Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-014086

Sequence: [FASTA format sequence] AGAGGAGATA AATATTAGAG AAACAAAAGT CCAGAATGCG AAGGCTGCCA TTCTCACTTC CTCTTACCCC TTAACCCAGT GCTGCTTTGA ATAGAGTCAG TGCCCCCGGG CAGTGTGCTG AGGAGAGAAG ACGGCAGTGC CTCGGAGGCT GCTCTGACCA GCAGATACAG AGGGTCATGC TTTCTCCGGG TCACTTCTGT TCACGGAAAA TGCCAGGATG ATTCCTCGCA TCCGCCTGGC TGTGGCCACG ATCCCAGCCA TGGCCTTTCT CTCCTGCCTG AGATCTGAGA GCTGGGACCC TTGCGTGCAG GTGGTTCCTA ACATTAGTTA CCAATGCATG GAGCTGAATT TCTACAAAAT CCCTGACAAC ATCCCCACAT CAGTCAAGAT ACTGGACCTG AGCTTTAACT ACCTGAGTCA TTTAGACAGC AATAGCTTCT CCAGCTTTCC AGAACTGCAG GTGCTGGATT TATCCAGCCA GGACGAAGAC TGGGTGAGGA ATGAACTGGT AAAGAACTTG GAGGAGGGGG TGCCCCCTTT TCATCTCTGC CTTCACTACA GAGACTTCAT TCCCGGTGTG GCCATCGCTG CTAACATCAT CCAGGAAGGT TTCCACAAAA GTCGGAAGGT TATTGTCGTG GTGTCCCAGC ACTTCATACA GAGCCGATGG TGTATCTTTG AGTATGAGAT TGCCCAGACC TGGCAGTTTC TGAGGAGTCA TGCCGGCATC ATCTTCATCG TCCTGCAGAA GTTGGAGAAG TCCCTGCTGC GGCAGCAGGT GGAGCTGTAT CGCCTTCTCA GCAGGAATAC CTACCTGGAG TGGGAAGACA GCGTCCTGGG GCGGCACATC TTCTGGAGAC GACTCAAGAA AGCCTTGCTG GATGGTAAAC CATGGAGTCC AGAAGGAACA GAGGATTCAG AAAGCACCCA GCATGATACC ACAGCCTTCA CTTAAGGAGG GAAAACTNCC CACGTGTCCC TTGGTCAGCT GGATCCCGTG CTTGTTTACC AGTACTAAAT CCTGCA

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
TLR4 toll-like receptor 4 precursor [Homo sapiens]. 286 2e-77

TLR2 toll-like receptor 2 precursor [Homo sapiens]. 100 2e-21

TLR1 toll-like receptor 1 precursor [Homo sapiens]. 90.1 3e-18

TLR6 toll-like receptor 6 precursor [Homo sapiens]. 84.3 2e-16

TLR10 toll-like receptor 10 isoform b [Homo sapiens]. 76.3 4e-14

TLR10 toll-like receptor 10 isoform a precursor [Homo sapiens]. 76.3 4e-14

TLR10 toll-like receptor 10 isoform a precursor [Homo sapiens]. 76.3 4e-14

TLR10 toll-like receptor 10 isoform a precursor [Homo sapiens]. 76.3 4e-14

TLR10 toll-like receptor 10 isoform a precursor [Homo sapiens]. 76.3 4e-14

TLR5 toll-like receptor 5 precursor [Homo sapiens]. 75.9 6e-14

Locus	Definition	Score	E value
TLR4	toll-like receptor 4 precursor [Homo sapiens].	286	2e-77
TLR2	toll-like receptor 2 precursor [Homo sapiens].	100	2e-21
TLR1	toll-like receptor 1 precursor [Homo sapiens].	90.1	3e-18
TLR6	toll-like receptor 6 precursor [Homo sapiens].	84.3	2e-16
TLR10	toll-like receptor 10 isoform b [Homo sapiens].	76.3	4e-14
TLR10	toll-like receptor 10 isoform a precursor [Homo sapiens].	76.3	4e-14
TLR10	toll-like receptor 10 isoform a precursor [Homo sapiens].	76.3	4e-14
TLR10	toll-like receptor 10 isoform a precursor [Homo sapiens].	76.3	4e-14
TLR10	toll-like receptor 10 isoform a precursor [Homo sapiens].	76.3	4e-14
TLR5	toll-like receptor 5 precursor [Homo sapiens].	75.9	6e-14

