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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013971

Length: 1,082

Sequence [FASTA format sequence]
CAAGGGCAAG AGCAAAGAAC ACCACAGTTT AATCTTCATC ACAGGGCCAA GGTCCCTTCA
AAAGAGATTA AAGTAGACCT AGCTAATTGT TCACTTTATG AGTCAGAGAG TCAGAAGTTA
TTAGCAGGGA CTGTTATAAA AAAGCTTTAG ATTTCAGGCT CCCAGTTGTC TAAGTAAGAA
GAGAGGGCAT CATGGATGGG GCTGTGGTCC TGGTGCTCTG TCTCTCCTGT CTGCTTCTCC
TCTCACTCTG GAAACAGAAC TCTGGGAAGG GGAGGCTCCC GCCTGGCCCG ACTCCTCTCT
CAATTCTTGG AAATATCCTA CAGTTAGATG TTAAGGACAT CAGCAAATCC TTAAGCAACC
TCTCAAAAGT CTATGGCCCT GTATTCACCG TGTATTTTGG CTTGAAGCCT GCTGTTGTGT
TGCATGGCTA TGAAGCAGTA AAAGAAGCCC TAATTGATGG GGGAGAGGAA TTTTCTGGAA
GGGGCCATTT CCCAATGGCT GAGAGAGTTA ATAAAGGGCA TGGAATCATC TTCAGCAGTG
GAAAGAGATG GAAGGAGACC CGGCGCTTCT CCCTCATGAC CCTGCGGAAT TTTGGGATGG
GGAAGAGAAG CATTGAGGAA CGGGTTCAAG AGGAAGCCCG CTGCCTTGTG GAGGAGTTGA
GAAAAACCAA TGCTTCACCC TGTGATCCCA CTTTCCTCCT GGGCTGTGCT CCCTGCAATG
TGATCTGCTC CATCATTTTC CACAATCGTT TTGATTATAC AGATCCAAAT TTTCTTACCT
TGTTGGAAAA ACTAAATGAA AACTTCAGGA TTCTGAGCTC CCCGTGGATC CAGGTCTGCA
ATAATTTCCC TGCTCTGATT GACTATCTCC CAGGGAGTCA TAACAAAGTG CTTAAAAATT
CTGCTTATGT AAAAAGCTAT ATTTTGGAGA AAGTAAAAGA ACATCAAGCA TCCCTGGATG
TTAATGACCC TCGGGACTTC ATTGATTGTT TTCTGATCCA AATGGAACAG GAAAAACACA
ATCACCAAGG TGGGCATTTT ACTTTTTGAA AACTTGATAA CCACTATAAC TGAACTTGTT
TT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP2C18cytochrome P450 2C18 isoform 1 [Homo sapiens]. 463e-130O
Contig/Assembly ProteinCYP2C9cytochrome P450 2C9 [Homo sapiens]. 453e-127O
Contig/Assembly ProteinCYP2C19cytochrome P450 2C19 [Homo sapiens]. 446e-125O
Contig/Assembly ProteinCYP2C8cytochrome P450 2C8 isoform a [Homo sapiens]. 426e-119O
Contig/Assembly ProteinCYP2C18cytochrome P450 2C18 isoform 2 [Homo sapiens]. 3501e-96O
Contig/Assembly ProteinCYP2C8cytochrome P450 2C8 isoform b [Homo sapiens]. 3478e-96O
Contig/Assembly ProteinCYP2C8cytochrome P450 2C8 isoform b [Homo sapiens]. 3478e-96O
Contig/Assembly ProteinCYP2E1cytochrome P450 2E1 [Homo sapiens]. 3141e-85O
Contig/Assembly ProteinCYP2C8cytochrome P450 2C8 isoform c [Homo sapiens]. 2919e-79O
Contig/Assembly ProteinCYP2F1cytochrome P450 2F1 [Homo sapiens]. 2871e-77O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCyp2c66cytochrome P450, family 2, subfamily c, polypeptide 66 [Mus musculus]. 414e-116O
Contig/Assembly ProteinCyp2c65cytochrome P450, family 2, subfamily c, polypeptide 65 [Mus musculus]. 412e-115O
Contig/Assembly ProteinCyp2c29cytochrome P450 2C29 [Mus musculus]. 409e-114O
Contig/Assembly ProteinCyp2c55cytochrome P450 2C55 [Mus musculus]. 404e-113O
Contig/Assembly ProteinCyp2c39cytochrome P450 2C39 [Mus musculus]. 403e-112O
Contig/Assembly ProteinCyp2c38cytochrome P450 2C38 [Mus musculus]. 402e-112O
Contig/Assembly ProteinCyp2c50cytochrome P450 2C50 isoform 1 [Mus musculus]. 393e-109O
Contig/Assembly ProteinCyp2c37cytochrome P450 2C37 [Mus musculus]. 392e-109O
Contig/Assembly ProteinCyp2c54cytochrome P450 2C54 [Mus musculus]. 388e-108O
Contig/Assembly ProteinCyp2c44cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 2 [Mus musculus]. 3524e-97O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP2C41cytochrome P450 2C41 [Canis lupus familiaris]. 414e-116O
Contig/Assembly ProteinCYP2C19cytochrome P450 2C21 [Canis lupus familiaris]. 369e-102O
Contig/Assembly ProteinLOC612477PREDICTED: similar to cytochrome P450, family 2, subfamily F, polypeptide 1 [Canis familiaris]. 2911e-78
Contig/Assembly ProteinLOC484492PREDICTED: similar to Cytochrome P450 2G1 (CYPIIG1) (P450-OLF1) (Olfactive) [Canis familiaris]. 2854e-77O
