Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-014331

Sequence: [FASTA format sequence] AAGCAGAGTT GGCGGGGAGA GAGAAGGTGA CTGCGGTGTG CGTGCTGGAC GTTAATACAC GTACTCATGG CGAACACTAA AAACTCAGTG GATTCAAAAT CCATTAAAAC TTTGGAGACA AAGATCTTAC ATGGAAGCAA ATCAGTGGAC TCTGGAATAT CCTTGGATGT CAGTTACAAA ATGGATTATC CTGAAATGGG TTTATGTATA ATAATTAATA ATAAGAACTT TGATAAAAAT ACCGGAATGG CATGTCGATC TGGTACAGAT GTGGATGCTG CAAATCTCAG GGAGACCTTC ACAAACTTGA AATATGAAGT CAGGAATAAA AATGATCTTA CACGTGAAGA AATTTTGGAG TTAATGCACA GTGTTTCTAA AGAAGACCAT AGTAAAAGGA GCAGTTTTAT TTGCGTGCTT CTAAGCCATG GTGAAGAAGG AAAAATTTTT GGAACAAATG GACCTGTTGA TCTGAAAAAA TTAACAAGTT TCTTCAGAGG GGACTGTTGT AGAACTCTAA CTGGCAAACC CAAACTTTTC ATAATTCAGG CCTGCCGAGG CACAGAATTG GACTGTGGGA TTGAGACGGA CAGTGGGACT GAAGATGACA TGGCGTGTCA GAAAATACCA GTTGAGGCAG ACTTCTTGTA TGCATATTCT ACAGCGCCTG GTTACTATTC CTGGCGAATT CCAAGGACGG ATCCTGGTTC ATCCAGTCAC TTTGTGCAGC GCTGAAACAG TACGCTCACA AGCTTGAGCT TATGCACATT CTTACTCGGG TTAACCCGAA GGTAGCAGTA GAATTCGAGT CCTTTTCTAC TGACTCTACT TTTCATGCCA AGAAACAGAT TCCATGTATT GTGTCCATGC TCACAAAGAA CTCTATTTTT TTATCACCAA AAAATGAATG ATTTGGGGTT GTTTTTTTTA ATTGNATGGG AAAGGAGAAA TGGTTAACCG ATACTATATT TCCTCCCCAT TTAAACCAAC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
CASP3 caspase-3 preproprotein [Homo sapiens]. 376 e-104 O

CASP3 caspase-3 preproprotein [Homo sapiens]. 376 e-104 O

CASP7 caspase-7 isoform alpha precursor [Homo sapiens]. 204 1e-52

CASP7 caspase-7 isoform alpha [Homo sapiens]. 204 1e-52

CASP7 caspase-7 isoform delta [Homo sapiens]. 204 1e-52

CASP6 caspase-6 isoform alpha preproprotein [Homo sapiens]. 136 2e-44 O

CASP8 caspase-8 isoform B precursor [Homo sapiens]. 123 9e-33

CASP8 caspase-8 isoform C precursor [Homo sapiens]. 123 9e-33

CASP8 caspase-8 isoform G precursor [Homo sapiens]. 123 9e-33

CASP8 caspase-8 isoform A precursor [Homo sapiens]. 123 9e-33

Locus	Definition	Score	E value	FL
CASP3	caspase-3 preproprotein [Homo sapiens].	376	e-104	O
CASP3	caspase-3 preproprotein [Homo sapiens].	376	e-104	O
CASP7	caspase-7 isoform alpha precursor [Homo sapiens].	204	1e-52
CASP7	caspase-7 isoform alpha [Homo sapiens].	204	1e-52
CASP7	caspase-7 isoform delta [Homo sapiens].	204	1e-52
CASP6	caspase-6 isoform alpha preproprotein [Homo sapiens].	136	2e-44	O
CASP8	caspase-8 isoform B precursor [Homo sapiens].	123	9e-33
CASP8	caspase-8 isoform C precursor [Homo sapiens].	123	9e-33
CASP8	caspase-8 isoform G precursor [Homo sapiens].	123	9e-33
CASP8	caspase-8 isoform A precursor [Homo sapiens].	123	9e-33

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Casp3 caspase-3 [Mus musculus]. 365 e-101 O

