaaaagaa
UTR01_0066_E09.b :                                                             
CLNT1_0082_E06.b : aaaaaaaaaccccccccccgaggaaaaaaaagagatgtgggtttttttgggcttggggaa
KDN01_0094_F02.b : aaagcccatttgtccattgaggtcgggccctaataattaaaaaaaaccccccccccccca


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b :                                                             
BMWN1_0027_D11.b :                                                             
CBLT1_0054_F02.b : cccaaaaaaaatttggtggcccccccgttgtgtttt                       
MLN01_0098_B03.b :                                                             
OVR01_0047_F02.b :                                                             
LNG01_0064_F09.b : ggataaaacaggcggcgcttttacgtggaggaaaggat                     
CLNT1_0034_H08.b :                                                             
BFLT1_0039_C08.b : atgtgtttttatcttttccccctaggggcaaaaaacccctaatttcaat          
UTR01_0066_E09.b :                                                             
CLNT1_0082_E06.b : aaagaacacattaaaaatttttcgtgtggggggaacaagttatt               
KDN01_0094_F02.b : accgaaaaaaaggagcatggtttggtatgtttttgccctaaggttaaaaagaagccccaa


20110601C-013800 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 992
LNG01_0031_D11.b :                                                             
BMWN1_0027_D11.b :                                                             
CBLT1_0054_F02.b :                                                             
MLN01_0098_B03.b :                                                             
OVR01_0047_F02.b :                                                             
LNG01_0064_F09.b :                                                             
CLNT1_0034_H08.b :                                                             
BFLT1_0039_C08.b :                                                             
UTR01_0066_E09.b :                                                             
CLNT1_0082_E06.b :                                                             
KDN01_0094_F02.b : ttccaaaagctttttccgcctaaggggtgtcacaaga