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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014080

Length: 1,656

Sequence [FASTA format sequence]
TCACACAAGT ATCAGCTTTT GCTCCGACAA GATTGTGGGG ATGCGTGTCG GCTTTTTCTC
CGGATGAGAC CTCGAAAGAC TGTCCGGGGC AGGCAGGGTG TCGTCCCTCC CGCAGCAAGG
CCAGGCCGAC GACCGGGTAA GAAGCCTCTT CCTACCAGGA GGTCTCGGCC GAAGCCACCA
CCCGTAGACG ATGCTGAGGT TGATGAGCTG GTGCTTCAGA CCAAGCGGAG CTCCCGGAGG
CAGAGCCTGG AGCTGCAGAA GTGCGAGGAG ATCCTCCACA AGCTCGTGAA GTACCGCTTC
AGCTGGCCCT TCAGGGAGCC CGTGACCAGA GACGAGGCCG AGGACTACTA CGACGTGATC
GCCCACCCCA TGGACTTCCA GACGATGCAG AACAAGTGTT CCTGTGGGAG CTACCGCTCT
GTGCAGGAGT TTCTCGCCGA CATGAAACAA GTGTTTACCA ACGCCGAGCT TTACAACTGC
CGCGGCAGCC ACGTGCTGAA CTGCACGGTG AAGACAGAAC AGTGTCTGGT GGCTCTGTTG
CATAAACACC TTCCTGGCCA CCCGTACGTC CGTAGGAAAC GCAAGAAGTT TCCCGATCGG
CTTGCCGAAG ATGAAGGGGA CAGTGAGCCA GAGCCCGTTG GGCAGTCCAG GGGACGAAGA
CAGAAGAAAT AGAGAGGCAG GGCCCTGGTG ACGGTATCAG TGAGTGCCAT ACCGAATTCT
GTATTCACCA GCAGCACGAG AGAGGTGTGG TCTGTTGAGT TGATCTTGGC AGAGTAAAGG
GACATGTCCC GCAGCCATTC CCGAATACCC CTCCCCTCCT TCGTGACGGC TCTCTCCCCA
CTCCCGCCCC GCCTCACCCC GGCAAAGAAA AAACCTAAGG CACTTCACTC AGAGACTGGA
GCCCTGCTTG TAACCAGGCA TAGAACCTTG ACTTTGATGG GTCTGGCAGA AGGGTGTTGG
AGCCCAGCCC ACCCACATAC CAGACAAGCT CTTAGGGGAG CAGAAGAAAA GCAGGAAGAA
TTTAAATGTT TAATTTTTTT TAAATTGACT TTTCTAGTTA TTAAAAGTTG CTTGTTTCAG
CAGTGATCTT GTATAAAGAA CATCTTGTAA AAACATTTCT GTCGTCTTGC TTTGGCACAT
GTACAGTACA ATTTATATGA TAAGGTGTTT GCTTTACTTT TGCCCGTTTC CTCCCTCAGC
CCATGCTCCC CGTTAGAGAA GCTGGGCTGG GGCCATCGGG GCAAGCAGTG GGGACCTGGT
CGGGACAGCC CTCTGCCTGC CCTGGTGGCT GTTGCTGCCG CCTTCACCTG CAGCCGCCCC
TGCCATGTGG TTCAGGCTTC AGACTCAGGA CTCCCTGAGA ACCCGAGTCC CTCCGTGCCC
AGTGTCAGGG TGGGGGATGG AGGGGCTCAG CGGCCCCTTC CTGCAGTGAG TCTAGCGCTA
GTAGTTATGT TGAGGCCAGA CTTTGTAGTC TTCTTTCCGT CTTAAGGGCA GATTTTGATA
AAAATGCAAA ACAGGGTTTA ATTTTCTTTT CTATCAACTT TGAATTTGGA AATTTGGAGC
ACCTAAGCTC TTCTGTACCT ATTTAAATGA AGGGAAAAGA ACTTCACCGA GGGGGACTGC
CGCTCACAGA ACCTGAGAAT AAAGCCTCTG AAAGTG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinBAZ1Btyrosine-protein kinase BAZ1B [Homo sapiens]. 3325e-91
Contig/Assembly ProteinCECR2cat eye syndrome chromosome region, candidate 2 [Homo sapiens]. 74.33e-13
Contig/Assembly ProteinBPTFnucleosome-remodeling factor subunit BPTF isoform 1 [Homo sapiens]. 70.54e-12
Contig/Assembly ProteinBPTFnucleosome-remodeling factor subunit BPTF isoform 2 [Homo sapiens]. 70.54e-12
Contig/Assembly ProteinKAT2Bhistone acetyltransferase KAT2B [Homo sapiens]. 68.91e-11
Contig/Assembly ProteinBRD3bromodomain-containing protein 3 [Homo sapiens]. 68.22e-11
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 isoform 1 [Homo sapiens]. 68.22e-11
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 isoform 1 [Homo sapiens]. 68.22e-11
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 isoform 3 [Homo sapiens]. 68.22e-11
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 isoform 2 [Homo sapiens]. 68.22e-11


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinBaz1btyrosine-protein kinase BAZ1B [Mus musculus]. 2988e-81
Contig/Assembly ProteinCecr2cat eye syndrome chromosome region, candidate 2 homolog [Mus musculus]. 73.64e-13
Contig/Assembly ProteinBptfbromodomain PHD finger transcription factor [Mus musculus]. 71.62e-12
Contig/Assembly ProteinLOC100504388PREDICTED: histone acetyltransferase KAT2B-like [Mus musculus]. 70.15e-12
Contig/Assembly ProteinLOC100504388PREDICTED: histone acetyltransferase KAT2B-like [Mus musculus]. 70.15e-12
Contig/Assembly ProteinBrd3bromodomain-containing protein 3 isoform 1 [Mus musculus]. 69.38e-12