Contig/Assembly ProteinCYP2E1cytochrome P450 2E1 [Canis lupus familiaris]. 2841e-76O
Contig/Assembly ProteinLOC476453PREDICTED: similar to cytochrome P450 monooxygenase CYP2T1 [Canis familiaris]. 2641e-70O
Contig/Assembly ProteinCYP2B6cytochrome P450 2B11 [Canis lupus familiaris]. 2602e-69O
Contig/Assembly ProteinCYPIIB11PREDICTED: cytochrome P450 2B11 [Canis familiaris]. 2602e-69O
Contig/Assembly ProteinCYP2A25hypothetical protein LOC484493 [Canis lupus familiaris]. 2525e-67O
Contig/Assembly ProteinCYP2A13cytochrome P450 family 2 subfamily A polypeptide 13 [Canis lupus familiaris]. 2516e-67O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP2C18cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus]. 463e-130O
Contig/Assembly ProteinLOC505468PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like isoform 1 [Bos taurus]. 446e-125O
Contig/Assembly ProteinLOC505468PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like isoform 2 [Bos taurus]. 446e-125O
Contig/Assembly ProteinCYP2C87cytochrome P450, family 2, subfamily C, polypeptide 87 [Bos taurus]. 433e-121O
Contig/Assembly ProteinLOC540627PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide 87-like isoform 1 [Bos taurus]. 425e-119O
Contig/Assembly ProteinLOC540627PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide 87-like isoform 2 [Bos taurus]. 425e-119O
Contig/Assembly ProteinLOC540627PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide 87-like isoform 2 [Bos taurus]. 423e-118O
Contig/Assembly ProteinCYP2C19cytochrome P450, family 2, subfamily C, polypeptide 19 [Bos taurus]. 374e-104O
Contig/Assembly ProteinLOC785540PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide 19-like isoform 2 [Bos taurus]. 372e-103O
Contig/Assembly ProteinLOC785540PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide 19-like isoform 1 [Bos taurus]. 372e-103O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYP2C49cytochrome P450 2C49 [Sus scrofa]. 536e-153O
Contig/Assembly ProteinCYP2C32PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 2C18 [Sus scrofa]. 517e-147O
Contig/Assembly ProteinCYP2C42cytochrome P450 2C42 [Sus scrofa]. 457e-129O
Contig/Assembly ProteinCYP2C33cytochrome P450 2C33 [Sus scrofa]. 3523e-97O
Contig/Assembly ProteinCYP2E1cytochrome P450 2E1 [Sus scrofa]. 2961e-80O
Contig/Assembly ProteinLOC100522870PREDICTED: cytochrome P450 2G1-like isoform 1 [Sus scrofa]. 2801e-75O
Contig/Assembly ProteinCYP2B22cytochrome P450 2B22 [Sus scrofa]. 2701e-72O
Contig/Assembly ProteinCYP2C36PREDICTED: cytochrome P450 2C18, partial [Sus scrofa]. 2692e-72O
Contig/Assembly ProteinCYP2A19cytochrome P450 2A19 [Sus scrofa]. 2454e-65O
Contig/Assembly ProteinLOC100156823PREDICTED: cytochrome P450 2C26-like [Sus scrofa]. 2092e-54O


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVR010015H05LVR01_0015_H05.bBP447533 
LVR010025A05LVR01_0025_A05.bBP441271 
LVR010036A01LVR01_0036_A01.bBP440963 
LVR010088D03LVR01_0088_D03.bCJ000456 
LVR010105E08LVR01_0105_E08.bBP445125 
LVR010106F03LVR01_0106_F03.bBP445652 AK232657
LVRM10150G02LVRM1_0150_G02.bBP453099 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
723A410.714WNATC/I
G200.286GTC/V


Alignment:      TOP

20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0106_F03.b : ggggtgctagggctttgtgatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0150_G02.b :
LVR01_0036_A01.b :
LVR01_0015_H05.b :
LVR01_0025_A05.b :
LVR01_0088_D03.b :
LVR01_0105_E08.b :
20110601C-013971 : ..................................CAAGGGCAAGAGCAAAGAACACCACA
---------+---------+---------+---------+---------+---------+ 26
LVR01_0106_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAGGGCAAGAGCAAAGAACACCACA
