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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014312

Length: 1,983

Sequence [FASTA format sequence]
TTGTTTACCT GACTCTGGAC AGCTTCGATG CCATGTTCCG GGAGGCCAAC CACAACGTGT
CGGCACCCTA TGGGAGGATC ACTCTCCACG TCTTCTGGGA GCTCAACTAC GACTTCCTGC
CCAACTACTG CTACAATGGC TCCACCAATC GATTTGTTCG GACAGTATTA CCATTTTCTC
AAGAATTTCA AAGGGATAAA CAGCCAAATG CACAACCCCA GTATTTGCAT GGATCAAAGG
CTTTAAACCT GGCCTATTCG AGCATCTATG GCAGCTACCG GAACTTCGTG GGCCCCCCCC
ACTTCCAGGT CATCTGCCGG CTGCTTGGCT ACCAGGGCAT CGCAGTGGTC ATGGAAGAGC
TGCTGAAGGT GGTTAAGAGC CTGCTGCAAG GCACCATCCT GCAGTACGTG AAGACGCTGA
TGGAGGTGAT GCCCAAGGTC TGCCGGCTGC CGCGGCACGA GTACGGCTCC CCTGGCATCC
TGGAGTTCTT CCACCACCAG CTGAAGGACA TCGTGGAGTA CGCGGAGCTG AAGACCGTGT
GCTTCCAGAA CCTGCGGGAG GTGGGCAATG CCGTCCTCTT CTGCCTGCTC ATCGAGCAGA
GCCTGTCTTT GGAAGAAGTG TGTGACCTGC TGCATGCAGC CCCGTTCCAG AACATATTGC
CGAGAGTCCA CGTGAAAGAG GGAGAGAGAC TTGATGCCAA AATGAAAAGA CTAGAATCAA
AGTACGCCCC ACTTCATCTT GTCCCTCTGA TTGAAAGACT GGGAACCCCT CAGCAAATTG
CAATAGCGAG AGAGGGGGAC CTGCTGACAA AGGAGCGTCT CTGCTGTGGC CTGTCCATGT
TTGAAGTCAT CCTGACTCGG ATCCGGACCT TTCTGGATGA CCCCATCTGG CGCGGGCCTC
TGCCCAGCAA CGGGGTCATG CACGTGGATG ACTGCGTCGA GTTTCACAGG CTGTGGAGCG
CCATGCAGTT TGTCTACTGC ATTCCCGTGG GGACACATGA GTTTACGGTC GAACAGTGTT
TTGGCGACGG GCTCCACTGG GCTGGCTGCA TGATCATCGT GCTTCTGGGG CAGCAGCGGC
GCTTTGCTGT ACTGGATTTT TGCTATCATC TCCTCAAAGT CCAGAAACAT GATGGCAAAG
ATGAAATTAT CAAAAATGTG CCTTTGAAGA AGATGGTGGA GAGAATTCGG AAGTTCCAGA
TTCTCAATGA TGAGATAATC ACTATCTTGG ACAAGTACTT GAAGTCAGGC GACGGAGAGA
GCACGCCTGT GGAGCACGTT CGCTGCTTTC AGCCACCTAT TCACCAATCC CTGGCCAGCA
GCTGAGGACG CGGATGTCCT GCTGTTGAAG AATTCTAGTA CTGACTGCAT TTGAGAACTG
TAAGGGCATG TTTTTCTTTC CATAAACTAT TTAGTGAGAT TTCTAGGGAC TATTTTTCAG
TATCTCTGTG CCTGTTAAAG GGGATGCTTT TCAAACTAAA AGCTTAATTT TATAAAATTG
ACTTATTTTT CTAGACTAAA ATTGTATATG CTTTTGGTAA TTGGAAAGTC TGAGAACATT
GGCTGGTTGC TGACATCATG TTCTTACAAA ATTACTTTCC ATTTTTTTTT CCTATGGAAT
GTTCCAACAG CTAGCTATTT CAGCAAGTGC TGCTGAGTTC ATCCATTTAA CCTTTTATAA
CAATTAGGGA AAGATTTGTG GATTTAAGAA ACTTAATACC AGCTAATTGT GATAAAATCT
GTTACCAATT AGGATTAATT AATGATTAAT TATCTAGCTA TTTGGTTACG GATGTTTCTG
GTTTTTTATG GAAACCTTTT CTAAGTCATT TGTTCCCTTC CCCTTTGTGT GTCAGTGATT
CAGAAAATAG TGAACATGTT TTCGAGGCTT CTACTAAATC CAGTTGTGAC GAAATCTAAT
TTGTGAGGTA TGATTTAAAG GTTACAAAAA TAAAACTAAT GAAACCTGAA AAAAAAAAAA
AAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYFIP1cytoplasmic FMR1-interacting protein 1 isoform a [Homo sapiens]. 8970.0
Contig/Assembly ProteinCYFIP1cytoplasmic FMR1-interacting protein 1 isoform b [Homo sapiens]. 8970.0
Contig/Assembly ProteinCYFIP2cytoplasmic FMR1-interacting protein 2 [Homo sapiens]. 7900.0
Contig/Assembly ProteinCYFIP2cytoplasmic FMR1-interacting protein 2 [Homo sapiens]. 7900.0