Casp7 caspase-7 precursor [Mus musculus]. 212 3e-55

Casp6 caspase-6 precursor [Mus musculus]. 138 1e-44 O

Casp8 caspase-8 precursor [Mus musculus]. 128 6e-30

Casp8 caspase-8 precursor [Mus musculus]. 128 6e-30

Casp9 caspase-9 [Mus musculus]. 124 9e-29

Casp2 caspase-2 [Mus musculus]. 92 4e-23

Casp14 caspase-14 precursor [Mus musculus]. 82 6e-16 O

Casp12 caspase-12 precursor [Mus musculus]. 79.3 4e-15

Casp1 caspase-1 [Mus musculus]. 66.2 1e-12

Locus	Definition	Score	E value	FL
Casp3	caspase-3 [Mus musculus].	365	e-101	O
Casp7	caspase-7 precursor [Mus musculus].	212	3e-55
Casp6	caspase-6 precursor [Mus musculus].	138	1e-44	O
Casp8	caspase-8 precursor [Mus musculus].	128	6e-30
Casp8	caspase-8 precursor [Mus musculus].	128	6e-30
Casp9	caspase-9 [Mus musculus].	124	9e-29
Casp2	caspase-2 [Mus musculus].	92	4e-23
Casp14	caspase-14 precursor [Mus musculus].	82	6e-16	O
Casp12	caspase-12 precursor [Mus musculus].	79.3	4e-15
Casp1	caspase-1 [Mus musculus].	66.2	1e-12

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
CASP3 caspase-3 precursor [Canis lupus familiaris]. 377 e-104 O

LOC486896 PREDICTED: similar to caspase 7 isoform delta [Canis familiaris]. 209 4e-54

LOC487899 PREDICTED: similar to caspase 6 isoform alpha preproprotein [Canis familiaris]. 134 5e-43 O

CASP8 caspase-8 [Canis lupus familiaris]. 129 6e-35

CASP9 PREDICTED: caspase 9, apoptosis-related cysteine protease isoform 2 [Canis familiaris]. 121 1e-27

CASP9 caspase-9 [Canis lupus familiaris]. 121 1e-27

CASP9 PREDICTED: caspase 9, apoptosis-related cysteine protease isoform 3 [Canis familiaris]. 121 1e-27

LOC488472 PREDICTED: similar to caspase 10 isoform a preproprotein [Canis familiaris]. 95.1 4e-25

CASP2 caspase-2 [Canis lupus familiaris]. 90.5 2e-22

LOC610460 PREDICTED: similar to Caspase-14 precursor (CASP-14) [Canis familiaris]. 82.8 5e-16 O

Locus	Definition	Score	E value	FL
CASP3	caspase-3 precursor [Canis lupus familiaris].	377	e-104	O
LOC486896	PREDICTED: similar to caspase 7 isoform delta [Canis familiaris].	209	4e-54
LOC487899	PREDICTED: similar to caspase 6 isoform alpha preproprotein [Canis familiaris].	134	5e-43	O
CASP8	caspase-8 [Canis lupus familiaris].	129	6e-35
CASP9	PREDICTED: caspase 9, apoptosis-related cysteine protease isoform 2 [Canis familiaris].	121	1e-27
CASP9	caspase-9 [Canis lupus familiaris].	121	1e-27
CASP9	PREDICTED: caspase 9, apoptosis-related cysteine protease isoform 3 [Canis familiaris].	121	1e-27
LOC488472	PREDICTED: similar to caspase 10 isoform a preproprotein [Canis familiaris].	95.1	4e-25
CASP2	caspase-2 [Canis lupus familiaris].	90.5	2e-22
LOC610460	PREDICTED: similar to Caspase-14 precursor (CASP-14) [Canis familiaris].	82.8	5e-16	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
CASP3 caspase-3 precursor [Bos taurus]. 377 e-105 O

CASP7 PREDICTED: caspase 7-like [Bos taurus]. 208 7e-54 O

CASP7 PREDICTED: caspase 7 [Bos taurus]. 208 7e-54 O

CASP6 caspase-6 precursor [Bos taurus]. 134 1e-43 O

CASP9 caspase-9 [Bos taurus]. 132 6e-31

CASP9 PREDICTED: caspase 9, apoptosis-related cysteine peptidase [Bos taurus]. 132 6e-31