LVRM1_0150_G02.b : cagttgtcxxxxxxxxxxxxxxxxxxxx
LVR01_0036_A01.b : ccttatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0015_H05.b : tatgagcttagtgaaxxxxx
LVR01_0025_A05.b :
LVR01_0088_D03.b :
LVR01_0105_E08.b :
20110601C-013971 : GTTTAATCTTCATCACAGGGCCAAGGTCCCTTCAAAAGAGATTAAAGTAGACCTAGCTAA
---------+---------+---------+---------+---------+---------+ 86
LVR01_0106_F03.b : GTTTAATCTTCATCACAGGGCCAAGGTCCCTTCAAAAGAGATTAAAGTAGACCTAGCTAA
LVRM1_0150_G02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGATTAAAGTAGACCTAGCTAA
LVR01_0036_A01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGATTAAAGTAGACCTAGCTAA
LVR01_0015_H05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0025_A05.b : tttxx
LVR01_0088_D03.b : ct
LVR01_0105_E08.b : gtggttttg
20110601C-013971 : TTGTTCACTTTATGAGTCAGAGAGTCAGAAGTTATTAGCAGGGACTGTTATAAAAAAGCT
---------+---------+---------+---------+---------+---------+ 146
LVR01_0106_F03.b : TTGTTCACTTTATGAATCAGAGAGTCAGAAGTTATTAGCAGGGACTGTTATAAAAAAGCT
LVRM1_0150_G02.b : TTGTTCACTTTATGAGTCAGAGAGTCAGAAGTTATTAGCAGGGACTGTTATAAAAAAGCT
LVR01_0036_A01.b : TTGTTCACTTTATGAGTCAGAGAGTCAGAAGTTATTAGCAGGGACTGTCATAAAAAAGCT
LVR01_0015_H05.b : xxxxxxxCTTTATGAGTCAGAGAGTCAGAAGTTATTAGCAGGGACTGTTATAAAAAAGCT
LVR01_0025_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0088_D03.b : ttggatgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0105_E08.b : ggcttggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013971 : TTAGATTTCAGGCTCCCAGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
---------+---------+---------+---------+---------+---------+ 206
LVR01_0106_F03.b : TTAGATTTCAGGCTCCCAGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVRM1_0150_G02.b : TTAGATTTCAGGCTCCCAGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVR01_0036_A01.b : TTAGATTTCAGGCTCCCAGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVR01_0015_H05.b : TTAGATTTCAGGCTCCCAGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVR01_0025_A05.b : xxxxxxxxxxxxxxxxxxGTTGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVR01_0088_D03.b : xxxxxxxxxxxxxxxxxxxxxGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
LVR01_0105_E08.b : xxxxxxxxxxxxxxxxxxxxxGTCTAAGTAAGAAGAGAGGGCATCATGGATGGGGCTGTG
20110601C-013971 : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
---------+---------+---------+---------+---------+---------+ 266
LVR01_0106_F03.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVRM1_0150_G02.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVR01_0036_A01.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVR01_0015_H05.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVR01_0025_A05.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVR01_0088_D03.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
LVR01_0105_E08.b : GTCCTGGTGCTCTGTCTCTCCTGTCTGCTTCTCCTCTCACTCTGGAAACAGAACTCTGGG
20110601C-013971 : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
---------+---------+---------+---------+---------+---------+ 326
LVR01_0106_F03.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVRM1_0150_G02.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVR01_0036_A01.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVR01_0015_H05.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVR01_0025_A05.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVR01_0088_D03.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
LVR01_0105_E08.b : AAGGGGAGGCTCCCGCCTGGCCCGACTCCTCTCTCAATTCTTGGAAATATCCTACAGTTA
20110601C-013971 : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
---------+---------+---------+---------+---------+---------+ 386