Contig/Assembly ProteinCYFIP2cytoplasmic FMR1-interacting protein 2 [Homo sapiens]. 7900.0


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCyfip1cytoplasmic FMR1-interacting protein 1 isoform b [Mus musculus]. 9000.0
Contig/Assembly ProteinCyfip1cytoplasmic FMR1-interacting protein 1 isoform a [Mus musculus]. 9000.0
Contig/Assembly ProteinCyfip1cytoplasmic FMR1-interacting protein 1 isoform a [Mus musculus]. 9000.0
Contig/Assembly ProteinCyfip2cytoplasmic FMR1-interacting protein 2 [Mus musculus]. 7900.0


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC479001PREDICTED: similar to cytoplasmic FMR1 interacting protein 1 [Canis familiaris]. 7970.0
Contig/Assembly ProteinLOC479317PREDICTED: similar to p53 inducible protein [Canis familiaris]. 7900.0


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinCYFIP1cytoplasmic FMR1 interacting protein 1 [Bos taurus]. 8990.0
Contig/Assembly ProteinCYFIP1PREDICTED: cytoplasmic FMR1 interacting protein 1 [Bos taurus]. 8990.0
Contig/Assembly ProteinCYFIP2cytoplasmic FMR1-interacting protein 2 [Bos taurus]. 7900.0
Contig/Assembly ProteinCYFIP2PREDICTED: specifically Rac1-associated protein 1-like [Bos taurus]. 7900.0


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100523290PREDICTED: cytoplasmic FMR1-interacting protein 2-like [Sus scrofa]. 427e-119


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010026G01ADR01_0026_G01.bDB783811 
HTMT10110C08HTMT1_0110_C08.bHX223914 
OVRM10166G04OVRM1_0166_G04.bBP460676 
SPL010016A05SPL01_0016_A05.bBP156791 AK237242
SPL010076B03SPL01_0076_B03.bCJ019828 AK237662
SPLT10009A10SPLT1_0009_A10.bHX239867 
UTR010069E05UTR01_0069_E05.bBP463940 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
923C200.500WSCAC/H
T110.500CAT/H


Alignment:      TOP

20110601C-014312 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPL01_0076_B03.b : ttggctaggactataacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : ..................TTGTTTACCTGACTCTGGACAGCTTCGATGCCATGTTCCGGG
---------+---------+---------+---------+---------+---------+ 42
SPL01_0076_B03.b : xxxxxxxxxxxxxxxxxxTTGTTTACCTGACTCTGGACAGCTTCGATGCCATGTTCCGGG
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : AGGCCAACCACAACGTGTCGGCACCCTATGGGAGGATCACTCTCCACGTCTTCTGGGAGC
---------+---------+---------+---------+---------+---------+ 102
SPL01_0076_B03.b : AGGCCAACCACAACGTGTCGGCACCCTATGGGAGGATCACTCTCCACGTCTTCTGGGAGC
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : TCAACTACGACTTCCTGCCCAACTACTGCTACAATGGCTCCACCAATCGATTTGTTCGGA
---------+---------+---------+---------+---------+---------+ 162
SPL01_0076_B03.b : TCAACTACGACTTCCTGCCCAACTACTGCTACAATGGCTCCACCAATCGATTTGTTCGGA
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CAGTATTACCATTTTCTCAAGAATTTCAAAGGGATAAACAGCCAAATGCACAACCCCAGT
---------+---------+---------+---------+---------+---------+ 222