Contig/Assembly ProteinBrd3bromodomain-containing protein 3 isoform 2 [Mus musculus]. 69.38e-12
Contig/Assembly ProteinBrd3bromodomain-containing protein 3 isoform 2 [Mus musculus]. 69.38e-12
Contig/Assembly ProteinBrd2bromodomain-containing protein 2 [Mus musculus]. 68.22e-11
Contig/Assembly ProteinBrd2bromodomain-containing protein 2 [Mus musculus]. 68.22e-11


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC479719PREDICTED: similar to bromodomain adjacent to zinc finger domain, 1B [Canis familiaris]. 3242e-88
Contig/Assembly ProteinLOC477738PREDICTED: similar to Cat eye syndrome critical region protein 2 [Canis familiaris]. 73.94e-13
Contig/Assembly ProteinLOC480467PREDICTED: similar to fetal Alzheimer antigen isoform 2 [Canis familiaris]. 70.55e-12
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 12 [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 11 [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 8 [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC477052PREDICTED: similar to p300/CBP-associated factor [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 10 [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 1 [Canis familiaris]. 68.91e-11
Contig/Assembly ProteinLOC480682PREDICTED: similar to bromodomain containing 3 isoform 9 [Canis familiaris]. 68.91e-11


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinBAZ1BPREDICTED: bromodomain adjacent to zinc finger domain, 1B [Bos taurus]. 3363e-92
Contig/Assembly ProteinBAZ1Btyrosine-protein kinase BAZ1B [Bos taurus]. 3363e-92
Contig/Assembly ProteinLOC517202PREDICTED: cat eye syndrome chromosome region, candidate 2 homolog [Bos taurus]. 76.66e-14
Contig/Assembly ProteinBPTFPREDICTED: bromodomain PHD finger transcription factor isoform 1 [Bos taurus]. 70.54e-12
Contig/Assembly ProteinBPTFPREDICTED: Nucleosome-remodeling factor subunit BPTF-like [Bos taurus]. 70.54e-12
Contig/Assembly ProteinBRD3bromodomain-containing protein 3 [Bos taurus]. 70.16e-12
Contig/Assembly ProteinKAT2BPREDICTED: K(lysine) acetyltransferase 2B [Bos taurus]. 69.39e-12
Contig/Assembly ProteinKAT2BPREDICTED: K(lysine) acetyltransferase 2B [Bos taurus]. 69.39e-12
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 [Bos taurus]. 68.22e-11
Contig/Assembly ProteinBRD4PREDICTED: bromodomain containing 4 [Bos taurus]. 65.91e-10


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinBAZ1BPREDICTED: tyrosine-protein kinase BAZ1B [Sus scrofa]. 3571e-98
Contig/Assembly ProteinLOC100516311PREDICTED: bromodomain-containing protein 3-like [Sus scrofa]. 70.53e-12
Contig/Assembly ProteinKAT2BPREDICTED: histone acetyltransferase KAT2B [Sus scrofa]. 68.98e-12
Contig/Assembly ProteinBRD2bromodomain-containing protein 2 [Sus scrofa]. 68.21e-11
Contig/Assembly ProteinBRD4bromodomain-containing protein 4 [Sus scrofa]. 65.97e-11
Contig/Assembly ProteinLOC100625956PREDICTED: bromodomain-containing protein 4-like [Sus scrofa]. 65.97e-11
Contig/Assembly ProteinBAZ2APREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 2A [Sus scrofa]. 63.92e-10
Contig/Assembly ProteinPHIPPREDICTED: PH-interacting protein, partial [Sus scrofa]. 62.86e-10
Contig/Assembly ProteinKAT2APREDICTED: histone acetyltransferase KAT2A isoform 1 [Sus scrofa]. 61.61e-09
Contig/Assembly ProteinBAZ1APREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger domain protein 1A [Sus scrofa]. 59.36e-09


Assembly Members: 9      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010065D09ADR01_0065_D09.bDB787287 