LVR01_0106_F03.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVRM1_0150_G02.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVR01_0036_A01.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVR01_0015_H05.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVR01_0025_A05.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVR01_0088_D03.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
LVR01_0105_E08.b : GATGTTAAGGACATCAGCAAATCCTTAAGCAACCTCTCAAAAGTCTATGGCCCTGTATTC
20110601C-013971 : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
---------+---------+---------+---------+---------+---------+ 446
LVR01_0106_F03.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVRM1_0150_G02.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVR01_0036_A01.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVR01_0015_H05.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVR01_0025_A05.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVR01_0088_D03.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
LVR01_0105_E08.b : ACCGTGTATTTTGGCTTGAAGCCTGCTGTTGTGTTGCATGGCTATGAAGCAGTAAAAGAA
20110601C-013971 : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
---------+---------+---------+---------+---------+---------+ 506
LVR01_0106_F03.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVRM1_0150_G02.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVR01_0036_A01.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVR01_0015_H05.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVR01_0025_A05.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVR01_0088_D03.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
LVR01_0105_E08.b : GCCCTAATTGATGGGGGAGAGGAATTTTCTGGAAGGGGCCATTTCCCAATGGCTGAGAGA
20110601C-013971 : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
---------+---------+---------+---------+---------+---------+ 566
LVR01_0106_F03.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVRM1_0150_G02.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVR01_0036_A01.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVR01_0015_H05.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVR01_0025_A05.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVR01_0088_D03.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
LVR01_0105_E08.b : GTTAATAAAGGGCATGGAATCATCTTCAGCAGTGGAAAGAGATGGAAGGAGACCCGGCGC
20110601C-013971 : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
---------+---------+---------+---------+---------+---------+ 626
LVR01_0106_F03.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVRM1_0150_G02.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVR01_0036_A01.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVR01_0015_H05.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVR01_0025_A05.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVR01_0088_D03.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGGGTT
LVR01_0105_E08.b : TTCTCCCTCATGACCCTGCGGAATTTTGGGATGGGGAAGAGAAGCATTGAGGAACGCGTT
20110601C-013971 : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
---------+---------+---------+---------+---------+---------+ 686
LVR01_0106_F03.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVRM1_0150_G02.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVR01_0036_A01.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVR01_0015_H05.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVR01_0025_A05.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVR01_0088_D03.b : CAAGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
LVR01_0105_E08.b : CAGGAGGAAGCCCGCTGCCTTGTGGAGGAGTTGAGAAAAACCAATGCTTCACCCTGTGAT