SPL01_0076_B03.b : CAGTATTACCATTTTCTCAAGAATTTCAAAGGGATAAACAGCCAAATGCACAACCCCAGT
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : ATTTGCATGGATCAAAGGCTTTAAACCTGGCCTATTCGAGCATCTATGGCAGCTACCGGA
---------+---------+---------+---------+---------+---------+ 282
SPL01_0076_B03.b : ATTTGCATGGATCAAAGGCTTTAAACCTGGCCTATTCGAGCATCTATGGCAGCTACCGGA
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : ACTTCGTGGGCCCCCCCCACTTCCAGGTCATCTGCCGGCTGCTTGGCTACCAGGGCATCG
---------+---------+---------+---------+---------+---------+ 342
SPL01_0076_B03.b : ACTTCGTGGGCCCCCCCCACTTCCAGGTCATCTGCCGGCTGCTTGGCTACCAGGGCATCG
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CAGTGGTCATGGAAGAGCTGCTGAAGGTGGTTAAGAGCCTGCTGCAAGGCACCATCCTGC
---------+---------+---------+---------+---------+---------+ 402
SPL01_0076_B03.b : CAGTGGTCATGGAAGAGCTGCTGAAGGTGGTTAAGAGCCTGCTGCAAGGCACCATCCTGC
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : AGTACGTGAAGACGCTGATGGAGGTGATGCCCAAGGTCTGCCGGCTGCCGCGGCACGAGT
---------+---------+---------+---------+---------+---------+ 462
SPL01_0076_B03.b : AGTACGTGAAGACGCTGATGGAGGTGATGCCCAAGGTCTGCCGGCTGCCGCGGCACGAGT
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : ACGGCTCCCCTGGCATCCTGGAGTTCTTCCACCACCAGCTGAAGGACATCGTGGAGTACG
---------+---------+---------+---------+---------+---------+ 522
SPL01_0076_B03.b : ACGGCTCCCCTGGCATCCTGGAGTTCTTCCACCACCAGCTGAAGGACATCGTGGAGTACG
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CGGAGCTGAAGACCGTGTGCTTCCAGAACCTGCGGGAGGTGGGCAATGCCGTCCTCTTCT
---------+---------+---------+---------+---------+---------+ 582
SPL01_0076_B03.b : CGGAGCTGAAGACCGTGTGCTTCCAGAACCTGCGGGAGGTGGGCAATGCCGTCCTCTTCT
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : GCCTGCTCATCGAGCAGAGCCTGTCTTTGGAAGAAGTGTGTGACCTGCTGCATGCAGCCC
---------+---------+---------+---------+---------+---------+ 642
SPL01_0076_B03.b : GCCTGCTCATCGAGCAGAGCCTGTCTTTGGAAGAAGTGTGTGACCTGCTGCATGCAGCCC
ADR01_0026_G01.b : nnggatgaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0009_A10.b : nnttgcgagtagaxxxx
SPL01_0016_A05.b : atxxxxxxxxxxxxxxxxxxxxx
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CGTTCCAGAACATATTGCCGAGAGTCCACGTGAAAGAGGGAGAGAGACTTGATGCCAAAA
---------+---------+---------+---------+---------+---------+ 702
SPL01_0076_B03.b : CGTTCCAGAACATATTGCCGAGAGTCCACGTGAAAGAGGGAGAGAGACTTGATGCCAAAA
ADR01_0026_G01.b : xxxxxxxxxxxxxxTTGCCGAGAGTCCACGTGAAAGAGGGAGAGAGACTTGATGCCAAAA
SPLT1_0009_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGACTTGATGCCAAAA
SPL01_0016_A05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0166_G04.b :
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : TGAAAAGACTAGAATCAAAGTACGCCCCACTTCATCTTGTCCCTCTGATTGAAAGACTGG
---------+---------+---------+---------+---------+---------+ 762
