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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014193

Length: 1,257

Sequence [FASTA format sequence]
TTTGCTGAAA ATTCAAATAA ACGTCGATGG CGGCGAAAGC GGACGGAGCC CCTCAGCGCT
GGGTTCATTC AGAGCCCGCG CTCTCCCAGC CTCGAGACAG GCGGGGGAGG AAGCGGCTCC
AGTAAAGTGA CAATCGGAGA AGGAAAAGCA GCCTTTCCTC CCGGGGGAGC AGAGGCGGCC
CGGCGGGCAG AGGGAACCTG CAGAGGGCGG TTTCTCTCCT CTTTTCCTGT CCCACCCAGT
CGGCCAGCCC CCCCACCCCC ACTCCCGACC GGCCTCGGCC GCTAACTCCG CGCGTCTCTC
CGCCGCTCCC TCACTTCGGT GTCCCCGGCA GGTCCCTGCG ACCCCTGCCG TAGCCGCCCC
CGTCGAGTTG GGAAGGACGC GCGGAGCGGC GCCCGGCCCT TCGGCGGCAG CCCGTCCGAC
TGGTAAGATC TGCACCTCCC GTCCACCTGA CGCGATGACG AACCTCACAA CCGTGCCTTC
TCCAGGAGAA CTGATGAGCA GCCCAATTCT ACGGCCCACT GAGGCCCCGT CCCCAGAAGC
TGAAGCCAGC ACAGCACTCA TTGCAGTTGT CATCACCGTG GTCTTCCTCA CCCTGCTCTC
TGTCGTGGTC CTGATCTTCT TTTACCTGTA CAAGAACAAA GGCAGCTACG TCACCTACGA
ACCTGCCGAA GGCGAGCCCG GCGCCGTCCT CCAGATGGAG AGTAACTCCG CCAAGGGCAA
GGAGAAGGAG GAATACTTCA TCTAATGGTT CCCGGGCCCC AAGGAGCTCA TCCAGGCTCC
AGTGCTGACA CACTATTTAT TAGGTGAGAG TTTTATCTGA AACCGATGAG AAGCATCCAT
CGCTGTGGGC AGACCGGAGC TCCTTCCAGG ACCCAGGCCC AAATGCCAGC ATCACAGACG
CCAGGGCCCA GAGACCCGGA GAAAGCGGCT CACGAAGTCT CGAGTCAGAC CTTTGTCATA
CAGCTGGTGT TTGTGATTGA GAGCGACGAG GTGGAGCCGT ACCAGGCAGC CCCCGGGTAC
TGCCTGGCCA TCGTCACTTT CTCTACAGCT CAGAGGGAAG GAGAGTTGGG GGTCACTGGT
TGCTCCTGCG TTCCCTACCT GGTCACCTAG CGACAGCCCG AGTGCAAATA GTGTCCCCTG
GAAGCTCCTC CCAGAGGCCG GAGCCCACAG TGAAAGGGCA GGCCGGGAGG GGCAGGAGGG
CCGTGAAGAC GTCACTGCTG AAGGGGCGGG CCACCTCCCT TAACTTGAGC CCTTCCT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSMAGPsmall cell adhesion glycoprotein [Homo sapiens]. 81.32e-15O
Contig/Assembly ProteinSMAGPsmall cell adhesion glycoprotein [Homo sapiens]. 81.32e-15O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSmagpsmall cell adhesion glycoprotein [Mus musculus]. 80.53e-15O
Contig/Assembly ProteinSmagpsmall cell adhesion glycoprotein [Mus musculus]. 80.53e-15O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSMAGPsmall cell adhesion glycoprotein [Bos taurus]. 77.82e-14O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100520133PREDICTED: small cell adhesion glycoprotein-like [Sus scrofa]. 1102e-24O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVR010015B03LVR01_0015_B03.bBP442024 AK345823
MLN010028F01MLN01_0028_F01.bBW963474 
OVR010018D08OVR01_0018_D08.bBP142861 
OVRM10019E08OVRM1_0019_E08.bBP459016 
OVRM10085E01OVRM1_0085_E01.bBP149966 AK348167
SMG010018C07SMG01_0018_C07.bFS714808 
SMG010051C07SMG01_0051_C07.bFS717703 
SPL010098E12SPL01_0098_E12.bCJ021854 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
658C500.714BSTAC/Y
T020.286TAT/Y


Alignment:      TOP

20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0015_B03.b : ctttatcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SMG01_0018_C07.b : ngggtcaaannnnggatacagcagcx
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b :
OVR01_0018_D08.b :
MLN01_0028_F01.b :
OVRM1_0019_E08.b :
20110601C-014193 : ........................TTTGCTGAAAATTCAAATAAACGTCGATGGCGGCGA
---------+---------+---------+---------+---------+---------+ 36
LVR01_0015_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxTTTGCTGAAAATTCAAATAAACGTCGATGGCGGCGA