LVR010084A04LVR01_0084_A04.bCJ000092 
LVRM10111C12LVRM1_0111_C12.bBP450496 
OVR010074E03OVR01_0074_E03.bBW966207 
OVRM10129B10OVRM1_0129_B10.bBP147184 AK235960
OVRM10208H12OVRM1_0208_H12.bBP462285 
THY010062A10THY01_0062_A10.bBP160322 
THY010095H01THY01_0095_H01.bBP168169 
THY010109G07THY01_0109_G07.bBP167547 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
321C020.500BSCCC/P
T200.500CCT/P


Alignment:      TOP

20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0129_B10.b : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0062_A10.b : cattttggtggxxxxxxxxxxxx
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : .TCACACAAGTATCAGCTTTTGCTCCGACAAGATTGTGGGGATGCGTGTCGGCTTTTTCT
---------+---------+---------+---------+---------+---------+ 59
OVRM1_0129_B10.b : xTCACACAAGTATCAGCTTTTGCTCCGACAAGATTGTGGGGATGCGTGTCGGCTTTTTCT
THY01_0062_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : CCGGATGAGACCTCGAAAGACTGTCCGGGGCAGGCAGGGTGTCGTCCCTCCCGCAGCAAG
---------+---------+---------+---------+---------+---------+ 119
OVRM1_0129_B10.b : CCGGATGAGACCTCGAAAGACTGTCCGGGGCAGGCAGGGTGTCGTCCCTCCCGCAGCAAG
THY01_0062_A10.b : xcgatTGAGACCTCGAAAGACTGTCCGGGGCAGGCAGGGTGTCGTCCCTCCCGCAGCAAG
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : GCCAGGCCGACGACCGGGTAAGAAGCCTCTTCCTACCAGGAGGTCTCGGCCGAAGCCACC
---------+---------+---------+---------+---------+---------+ 179
OVRM1_0129_B10.b : GCCAGGCCGACGACCGGGTAAGAAGCCTCTTCCTACCAGGAGGTCTCGGCCGAAGCCACC
THY01_0062_A10.b : GCCAGGCCGACGACCGGGTAAGAAGCCTCTTCCTACCAGGAGGTCTCGGCCGAAGCCACC
THY01_0109_G07.b : gttgtcaaa
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : ACCCGTAGACGATGCTGAGGTTGATGAGCTGGTGCTTCAGACCAAGCGGAGCTCCCGGAG
---------+---------+---------+---------+---------+---------+ 239
OVRM1_0129_B10.b : ACCCGTAGACGATGCTGAGGTTGATGAGCTGGTGCTTCAGACCAAGCGGAGCTCCCGGAG
THY01_0062_A10.b : ACCCGTAGACGATGCTGAGGTTGATGAGCTGGTGCTTCAGACCAAGCGGAGCTCCCGGAG
THY01_0109_G07.b : cagcggtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcAGCGGAGCTCCCGGAG
OVRM1_0208_H12.b : gcagtgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : GCAGAGCCTGGAGCTGCAGAAGTGCGAGGAGATCCTCCACAAGCTCGTGAAGTACCGCTT
---------+---------+---------+---------+---------+---------+ 299
OVRM1_0129_B10.b : GCAGAGCCTGGAGCTGCAGAAGTGCGAGGAGATCCTCCACAAGCTCGTGAAGTACCGCTT
THY01_0062_A10.b : GCAGAGCCTGGAGCTGCAGAAGTGCGAGGAGATCCTCCACAAGCTCGTGAAGTACCGCTT
THY01_0109_G07.b : GCAGAGCCTGGAGCTGCAGAAGTGCGAGGAGATCCTCCACAAGCTCGTGAAGTACCGCTT
OVRM1_0208_H12.b : xxxxxGCCTGGAGCTGCAGAAGTGCGAGGAGATCCTCCACAAGCTCGTGAAGTACCGCTT
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : CAGCTGGCCCTTCAGGGAGCCCGTGACCAGAGACGAGGCCGAGGACTACTACGACGTGAT
---------+---------+---------+---------+---------+---------+ 359
OVRM1_0129_B10.b : CAGCTGGCCCTTCAGGGAGCCCGTGACCAGAGACGAGGCCGAGGACTACTACGACGTGAT
THY01_0062_A10.b : CAGCTGGCCCTTCAGGGAGCCTGTGACCAGAGACGAGGCCGAGGACTACTACGACGTGAT
THY01_0109_G07.b : CAGCTGGCCCTTCAGGGAGCCTGTGACCAGAGACGAGGCCGAGGACTACTACGACGTGAT
OVRM1_0208_H12.b : CAGCTGGCCCTTCAGGGAGCCCGTGACCAGAGACGAGGCCGAGGACTACTACGACGTGAT
LVR01_0084_A04.b : gxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : CGCCCACCCCATGGACTTCCAGACGATGCAGAACAAGTGTTCCTGTGGGAGCTACCGCTC
---------+---------+---------+---------+---------+---------+ 419
OVRM1_0129_B10.b : CGCCCACCCCATGGACTTCCAGACGATGCAGAACAAGTGTTCCTGTGGGAGCTACCGCTC
THY01_0062_A10.b : CGCCCACCCCATGGACTTCCAGACGATGCAGAACAAGTGTTCCTGTGGGAGCTACCGCTC
THY01_0109_G07.b : CGCCCACCCCATGGACTTCCAGACGATGCAGAACAAGTGTTCCTGTGGGAGCTACCGCTC
OVRM1_0208_H12.b : CGCCCACCCCATGGACTTCCAGACGATGCAGAACAAGTGTTCCTGTGGGAGCTACCGCTC