SPL01_0076_B03.b : TGAAAAGACTAGAATCAAAGTACGCCCCACTTCATCTTGTCCCTCTGATTGAAAGACTGG
ADR01_0026_G01.b : TGAAAAGACTAGAATCAAAGTACGCCCCACTTCATCTTGTCCCTCTGATTGAAAGACTGG
SPLT1_0009_A10.b : TGAAAAGACTAGAATCAAAGTACGCCCCACTTCATCTTGTCCCTCTGATTGAAAGACTGG
SPL01_0016_A05.b : xxxxxxGACTAGAATCAAAGTACGCCCCACTTCATCTTGTCCCTCTGATTGAAAGACTGG
OVRM1_0166_G04.b : tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : G*AACCCCTCAGCAAATTGCAATAGCGAGAGAGGGGGAC*CTGCTGACAAAGGAGCGTCT
---------+---------+---------+---------+---------+---------+ 820
SPL01_0076_B03.b : GGAACCCCTCAGCAAATTGCAATAGCGAGAGAGGGGGACCCTGCTGACAAAGGAGCGTCC
ADR01_0026_G01.b : G*AACCCCTCAGCAAATTGCAATAGCGAGAGAGGGGGAC*CTGCTGACAAAGGAGCGTCT
SPLT1_0009_A10.b : G*AACCCCTCAGCAAATTGCAATAGCGAGAGAGGGGGAC*CTGCTGACAAAGGAGCGTCT
SPL01_0016_A05.b : G*AACCCCTCAGCAAATTGCAATAGCGAGAGAGGGGGAC*CTGCTGACAAAGGAGCGTCT
OVRM1_0166_G04.b : xxxxxxxxxxxxxxxxxxxxxATAGCGAGAGAGGGGGAC*CTGCTGACAAAGGAGCGTCT
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CTGCTGTGGCCTGTCCATGTTTGAAGTCATCCTGACTCGGATCCGGACCTTTCTGGATGA
---------+---------+---------+---------+---------+---------+ 880
SPL01_0076_B03.b : CTGCTGTGGgcctgtccatgttttgaagtccatcctgactcggaatccggaacctttctg
ADR01_0026_G01.b : CTGCTGTGGCCTGTCCATGTTTGAAGTCATCCTGACTCGGATCCGGACCTTTCTGGATGA
SPLT1_0009_A10.b : CTGCTGTGGCCTGTCCATGTTTGAAGTCATCCTGACTCGGATCCGGACCTTTCTGGATGA
SPL01_0016_A05.b : CTGCTGTGGCCTGTCCATGTTTGAAGTCATCCTGACTCGGATCCGGACCTTTCTGGATGA
OVRM1_0166_G04.b : CTGCTGTGGCCTGTCCATGTTTGAAGTCATCCTGACTCGGATCCGGACCTTTCTGGATGA
UTR01_0069_E05.b :
HTMT1_0110_C08.b :
20110601C-014312 : CCCCATCTGGCGCGGGCCTCTGCCCAGCAACGGGGTCATGCACGTGGATGACTGCGTCGA
---------+---------+---------+---------+---------+---------+ 940
SPL01_0076_B03.b : ggatgacccccatctgggcgtgggggctcttggccaagcaaacgggggtcatggcacttg
ADR01_0026_G01.b : CCCCATCTGGCGCGGGCCTCTGCCCAGCAACGGGGTCATGCATGTGGATGACTGTGTCGA
SPLT1_0009_A10.b : CCCCATCTGGCGCGGGCCTCTGCCCAGCAACGGGGTCATGCACGTGGATGACTGCGTCGA
SPL01_0016_A05.b : CCCCATCTGGCGTGGGCCTCTGCCCAGCAACGGGGTCATGCACGTGGATGACTGCGTCGA
OVRM1_0166_G04.b : CCCCATCTGGCGCGGGCCTCTGCCCAGCAACGGGGTCATGCATGTGGATGACTGCGTCGA
UTR01_0069_E05.b : catt
HTMT1_0110_C08.b :
20110601C-014312 : GTTTCACAGGCTGTGGAGCGCCATGCAGTTTGTCTACTGCATTCCCGTGGGGACACATGA
---------+---------+---------+---------+---------+---------+ 1000
SPL01_0076_B03.b : gaatgaactggcgtccaagttttcccaaggcttgttggaaccccccatgccagntttgtt
ADR01_0026_G01.b : GTTTCACAGGCTGTGGAGCGCCATGCAGTTTGTCTACTGCATTCCCGTGGGGACACATGA
SPLT1_0009_A10.b : GTTTCACAGGCTGTGGAGCGCCATGCAGTTTGTCTACTGCATTCCCGTGGGGACACATGA
SPL01_0016_A05.b : GTTTCACAGGCTGTGGAGCGCCATGCAGTTTGTCTACTGCATTCCCGTGGGGACACATGA
OVRM1_0166_G04.b : GTTTCACAGGCTGTGGAGCGCCATGCAGTTTGTCTACTGCATTCCCGTGGGGACACATGA
UTR01_0069_E05.b : agtgagtactagxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
HTMT1_0110_C08.b :