SMG01_0018_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGTCGATGGCGGCGA
SPL01_0098_E12.b : ntttcgctaggactatnacagtttgtacxxxxxxxxxxxxxxxxxxxxx
OVRM1_0085_E01.b :
SMG01_0051_C07.b :
OVR01_0018_D08.b :
MLN01_0028_F01.b :
OVRM1_0019_E08.b :
20110601C-014193 : AAGCGGACGGAGCCCCTCAGCGCTGGGTTCATTCAGAGCCCGCGCTCTCCCAGCCTCGAG
---------+---------+---------+---------+---------+---------+ 96
LVR01_0015_B03.b : AAGCGGACGGAGCCCCTCAGCGCTGGGTTCATTCAGAGCCCGCGCTCTCCCAGCCTCGAG
SMG01_0018_C07.b : AAGCGGACGGAGCCCCTCAGCGCTGGGTTCATTCAGAGCCCGCGCTCTCCCAGCCTCGAG
SPL01_0098_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCAGAGCCCGCGCTCTCCCAGCCTCGAG
OVRM1_0085_E01.b : cagttgt
SMG01_0051_C07.b : nnccctttttnnnngg
OVR01_0018_D08.b :
MLN01_0028_F01.b :
OVRM1_0019_E08.b :
20110601C-014193 : ACAGGCGGGGGAGGAAGCGGCTCCAGTAAAGTGACAATCGGAGAAGGAAAAGCAGCCTTT
---------+---------+---------+---------+---------+---------+ 156
LVR01_0015_B03.b : ACAGGCGGGGGAGGAAGCGGCTCCAGTAAAGTGACAATCGGAGAAGGAAAAGCAGCCTTT
SMG01_0018_C07.b : ACAGGCGGGGGAGGAAGCGGCTCCAGTAAAGTGACAATCGGAGAAGGAAAAGCAGCCTTT
SPL01_0098_E12.b : ACAGGCGGGGGAGGAAGCGGCTCCAGTAAAGTGACAATCGGAGAAGGAAAAGCAGCCTTT
OVRM1_0085_E01.b : cxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCTTT
SMG01_0051_C07.b : agtaaagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtggctTTT
OVR01_0018_D08.b :
MLN01_0028_F01.b :
OVRM1_0019_E08.b :
20110601C-014193 : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
---------+---------+---------+---------+---------+---------+ 216
LVR01_0015_B03.b : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
SMG01_0018_C07.b : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
SPL01_0098_E12.b : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
OVRM1_0085_E01.b : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
SMG01_0051_C07.b : CCTCCCGGGGGAGCAGAGGCGGCCCGGCGGGCAGAGGGAACCTGCAGAGGGCGGTTTCTC
OVR01_0018_D08.b : tggggtgaacttattagxxxxxxxxxxxxxxxxxxxxx
MLN01_0028_F01.b :
OVRM1_0019_E08.b :
20110601C-014193 : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
---------+---------+---------+---------+---------+---------+ 276
LVR01_0015_B03.b : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
SMG01_0018_C07.b : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
SPL01_0098_E12.b : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
OVRM1_0085_E01.b : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
SMG01_0051_C07.b : TCCTCTTTTCCTGTCCCACCCAGTCGGCCAGCCCCCCCACCCCCACTCCCGACCGGCCTC
OVR01_0018_D08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCCCGACCGGCCTC
MLN01_0028_F01.b : aggntttgcttggc
OVRM1_0019_E08.b :
20110601C-014193 : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
---------+---------+---------+---------+---------+---------+ 336
LVR01_0015_B03.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
SMG01_0018_C07.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
SPL01_0098_E12.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
OVRM1_0085_E01.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
SMG01_0051_C07.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
OVR01_0018_D08.b : GGCCGCTAACTCCGCGCGTCTCTCCGCCGCTCCCTCACTTCGGTGTCCCCGGCAGGTCCC
MLN01_0028_F01.b : ctatnacagtttgtacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0019_E08.b :