LVR01_0084_A04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGTTCCTGTGGGAGCTACCGCTC
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
---------+---------+---------+---------+---------+---------+ 479
OVRM1_0129_B10.b : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
THY01_0062_A10.b : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
THY01_0109_G07.b : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
OVRM1_0208_H12.b : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
LVR01_0084_A04.b : TGTGCAGGAGTTTCTCGCCGACATGAAACAAGTGTTTACCAACGCCGAGCTTTACAACTG
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTCTGGTGGCTCTGTT
---------+---------+---------+---------+---------+---------+ 539
OVRM1_0129_B10.b : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTCTGGTGGCTCTGTT
THY01_0062_A10.b : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTCTGGTGGCTCTGTT
THY01_0109_G07.b : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTTTGGTGGCTTTGTT
OVRM1_0208_H12.b : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTCTGGTGGCTCTGTT
LVR01_0084_A04.b : CCGCGGCAGCCACGTGCTGAACTGCACGGTGAAGACAGAACAGTGTCTGGTGGCTCTGTT
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b :
20110601C-014080 : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
---------+---------+---------+---------+---------+---------+ 599
OVRM1_0129_B10.b : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
THY01_0062_A10.b : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
THY01_0109_G07.b : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
OVRM1_0208_H12.b : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
LVR01_0084_A04.b : GCATAAACACCTTCCTGGCCACCCGTACGTCCGTAGGAAACGCAAGAAGTTTCCCGATCG
LVRM1_0111_C12.b :
OVR01_0074_E03.b : tagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0095_H01.b : gggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0065_D09.b :
20110601C-014080 : GCTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCCGTTGGGCAGTCCA*GGGGACGAA
---------+---------+---------+---------+---------+---------+ 658
OVRM1_0129_B10.b : GCTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCTGTTGGGCAGTCCA*GGGGACGAA
THY01_0062_A10.b : GCTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCCGTTGGGCAGTCCA*GGGGACGAA
THY01_0109_G07.b : GGTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCCGTTGGGCAGTCCA*GGGGACGAA
OVRM1_0208_H12.b : GCTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCTGTTGGGCAGTCCATGGGGACGAA
LVR01_0084_A04.b : GCTTGCCGAAGATGAAGGGGACAGTGAGCCAGAGCCCGTTGGGCAGTCCA*GGGGACGAA
LVRM1_0111_C12.b : nagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0074_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxtatttatacgcagtcttgtttctttaagccc
THY01_0095_H01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtttctttaagccc
ADR01_0065_D09.b :
20110601C-014080 : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
---------+---------+---------+---------+---------+---------+ 718
OVRM1_0129_B10.b : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
THY01_0062_A10.b : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
THY01_0109_G07.b : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
OVRM1_0208_H12.b : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
LVR01_0084_A04.b : GACAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
LVRM1_0111_C12.b : xxxAGAAGAAATAGAGAGGCAGGGCCCTGGTGACGGTATCAGTGAGTGCCATACCGAATT
OVR01_0074_E03.b : gtgctctgtctctccccgctctccctcaGGTGACGGTATCAGTGAGTGCCATACCGAATT
THY01_0095_H01.b : gtgctctgtctctccccgctctccctcaGGTGACGGTATCAGTGAGTGCCATACCGAATT