20110601C-014312 : GTTTACGGTCGAACAGTGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCATCGT
---------+---------+---------+---------+---------+---------+ 1060
SPL01_0076_B03.b : ctaccgggcatttccccggggggggaacaccttgaatttttcaggggttgtaaccatggt
ADR01_0026_G01.b : GTTTACGGTCGAACAGTGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCATCGT
SPLT1_0009_A10.b : GTTTACGGTCGAACAGTGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCATCGT
SPL01_0016_A05.b : GTTTACGGTTGAACAGTGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCATCGT
OVRM1_0166_G04.b : GTTTACGGTCGAACAGTGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCATCGT
UTR01_0069_E05.b : xxxxxxxxxxxxxxxxxGTTTTGGCGACGGGCTCCACTGGGCTGGCTGCATGATCACCGT
HTMT1_0110_C08.b :
20110601C-014312 : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGATTTTTGCTATCATCTCCTCAAAGT
---------+---------+---------+---------+---------+---------+ 1120
SPL01_0076_B03.b : tttttgggcgaacgggtcctccaatctgggggtg
ADR01_0026_G01.b : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGATTTTTGCTATCATCTCCTCAAAGT
SPLT1_0009_A10.b : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGATTTTTGCTATCATCTCCTCAAAGT
SPL01_0016_A05.b : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGACTTTTGCTATCATCTCCTCAAAGT
OVRM1_0166_G04.b : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGATTTTTGCTATCATCTCCTCAAAGT
UTR01_0069_E05.b : GCTTCTGGGGCAGCAGCGGCGCTTTGCTGTACTGGATTTTTGCTATCATCTCCTCAAAGT
HTMT1_0110_C08.b :
20110601C-014312 : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
---------+---------+---------+---------+---------+---------+ 1180
SPL01_0076_B03.b :
ADR01_0026_G01.b : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
SPLT1_0009_A10.b : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
SPL01_0016_A05.b : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
OVRM1_0166_G04.b : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
UTR01_0069_E05.b : CCAGAAACATGATGGCAAAGATGAAATTATCAAAAATGTGCCTTTGAAGAAGATGGTGGA
HTMT1_0110_C08.b : tttg
20110601C-014312 : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAATCACTATCTTGGACAAGTACTT
---------+---------+---------+---------+---------+---------+ 1240
SPL01_0076_B03.b :
ADR01_0026_G01.b : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAATCACTATCTTGGACAAGTACTT
SPLT1_0009_A10.b : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAATCACTATCTTGGACAAGTACTT
SPL01_0016_A05.b : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAATCACTATCTTGGACAAGTACTT
OVRM1_0166_G04.b : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAATCACTATCTTGGACAAGTACTT
UTR01_0069_E05.b : GAGAATTCGGAAGTTCCAGATTCTCAATGATGAGATAACCACTATCTTGGACAAGTACTT
HTMT1_0110_C08.b : ggacagtacgcggcagtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTACTT
20110601C-014312 : GAAGTCAGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