20110601C-014193 : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
---------+---------+---------+---------+---------+---------+ 396
LVR01_0015_B03.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
SMG01_0018_C07.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
SPL01_0098_E12.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
OVRM1_0085_E01.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGTGCGGCGCCCGG
SMG01_0051_C07.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
OVR01_0018_D08.b : TGCGACCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
MLN01_0028_F01.b : xxxxxxCCCTGCCGTAGCCGCCCCCGTCGAGTTGGGAAGGACGCGCGGAGCGGCGCCCGG
OVRM1_0019_E08.b :
20110601C-014193 : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
---------+---------+---------+---------+---------+---------+ 456
LVR01_0015_B03.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
SMG01_0018_C07.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
SPL01_0098_E12.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
OVRM1_0085_E01.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
SMG01_0051_C07.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
OVR01_0018_D08.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGTT
MLN01_0028_F01.b : CCCTTCGGCGGCAGCCCGTCCGACTGGTAAGATCTGCACCTCCCGTCCACCTGACGCGAT
OVRM1_0019_E08.b : nagttgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-014193 : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
---------+---------+---------+---------+---------+---------+ 516
LVR01_0015_B03.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
SMG01_0018_C07.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
SPL01_0098_E12.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
OVRM1_0085_E01.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
SMG01_0051_C07.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
OVR01_0018_D08.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
MLN01_0028_F01.b : GACGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
OVRM1_0019_E08.b : xxCGAACCTCACAACCGTGCCTTCTCCAGGAGAACTGATGAGCAGCCCAATTCTACGGCC
20110601C-014193 : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
---------+---------+---------+---------+---------+---------+ 576
LVR01_0015_B03.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
SMG01_0018_C07.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
SPL01_0098_E12.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
OVRM1_0085_E01.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
SMG01_0051_C07.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
OVR01_0018_D08.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
MLN01_0028_F01.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
OVRM1_0019_E08.b : CACTGAGGCCCCGTCCCCAGAAGCTGAAGCCAGCACAGCACTCATTGCAGTTGTCATCAC
20110601C-014193 : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
---------+---------+---------+---------+---------+---------+ 636
LVR01_0015_B03.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
SMG01_0018_C07.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
SPL01_0098_E12.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
OVRM1_0085_E01.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
SMG01_0051_C07.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