CASP8 caspase-8 [Bos taurus]. 125 5e-33

CASP2 caspase-2 [Bos taurus]. 89.7 2e-22

CFLAR CASP8 and FADD-like apoptosis regulator [Bos taurus]. 75.1 9e-14

CASP14 caspase-14 [Bos taurus]. 73.6 3e-13 O

Locus	Definition	Score	E value	FL
CASP3	caspase-3 precursor [Bos taurus].	377	e-105	O
CASP7	PREDICTED: caspase 7-like [Bos taurus].	208	7e-54	O
CASP7	PREDICTED: caspase 7 [Bos taurus].	208	7e-54	O
CASP6	caspase-6 precursor [Bos taurus].	134	1e-43	O
CASP9	caspase-9 [Bos taurus].	132	6e-31
CASP9	PREDICTED: caspase 9, apoptosis-related cysteine peptidase [Bos taurus].	132	6e-31
CASP8	caspase-8 [Bos taurus].	125	5e-33
CASP2	caspase-2 [Bos taurus].	89.7	2e-22
CFLAR	CASP8 and FADD-like apoptosis regulator [Bos taurus].	75.1	9e-14
CASP14	caspase-14 [Bos taurus].	73.6	3e-13	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
CASP3 caspase-3 precursor [Sus scrofa]. 417 e-117 O

CASP8 caspase-8 [Sus scrofa]. 127 8e-35

LOC100518913 PREDICTED: caspase-9-like isoform 1 [Sus scrofa]. 118 4e-27

LOC100518913 PREDICTED: caspase-9-like isoform 2 [Sus scrofa]. 118 4e-27

LOC100517293 PREDICTED: caspase-6-like [Sus scrofa]. 108 3e-35 O

CASP10 caspase-10 [Sus scrofa]. 106 2e-27

LOC100624904 PREDICTED: caspase-8-like [Sus scrofa]. 100 8e-27

LOC100521118 PREDICTED: caspase-2-like isoform 1 [Sus scrofa]. 90.5 3e-23

LOC100518472 PREDICTED: caspase-14-like [Sus scrofa]. 79.7 2e-15 O

LOC641352 caspase-15 [Sus scrofa]. 74.3 1e-13

Locus	Definition	Score	E value	FL
CASP3	caspase-3 precursor [Sus scrofa].	417	e-117	O
CASP8	caspase-8 [Sus scrofa].	127	8e-35
LOC100518913	PREDICTED: caspase-9-like isoform 1 [Sus scrofa].	118	4e-27
LOC100518913	PREDICTED: caspase-9-like isoform 2 [Sus scrofa].	118	4e-27
LOC100517293	PREDICTED: caspase-6-like [Sus scrofa].	108	3e-35	O
CASP10	caspase-10 [Sus scrofa].	106	2e-27
LOC100624904	PREDICTED: caspase-8-like [Sus scrofa].	100	8e-27
LOC100521118	PREDICTED: caspase-2-like isoform 1 [Sus scrofa].	90.5	3e-23
LOC100518472	PREDICTED: caspase-14-like [Sus scrofa].	79.7	2e-15	O
LOC641352	caspase-15 [Sus scrofa].	74.3	1e-13

Assembly Members: 7 TOP

Library Plate Loc. Read Name Accession Full Seq.

AMP01 0002 G08 AMP01_0002_G08.b BW955111 AK230496
AMP01 0064 H11 AMP01_0064_H11.b BW959681 AK389767
AMP01 0068 D01 AMP01_0068_D01.b BW959919
DCI01 0004 E05 DCI01_0004_E05.b DB790855
DCI01 0012 D10 DCI01_0012_D10.b DB791371
DCI01 0046 C06 DCI01_0046_C06.b DB794275
DCI01 0084 B01 DCI01_0084_B01.b DB796990

SNPs: 3 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
65 C 3 0 0.429 W N CCC/P
T 4 0 0.571 CTC/L
393 C 3 0 0.429 W S AGC/S
T 4 0 0.571 AGT/S
689 A 2 0 0.500 W N AAT/N
T 2 0 0.500 ATT/I