---------+---------+---------+---------+---------+---------+ 1300
SPL01_0076_B03.b :
ADR01_0026_G01.b : GAAGTCGGGCGATGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
SPLT1_0009_A10.b : GAAGTCAGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
SPL01_0016_A05.b : GAAGTCAGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
OVRM1_0166_G04.b : GAAGTCGGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
UTR01_0069_E05.b : GAAGTCAGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
HTMT1_0110_C08.b : GACGTCAGGCGACGGAGAGAGCACGCCTGTGGAGCACGTTCGCTGCTTTCAGCCACCTAT
20110601C-014312 : TCACCAATCCCTGGCCAGCAGCTGAGGACGCGGATGTCCTGCTGTTGAAGAATTCTAGTA
---------+---------+---------+---------+---------+---------+ 1360
SPL01_0076_B03.b :
ADR01_0026_G01.b : TCNACCATCCCTGGCCAGCAGCTGAAGAACGCGATGTCCTGTTGNTGAAGAATTCCAGTA
SPLT1_0009_A10.b : TCACCAATCCCTGGCCAGCAGCTGAGGACGCGGATGTCCTGCTGTTGAAGAATTCTAGTA
SPL01_0016_A05.b : TCACCAATCCCTGGCCAGCAGCTGAGGACGCGGATGTCCTGCTGTTGAAGAATTCTAGTA
OVRM1_0166_G04.b : TCACCAATCCCTGGCCAGCATCTGAGGACGCGGATGTCCTGTTGTTGAAGAATTCCAGTA
UTR01_0069_E05.b : TCACCAATCCCTGGCCAGCAGCTGAGGACGCGGATGTCCTGCTGTTGAAGAATTCTAGTA
HTMT1_0110_C08.b : TCACCAATCCCTGGCCAGCAGCTGAGGACGCGGATGTCCTGCTGTTGAAGAATTCTAGTA
20110601C-014312 : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAGTGAGAT
---------+---------+---------+---------+---------+---------+ 1420
SPL01_0076_B03.b :
ADR01_0026_G01.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAATGAGAT
SPLT1_0009_A10.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAGTGAGAT
SPL01_0016_A05.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAGTGAGAT
OVRM1_0166_G04.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTACTTATTGAGAT
UTR01_0069_E05.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAGTGAGAT
HTMT1_0110_C08.b : CTGACTGCATTTGAGAACTGTAAGGGCATGTTTTTCTTTCCATAAACTATTTAGTGAGAT
20110601C-014312 : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGGGGATGCTTTTCAAACTAAA
---------+---------+---------+---------+---------+---------+ 1480
SPL01_0076_B03.b :
ADR01_0026_G01.b : TTCTAGGGACTATTTTTCANTATCTCTGTGCCTGTAAAAGGGGA*GCTTTTCAAACTAAA
SPLT1_0009_A10.b : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGGGGATGCTTTTCAAACTAAA
SPL01_0016_A05.b : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGGGGATGCTTTTCAAACTAAA
OVRM1_0166_G04.b : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGG*GATGCTTTTCTAACTAAA
UTR01_0069_E05.b : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGGGGATGCTTTTTAAACTAAA
HTMT1_0110_C08.b : TTCTAGGGACTATTTTTCAGTATCTCTGTGCCTGTTAAAGGGGATGCTTTTCAAACTAAA
20110601C-014312 : AGCTTAATTTTATAAAATTGACTTATTTTTCTAGACTAAAATTGTATATGCTTTTGGTAA
---------+---------+---------+---------+---------+---------+ 1540
SPL01_0076_B03.b :
ADR01_0026_G01.b : AGCctaatttttaaaaaatgaacttatttttcagaccaaaaatggaaaagcttttgggaa