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Tlr4 toll-like receptor 4 precursor [Mus musculus]. 272 3e-73

Tlr13 toll-like receptor 13 precursor [Mus musculus]. 102 4e-22

Tlr2 toll-like receptor 2 precursor [Mus musculus]. 102 5e-22

Tlr6 toll-like receptor 6 [Mus musculus]. 91.3 1e-18

Tlr1 toll-like receptor 1 precursor [Mus musculus]. 90.1 2e-18

Tlr5 toll-like receptor 5 [Mus musculus]. 68.2 1e-11

Tlr7 toll-like receptor 7 precursor [Mus musculus]. 57 2e-08

Tlr8 toll-like receptor 8 precursor [Mus musculus]. 55.5 7e-08

Tlr12 toll-like receptor 12 precursor [Mus musculus]. 52.4 6e-07

Locus	Definition	Score	E value
Tlr4	toll-like receptor 4 precursor [Mus musculus].	272	3e-73
Tlr13	toll-like receptor 13 precursor [Mus musculus].	102	4e-22
Tlr2	toll-like receptor 2 precursor [Mus musculus].	102	5e-22
Tlr6	toll-like receptor 6 [Mus musculus].	91.3	1e-18
Tlr1	toll-like receptor 1 precursor [Mus musculus].	90.1	2e-18
Tlr5	toll-like receptor 5 [Mus musculus].	68.2	1e-11
Tlr7	toll-like receptor 7 precursor [Mus musculus].	57	2e-08
Tlr8	toll-like receptor 8 precursor [Mus musculus].	55.5	7e-08
Tlr12	toll-like receptor 12 precursor [Mus musculus].	52.4	6e-07

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
TLR4 toll-like receptor 4 [Canis lupus familiaris]. 298 7e-81

TLR2 toll-like receptor 2 precursor [Canis lupus familiaris]. 101 1e-21

TLR1 toll-like receptor 1 [Canis lupus familiaris]. 85.1 1e-16

TLR10 toll-like receptor 10 [Canis lupus familiaris]. 73.9 2e-13

LOC491698 PREDICTED: similar to toll-like receptor 2 [Canis familiaris]. 67.4 2e-11 O

TLR5 toll-like receptor 5 [Canis lupus familiaris]. 66.6 4e-11

TLR7 toll-like receptor 7 [Canis lupus familiaris]. 55.1 1e-07

LOC487234 PREDICTED: similar to CD180 antigen precursor (Lymphocyte antigen 64) (Radioprotective 105 kDa protein) [Canis familiaris]. 51.2 2e-06 O

Locus	Definition	Score	E value	FL
TLR4	toll-like receptor 4 [Canis lupus familiaris].	298	7e-81
TLR2	toll-like receptor 2 precursor [Canis lupus familiaris].	101	1e-21
TLR1	toll-like receptor 1 [Canis lupus familiaris].	85.1	1e-16
TLR10	toll-like receptor 10 [Canis lupus familiaris].	73.9	2e-13
LOC491698	PREDICTED: similar to toll-like receptor 2 [Canis familiaris].	67.4	2e-11	O
TLR5	toll-like receptor 5 [Canis lupus familiaris].	66.6	4e-11
TLR7	toll-like receptor 7 [Canis lupus familiaris].	55.1	1e-07
LOC487234	PREDICTED: similar to CD180 antigen precursor (Lymphocyte antigen 64) (Radioprotective 105 kDa protein) [Canis familiaris].	51.2	2e-06	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
TLR4 toll-like receptor 4 precursor [Bos taurus]. 294 1e-79

