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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013833

Length: 881

Sequence [FASTA format sequence]
GGCGAGAAGG GGCGGTTGCC GTAGCGGAGC CCTCTGGCTG TGTGTGTCTG AGGATCCGCC
GCCAGAGCTG CGGACGGTTT GCTGAGCCCG TTAGTGTCCG TGCTGAGACT TACGCCGCAG
TCATGTCTCG GTATCTGCGT CCCCCCAATA CGTCTCTGTT CGTAAGGAAC GTGGCCGACG
ATACCAGGTC TGAAGATTTG CGACGTGAAT TTGGTCGTTA TGGTCCTATA GTTGATGTGT
ATGTTCCACT TGATTTCTAC ACTCGTCGTC CAAGAGGATT TGCATATGTT CAATTTGAGG
ATGTTCGTGA TGCTGAAGAT GCTTTGCATA ATTTGGACAG AAAATGGATT TGTGGACGCC
AAATTGAAAT ACAGTTCGCA CAGGGGGATC GGAAGACTCC AAATCAGATG AAAGCAAAGG
AAGGGAGAAA TGTGTACAGT TCTTCACGCT ATGATGATTA TGACAGATAT AGGCGTTCTA
GAAGCCGAAG TTACGAAAGA AGGAGATCAA GAAGTCGGTC CTTTGATTAC AACTATAGAC
GATCTTATAG CCCTAGAAAC AGTAGACCGA CTGGAAGACC ACGGCGTAGC AGAAGCCATT
CCGACAATGA TAGACCAAAC TGCAGCTGGA ATACCCAGTA CAGTTCTGCT TACTACACTT
CAAGAAAGAT CTGAGAAAGC GGAAAAAGAA CCAAAGAAGG GCAGTTCAAG CGACCAAAGG
GTGGGTGGAA GGTGCTGCAG TATGAATACT GTACGAATAT TTTGACTCTG GTCTGAAAAG
ATAAAAGAAT GTTATCGAAA CTACATGGAA TAATTGAAGT CCCTTTCAGT TTTGAAGTAG
CATTTTAGGA CAATAAAAAG AAATTCACTT TGTACTTGTG G


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100505793PREDICTED: serine/arginine-rich splicing factor 10-like [Homo sapiens]. 2479e-66O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]. 2479e-66O
Contig/Assembly ProteinLOC100505793PREDICTED: serine/arginine-rich splicing factor 10-like [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinLOC100505793PREDICTED: serine/arginine-rich splicing factor 10-like [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinLOC100505793PREDICTED: serine/arginine-rich splicing factor 10-like [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]. 2186e-57O
Contig/Assembly ProteinSRSF10serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]. 2186e-57O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSrsf10serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]. 2477e-66O
Contig/Assembly ProteinSrsf10serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]. 2185e-57O
Contig/Assembly ProteinSrsf2serine/arginine-rich splicing factor 2 [Mus musculus]. 78.28e-15O
Contig/Assembly ProteinSrsf3serine/arginine-rich splicing factor 3 [Mus musculus]. 726e-13O
Contig/Assembly ProteinSrsf7serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]. 68.95e-12O
Contig/Assembly ProteinSrsf7serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]. 68.95e-12O
Contig/Assembly ProteinSrsf7serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]. 68.95e-12O
Contig/Assembly ProteinSrsf7serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]. 68.95e-12O
Contig/Assembly ProteinLOC100502754PREDICTED: serine/arginine-rich splicing factor 3-like [Mus musculus]. 672e-11O
Contig/Assembly ProteinLOC100502754PREDICTED: serine/arginine-rich splicing factor 3-like [Mus musculus]. 672e-11O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC490173PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 [Canis familiaris]. 2287e-60O
Contig/Assembly ProteinLOC474992PREDICTED: similar to 35 kDa SR repressor protein (SRrp35) [Canis familiaris]. 1502e-36
Contig/Assembly ProteinLOC610494PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 isoform 5 [Canis familiaris]. 1224e-28O
Contig/Assembly ProteinLOC610494PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 isoform 4 [Canis familiaris]. 1224e-28O
Contig/Assembly ProteinLOC610494PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 isoform 6 [Canis familiaris]. 1224e-28O
Contig/Assembly ProteinLOC610494PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 isoform 2 [Canis familiaris]. 1224e-28O