OVR01_0018_D08.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTCTTACCTGTACAAGAA
MLN01_0028_F01.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
OVRM1_0019_E08.b : CGTGGTCTTCCTCACCCTGCTCTCTGTCGTGGTCCTGATCTTCTTTTACCTGTACAAGAA
20110601C-014193 : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
---------+---------+---------+---------+---------+---------+ 696
LVR01_0015_B03.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
SMG01_0018_C07.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
SPL01_0098_E12.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
OVRM1_0085_E01.b : CAAAGGCAGCTACGTCACCTATGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
SMG01_0051_C07.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
OVR01_0018_D08.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
MLN01_0028_F01.b : CAAAGGCAGCTACGTCACCTACGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
OVRM1_0019_E08.b : CAAAGGCAGCTACGTCACCTATGAACCTGCCGAAGGCGAGCCCGGCGCCGTCCTCCAGAT
20110601C-014193 : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
---------+---------+---------+---------+---------+---------+ 756
LVR01_0015_B03.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
SMG01_0018_C07.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGGAGAATACTTCATCTAATGGTTCCCGGG
SPL01_0098_E12.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
OVRM1_0085_E01.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
SMG01_0051_C07.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACCTCATCTAATGGTTCCCGGG
OVR01_0018_D08.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
MLN01_0028_F01.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
OVRM1_0019_E08.b : GGAGAGTAACTCCGCCAAGGGCAAGGAGAAGGAGGAATACTTCATCTAATGGTTCCCGGG
20110601C-014193 : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
---------+---------+---------+---------+---------+---------+ 816
LVR01_0015_B03.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
SMG01_0018_C07.b : CTCTNAGGAGCTCATCCAGNCTCCCGTGCTGACACCCTATTTATTAGGTGAGAGTTTTAT
SPL01_0098_E12.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
OVRM1_0085_E01.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
SMG01_0051_C07.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
OVR01_0018_D08.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
MLN01_0028_F01.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
OVRM1_0019_E08.b : CCCCAAGGAGCTCATCCAGGCTCCAGTGCTGACACACTATTTATTAGGTGAGAGTTTTAT
20110601C-014193 : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCAGGACCCA
---------+---------+---------+---------+---------+---------+ 875
LVR01_0015_B03.b : CTGAAACCGATGAGAAACATCCATCGCTGTGGGCAGACCGGA*GCTCCTTTCAGGACCCA
SMG01_0018_C07.b : CTGGAAACGATGAGAAGCATCCATCGCTGTGGGCAAACCGGA*GCT*CTTCCAGGACCCA
SPL01_0098_E12.b : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGAAGCTCCTTCCAGGACCCA
OVRM1_0085_E01.b : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCCAGGACCA
SMG01_0051_C07.b : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCAGGACCCA
OVR01_0018_D08.b : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCAGGACCCA
MLN01_0028_F01.b : CTGACACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCAGGACCCA
OVRM1_0019_E08.b : CTGAAACCGATGAGAAGCATCCATCGCTGTGGGCAGACCGGA*GCTCCTTCCAGGACCCA