20110601C-013971 : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCCATCATTTTCCACAAT
---------+---------+---------+---------+---------+---------+ 746
LVR01_0106_F03.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGGTCTGCTCCATCATTTTCCACAAT
LVRM1_0150_G02.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGNCATGTGATCTGCTCCATCATTTTCCACAAT
LVR01_0036_A01.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGGTCTGCTCCATCATTTTCCACAAT
LVR01_0015_H05.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCCATCATTTTCCACAAT
LVR01_0025_A05.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCCATCATTTTCCACAAT
LVR01_0088_D03.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCCATCATTTTCCACAAT
LVR01_0105_E08.b : CCCACTTTCCTCCTGGGCTGTGCTCCCTGCAATGTGATCTGCTCCATCATTTTCCACAAT
20110601C-013971 : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
---------+---------+---------+---------+---------+---------+ 804
LVR01_0106_F03.b : CGTTTTGATTATACAGATCCAAAATTTTCTTACCTTGTTGGAAAAACTAAATGAAAAACT
LVRM1_0150_G02.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGNTGGAAAAATTAAATGAAA*ACT
LVR01_0036_A01.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
LVR01_0015_H05.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
LVR01_0025_A05.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
LVR01_0088_D03.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
LVR01_0105_E08.b : CGTTTTGATTATACAGATCC*AAATTTTCTTACCTTGTTGGAAAAACTAAATGAAA*ACT
20110601C-013971 : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
---------+---------+---------+---------+---------+---------+ 864
LVR01_0106_F03.b : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
LVRM1_0150_G02.b : TCAGGATTCTGAGCTCCC
LVR01_0036_A01.b : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
LVR01_0015_H05.b : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
LVR01_0025_A05.b : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
LVR01_0088_D03.b : TCAGGATTCTGAGCTCCCCGTGGGTCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
LVR01_0105_E08.b : TCAGGATTCTGAGCTCCCCGTGGATCCAGGTCTGCAATAATTTCCCTGCTCTGATTGACT
20110601C-013971 : ATCTCCCAGGGAGTCATAACAAAGTGCT*TAAAAATTCTGCTTATGTAAAAAGCTATATT
---------+---------+---------+---------+---------+---------+ 923
LVR01_0106_F03.b : ATCTCCCAGGGAGTCATAACAAAGTGCTTTAAAAATTCTGCTTATGTAAAAAGCTATATT
LVRM1_0150_G02.b :
LVR01_0036_A01.b : ATCTCCCAGGGAGTCATAACAAAGTGCT*TAAAAATTCTGCTTATGTAAAAAGCTATATT
LVR01_0015_H05.b : ATCTCCCAGGGAGTCATAACAAAATGCT*TAAAAATTCTGCTTATGTAAAAAGCTATATT
LVR01_0025_A05.b : ATCTCCCAGGGAGTCATAACAAAGTGCT*TAAAAATTCTGCTTATGTAAAAAGCTATATT
LVR01_0088_D03.b : ATCTCCCAGGGAGTCATAACAAAGTGCT*TAAAAATTCTGCTTATGTAAAAAGCTATATT
LVR01_0105_E08.b : ATCTCCCAGGGAGTCATAACAAAGTGCT*TAAAAATTCTGCTTATGTAAAAAGCTACATT
20110601C-013971 : TTGGAGAAAGTAAAAGAACATCAAGCATCCCTGGATGTTAATGACCCTCGGGACTTCAT*
---------+---------+---------+---------+---------+---------+ 982
LVR01_0106_F03.b : TTGGAGAAGGTAAAAAAACATCcaggcatccctggaatgttaatggaccctcgggacttt
LVRM1_0150_G02.b :
LVR01_0036_A01.b : TTGGAaaaaagtaaaagaacaatcaagcatccctgggatgtaaatgaccctccgggactt
LVR01_0015_H05.b : TTGGAGAAAGTAAAAGAACATCAAGCATCCCTGGATGTTAATGACCCTCcgggacttctt
LVR01_0025_A05.b : TTGGAGAAAGTAAAAAAACATCAAGCATCCCTGGATGTTAATGACCCTCGGGACTTCAT*
LVR01_0088_D03.b : TTGGAGAAAGTAAAAGAACATCAAGCATCCCTGGGTGTAAATGACCCTCgggactccatt
LVR01_0105_E08.b : TTGGAGAAAGTAAAAGAACATCAAGCATCCCTGGATGTTAAGGACCCTCGGGACTTCCTT
20110601C-013971 : TGATTGTTTTCTGATCCAAATGGAACAGGAAAAACACAATCACCAAGGTGGGCATTTTAC
---------+---------+---------+---------+---------+---------+ 1042
LVR01_0106_F03.b : cattggattggtttcctgaatcaaaatggaaacagggaaaaaaccaaatcccccaggtgg
LVRM1_0150_G02.b :