Contig/Assembly ProteinLOC610494PREDICTED: similar to FUS interacting protein (serine-arginine rich) 1 isoform 1 [Canis familiaris]. 1224e-28O
Contig/Assembly ProteinLOC612817PREDICTED: similar to Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) isoform 4 [Canis familiaris]. 78.21e-14O
Contig/Assembly ProteinLOC612817PREDICTED: similar to Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) isoform 3 [Canis familiaris]. 78.21e-14O
Contig/Assembly ProteinLOC612817PREDICTED: similar to Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing component, 35 kDa) isoform 5 [Canis familiaris]. 78.21e-14O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSFRS13Asplicing factor, arginine/serine-rich 13A [Bos taurus]. 2186e-57O
Contig/Assembly ProteinFUSIP1PREDICTED: FUS interacting protein (serine-arginine rich) 1-like [Bos taurus]. 2132e-55O
Contig/Assembly ProteinFUSIP1PREDICTED: FUS interacting protein (serine-arginine rich) 1 [Bos taurus]. 2132e-55O
Contig/Assembly ProteinSFRS13BPREDICTED: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos taurus]. 1878e-48O
Contig/Assembly ProteinSFRS13BPREDICTED: serine-arginine repressor protein, partial [Bos taurus]. 1878e-48O
Contig/Assembly ProteinSRSF2serine/arginine-rich splicing factor 2 [Bos taurus]. 78.29e-15O
Contig/Assembly ProteinLOC786295PREDICTED: splicing factor, arginine/serine-rich 3 [Bos taurus]. 726e-13O
Contig/Assembly ProteinSRSF3serine/arginine-rich splicing factor 3 [Bos taurus]. 726e-13O
Contig/Assembly ProteinLOC786295PREDICTED: splicing factor, arginine/serine-rich 3-like [Bos taurus]. 726e-13O
Contig/Assembly ProteinSRSF7serine/arginine-rich splicing factor 7 [Bos taurus]. 68.95e-12O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSRSF12splicing factor, arginine/serine-rich 13B [Sus scrofa]. 1944e-50O
Contig/Assembly ProteinLOC100625186PREDICTED: serine/arginine-rich splicing factor 10-like [Sus scrofa]. 1922e-49
Contig/Assembly ProteinSRSF2serine/arginine-rich splicing factor 2 [Sus scrofa]. 78.26e-15O
Contig/Assembly ProteinLOC100523801PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]. 724e-13O
Contig/Assembly ProteinLOC100523801PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]. 724e-13O
Contig/Assembly ProteinLOC100518189PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2 [Sus scrofa]. 68.93e-12O
Contig/Assembly ProteinLOC100518189PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1 [Sus scrofa]. 68.93e-12O
Contig/Assembly ProteinTRA2Btransformer-2 protein homolog beta [Sus scrofa]. 63.22e-10
Contig/Assembly ProteinCIRBPPREDICTED: cold-inducible RNA-binding protein isoform 2 [Sus scrofa]. 62.82e-10O
Contig/Assembly ProteinCIRBPPREDICTED: cold-inducible RNA-binding protein isoform 3 [Sus scrofa]. 62.82e-10O


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010005D07AMP01_0005_D07.bBW955313 
AMP010026D09AMP01_0026_D09.bBW956945 
AMP010027E12AMP01_0027_E12.bBW957042 
AMP010035G09AMP01_0035_G09.bBW957557 
AMP010100F11AMP01_0100_F11.bBW962502 AK231145
BKFL10070H04BKFL1_0070_H04.bFS652641 
CBLT10008F06CBLT1_0008_F06.bHX212368 
DCI010018C03DCI01_0018_C03.bDB791881 
HTMT10073A02HTMT1_0073_A02.bFS669360 AK392424

  

SNPs: 3      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
164A500.556WSGTA/V
G400.444GTG/V
212C200.222WSTTC/F
T700.778TTT/F
540A500.556WSAGA/R
C400.444CGA/R


Alignment:      TOP

20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
HTMT1_0073_A02.b :
AMP01_0100_F11.b : ggggtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0008_F06.b :
BKFL1_0070_H04.b : nnngggtataannnnnnccgatatctatgggctaxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0005_D07.b : attttgcgtatcttxxxxxxxxxxxxxxxxx