SPLT1_0009_A10.b : AGCTTAATTTTATAAAATtgacttatttttctaaactaaaattgtatatgcttttggtaa
SPL01_0016_A05.b : AGCTTAATTTTATaaaat
OVRM1_0166_G04.b : AGCTTTATTTTATtan
UTR01_0069_E05.b : AGCTTAATTTTATAAAATTGACTTATTTTTCTAGACTAAAATTGTATATGCTTTTGGTAA
HTMT1_0110_C08.b : AGCTTAATTTTATAAAATTGACTTATTTTTCTAGACTAAAATTGTATATGCTTTTGGTAA
20110601C-014312 : TTGGAAAGTCTGAGAACATTGGCTGGTTGCTGACATCATGTTCTTACAAAATTACTTTCC
---------+---------+---------+---------+---------+---------+ 1600
SPL01_0076_B03.b :
ADR01_0026_G01.b : ttgggaaacccgaaaaaaatgggctgggtgccgaaatccaggttcttacaaaataccttt
SPLT1_0009_A10.b : ttggaaagtctgagaaccttggctggttgccgacatcaggttcttacaaaattcttttcc
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : TTGGAAAGTCTGAGAACATTGGCTGGTTGCTGACATCATGTTCTTACAAAATTACTTTCC
HTMT1_0110_C08.b : TTGGAAAGTCTGAGAACATTGGCTGGTTGCTGACATCATGTTCTTACAAAATTACTTTCC
20110601C-014312 : ATTTTTTTTTCCTATGGAATGTTCCAACAGCTAGCTATTTCAGCAAGTGCTGCTGAGTTC
---------+---------+---------+---------+---------+---------+ 1660
SPL01_0076_B03.b :
ADR01_0026_G01.b : ccattttttttccaagggaaagttcccacacctacctatttccccaggggccgctgaatt
SPLT1_0009_A10.b : tttttttttccaagggaggttcccacagctacctatttcagccagtgctgctgaattcat
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : ATTTTTTTTTCCTATGGAATGTTCCAACAGCTAGCTATTTCAGCAAGTGCTGCTGAGTTC
HTMT1_0110_C08.b : ATTTTTTTTTCCTATGGAATGTTCCAACAGCTAGCTATTTCAGCAAGTGCTGCTGAGTTC
20110601C-014312 : ATCCATTTAACCTTTTATAACAATTAGGGAAAGATTTGTGGATTTAAGAAACTTAATACC
---------+---------+---------+---------+---------+---------+ 1720
SPL01_0076_B03.b :
ADR01_0026_G01.b : cccccctttaacctttaaaaaaattggggaaaaatttggggacttaaaaattttaaaccc
SPLT1_0009_A10.b : ccctttaacctttttaaacatttagggaaaatttttgggatttaaaaaatttaatccccc
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : ATCCATTTAACCTTTTATAACAATTAGGGAAAGATTTGTGGATTTAAGAAACTTAATACC
HTMT1_0110_C08.b : ATCCATTTAACCTTTTATAACAATTAGGGAAAGATTTGTGGATTTAAGAAACTTAATACC
20110601C-014312 : *AGCTAATTGTGATAAAA*TCTGTTACCAATTAGGATTAATTAATGATTAATTATCTAGC
---------+---------+---------+---------+---------+---------+ 1778
SPL01_0076_B03.b :
ADR01_0026_G01.b : cctatttgggaaaaattcgtttccccttgggattatttagggttattttccccccttttg
SPLT1_0009_A10.b : tcaatttggaaaaattcgtgttccaattgggattaatttagggataattttcccaccttt
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : CAGCTAATTGTGATAAAAATCTGTTACCAATTAAGATTAATTAATGATTAATTATCTAGC
HTMT1_0110_C08.b : *AGCTAATTGTGATAAAA*TCTGTTACCAATTAGGATTAATTAATGATTAATTATCTAGC
20110601C-014312 : TATTTGGTTACGGATGTTTCTGGTTTTTT*ATGGAAACCTTTTCTAAGTCATTTGTTCCC
---------+---------+---------+---------+---------+---------+ 1837
SPL01_0076_B03.b :
ADR01_0026_G01.b : gttacggagtttttggttttttaggaaactttttcaaacctttgttcctccccctttggg
SPLT1_0009_A10.b : ttgttaccggaattttttggttttttaggaacactttttaaaaacattttttccctctcc