Alignment: TOP

20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0064_H11.b : nggagagannttaagcgaatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0002_G08.b :     gtatgtatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0068_D01.b :      naagataantattattcgatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0084_B01.b :             nntttacgtaacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0046_C06.b :              nnnaatcgtaacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0012_D10.b :                  nnaaacgatactaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0004_E05.b :                     atccccatggggtatcttxxxxxxxxxxxxxxxxxxxxxx


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
AMP01_0064_H11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0002_G08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0068_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0084_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0046_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0012_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0004_E05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014331 : ................................................AAGCAGAGTTGG
                   ---------+---------+---------+---------+---------+---------+ 12
AMP01_0064_H11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGCAGAGTTGG
AMP01_0002_G08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGTTGG
AMP01_0068_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGTTGG
DCI01_0084_B01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGTTGG
DCI01_0046_C06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGTTGG
DCI01_0012_D10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTGG
DCI01_0004_E05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014331 : CGGGGAGAGAGAAGGTGACTGCGGTGTGCGTGCTGGACGTTAATACACGTACTCATGGCG
                   ---------+---------+---------+---------+---------+---------+ 72
AMP01_0064_H11.b : CGGGGAGAGAGAAGGTGACTGCGGTGTGCGTGCTGGACGTTAATACACGTACTCATGGCG
AMP01_0002_G08.b : CGGGGAGAGAGAAGGTGACTGCGGTGTGCGTGCTGGACGTTAATACACGTACTCGTGGCG
AMP01_0068_D01.b : CGGGGAGAGAGAAGGTGACTGCGGTGTGCGTGCTGGACGTTAATACACGTACTCATGGCG
DCI01_0084_B01.b : CGGGGAGAGAGAAGGTGACTGTGGTGTGCGTGCTGGACGTTAATACACGTACCCATGGCG
DCI01_0046_C06.b : CGGGGAGAGAGAAGGTGACTGTGGTGTGCGTGCTGGACGTTAATACACGTACCCATGGCG
DCI01_0012_D10.b : CGGGGAGAGAGAAGGTGACTGCGGTGTGCGTGCTGGACGTTAATACACGTACTCATGGCG
DCI01_0004_E05.b : xxxxxAGAGAGAAGGTGACTGTGGTGTGCGTGCTGGACGTTAATACACGTACCCATGGCG


20110601C-014331 : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
                   ---------+---------+---------+---------+---------+---------+ 132
AMP01_0064_H11.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
AMP01_0002_G08.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
AMP01_0068_D01.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
DCI01_0084_B01.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
DCI01_0046_C06.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
DCI01_0012_D10.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT
DCI01_0004_E05.b : AACACTAAAAACTCAGTGGATTCAAAATCCATTAAAACTTTGGAGACAAAGATCTTACAT


20110601C-014331 : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
                   ---------+---------+---------+---------+---------+---------+ 192
AMP01_0064_H11.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
AMP01_0002_G08.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
AMP01_0068_D01.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
DCI01_0084_B01.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
DCI01_0046_C06.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
DCI01_0012_D10.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT
DCI01_0004_E05.b : GGAAGCAAATCAGTGGACTCTGGAATATCCTTGGATGTCAGTTACAAAATGGATTATCCT


20110601C-014331 : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
                   ---------+---------+---------+---------+---------+---------+ 252
AMP01_0064_H11.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
AMP01_0002_G08.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
AMP01_0068_D01.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
DCI01_0084_B01.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
DCI01_0046_C06.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA
DCI01_0012_D10.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAA*TACCGGAATGGCA
DCI01_0004_E05.b : GAAATGGGTTTATGTATAATAATTAATAATAAGAACTTTGATAAAAATACCGGAATGGCA


20110601C-014331 : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
                   ---------+---------+---------+---------+---------+---------+ 312
AMP01_0064_H11.b : TGTCGATCTGGTGCAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
AMP01_0002_G08.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
AMP01_0068_D01.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
DCI01_0084_B01.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
DCI01_0046_C06.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
DCI01_0012_D10.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCACAAACTTGAAA
DCI01_0004_E05.b : TGTCGATCTGGTACAGATGTGGATGCTGCAAATCTCAGGGAGACCTTCGCAAACTTGAAA