AMP01_0026_D09.b : tttaaccgaacttxxxxxxxxxxxxxxx
AMP01_0027_E12.b : ntttatcgaatcttxxxxxxxxxxxxxxx
DCI01_0018_C03.b : nnnaa
AMP01_0035_G09.b :
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
HTMT1_0073_A02.b : nttttagacggtacga
AMP01_0100_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CBLT1_0008_F06.b : ttttng
BKFL1_0070_H04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0005_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0026_D09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0027_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0018_C03.b : gtaacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0035_G09.b : ggaaatcttnaggggatatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013833 : ............................................GGCGAGAAGGGGCGGT
---------+---------+---------+---------+---------+---------+ 16
HTMT1_0073_A02.b : ggccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGCGAGAAGGGGCGGT
AMP01_0100_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGT
CBLT1_0008_F06.b : gcaggagaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxggCGGT
BKFL1_0070_H04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGT
AMP01_0005_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0026_D09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0027_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0018_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0035_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013833 : TGCCGTAGCGGAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
---------+---------+---------+---------+---------+---------+ 76
HTMT1_0073_A02.b : TGCCGTAGCGGAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
AMP01_0100_F11.b : TGCCGTAGCGGAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
CBLT1_0008_F06.b : TGCCGTAGCGGAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
BKFL1_0070_H04.b : TGCCGTAGCGGAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
AMP01_0005_D07.b : xxxxxxxxxxxAGCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
AMP01_0026_D09.b : xxxxxxxxxxxxxCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
AMP01_0027_E12.b : xxxxxxxxxxxxxCCCTCTGGCTGTGTGTGTCTGAGGATCCGCCGCCAGAGCTGCGGACG
DCI01_0018_C03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGATCCGCCGCCAGAGCTGCGGACG
AMP01_0035_G09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGCTGCGGACG
20110601C-013833 : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
---------+---------+---------+---------+---------+---------+ 136
HTMT1_0073_A02.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
AMP01_0100_F11.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
CBLT1_0008_F06.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
BKFL1_0070_H04.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
AMP01_0005_D07.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
AMP01_0026_D09.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
AMP01_0027_E12.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
DCI01_0018_C03.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
AMP01_0035_G09.b : GTTTGCTGAGCCCGTTAGTGTCCGTGCTGAGACTTACGCCGCAGTCATGTCTCGGTATCT
20110601C-013833 : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
---------+---------+---------+---------+---------+---------+ 196
HTMT1_0073_A02.b : GCGTCCCCCCAATACGTCTCTGTTCGTGAGGAACGTGGCCGACGATACCAGGTCTGAAGA
AMP01_0100_F11.b : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
CBLT1_0008_F06.b : GCGTCCCCCCAATACGTCTCTGTTCGTGAGGAACGTGGCCGACGATACCAGGTCTGAAGA
BKFL1_0070_H04.b : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
AMP01_0005_D07.b : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