TLR2 toll-like receptor 2 precursor [Bos taurus]. 99.4 5e-21

TLR6 toll-like receptor 6 [Bos taurus]. 83.2 3e-16

TLR1 toll-like receptor 1 [Bos taurus]. 83.2 3e-16

TLR5 toll-like receptor 5 [Bos taurus]. 75.5 7e-14

TLR10 toll-like receptor 10 precursor [Bos taurus]. 65.9 6e-11

TLR8 toll-like receptor 8 [Bos taurus]. 57.4 2e-08

TLR7 toll-like receptor 7 [Bos taurus]. 53.9 2e-07

CD180 CD180 antigen [Bos taurus]. 52.4 6e-07 O

Locus	Definition	Score	E value	FL
TLR4	toll-like receptor 4 precursor [Bos taurus].	294	1e-79
TLR2	toll-like receptor 2 precursor [Bos taurus].	99.4	5e-21
TLR6	toll-like receptor 6 [Bos taurus].	83.2	3e-16
TLR1	toll-like receptor 1 [Bos taurus].	83.2	3e-16
TLR5	toll-like receptor 5 [Bos taurus].	75.5	7e-14
TLR10	toll-like receptor 10 precursor [Bos taurus].	65.9	6e-11
TLR8	toll-like receptor 8 [Bos taurus].	57.4	2e-08
TLR7	toll-like receptor 7 [Bos taurus].	53.9	2e-07
CD180	CD180 antigen [Bos taurus].	52.4	6e-07	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100620561 PREDICTED: toll-like receptor 4-like [Sus scrofa]. 330 8e-91

TLR4 toll-like receptor 4 precursor [Sus scrofa]. 330 8e-91

TLR2 toll-like receptor 2 [Sus scrofa]. 103 2e-22

TLR1 toll-like receptor 1 [Sus scrofa]. 84.7 7e-17

TLR6 toll-like receptor 6 [Sus scrofa]. 81.6 6e-16

TLR5 toll-like receptor 5 [Sus scrofa]. 71.2 8e-13

TLR10 toll-like receptor 10 [Sus scrofa]. 68.6 5e-12

TLR8 toll-like receptor 8 [Sus scrofa]. 56.6 2e-08

TLR7 toll-like receptor 7 [Sus scrofa]. 53.5 2e-07

Locus	Definition	Score	E value
LOC100620561	PREDICTED: toll-like receptor 4-like [Sus scrofa].	330	8e-91
TLR4	toll-like receptor 4 precursor [Sus scrofa].	330	8e-91
TLR2	toll-like receptor 2 [Sus scrofa].	103	2e-22
TLR1	toll-like receptor 1 [Sus scrofa].	84.7	7e-17
TLR6	toll-like receptor 6 [Sus scrofa].	81.6	6e-16
TLR5	toll-like receptor 5 [Sus scrofa].	71.2	8e-13
TLR10	toll-like receptor 10 [Sus scrofa].	68.6	5e-12
TLR8	toll-like receptor 8 [Sus scrofa].	56.6	2e-08
TLR7	toll-like receptor 7 [Sus scrofa].	53.5	2e-07

Assembly Members: 9 TOP

Library Plate Loc. Read Name Accession Full Seq.

AMP01 0001 B10 AMP01_0001_B10.b BW955007 AK230475
AMP01 0035 A09 AMP01_0035_A09.b BW957496
AMP01 0036 H08 AMP01_0036_H08.b BW957649
AMP01 0039 B01 AMP01_0039_B01.b BW957774
AMP01 0041 D05 AMP01_0041_D05.b BW957917
AMP01 0042 H03 AMP01_0042_H03.b BW958011 AK389696
AMP01 0044 H12 AMP01_0044_H12.b BW958144
AMP01 0071 B04 AMP01_0071_B04.b BW960152
DCI01 0091 H03 DCI01_0091_H03.b DB797683

SNPs: 2 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
129 A 2 0 0.500 W -
G 2 0 0.500
366 A 7 0 0.778 W N GAC/D
G 2 0 0.222 GGC/G

Alignment: TOP

20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0044_H12.b :       ccctttagcgatacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0042_H03.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxxxxx
AMP01_0071_B04.b :                                                             
AMP01_0041_D05.b :                                                             
AMP01_0039_B01.b :                                                             
AMP01_0036_H08.b :                                                             
DCI01_0091_H03.b :                                                             
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b :                                                             


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0044_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0042_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0071_B04.b :                                     nggagagananttttgcgaaccnt
AMP01_0041_D05.b :                                        nnggtgatatttatgggatat
AMP01_0039_B01.b :                                                    nngggatat
AMP01_0036_H08.b :                                                    nnggcgata
DCI01_0091_H03.b :                                                             
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b :                                                             


20110601C-014086 : .................................................AGAGGAGATAA
                   ---------+---------+---------+---------+---------+---------+ 11
AMP01_0044_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGGAGATAA
AMP01_0042_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGGAGATAA
AMP01_0071_B04.b : txxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0041_D05.b : cttgggctgctcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0039_B01.b : atataaggatacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0036_H08.b : nttttagggatatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0091_H03.b :         ntttatagatacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0001_B10.b :     gtatgtatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0035_A09.b :                                acctatagggatacttxxxxxxxxxxxxx