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : TATTTGGTTACCGATGTTTCTGGTTTTTTTATGGAAACCTTTTCTAAGTCATTTTTTCCC
HTMT1_0110_C08.b : TATTTGGTTACGGATGTTTCTGGTTTTTT*ATGGAAACCTTTTCTAAGTCATTTGTTCCC
20110601C-014312 : TT*CCCCTTTGTGTGTCAGTGATTCAGAAAATAGTGAACATGTTTTCGAGGCTTCTACTA
---------+---------+---------+---------+---------+---------+ 1896
SPL01_0076_B03.b :
ADR01_0026_G01.b : gcccgggtctaaaaaaaaggaaggtttttcggggtcctcacaaaaccgttgggaaaaact
SPLT1_0009_A10.b : ccttgtgggggcgggttccaaaaaatatggactgttttttaaggctttctacaaacccgt
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : TTCCCCCTTTGTGTGTCAGTGATTCCAAAAATAGTGAACATGTTTTCGAGGCTTCTACTA
HTMT1_0110_C08.b : TT*CCCCTTTGTGTGTCAGTGATTCAGAAAATAGTGAACATGTTTTCGAGGCTTCTACTA
20110601C-014312 : AATCCAGTTGTGACGAAATCTAATTTGTGAGGTATGATTTAAAGGTTACAAAAATAAAAC
---------+---------+---------+---------+---------+---------+ 1956
SPL01_0076_B03.b :
ADR01_0026_G01.b : ttttggggggggattttagggttaaaaaacaacatggacgcgaaaaaaaaaaaaaggggg
SPLT1_0009_A10.b : tttggagaaaactattttgggaggttgtattaaggggcccaaaaataactttggcca
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : AA*CCCGTTGTGACAAAATCTAATTTTGGAGGTATGATTTAAAGGTTACAAAATAAAAAC
HTMT1_0110_C08.b : AATCCAGTTGTGACGAAATCTAATTTGTGAGGTATGATTTAAAGGTTACAAAAATAAAAC
20110601C-014312 : TAATGAAACCTGAAAAAAAAAAAAAAA.................................
---------+---------+---------+---------+---------+---------+ 1983
SPL01_0076_B03.b :
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : TAATGAAACCCGAAAAAAAAAAAAAAAaaaggcccttgggctccaactgcagggcccggc
HTMT1_0110_C08.b : TAATGAAACCTGAAAAAAAAAAAAAAA
20110601C-014312 : ............................................................
---------+---------+---------+---------+---------+---------+ 1983
SPL01_0076_B03.b :
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : cccccctaaataaccccccgggggggcccaaccttaacccctccccccccttttcttttg
HTMT1_0110_C08.b :
20110601C-014312 : ............................................................
---------+---------+---------+---------+---------+---------+ 1983
SPL01_0076_B03.b :
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : aaaaaagggggcccccttaaaaggaagtcccaaattaaaaaacccaaggcccccggggcc
HTMT1_0110_C08.b :
20110601C-014312 : ............................................................
---------+---------+---------+---------+---------+---------+ 1983
SPL01_0076_B03.b :
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : ctcccctttttttcccccgcccccgtgggaccgggggaaaaaaaaccgcctcctacgctt
HTMT1_0110_C08.b :
20110601C-014312 : ............................................................
---------+---------+---------+---------+---------+---------+ 1983
SPL01_0076_B03.b :
ADR01_0026_G01.b :
SPLT1_0009_A10.b :
SPL01_0016_A05.b :
OVRM1_0166_G04.b :
UTR01_0069_E05.b : gtggggaaaaattttttttttgtggtaaaagagaaaaaaacccccttttcctcctttc
HTMT1_0110_C08.b :