AMP01_0026_D09.b : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
AMP01_0027_E12.b : GCGTCCCCCCAATACGTCTCTGTTCGTAAGGAACGTGGCCGACGATACCAGGTCTGAAGA
DCI01_0018_C03.b : GCGTCCCCCCAATACGTCTCTGTTCGTGAGGAACGTGGCCGACGATACCAGGTCTGAAGA
AMP01_0035_G09.b : GCGTCCCCCCAATACGTCTCTGTTCGTGAGGAACGTGGCCGACGATACCAGGTCTGAAGA
20110601C-013833 : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
---------+---------+---------+---------+---------+---------+ 256
HTMT1_0073_A02.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
AMP01_0100_F11.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
CBLT1_0008_F06.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
BKFL1_0070_H04.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
AMP01_0005_D07.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
AMP01_0026_D09.b : TTTGCGACGTGAATTCGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
AMP01_0027_E12.b : TTTGCGACGTGAATTCGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
DCI01_0018_C03.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
AMP01_0035_G09.b : TTTGCGACGTGAATTTGGTCGTTATGGTCCTATAGTTGATGTGTATGTTCCACTTGATTT
20110601C-013833 : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
---------+---------+---------+---------+---------+---------+ 316
HTMT1_0073_A02.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
AMP01_0100_F11.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
CBLT1_0008_F06.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
BKFL1_0070_H04.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
AMP01_0005_D07.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
AMP01_0026_D09.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
AMP01_0027_E12.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
DCI01_0018_C03.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
AMP01_0035_G09.b : CTACACTCGTCGTCCAAGAGGATTTGCATATGTTCAATTTGAGGATGTTCGTGATGCTGA
20110601C-013833 : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
---------+---------+---------+---------+---------+---------+ 376
HTMT1_0073_A02.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
AMP01_0100_F11.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
CBLT1_0008_F06.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
BKFL1_0070_H04.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
AMP01_0005_D07.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
AMP01_0026_D09.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
AMP01_0027_E12.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
DCI01_0018_C03.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
AMP01_0035_G09.b : AGATGCTTTGCATAATTTGGACAGAAAATGGATTTGTGGACGCCAAATTGAAATACAGTT
20110601C-013833 : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
---------+---------+---------+---------+---------+---------+ 436
HTMT1_0073_A02.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
AMP01_0100_F11.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
CBLT1_0008_F06.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
BKFL1_0070_H04.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
AMP01_0005_D07.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
AMP01_0026_D09.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
AMP01_0027_E12.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
DCI01_0018_C03.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
AMP01_0035_G09.b : CGCACAGGGGGATCGGAAGACTCCAAATCAGATGAAAGCAAAGGAAGGGAGAAATGTGTA
20110601C-013833 : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
---------+---------+---------+---------+---------+---------+ 496
HTMT1_0073_A02.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