20110601C-014331 : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
                   ---------+---------+---------+---------+---------+---------+ 372
AMP01_0064_H11.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
AMP01_0002_G08.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCGCAGT
AMP01_0068_D01.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
DCI01_0084_B01.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
DCI01_0046_C06.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
DCI01_0012_D10.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT
DCI01_0004_E05.b : TATGAAGTCAGGAATAAAAATGATCTTACACGTGAAGAAATTTTGGAGTTAATGCACAGT


20110601C-014331 : GTTTCTAAAGAAGACCATAGTAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
                   ---------+---------+---------+---------+---------+---------+ 432
AMP01_0064_H11.b : GTTTCTAAAGAAGACCATAGTAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
AMP01_0002_G08.b : GTTTCTAAAGAAGACCATAGTAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
AMP01_0068_D01.b : GTTTCTAAAGAAGACCATAGTAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
DCI01_0084_B01.b : GTTTCTAAAGAAGACCATAGCAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
DCI01_0046_C06.b : GTTTCTAAAGAAGACCATAGCAGAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
DCI01_0012_D10.b : GTTTCTAAAGAAGACCATAGTAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT
DCI01_0004_E05.b : GTTTCTAAAGAAGACCATAGCAAAAGGAGCAGTTTTATTTGCGTGCTTCTAAGCCATGGT


20110601C-014331 : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
                   ---------+---------+---------+---------+---------+---------+ 492
AMP01_0064_H11.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
AMP01_0002_G08.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
AMP01_0068_D01.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
DCI01_0084_B01.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
DCI01_0046_C06.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
DCI01_0012_D10.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC
DCI01_0004_E05.b : GAAGAAGGAAAAATTTTTGGAACAAATGGACCTGTTGATCTGAAAAAATTAACAAGTTTC


20110601C-014331 : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC
                   ---------+---------+---------+---------+---------+---------+ 552
AMP01_0064_H11.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC
AMP01_0002_G08.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC
AMP01_0068_D01.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCTAACTTTTCANTATTCAGGCC
DCI01_0084_B01.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC
DCI01_0046_C06.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC
DCI01_0012_D10.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATGATTCAGGCC
DCI01_0004_E05.b : TTCAGAGGGGACTGTTGTAGAACTCTAACTGGCAAACCCAAACTTTTCATAATTCAGGCC


20110601C-014331 : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
                   ---------+---------+---------+---------+---------+---------+ 612
AMP01_0064_H11.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
AMP01_0002_G08.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
AMP01_0068_D01.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
DCI01_0084_B01.b : CGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
DCI01_0046_C06.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
DCI01_0012_D10.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG
DCI01_0004_E05.b : TGCCGAGGCACAGAATTGGACTGTGGGATTGAGACGGACAGTGGGACTGAAGATGACATG


20110601C-014331 : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
                   ---------+---------+---------+---------+---------+---------+ 672
AMP01_0064_H11.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
AMP01_0002_G08.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTAC         
AMP01_0068_D01.b : GCGTGTCAAANNATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
DCI01_0084_B01.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
DCI01_0046_C06.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
DCI01_0012_D10.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT
DCI01_0004_E05.b : GCGTGTCAGAAAATACCAGTTGAGGCAGACTTCTTGTATGCATATTCTACAGCGCCTGGT


20110601C-014331 : TACTATTCCTGG*CGAATTCCAAGGACGGATCCTGGTTCATCCAGTCACTTTGTGCAGCG
                   ---------+---------+---------+---------+---------+---------+ 731
AMP01_0064_H11.b : TACTATTCCTGG*CGAAATTCNAGGACGGATCCCTGGTCATCCAGTCACTTTGTGCAGCG
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : TACTATTCCTGGNCGAATTTCAAGGACGGATCCTGGTTCATCCAGTCACTTTGTGCAGCG
DCI01_0084_B01.b : TACTATTCCTGG*CGAAATTCAAGGACGGATCCTGGTTCATCCAGTCACTTTGTGCAGCG
DCI01_0046_C06.b : TACTATTCCTGGCGAAATTCAAAGGACGGATCCTGGTTCATCCAGTCACTTTGTGCAGCG
DCI01_0012_D10.b : TACTATTCCTGG*CGAAATTCAAAGACGGATCCTGGTTCATCCAGTCACTTgtgcagcgc
DCI01_0004_E05.b : TACTATTCCTGGCGAAATTCAAAGGACGGATCCTGGTTCATCCAGTCACTTTGTGCAGCG