20110601C-014086 : ATATTAGAGAAACAAAAGTCCAGAATGCGAAGGCTGCCATTCTCACTTCCTCTTACCCCT
                   ---------+---------+---------+---------+---------+---------+ 71
AMP01_0044_H12.b : ATATTAGAGAAACAAAAGTCCAGAATGCGAAGGCTGCCATTCTCACTTCCTCTTACCCCT
AMP01_0042_H03.b : ATATTAGAGAAACAAAAGTCCAGAATGCGAAGGCTGCCATTCTCACTTCCTCTTACCCCT
AMP01_0071_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0041_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0039_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0036_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0091_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0001_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0035_A09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014086 : TAACCCAGTGCTGCTTTGAATAGAGTCAGTGCCCCCGGGCAGTGTGCTGAGGAGAGAAGA
                   ---------+---------+---------+---------+---------+---------+ 131
AMP01_0044_H12.b : TAACCCAGTGCTGCTTTGAATAGAGTCAGTGCCCCCGGGCAGTGCGCTGAGGAGAGAGGA
AMP01_0042_H03.b : TAACCCAGTGCTGCTTTGAATAGAGTCAGTGCCCCCGGGCAGTGCGCTGAGGAGAGAGGA
AMP01_0071_B04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGCCCCCGGGCAGTGTGCTGAGGAGAGAAGA
AMP01_0041_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGCCCCCGGGCAGTGTGCTGAGGAGAGAAGA
AMP01_0039_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGTGCTGAGGAGAGAAGA
AMP01_0036_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGTGCTGAGGAGAGAAGA
DCI01_0091_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGAGAGAAGA
AMP01_0001_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGAAGA
AMP01_0035_A09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014086 : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
                   ---------+---------+---------+---------+---------+---------+ 191
AMP01_0044_H12.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0042_H03.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0071_B04.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0041_D05.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0039_B01.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0036_H08.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
DCI01_0091_H03.b : CGGCAGTGCCTGGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0001_B10.b : CGGCAGTGCCTCGGAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT
AMP01_0035_A09.b : xxxxxxxxxxxxxxAGGCTGCTCTGACCAGCAGATACAGAGGGTCATGCTTTCTCCGGGT


20110601C-014086 : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
                   ---------+---------+---------+---------+---------+---------+ 251
AMP01_0044_H12.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0042_H03.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0071_B04.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0041_D05.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0039_B01.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0036_H08.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
DCI01_0091_H03.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0001_B10.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA
AMP01_0035_A09.b : CACTTCTGTTCACGGAAAATGCCAGGATGATTCCTCGCATCCGCCTGGCTGTGGCCACGA


20110601C-014086 : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
                   ---------+---------+---------+---------+---------+---------+ 311
AMP01_0044_H12.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0042_H03.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0071_B04.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0041_D05.b : TCCCAGCCATGGCCTTTCTCTCCCGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0039_B01.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0036_H08.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
DCI01_0091_H03.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0001_B10.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG
AMP01_0035_A09.b : TCCCAGCCATGGCCTTTCTCTCCTGCCTGAGATCTGAGAGCTGGGACCCTTGCGTGCAGG


20110601C-014086 : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
                   ---------+---------+---------+---------+---------+---------+ 371
AMP01_0044_H12.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGGCAACA
AMP01_0042_H03.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGGCAACA
AMP01_0071_B04.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
AMP01_0041_D05.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
AMP01_0039_B01.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
AMP01_0036_H08.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
DCI01_0091_H03.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
AMP01_0001_B10.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA
AMP01_0035_A09.b : TGGTTCCTAACATTAGTTACCAATGCATGGAGCTGAATTTCTACAAAATCCCTGACAACA


20110601C-014086 : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
                   ---------+---------+---------+---------+---------+---------+ 431
AMP01_0044_H12.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0042_H03.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0071_B04.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0041_D05.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0039_B01.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0036_H08.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
DCI01_0091_H03.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0001_B10.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA
AMP01_0035_A09.b : TCCCCACATCAGTCAAGATACTGGACCTGAGCTTTAACTACCTGAGTCATTTAGACAGCA