AMP01_0100_F11.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
CBLT1_0008_F06.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
BKFL1_0070_H04.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
AMP01_0005_D07.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
AMP01_0026_D09.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
AMP01_0027_E12.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
DCI01_0018_C03.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
AMP01_0035_G09.b : CAGTTCTTCACGCTATGATGATTATGACAGATATAGGCGTTCTAGAAGCCGAAGTTACGA
20110601C-013833 : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGACGATCTTATAGCCCTAG
---------+---------+---------+---------+---------+---------+ 556
HTMT1_0073_A02.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGACGATCTTATAGCCCTAG
AMP01_0100_F11.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGAAGATCTTATAGCCCTAG
CBLT1_0008_F06.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGACGATCTTATAGCCCTAG
BKFL1_0070_H04.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGAAGATCTTATAGCCCTAG
AMP01_0005_D07.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGAAGATCTTATAGCCCTAG
AMP01_0026_D09.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGAAGATCTTATAGCCCTAG
AMP01_0027_E12.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGAAGATCTTATAGCCCTAG
DCI01_0018_C03.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGACGATCTTATAGCCCTAG
AMP01_0035_G09.b : AAGAAGGAGATCAAGAAGTCGGTCCTTTGATTACAACTATAGACGATCTTATAGCCCTAG
20110601C-013833 : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
---------+---------+---------+---------+---------+---------+ 616
HTMT1_0073_A02.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
AMP01_0100_F11.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
CBLT1_0008_F06.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
BKFL1_0070_H04.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
AMP01_0005_D07.b : AAA***TAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
AMP01_0026_D09.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
AMP01_0027_E12.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
DCI01_0018_C03.b : AAA***TAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
AMP01_0035_G09.b : AAACAGTAGACCGACTGGAAGACCACGGCGTAGCAGAAGCCATTCCGACAATGATAGACC
20110601C-013833 : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGA
---------+---------+---------+---------+---------+---------+ 676
HTMT1_0073_A02.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGA
AMP01_0100_F11.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAA*GATCTGAGA
CBLT1_0008_F06.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGA
BKFL1_0070_H04.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTNCAGAAAGATCTGAGA
AMP01_0005_D07.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGA
AMP01_0026_D09.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGACCTGAGA
AMP01_0027_E12.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGACCTGAGA
DCI01_0018_C03.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTTCAGAAAGATCTGAGA
AMP01_0035_G09.b : AAACTGCAGCTGGAATACCCAGTACAGTTCTGCTTACTACACTTCAAGAAAGATCTGAGA
20110601C-013833 : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGGGTGGAAGGTGCT
---------+---------+---------+---------+---------+---------+ 736
HTMT1_0073_A02.b : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGGGTGGAAGGTGCT
AMP01_0100_F11.b : AAGCGGAAAAAGAACCAAAGAAGGCCAGTTCAAGCGAACCAAGGGTTGGGTGAAGGTGCT
CBLT1_0008_F06.b : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGGGTGGAAGGTGCT
BKFL1_0070_H04.b : AAGCGGAAAAAGAACCAAAGAAAGGCAGTTTCAGCGACCAAAGGGTGGGTGGAAGGTGCT
AMP01_0005_D07.b : AAGCGGAAAAAGAACCAAAGAAAGGCAGTTCAAGCGACCAAAGGGTGGGTGGAAAGTGCT