ADR01_0065_D09.b : nn
20110601C-014080 : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
---------+---------+---------+---------+---------+---------+ 778
OVRM1_0129_B10.b : CTGTATTCACCAGCAGCACGAGAGAAGTGTGGTCTGTTGAGTTGATCTTG
THY01_0062_A10.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
THY01_0109_G07.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGNTTGTTGAGTTGATCTTGGCAGAGTAAG
OVRM1_0208_H12.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
LVR01_0084_A04.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
LVRM1_0111_C12.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
OVR01_0074_E03.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
THY01_0095_H01.b : CTGTATTCACCAGCAGCACGAGAGAGGTGTGGTCTGTTGAGTTGATCTTGGCAGAGTAAA
ADR01_0065_D09.b : nnnggatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTAAA
20110601C-014080 : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
---------+---------+---------+---------+---------+---------+ 838
OVRM1_0129_B10.b :
THY01_0062_A10.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
THY01_0109_G07.b : GGGAatgttcccaagcctttcccaatccctcccctcttgggaagggtcttcccctccgcc
OVRM1_0208_H12.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
LVR01_0084_A04.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
LVRM1_0111_C12.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
OVR01_0074_E03.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
THY01_0095_H01.b : GAGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
ADR01_0065_D09.b : GGGACATGTCCCGCAGCCATTCCCGAATACCCCTCCCCTCCTTCGTGACGGCTCTCTCCC
20110601C-014080 : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
---------+---------+---------+---------+---------+---------+ 898
OVRM1_0129_B10.b :
THY01_0062_A10.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
THY01_0109_G07.b : gcgcttacccggaaga
OVRM1_0208_H12.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
LVR01_0084_A04.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
LVRM1_0111_C12.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
OVR01_0074_E03.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
THY01_0095_H01.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
ADR01_0065_D09.b : CACTCCCGCCCCGCCTCACCCCGGCAAAGAAAAAACCTAAGGCACTTCACTCAGAGACTG
20110601C-014080 : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
---------+---------+---------+---------+---------+---------+ 958
OVRM1_0129_B10.b :
THY01_0062_A10.b : GAGCCCTGCTTGTAGCCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
THY01_0109_G07.b :
OVRM1_0208_H12.b : GAGCCCTGCTTGTNACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAAGGTGTT
LVR01_0084_A04.b : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
LVRM1_0111_C12.b : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
OVR01_0074_E03.b : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
THY01_0095_H01.b : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
ADR01_0065_D09.b : GAGCCCTGCTTGTAACCAGGCATAGAACCTTGACTTTGATGGGTCTGGCAGAAGGGTGTT
20110601C-014080 : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
---------+---------+---------+---------+---------+---------+ 1018
OVRM1_0129_B10.b :
THY01_0062_A10.b : GGAGCCCAGCCCACCCACCTACCAAACAAGCTCTTAGGGGAGCAGAAAAAAAGCAGGAAG
THY01_0109_G07.b :
OVRM1_0208_H12.b : GGGAGCCAGCCCNACCACATACCAGACAAGCTCTTANGGGAGCAGAAGAAAAGCAGGAAG
LVR01_0084_A04.b : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
LVRM1_0111_C12.b : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
OVR01_0074_E03.b : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