LVR01_0036_A01.b : ccttggattggtttcctgaatcaagaagggaacagggaaaaaaccccaatcaccagggtg
LVR01_0015_H05.b : tgattgtttccttgatcaagatggaacagggaaaaacacaaatcccccaggtggcatttt
LVR01_0025_A05.b : TGATTGTTTCCTGATCAAGATGGAACAGGGAAAACACAATCACCAAGGTGGGCATTTTAC
LVR01_0088_D03.b : gattgtttcctgatcaagatggaacaggaaaaacacaatccaccaagtggcatttacttt
LVR01_0105_E08.b : TGATTGTTTTCTGATTCAAATGGAACAGGAAAAACACAATCACCAggtgggatttacttt
20110601C-013971 : TTTTTGAAAACTTGATAACCACTATAACTGAACTTGTTTT....................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b : gcattttacctttttaaaaaatttgaaaacccccttaaaaactggaatttggttggggag
LVRM1_0150_G02.b :
LVR01_0036_A01.b : gccattttactttttaaaaaacttgaaaagcccccttaaaactggaatttgtttgggaag
LVR01_0015_H05.b : actttttaaaaacttggaaagcccactaataacttaactttgttttgggagcctgggaac
LVR01_0025_A05.b : TTTTTGAAAACTTGATAACCACTATAACTGAACTTGTTTTggagcctgggaacaaagacc
LVR01_0088_D03.b : ttgaaaacttgatagccactataactgactttgtttggaagctgggaccaaaacaaacaa
LVR01_0105_E08.b : tgaaaacttgatacccactatatctgaattgttttggaccttgggacaaaaaacacaaac
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b : actggggaaaaagaaaaacaaaaaagggtacccccccccctggaaaaaaaatggggggcc
LVRM1_0150_G02.b :
LVR01_0036_A01.b : ccggggaaaaaaaaacaaaaaaggtaccccccccccggaaaaaatgggggcctccccccc
LVR01_0015_H05.b : aaaaaacaaaaaaatttcccacccccttaaaaaattggggcctccctccctggcctgcct
LVR01_0025_A05.b : aacaagtaccccccttgaaaatttggggcctcctccctgcctgctgaagcccccccaaat
LVR01_0088_D03.b : gtaccccccctgaaaaaatgggctccccccctgctgctgaaaccaccccaaatgtccaca
LVR01_0105_E08.b : ccccaccctcagatttgggcctccccctggcgcctgaaaccccccaaaatttccaaaccc
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b : tccccccccccggggggtggtccggaaaaaaaaccacccccccccaaaaaaagttgtttc
LVRM1_0150_G02.b :
LVR01_0036_A01.b : ccgggctggcctaaaaaaccccccccaaaaattgtcccaaaacccccaaaaaggggcgca
LVR01_0015_H05.b : taaaacccaacccaaaaatgttcccaaaccccaaaaagttgtacaaaaaaaaaaaaaatt
LVR01_0025_A05.b : gtcccaaccccaaaagtgcaaaaaaaaaaatttgacttccctggaatttaaaaaaacccc
LVR01_0088_D03.b : gcccaaagtggaaaaaaagaaaatttgacctccctgggaattgaaaaaaaacccccaaaa
LVR01_0105_E08.b : aaaggtggcaaaaaaaaaattgacttcttgtgaattaaaaaaaaaccccaaaaattccct
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b : ccc
LVRM1_0150_G02.b :
LVR01_0036_A01.b : aaaaaaagaaaaaactgtttagacctcctccccggggaatattttgaaaaaaaaaaaaaa
LVR01_0015_H05.b : ttgaacctccccctggaaaattataaaaaaaaaacaacccacaaaaaaattccctttttt
LVR01_0025_A05.b : ccaaaatcccttttccaatgccaaggaacaaaaaaccccgccctttgccccctataaaaa
LVR01_0088_D03.b : atcccttttgcattggccgagaaaaaaaaaacccccccttgcccccttaaaaaaaaaaat
LVR01_0105_E08.b : ttgcattggccggaaacaaaaacccccccatgccccctaaccccaaaaaattccccgggg
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b :
LVRM1_0150_G02.b :
LVR01_0036_A01.b : ccccccccc
LVR01_0015_H05.b : tttcccttgttgccaagggggaaaaaacaaaaaaaaaaaaaaccccccctccga
LVR01_0025_A05.b : aaaagtcccgcgggggggtgccttgaaaaaaatccccaaaaaaaaaaaaacattttttaa
LVR01_0088_D03.b : ggccccgggggggggtcattgaaaaaaattcccccaaaaaaaaaaaaaaatttttttgcc
LVR01_0105_E08.b : gggggccctttgaaaaaatcccaaaaaaaaaataaactttttaacaccccttggggctcc
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b :
LVRM1_0150_G02.b :
LVR01_0036_A01.b :
LVR01_0015_H05.b :
LVR01_0025_A05.b : aacctttgtaattctccccccaccttctcaccgcccggggggccccctctcccccccccc
LVR01_0088_D03.b : cctccttgaatatcccccccccccccttccccaccgcggggggcgtccccccccttc
LVR01_0105_E08.b : ccccccactctcctcaccgcgtggggggcccccctccctcccccgccccc
20110601C-013971 : ............................................................
---------+---------+---------+---------+---------+---------+ 1082
LVR01_0106_F03.b :
LVRM1_0150_G02.b :
LVR01_0036_A01.b :
LVR01_0015_H05.b :
LVR01_0025_A05.b : ccacccggaggtgtggaccacccaccan
LVR01_0088_D03.b :
LVR01_0105_E08.b :