AMP01_0026_D09.b : AAGCGGAAAAAGAACCAAAGAAAGGCAGTTCAAGCGACCAAAGGGTGAGTGGAAGGTGCT
AMP01_0027_E12.b : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGAGTGGAAAGTGCT
DCI01_0018_C03.b : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCCAGCGACCCAAGGGTGGGTGGAAGGTGCT
AMP01_0035_G09.b : AAGCGGAAAAAGAACCAAAGAAGGGCAGTTCAAGCGACCAAAGGGTGGGTGGAACGTGCT
20110601C-013833 : GCAGTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGTTATC
---------+---------+---------+---------+---------+---------+ 796
HTMT1_0073_A02.b : GCAGTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGTTATC
AMP01_0100_F11.b : GCATTATGAATACTGTACCAATATTTGGACTCTtggcctgaaagaataaaaaatgttttc
CBLT1_0008_F06.b : GCAGTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGTTATC
BKFL1_0070_H04.b : GCANTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAGNATAAA*GAATGTTATC
AMP01_0005_D07.b : GCAGTATGGATACTGTACGAATATTTTGACTCCGGTCTGAAAAGAATAAAGAATGTTATC
AMP01_0026_D09.b : GCAGTATGAACACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGGTATC
AMP01_0027_E12.b : GCAGTATGAACACTGTACGAATATTTTGACTCTGGTCTGAAAAGATTAAAGAATGTTATC
DCI01_0018_C03.b : GCAATATGAATACTGTACGAATATTTTGACTCTGGgtctgaaagataaagaatgttatcg
AMP01_0035_G09.b : GCANTATGAATACTGTACGAATATTTTGACTCTGGTCTGAAAAGATAAAAGAATGTTATC
20110601C-013833 : GAAACTACATGGAATAATTGAAGTCCCTTTCAGTTTTGAAGTAGCATTTTAGGACAATAA
---------+---------+---------+---------+---------+---------+ 856
HTMT1_0073_A02.b : GAAACTACATGGAATAATTGAAagtccttttcagtttgaagtagcattttanngacaaat
AMP01_0100_F11.b : aaacctactggattaatttgaatccctttcagtttgaaagtaagcttttaagacaaataa
CBLT1_0008_F06.b : GAAACTACATGGAATAAATTGAGTCCCCTTCAGTTTTGAAGTAGCATTTTAGGACAATAA
BKFL1_0070_H04.b : GAAACTACAtggaattattgaagtccctttcaagttgaaagtagcattttaggacaaata
AMP01_0005_D07.b : GAAACTACATGGAATAATTGAAgttcccttccattttgaaataaacctttttagaccaat
AMP01_0026_D09.b : GAAACTActtggaataattgaagtcccctcaagttgaaagtaagcattttaggacaaata
AMP01_0027_E12.b : GAAACTACAtggaataattgaagtccctttcagtttgaagtaagcattttaggacaaata
DCI01_0018_C03.b : aaactacatgaaatatttgagtccttccagttttgaagttagcttttaggacaattaaag
AMP01_0035_G09.b : GACACTACATGGAATAATTGCAGTCCCTTtcagtttttgaagtagcttttaggacaataa
20110601C-013833 : AAAGAAATTCACTTTGTACTTGTGG...................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : aaaggaaatcaactttgtacttgtggaactcatccctaatctgaataggttatactgatt
AMP01_0100_F11.b : aagggaaattcactttggactttggggaaacccctccccaaatttcgaaataggtttaac
CBLT1_0008_F06.b : AAAGAAATTCACTTTGTACTTGTGGgaactcatccctaatctgaataagttatactgaat
BKFL1_0070_H04.b : aaaagaattttcaacttgtacttgggaaanctctccctaantccgaatggttnataactg
AMP01_0005_D07.b : aaaaggaaattcaacttttgtccttgtggaaaccattcccaaatctgaataggtttaact
AMP01_0026_D09.b : aaaggaaattcactttgtacttgtggaaactcctccctaaatctgaataggttatactga
AMP01_0027_E12.b : aaaagaaattcactttgtactttgtggaactcatccctaatctgaaatagtttaactgat
DCI01_0018_C03.b : gaattcactttgtactgggaaccctctcccaacccgaaaagtttaacggatcctgggtac
AMP01_0035_G09.b : aaggaaattcactttgtacttgtggaactcatccctaantctgataggttatactgattc
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : catgggaacaggtccatgttnaattattggaaactagatgtctgaatgtcaggnaaaang
AMP01_0100_F11.b : tggattctggggtaaaaggtccatggttaatttattgaaaactaggaagttctgaatggt
CBLT1_0008_F06.b : catgggtaccagtccatgtaaattatggaaacaggatgtctgaatgttaggagaaagcca
BKFL1_0070_H04.b : atcatgggtacaggtccatgtaaattattgaaactaggatgctgatgtcaaggaaacagc
AMP01_0005_D07.b : gattcatggtaacaggtcctgtttaatattgaaactaggtgtctaaatgtcaggaaaaca
AMP01_0026_D09.b : atcatgggtaacagtcatgttaaataatggaaactaagagtctgaatgtcaggagaaagc
AMP01_0027_E12.b : tcatgggtaacgggtcctgttaaattttggaaactaagatgtccgaatgtcaaggaaaac
DCI01_0018_C03.b : aggccctgtaattattgaaactagatgctgaagtcaagaaaaaccctatcccttaaggcc