20110601C-014193 : GGCCCAAATGCCAGCATCACAGACGCCAGGGCCCAGA*GACCCGGAGAAAGCGGCTCACG
---------+---------+---------+---------+---------+---------+ 934
LVR01_0015_B03.b : GGCCCAAATGCCAGCATCACAGACCCCGGGGCCAA*AAGACCCCGAGAAAGCGGCTCACG
SMG01_0018_C07.b : GGCCaaatgccagcctccagaacccggggcccaaaaaacccgagaaagcgcttccgaatt
SPL01_0098_E12.b : GGCCCAAATGCCAGCATCACAGACGCCAGGGCCCcagagaccccggagaaagcggctcac
OVRM1_0085_E01.b : GGCCCNAATGCCAGCATCACAGACGC
SMG01_0051_C07.b : GGCCCAAATGCCAGCATCACAGACGCCAGGGCCCAGAAGACCCGGAGAAAGCGGCTCACG
OVR01_0018_D08.b : GGCCCAAATGCCAGCATCACAGACGCCAGGGCCCAGA*GACCCGGAGAAAGCGGCTCACG
MLN01_0028_F01.b : GGCCCAGATGCCAGCATCACAGACGCCAGGGCCCAGA*GACCCGGAGAAAGCGGCTCACG
OVRM1_0019_E08.b : GGCCCAAATGCCAGCATCACAGACGCCAGGGCCCAGA*GACCCGGAGAAAGCGGCTCACG
20110601C-014193 : AAGTCTCGAGTCAGACCTTTGTCATACAGCTGGTGTTTGTGATTGA**GAGCGACGAGGT
---------+---------+---------+---------+---------+---------+ 992
LVR01_0015_B03.b : AAGTCTTCAGTCCGAACTTTGTCATACAGCTGGgtgtttgtgaattgaacgaacagggtg
SMG01_0018_C07.b : cccgagtcaacctttgtcaaacacttggggttggggatgaccgaacaaggtgaacctaac
SPL01_0098_E12.b : gaaagtctcgagtcagaacttttgtcataacagctggtgttttgtgattgaacgaacaag
OVRM1_0085_E01.b :
SMG01_0051_C07.b : AAGTCTCGAGTCAGACCTTTGTCATACAGCTGGTGTTTGTGATT****GAGCGACGAGGT
OVR01_0018_D08.b : AAGTCTCGAGTCAGACCTTTGTCATACAGCTGGTGTTTGTGATT****GAGCGACGAGGT
MLN01_0028_F01.b : AAGTCTCGAGTCAGACCTTTGTCATACAGCTGGTGTTTGTGATT****GAGCGACGAGGT
OVRM1_0019_E08.b : AAGTCTCGAGCCAGACCTTTGTCATACAGCTGGTGTTTGTGATTGATTGAGCGACGAGGT
20110601C-014193 : GGAGCCGTACCAGGCAGCCCCCGGGTACTGCCTGGCCATCGTCACTTTCTCTACAGCTCA
---------+---------+---------+---------+---------+---------+ 1052
LVR01_0015_B03.b : gaacccgttccagggcaacccccgggggaaccggcctgggccatcgttccctttttttcc
SMG01_0018_C07.b : caggaacccccgggtaaggccgggcattgccactttccccattcaaaaggaaggaaattg
SPL01_0098_E12.b : gtggaaaccgtaccaaggcagccacccggggtactggccttggccattcgttcacttttt
OVRM1_0085_E01.b :
SMG01_0051_C07.b : GGAGCCGTACCAGGCAGGCACCGGGTACTGGCTGGCCATCGTCACTTcttcacagctcaa
OVR01_0018_D08.b : GGAGCCGTACCAGGCAGCCACCGGGTACTGCCTGGCCATCGTCACTTTCTCCACAGCTCA
MLN01_0028_F01.b : GGAGCCGTACCAagcagccaccgggtactgcctgggcatcgtcactttctccacagctca
OVRM1_0019_E08.b : GGAGCCGTACCAGGCAGCCCCCGGGTACTGCCTGGCCATCGTCACTTTCTCTACAGCTCA
20110601C-014193 : GAGGGAAGGAGAGTTGGGGGTCACTGGTTGCTCCTGCGTTCCCTACCTGGTCACCTAGCG
---------+---------+---------+---------+---------+---------+ 1112
LVR01_0015_B03.b : acacctcccaaaggggaagggaaaagtttggggggggcccctggggttggccccccttgg
SMG01_0018_C07.b : gggccccgggtgccccgggttcccaccggcccctaggacccccagggcaatatgtccccg
SPL01_0098_E12.b : tcccccgccttcaaaagggaaaggaagaatttggggggtta
OVRM1_0085_E01.b :
SMG01_0051_C07.b : aggaaagaaatttgggggccacggttgctcctgcgttccctactggtcactagcgacacc
OVR01_0018_D08.b : GAGGGAAGGAGAGTTGGGGGTCACTGGTTGCTCCTGCGTTCCCTACCTGGTCACCTAGCG
MLN01_0028_F01.b : aagggaaggagaattgggggtcactgggttgctcctgcgttccttaccgggtcacctagc
OVRM1_0019_E08.b : GAGGGAAGGAGAGTTGGGGGTCACTGGTTGCTCCTGCGTTCCCTACCTGGTCACCTAGCG
20110601C-014193 : ACAGCCCGAGTGCAAATAGTGTCCCCTGGAAGCTCCTCCCAGAGGCCGGAGCCCACAGTG
---------+---------+---------+---------+---------+---------+ 1172
LVR01_0015_B03.b : gtttttccccttaccctgggtctccccccttaaccccaaacccccccccccaaagggggg
SMG01_0018_C07.b : ggaacccccccaaaggcggaaccccttaaaagccctcccggggggccagagccctcaaaa