THY01_0095_H01.b : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
ADR01_0065_D09.b : GGAGCCCAGCCCACCCACATACCAGACAAGCTCTTAGGGGAGCAGAAGAAAAGCAGGAAG
20110601C-014080 : AATTTAAATGTTTAATTTTTTTTAAATTGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
---------+---------+---------+---------+---------+---------+ 1078
OVRM1_0129_B10.b :
THY01_0062_A10.b : aatttaaatgtttattttttttttaattGACTTTTtt
THY01_0109_G07.b :
OVRM1_0208_H12.b : CATTTTAATG
LVR01_0084_A04.b : aatttaaatgtttaattttttttaaattGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
LVRM1_0111_C12.b : aatttaaatgtttaattttttttaaattGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
OVR01_0074_E03.b : aatttaaatgtttaattttttttaaattGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
THY01_0095_H01.b : aatttaaatgtttaattttttttaaattGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
ADR01_0065_D09.b : aatttaaatgtttaattttttttaaattGACTTTTCTAGTTATTAAAAGTTGCTTGTTTC
20110601C-014080 : AGCAGTGATCTTGTATAAAGAACATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
---------+---------+---------+---------+---------+---------+ 1138
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : AGCAGTGATCTTGTATAAAGAGCATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
LVRM1_0111_C12.b : AGCAGTGATCTTGTATAAAGAACATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
OVR01_0074_E03.b : AGCAGTGATCTTGTATAAAGAACATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
THY01_0095_H01.b : AGCAGTGATCTTGTATAAAGAACATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
ADR01_0065_D09.b : AGCAGTGATCTTGTATAAAGAACATCTTGTAAAAACATTTCTGTCGTCTTGCTTTGGCAC
20110601C-014080 : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCGTTTCCTCCCTCA
---------+---------+---------+---------+---------+---------+ 1198
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCGTTTCCTCTCTCA
LVRM1_0111_C12.b : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCGTTTCCTCCCTCA
OVR01_0074_E03.b : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCGTTTCCTCCCTCA
THY01_0095_H01.b : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCATTTCCTCCCTCA
ADR01_0065_D09.b : ATGTACAGTACAATTTATATGATAAGGTGTTTGCTTTACTTTTGCCCGTTTCCTCCCTCA
20110601C-014080 : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGG*CCATCGGGGCAAGCAGTGGGGACCT
---------+---------+---------+---------+---------+---------+ 1257
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGGGCCATCGGGGCAAGCAATGGGGACCT
LVRM1_0111_C12.b : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGG*CCATCGGGGCAAGCAGTGGGGACCT
OVR01_0074_E03.b : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGG*CCATCGGGGCAAGCAGTGGGGACCT
THY01_0095_H01.b : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGG*CCATCGGGGCAAGCAGTGGGGACCT
ADR01_0065_D09.b : GCCCATGCTCCCCGTTAGAGAAGCTGGGCTGGGG*CCATCGGGGCAAGCAGTGGGGACCT
20110601C-014080 : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACCTGCAGCCGC
---------+---------+---------+---------+---------+---------+ 1317
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACTGCAAGCGCC
LVRM1_0111_C12.b : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACCTGCAGCCGC
OVR01_0074_E03.b : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACCTGCAGCCGC
THY01_0095_H01.b : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACCTGCAGCCGC
ADR01_0065_D09.b : GGTCGGGACAGCCCTCTGCCTGCCCTGGTGGCTGTTGCTGCCGCCTTCACCTGCAGCCGC
20110601C-014080 : CCCTGCCATGTGGTTCAGGCTTCAGACTCAGGACTCCCTGAGAACCCGAGTCCCTCCGTG
---------+---------+---------+---------+---------+---------+ 1377