AMP01_0035_G09.b : atggggtacaggtcatgtttaattatggaaactaggagtctgatgtcaaggagacagcca
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : ccatagtctcttacatgcccctattgttctgtctcaactgattgggggaaaaaaagtttg
AMP01_0100_F11.b : caggaaaaacacccatattcccttaagggccccctattggttcgttttaaactggatttg
CBLT1_0008_F06.b : aatctcttaacatgctcattggtctgttcaaatgaatgggtgaaaaagtatgtcaaaaaa
BKFL1_0070_H04.b : ttaatcccttaaggcctctatggtctgtctcacggattggggaaaaagtatggcccataa
AMP01_0005_D07.b : ccatatcctctacggcctccttggtcctgtctaaatgatttgggagaaaggttgtcccaa
AMP01_0026_D09.b : cttttctcttacgtgcccccattggtctgtcccaactgattgggtaaaaaaagttgggcc
AMP01_0027_E12.b : gcccaatccccttcaggcctcctttggccgtctcaaactaattgggt
DCI01_0018_C03.b : ccattgctcgcccaacgattggtgaaaaaggttgtcattaaatttctggttctttaagcc
AMP01_0035_G09.b : tatctctacagtgctctatggtctgtccaaactgattgggtgagaaaggtatggccanta
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : gcccagaaaaactttcttgttatcttttaaagccgttctattttgcgttggcaatctggc
AMP01_0100_F11.b : gtgggaaaaaaaggatggtcccagtttaaactttttttgggtttcttttttaaagccctt
CBLT1_0008_F06.b : acttctggttaactttaagccgttcatttggcgtgggaatctgccttgttatcaggccag
BKFL1_0070_H04.b : aactccttggtcctttaggacattctattttcgttgcgacttgccttgttatccaggccc
AMP01_0005_D07.b : ttaactttttggtattttaaggcgcttttttttctgtggaaactggctttttt
AMP01_0026_D09.b : ataaaactttctggttcctttaaaccattcaattttgcggtggcaacctgcctttttt
AMP01_0027_E12.b :
DCI01_0018_C03.b : accattttgcgtggcaactgcctgtttttccggccggtttccctaaggttgtttgggcca
AMP01_0035_G09.b : taactttctgggtacttttaagcatttcatttttgcgtgggcaatctgcctttttattcc
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : tttttttttccaggccaaggtttccccttaaggtttgtttttgggccgaaattacttccg
AMP01_0100_F11.b : tcttttttttttccttttggggaaaacttttgccccttttttttttttttcccaggggcc
CBLT1_0008_F06.b : tttcccttaggtttgttgtggcccgatttcttacggtgccaaggggttaatctcccaaac
BKFL1_0070_H04.b : gttccccacaggtggctttggcccgaataatccggggccagggttattcccaaccccccc
AMP01_0005_D07.b :
AMP01_0026_D09.b :
AMP01_0027_E12.b :
DCI01_0018_C03.b : aattttccggggccaggttatttcccaacccccaattcttaattgaccccagggcccctc
AMP01_0035_G09.b : gggcccgggtttcccttaagggttggttt
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : gtgggcccgggggtttatcttcctaaacccccccggtaatcccttttttttggcccccct
AMP01_0100_F11.b : ccgggtttttttccctcttttagggggtgtttgttttttgtgtttggggcgctccctgga
CBLT1_0008_F06.b : ccccagaaatcattataactggccccccaaagggccccctcccccttccaacatatgaca
BKFL1_0070_H04.b : atatctttaattgaccccaaggctctcccccttccatattacaattgccgggggaatggg
AMP01_0005_D07.b :
AMP01_0026_D09.b :
AMP01_0027_E12.b :
DCI01_0018_C03.b : ccctttctatttacaattgccctgggatatggggggaaaaaaaatttttcgcccaaaaac
AMP01_0035_G09.b :
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b : taagggccccccttcccctttcccaacataa
AMP01_0100_F11.b : aggtattattttttttactccccg
CBLT1_0008_F06.b : atttcgcacctgtggaaaattggggatgggaaaaagaaaaacttcaaagttctggccact
BKFL1_0070_H04.b : tgggaaagaactttatccacccaaaccctttgttttcctcttacccaaaaaccccctttg
AMP01_0005_D07.b :
AMP01_0026_D09.b :
AMP01_0027_E12.b :
DCI01_0018_C03.b : gcggtttggttatttttttaaaaaaaaattnnaannnnnnnttttttttaaaaccccgtc
AMP01_0035_G09.b :
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b :
AMP01_0100_F11.b :
CBLT1_0008_F06.b : gaaataagggccttgtttggggaatattccctcccaaaaaaccaccaaaaatggttttca
BKFL1_0070_H04.b : gtg
AMP01_0005_D07.b :
AMP01_0026_D09.b :
AMP01_0027_E12.b :
DCI01_0018_C03.b : tcagtgccctatnnnnnt
AMP01_0035_G09.b :
20110601C-013833 : ............................................................
---------+---------+---------+---------+---------+---------+ 881
HTMT1_0073_A02.b :
AMP01_0100_F11.b :
CBLT1_0008_F06.b : aaaatttccccaaaaaaagttttttttttaaaaaaacaaaaaac
BKFL1_0070_H04.b :
AMP01_0005_D07.b :
AMP01_0026_D09.b :
AMP01_0027_E12.b :
DCI01_0018_C03.b :
AMP01_0035_G09.b :