20110601C-014086 : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
                   ---------+---------+---------+---------+---------+---------+ 491
AMP01_0044_H12.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0042_H03.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0071_B04.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0041_D05.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0039_B01.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0036_H08.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
DCI01_0091_H03.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT
AMP01_0001_B10.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAG****GACGAAGACT
AMP01_0035_A09.b : ATAGCTTCTCCAGCTTTCCAGAACTGCAGGTGCTGGATTTATCCAGCCAGGACGAAGACT


20110601C-014086 : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
                   ---------+---------+---------+---------+---------+---------+ 550
AMP01_0044_H12.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0042_H03.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0071_B04.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0041_D05.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0039_B01.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0036_H08.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
DCI01_0091_H03.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0001_B10.b : GGGTGAGGAATGAACTGGTAAAGACTTGGGAGGGAGGGGGTGCCCCCTTTTCATCTCTGC
AMP01_0035_A09.b : GGGTGAGGAATGAACTGGTAAAGAACTTGGAG*GAGGGGGTGCCCCCTTTTCATCTCTGC


20110601C-014086 : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
                   ---------+---------+---------+---------+---------+---------+ 610
AMP01_0044_H12.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0042_H03.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0071_B04.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0041_D05.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0039_B01.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0036_H08.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
DCI01_0091_H03.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0001_B10.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATCATCCAGGAAGGT
AMP01_0035_A09.b : CTTCACTACAGAGACTTCATTCCCGGTGTGGCCATCGCTGCTAACATTATCCAGGAAGGT


20110601C-014086 : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
                   ---------+---------+---------+---------+---------+---------+ 670
AMP01_0044_H12.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0042_H03.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0071_B04.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0041_D05.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0039_B01.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0036_H08.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
DCI01_0091_H03.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGGGCCGATGG
AMP01_0001_B10.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG
AMP01_0035_A09.b : TTCCACAAAAGTCGGAAGGTTATTGTCGTGGTGTCCCAGCACTTCATACAGAGCCGATGG


20110601C-014086 : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
                   ---------+---------+---------+---------+---------+---------+ 729
AMP01_0044_H12.b : TGTATCTTTTGAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAAGAGTCATGCCGGCAT
AMP01_0042_H03.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
AMP01_0071_B04.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
AMP01_0041_D05.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
AMP01_0039_B01.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAAGAGTCATGCCGGCAT
AMP01_0036_H08.b : TGTATCTTT*GAGTATGAGATTGCCCGGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
DCI01_0091_H03.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
AMP01_0001_B10.b : TGTATCTTT*GANTATGAGATTGCCCAAACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT
AMP01_0035_A09.b : TGTATCTTT*GAGTATGAGATTGCCCAGACCTGGCAGTTTCTGAGGAGTCATGCCGGCAT


20110601C-014086 : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT
                   ---------+---------+---------+---------+---------+---------+ 788
AMP01_0044_H12.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAATTCCCTGCTGCCGCAGCAGGTGGAGCTGT
AMP01_0042_H03.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT
AMP01_0071_B04.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTNGCGCAGCAAGTGGAGCTGT
AMP01_0041_D05.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT
AMP01_0039_B01.b : CATCTTCATCGTCCTGCAGAAGTTGGNAGAAGTCCCTGCTGCCGCAGCAGGTGGAGCTGT
AMP01_0036_H08.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT
DCI01_0091_H03.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT
AMP01_0001_B10.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAtccctgctgcggcacgcagtgt      
AMP01_0035_A09.b : CATCTTCATCGTCCTGCAGAAGTTGG*AGAAGTCCCTGCTGCGGCAGCAGGTGGAGCTGT


20110601C-014086 : ATCGCCTTCTCAGCAGGAATACCTACCTGGAGTGGGAAGACAGCGTCCTGGGGCGGCACA
                   ---------+---------+---------+---------+---------+---------+ 848
AMP01_0044_H12.b : ATCGCCTTCTCAACAAGAATACCTACCTGGAGTGGGAAGACAGCcgtcctgggccggcac
AMP01_0042_H03.b : ATCGCCTTCTCAGCANGAATACCTACCTGGAGTGGGAAGACAGCGTCCTGGGGGCGCACA
AMP01_0071_B04.b : ATCGCCTTCTCAGCANGAATACCTACCTGGAGTGGGAAGACAGCGTCCTGGGGCGcatct
AMP01_0041_D05.b : ATCGCCTTCTCAGCANGAATACCTACCTGGAGTGAGAAGACAGCGTCCTGGGGCGGCACA
AMP01_0039_B01.b : ATCGCCTTCTCAACAGGAATACCTACCTGGAGTGGGAAGACAGCGTCCTGGGGCGGCACT
AMP01_0036_H08.b : ATCGCCTTCTCAGCANGAATACCTACCTGGAGTGGGAAGACAGCGTCCTGGGGCGGCACA
DCI01_0091_H03.b : ATCGCCTTCTCAGCANGAATACCTACCTGGAGTGGGAGGACAGCGTCCTGNGGCGGCACA
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : ATCGCCTTCTCAGCAGGAATACCTACCTGGAGTGAGAAGACAGCGTCCTGGGGCGGCACA