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : CCCTGCCATGTGGTTCAGGCTTtcaaattccggaactccctgaaaaaccccaatcccctc
LVRM1_0111_C12.b : CCCTGCCATGTGGTTCAGGCTTCAGACTCGGGACTCCCTGAGAACCCGAGT*CCTCCGTG
OVR01_0074_E03.b : CCCTG
THY01_0095_H01.b : CCCTGCCATGTGGTTCAGGCTTCAGACTCAGGACTCCCTGAGAACCCGAGTCCCTCCGTG
ADR01_0065_D09.b : CCCTGCCATGTGGTTCAGGCTTCAGACTCGGGACTCCCTGAGAACCCGAGTCCCTCCGTG
20110601C-014080 : CCCAGTGTCAGGGTGGGGGATGGAGGGGCTCAGCGGCCCCTTCCTGCAGTGAGTCTAGCG
---------+---------+---------+---------+---------+---------+ 1437
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : cgtgccccaggtccgggtggggggggacggaaaggggcccccccggcccccctttccggg
LVRM1_0111_C12.b : CCAAGTGTCAGGtggggggaatggaatnnnntnnnnnnttnnnttntnttgattgttttt
OVR01_0074_E03.b :
THY01_0095_H01.b : CCCAGTGTCAGGGTGGGGGATGGAGGGGCTCAGCGGCCCCTTCCTGCAGTGAGTCTAGCG
ADR01_0065_D09.b : CCCAGTGTCAGGGTGGGGGACGGAGGGGCTCAGCGGCCCCTTCCTGCAGTGAGTCTAGCG
20110601C-014080 : CTAGTAGTTATGTTGAGGCCAGACTTTGTAGTCTTCTTTCCGTCTTAAGGGCAGATTTTG
---------+---------+---------+---------+---------+---------+ 1497
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : caggggggtctaaccccctgggtaattttatattttgaagggccaaagaactttttgtaa
LVRM1_0111_C12.b : ttt
OVR01_0074_E03.b :
THY01_0095_H01.b : CTAGTAGTTATGTTGAGGCCAGACTTTGTAATCTTCTTTCCCTCTTAAGGGCAAATTTTG
ADR01_0065_D09.b : CTAGTAGTTATGTTGAGGCCAGACTTTGTAGTCTTCTTTCCGTCTTAAGGGCAGATTTTG
20110601C-014080 : ATAAAAATGCAAAACAGGGTTTAATTTT*CTTTTCTATCAACTTTGAATTTGGAAATTTG
---------+---------+---------+---------+---------+---------+ 1556
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : ttctttctttttttcctccttctttaaagggggaccaaaaattttttttgtaaaaaaaaa
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b : ATAAAAATGCAAAACAGGGGTTAATTTTTCTTTTCTATCAATTTTGAATTTGGAAATTTG
ADR01_0065_D09.b : ATAAAAATGCAAAACAGGGTTTAATTTT*CTTTTCTATCAACTTTGAATTTGGAAATTTG
20110601C-014080 : GAGCACCTAAGCTCTTCTGTACCTATTTAAATGAAGGGAAAAGAACTTCACCGAGGGGGA
---------+---------+---------+---------+---------+---------+ 1616
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b : aaaaaaatgggcacccaaaaaaaacaac
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b : GAACACCTAAACTCTTCTGTACCTATTAAATTGAAGGGAAAAaactttccccaaggaaaa
ADR01_0065_D09.b : GAGCACCTAAGCTCTTCTGTACCTATTTAAATGAAGGGAAAAGAACTTCACCGAGGGGGA
20110601C-014080 : CTGCCGCTCACAGAACCTGAGAATAAAGCCTCTGAAAGTG....................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b : gggccgctcccaaaacctggaaaaaaaagccttctgaaa
ADR01_0065_D09.b : CTGCCGCTCACAGAACCTGAGAATAAAGCCTCTGAAAGTGaccntncaatgtgtggtcgc
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : tgtctccggcctcccntggcattgctccaggggctgctgggcaggtctgctgtcctgggc
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : ctggagtgangtagcactgacgtatggttttccaaccccagtcgccaaccccttcctggc
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : tcctaacccaaaggcagtctggtcctgtaacagtgagaattctgggtcccacctcgggac
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : cctgaagtggttgtggtttttaaaatgtcttaagggaggagggccccctaaaggggaaac
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : tggaaaaaatggaatttcaaaaaacttatggcctgggtttttaaaaaaaaaaaaaaggcc
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : cttgtctccactggggcccggccccctaaaatcccgaggggccagcttacgacccccttt
20110601C-014080 : ............................................................
---------+---------+---------+---------+---------+---------+ 1656
OVRM1_0129_B10.b :
THY01_0062_A10.b :
THY01_0109_G07.b :
OVRM1_0208_H12.b :
LVR01_0084_A04.b :
LVRM1_0111_C12.b :
OVR01_0074_E03.b :
THY01_0095_H01.b :
ADR01_0065_D09.b : tggaaaggggcccaagaggcattaaaacggccgggcccctttacccggggagaaggttt