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : cgaatgcaaatatgtccctggaagctcctccaaaagccggacccacaatggaaggcaggc
OVR01_0018_D08.b : ACAGCCCGAGTGCAAATAGTGTCCCCTGGAAGCTCCTCCCAGAGGCCGGAGCCCACAGTG
MLN01_0028_F01.b : gacaggcccgagtggcaataatggtccctggaacctccccccgaaggccggaacccaaat
OVRM1_0019_E08.b : ACAGCCCGAGTGCAAATAGTGTCCCCTGGAAGCTCCTCCCAGAGGCCGGAGCCCACAGTG
20110601C-014193 : AAAGGGCAGGCCGGGAGGGGCAGGAGGGCCGTGAAGACGTCACTGCTGAAGGGGCGGGCC
---------+---------+---------+---------+---------+---------+ 1232
LVR01_0015_B03.b : caaaaaaaaaaaggtgggtttcccccccccccctgggg
SMG01_0018_C07.b : cccctctgaagggggggccccccctataaggggccttctcccagaccgggaaaaaaaaag
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : ccgaagggcaggaggccttaaaacctcctgctaaaggcgggccacctccttaactgagct
OVR01_0018_D08.b : GAAGGGCAGGCCGGGAGGGGCAGGAGGGGCGTGAAGACGTCACTGCTGAAGGGGCGGGCC
MLN01_0028_F01.b : ggaaggccgggcccggaagggcaggaaggcccttaaaactccccgccgaaagggggggcc
OVRM1_0019_E08.b : AAAGGCCAGGCCGGGAGGGGCNAGAGGGCCGTGAAGACGTCACTGCT
20110601C-014193 : ACCTCCCTTAACTTGAGCCCTTCCT...................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b : gggtgttttcaaaaaaattttctgaaaaaaaaaaaaaaaaaacactgttcctgtgggggc
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : ttctcccaaatcccggaaccaaataggcgttttttcgaattaaaatttcttgtcaccaaa
OVR01_0018_D08.b : ACCTCCCTTAACTTGAGCCCTTCCTtcccacagtccccggcaacccagacgtanggctgt
MLN01_0028_F01.b : ccctccctttactgaggccttcttcccccggtcccgggaacccaaaaatgggggtttttt
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b : ccccatatatccgggggccaaccacccccttttaagggcccaag
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : aaaaaaaaaaaaggccctggcctaactgggtccgccccttaaaattcccggggccaatta
OVR01_0018_D08.b : ttttatcgggattaaaaattttcatttgatacagaaaaaaaaaaaaaaaaaaaaaagggc
MLN01_0028_F01.b : cggatattaaattttcttggtacgggaaaaaaaaaaaaaaaagggcccttggtgtcaaat
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b :
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : ggaaccattttgtaaaaggcccaagggagaataaaacagaggggccttttaaccgtcggg
OVR01_0018_D08.b : cccttggtgctccaaacttgaaggttccccgggcccccttcttaaaagattttcccctct
MLN01_0028_F01.b : tccgggccgggccctttaagtttcccccggggggccaagtttaccgtccccctttttttt
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b :
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : aaaatcttgggattttgaactctttggtggaagtgaacccacaatccgggaaaaattgtg
OVR01_0018_D08.b : agaggggggcccccaaagccttttacccccggtaacccccccaccctttttttttttttt
MLN01_0028_F01.b : aaaaagggccccctatgtagcccaatataacccggcccggggcgttttttaacccccgac
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b :
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b : gggtcac
OVR01_0018_D08.b : gttttt
MLN01_0028_F01.b : ggggaaaacccaacttgggatcttgggaggaacccctcttggggggggaattgagaaacc
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b :
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b :
OVR01_0018_D08.b :
MLN01_0028_F01.b : cccccggaattaagccccggggaaaaaaatttttggtgaaggggtgaaaacgcctgctgc
OVRM1_0019_E08.b :
20110601C-014193 : ............................................................
---------+---------+---------+---------+---------+---------+ 1257
LVR01_0015_B03.b :
SMG01_0018_C07.b :
SPL01_0098_E12.b :
OVRM1_0085_E01.b :
SMG01_0051_C07.b :
OVR01_0018_D08.b :
MLN01_0028_F01.b : tct
OVRM1_0019_E08.b :