20110601C-014086 : TCTTCTGGAGACGACTCAAGAAAGCCTTGCTGGATGGTAAACCATGGAGTCCAGAAGGAA
                   ---------+---------+---------+---------+---------+---------+ 908
AMP01_0044_H12.b : ctccttcggaagaccactcaaaaaagccttggctgatggtaaaccctggagtcccaaaag
AMP01_0042_H03.b : TCTTCTGGAGACGACTCNAGAAAGCC*TGCTGGATGGTAAACCATGGAGTCCAGAAGGAA
AMP01_0071_B04.b : cttctggnagacgactcagaaagcttgctggatggtaancatgnagtccagangggacag
AMP01_0041_D05.b : TCTTCTGGAGACGACTNCAGAAAGCCTTGCTGGATGGTAAACCATGGAGTCCAGAANGGA
AMP01_0039_B01.b : TCTTCggagaccactcagaaaagcctgctggatggtaaccatggattccaaaagaaccta
AMP01_0036_H08.b : TCTTCTGGAGACGACTCAAGAAAGCCTTGCTGGATGGTAAccatggagtccagaaggact
DCI01_0091_H03.b : TCTTCTGGAGACGACTCAAGAAAGCCTTGCTGGATGGNTAACCATGGAGTCCAGAAGGAA
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : TCTTCTGGAGACGACTCAAGAAAGCCTTGCTGGATGGTAAACCATGGAGTCCAGAAAGAA


20110601C-014086 : CAGAGGATTCAGAAAGCACCCAGCATGATACCACAGCCTTCACTTAAGGAGGGAAAACTN
                   ---------+---------+---------+---------+---------+---------+ 968
AMP01_0044_H12.b : gaaccgaggaatccaaaagccacccgccatgatacccccgcccttcccttaaggaaggaa
AMP01_0042_H03.b : CAGAGattcnaaagcaccngcatgatacaccgccttccctttaagaggaaaactcccnac
AMP01_0071_B04.b : agattcnaaagcacccngctgatacacagccttcacttaggaggaaaactccnacgtgtc
AMP01_0041_D05.b : CAGAGGATTCAAAAAGCACCCAGCATGATACacagcctcactgangagggaaaactccac
AMP01_0039_B01.b : ggatttccaaagcccccgcctgatacacccgccttcctttaggagggaaaactcccaccc
AMP01_0036_H08.b : agagattcgaaagcaccagcatgatccacagccttcacttaagaggaaaactcccacgtg
DCI01_0091_H03.b : CAGAGGATTCAGAAAagcaccagcatggatacacagccttcacttnaagagggaaaactc
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : CAGAGGATTCAGAAAGCAACCAGCATGATACCACAGCCTTCACTTAAGGAGGGAAAACTN


20110601C-014086 : CCCACGTGTCCCTTGGTCAGCTGGATCCCGTGCTTGTTTACCAGTACTAAATCCTGCA..
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b : aactccccacgtggccccttgggcccccggaatccccgtggctgttaaacaataactaaa
AMP01_0042_H03.b : tggtccctgggcacctggatccgtgcctgtaacaatacaaatcttgcaaatgccaaaccg
AMP01_0071_B04.b : cctggntcgctggatcccgtgcttgtacagtactaatctgnaactgccnagcctgtgcag
AMP01_0041_D05.b : gtgtccctggtcagctggatccccgtgctgtacagtactaatcctgcacatgccagcctg
AMP01_0039_B01.b : tggcccttggccaaccgggaccggtggctggttacaagtactaaatccctgcacttgccc
AMP01_0036_H08.b : tccctggtcagctggatccccgtgctgtacaatactaatcctgcacatgcaagcctgtgc
DCI01_0091_H03.b : ccnacgtgtcccctggtcagctggatcccgtgctttgttacaagtactaaatccctgcac
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : CCCACGTGTCCCTTGGTCAGCTGGATCCCGTGCTTGTTTACCAGTACTAAATCCTGCAac