20110601C-014331 : CTGAAACAGTACGCTCACAAGCTTGAGCTTATGCACATTCTTACTCGGGTTAACCCGAAG
                   ---------+---------+---------+---------+---------+---------+ 791
AMP01_0064_H11.b : CTGAAACAGTACGCTCANCAGCTTGAGCTTATGCACATTCTTACTCGGGTAA*CCCGAAA
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : CTGAAACAGTACGCTCACAAGCCTGAAGCTATGCACATTCTTACTCGGGTTA*CCCGAAG
DCI01_0084_B01.b : CTGAAACAGTACGCTCACAAGCTTGAGCTTATGCACATTCTTACTCGGGTTAACC*GAAG
DCI01_0046_C06.b : CTGAAACAGTACGCTCANCAGCTTGAGCTTATGCACATTCTTACTCGGGTTAACCCGAAG
DCI01_0012_D10.b : tgaacagtacgctcacaacctgagcctatgcacatcttactcgggtaaccgaaagttaca
DCI01_0004_E05.b : CTGNAACAGTACGCTCACAAGCTTGAGCTTATGCACATTCTTACTCGGGGTAACCGAAAG


20110601C-014331 : GTAGCAGTAGAATTCGAGTCCTTTTCTACTGACTCTACTTTTCATGCCAAGAAACAGATT
                   ---------+---------+---------+---------+---------+---------+ 851
AMP01_0064_H11.b : GTAGCAGTANAATTCGAGTCCTTTTCTACTGACTCTACTTTTCATGCAAAGAAACAGATT
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : GTAGCAGTAAAATTCGAGTCNTTTTCactgactctactttcatgcaaagaacagattcca
DCI01_0084_B01.b : GTAGCAGTAGAATTCGAGTCCTTTTCTACTGACTCTACTTTTCATGCAAAGAAACAGATT
DCI01_0046_C06.b : GTAGCAGTAGAATTCGAGTCCTTTTCTACTGACTCTACTTTTTCATGCAAGAAACAGATT
DCI01_0012_D10.b : gtagattccagtccttttcatgactcaactttcggcaagaaacagatccatgtattgggt
DCI01_0004_E05.b : GTAGCAGTAGAAATCGAGTCCTTTTCTACTGACTCTACTTTTCATGCGAAGAAACAGATT


20110601C-014331 : CCATGTATTGTGTCCATGCTCAC*AAAGAACTCTATTTTTTTATCACCAAAAAATGAATG
                   ---------+---------+---------+---------+---------+---------+ 910
AMP01_0064_H11.b : CCATGgtatgtgtccatgctcacaaaagaactctattttttaatcactaaagaaatgatg
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : tgtattgtgtcatgctcccaaagaactcatttttttatcacaaaaaataatgattggggn
DCI01_0084_B01.b : CCATGTATTtgtgtcatgctcacaaagaactctattttttatcacctaagaaatgatgat
DCI01_0046_C06.b : CCATGTATTGTGTCCATGCTCAC*AAAGAACTCTATTTTTTtatcactaagaaatgaatg
DCI01_0012_D10.b : catgctcaaaaaaactccattttttattccttaaaattgatgattggggggtgttttttt
DCI01_0004_E05.b : CCATGTATTGTGTCCATGCTCACCAAAGAACTCTATTTTTTTATCACCAAAAAATGAATG


20110601C-014331 : ATTTGGGGTTGTTTTTTTTAATTGNATGGGAAAGGAGAAATGGTTAACCGATACTATATT
                   ---------+---------+---------+---------+---------+---------+ 970
AMP01_0064_H11.b : aattggggttgntttttttaaattgnagggaaagggaggaatggntttaacgaaactaat
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : tgttttttttaatgnatggaaaatgagaatggttactgaactaattttctccccattaaa
DCI01_0084_B01.b : tngggggntgttttttttaatttgnatgtgaaaatgagaaatgggtttaactgaactata
DCI01_0046_C06.b : attngggnntgttttttttatttgaatgtgaaatgagaatggttnnactgaactaatttc
DCI01_0012_D10.b : aattggaggggaaggagaaatgttttactgaactaaatttccccccccattaaacaatca
DCI01_0004_E05.b : ATTTGGGGTTGTTTTTTTTAATTGNATGGGAAAGGAGAAATGGTTAACCGATACTATATT