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b : tcc                                                        
AMP01_0042_H03.b : gggccaggggttgggaattctgaatccaagaaaccccgatgcccttccttgggttttcaa
AMP01_0071_B04.b : gtttgttgatcatatgcccaaatccccgactgcgttcttggatttaaattaagggacaac
AMP01_0041_D05.b : tgccagggctggtgattcntgatgccgaaataccaggatgcccgtctctggagttacaat
AMP01_0039_B01.b : agccctgggcaaggggctggtgattccttgatgcccaaaataccagaactgcccgttccc
AMP01_0036_H08.b : agggctgtgattcntgtgccgagataccngactgccgtctctggattacaattgagggac
DCI01_0091_H03.b : atgccnagcactgtgcccagggctggtgattcantgatgcccgaagatcacaggactgcc
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : atgcccagcactgtgcaaggggctgttgattcantgatgcccgaaatacacaggactgcc


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b :                                                             
AMP01_0042_H03.b : ttaaggggccaaccggttcaaaaccaaattcccgggggattttaaaaaacgcaggggccg
AMP01_0071_B04.b : ccttctaaaacaacttcgggggatttctcaaacccaggcgccgaaggaagcattcccttc
AMP01_0041_D05.b : taaaggactaacctgttctaatccaacttccggggatgttcatcaatccccagggtccga
AMP01_0039_B01.b : ttggaattttccatttaaagggcctaaccctgttttcaaaaaacaaaacttcccggggga
AMP01_0036_H08.b : taccctgtctaaaatccactgcggtggattgttcatcatcgctaggctccgggagggaaa
DCI01_0091_H03.b : agtctccatgagttaacattttaagggacttaaccctgttcaaaatacagaacttccggt
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : cgtctcatggagtttacatttaaagggactaaaccctggtctaaaatacacaactgcagg


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b :                                                             
AMP01_0042_H03.b : aaaggaaactttttt                                            
AMP01_0071_B04.b : gccaattttaaacaacccggcccccccaaggaaatttctcggttttggaccccccgcgtt
AMP01_0041_D05.b : aaggaagccatcacctacgcctcatgttttaaccaaactcgacccccccgaaaggacaat
AMP01_0039_B01.b : attttccttccacccgcctaaggg                                   
AMP01_0036_H08.b : ccatccccctaccgctcattgttaaactaatcctaccccccaggaaaagcaaatttcctg
DCI01_0091_H03.b : gaatgtcccatcantcanctaaggcgtccagacagggaagcccattcactccttggccac
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : gtgaatgtttcaatcaaatcagcttgggcgtccgggaagggaaaaccaattcaactcctt


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b :                                                             
AMP01_0042_H03.b :                                                             
AMP01_0071_B04.b : tatttaaaatgtgggctcgaaggggggtttccttccccaaaagggcccccccttctact
AMP01_0041_D05.b : tctctctggctttttgaagcccgcggcagtt                            
AMP01_0039_B01.b :                                                             
AMP01_0036_H08.b : gttttttgaaagtcttgt                                         
DCI01_0091_H03.b : taattgatttaaactaaactccgaaccccctccccggaaaaaggaagagttttcctcggg
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b : aacc                                                       


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b :                                                             
AMP01_0042_H03.b :                                                             
AMP01_0071_B04.b :                                                             
AMP01_0041_D05.b :                                                             
AMP01_0039_B01.b :                                                             
AMP01_0036_H08.b :                                                             
DCI01_0091_H03.b : actcttttgggaaacgccctcggccaggtttaaactttaacacaatgtttggaagtttcc
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b :                                                             


20110601C-014086 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1026
AMP01_0044_H12.b :                                                             
AMP01_0042_H03.b :                                                             
AMP01_0071_B04.b :                                                             
AMP01_0041_D05.b :                                                             
AMP01_0039_B01.b :                                                             
AMP01_0036_H08.b :                                                             
DCI01_0091_H03.b : gcacaggggggggttttctctctctccaacgtttaaaaagagccgtatcacccccccc 
AMP01_0001_B10.b :                                                             
AMP01_0035_A09.b :