20110601C-014331 : TCCTCCCCATTTAAACCAAC........................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b : tttccctcccctttaaaacaaacccaaggccccgggggaaactttgcaatgtccattttt
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : caatctaggccccagtgatcttgcactgccatttaatcatagacttgacctccccacccg
DCI01_0084_B01.b : tttttcctcccccattnaatccaaccaatgccccagntgaaacttggcaccctgccattt
DCI01_0046_C06.b : ctctccattaatctatctatgcccaggtgatctttgcactgccatttttatcatagactt
DCI01_0012_D10.b : atgccccagggaacttttcaacgcccattttatcaataaactggaacttcccaaccgccg
DCI01_0004_E05.b : TCCTCCCCATTTAAACCAACcaaggccccagntgaactttgcactgtcatttttattcat


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b : ttcccatagaacttgaaccccccccccccgcgcggggtgtttcttggttttttttaaaaa
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : tcggtgttgacttgattataaaaaataaagggaagggtcgtccttggaggaaggataata
DCI01_0084_B01.b : ttttccataaactttgaccttcctcaacccgtccgggggtggatttgattanattaaaaa
DCI01_0046_C06.b : tgactcctcacccgtcggtgtgaacttgattattaaaaaataaaaggaagggtcccccta
DCI01_0012_D10.b : gggttgaattgaattattaaaaaaaaaagggaagggtcctccttgaaggaagaattaata
DCI01_0004_E05.b : tgaacttgacctccccaaccgggtggtgttgaaattgatttatttaaaataaaaaaggga


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b : aaaaaaggggagggggccccccttttgaggaaaaatttaatttt               
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : aacccccaaaacagtttggggggcgggcttatttcggaaaggaaaaaaacaccggagatt
DCI01_0084_B01.b : ataaaagggaaggggaccccttttggagaaaagttaattaaaccctccaataacaatttg
DCI01_0046_C06.b : taaggaggattaataaaccccaataccggtttggagagcggctaattcgggaaggaaaaa
DCI01_0012_D10.b : aaacctcaatacaggtttggggagccgcctaatttcggaaggggaaataaactcggggga
DCI01_0004_E05.b : ggggccccccttagaagaataattaatccaccctccaattcaagtttggagagctgccta


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b :                                                             
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : ccggaggggtctctcccggtctgttttgttaaaaaaaaaaaccaaacaccggcggcgggg
DCI01_0084_B01.b : gggaaccgggccgaaatctggaatgggaagatacatctcggt                 
DCI01_0046_C06.b : aataccgggaattcggaagggtcttcaacgttggtttggt                   
DCI01_0012_D10.b : ttctgaaaagggttctcagactttgtttttccagaaaaaaaaaaaccccccctctctg 
DCI01_0004_E05.b : attccggaaaggaaaaaacacacgggaattcggggagggggtttctcacgtttgtgtgtt


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b :                                                             
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : cgccttaaaatgagaggaaattataccgggggggggcgggggggncaaaaaaacagcgga
DCI01_0084_B01.b :                                                             
DCI01_0046_C06.b :                                                             
DCI01_0012_D10.b :                                                             
DCI01_0004_E05.b : aggaaaaaagaaaaaacacaaagggggcgcgggggggggattatataagaagaaaaattt


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b :                                                             
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b : cccctattg                                                  
DCI01_0084_B01.b :                                                             
DCI01_0046_C06.b :                                                             
DCI01_0012_D10.b :                                                             
DCI01_0004_E05.b : tttctcgcgcgggtgtggcggcggnnnnnnnnnnnntgcttttatatctttttctcctcc


20110601C-014331 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 990
AMP01_0064_H11.b :                                                             
AMP01_0002_G08.b :                                                             
AMP01_0068_D01.b :                                                             
DCI01_0084_B01.b :                                                             
DCI01_0046_C06.b :                                                             
DCI01_0012_D10.b :                                                             
DCI01_0004_E05.b : ctccttttta