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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014476

Length: 1,851

Sequence [FASTA format sequence]
GGCATGGCTG GCACCACAGA CCGCGAAGAG GCCACTCGGC TCCTGGCTGA GAAGCGGCGC
CAGGCCCGGG AGCAGCGGGA GCGCGAGGAA CAGGAGCGGA GACTGCAGGC GGAAAGGGAC
AAACGATTGC GAGAGGAGCA GCTGGCTCGG GAGGCCGAGG CCCGGGCAGA GCGGGAAGCG
GAGGCCCGGA GGCGGGAGGA GCAGGAGGCC CGGGAGAAGG CGCAAGCCGA GCAGGAGGAG
CAGGAGCGAC TGCAGAAGCA GAAAGAGGAG GCCGAAGCTC GATCCCGAGA GGAAGCGGAG
CGGCAGCGTC TGGAGCGGGA GAAGCACTTC CAGCGGGAGG AGCAAGAGCG GCAAGAGCGC
AAAAAGCGCC TGGAGGAGAT CATGAAGAGG ACTCGAAAGT CAGAAGCTGC TGAAACCAAG
AAGCAGGACA GAAAGGAGGC CAAGACCAAC AATTCCAGCC CAGTGATAGA CCCTGCGAAA
GCCATGGAGG CTCGACCCTC AGGGCTGCAG AAGGAGGCTG TACAGAAAGA GGAGCTGGTC
CCCCAGGAGC CTCAGTGGAG CCTGCCAAAC AAGGAGTCGC CAGGGTCCCT GGTGAACGGC
CTGCAGCCTC TCCCAGCGCA CCAGGAGAAT GGCTTCTCCC CTAAGGGGCC CTCTGGGGAC
AAGAGTCTGG GCCGAACGCC AGAGGCTCTC CTGCCCTTCC CAGAGGCAGA GGCCTTCCTC
AAGAAAGCAG TGGTGCAGCC TCCCCAGGTC ACAGAAGTCC TTTAAGGGGT TGCCTTGGAT
CCAGGCACAG CTATGAGGGC TCCTCTGCAT CATCTGCCAG GATGTCTGGA AGAGAAAGAG
ACAGAACAAA GCCGGAAGTG GCCTGGGCCC CTGGGGGTTG GGTCCTCTCT GTTATTTTTA
ATCTGCACCT TATAGACTGA TGTCTCTTTG GCTGGAGCCA GACCCTGCCC CTCAGTGCAT
TCGTGTGCTC ACACGCGCGG ACACCCGCAT ACACACACAT ACACTCACAG CCTCTCTGGC
CTCCTCCCAT GGGGAAGGGC CACCTGTAGT ATTTGCCTTG GTTTGGGCGG GGTACAGTGG
ATGTGAATAC TGTAAATAGC TCGTGCTCAG ACTCCTCTGC GTGGAGGGGG CGGGTGCAGG
AGGCAGACCC TCCCAAGACT CCCTGGGGAG ATCTTCCTCC CTCTATTTAA CTGTATCTGA
GGGGGAACCC AGGTCTGGGG ATGGGGGCAC CTTGGGCCAC AGGATACTGG TTGCTTTAGG
GGTACCCGTG CCCCCCTGCC CTCGCCTGGA ATCAGTGTTA TTGCATCCGA TCAAATTTCT
CCAGAAATAA AGTGAGAATA ATTCTGCCAG TCCTGTCTAT CCCTGGGGCT GGTTGGGGAC
AGTGGCCTCT TGAGTTCCCA GAAGAACTTG AGGAGCCAGG ACCTAGGGAT AACCATCCAT
AGCTGGTACC AGCCCTAGAC ATCCTGCCTG TGCTTTTCCA TTTTGTCATT CATTCATGTG
TTCATTTAAC AGAAATAGTT ACATCCGCTC TGTACCAGGC AGGGAGCTCT GTGCTGGGGA
TCCAGTAGTA AGAAAAAGAC ACAGTCTCTG TTCTCCTGGA GTTGACAGTC TAGCAGGTGA
GCATCATAAG CACTGAGATG CCCCTTTCTC ATCCCATACA GAATCCTGAT TTCTGTCANG
TGGCTTTCTT CCCTCTGGAC CCCACCCTGT GCTTCAGCAG AAGTGGATCC TAAAGTCAGG
GGTGAATCAT NGATATAATG AACCCCAAAT GATGGTCCCA TGTCCCTTGC AAGTGATTGG
NTTTAGGTGT GGGTACATAA TATACTTGCA GCCAGCAGAT ACAAGAAAGG C


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMAP7D1MAP7 domain-containing protein 1 [Homo sapiens]. 1999e-51


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMtap7d1MAP7 domain-containing protein 1 isoform 2 [Mus musculus]. 2142e-55
Contig/Assembly ProteinMtap7d1MAP7 domain-containing protein 1 isoform 1 [Mus musculus]. 2142e-55


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC608497PREDICTED: similar to proline arginine rich coiled coil 1 [Canis familiaris]. 2111e-54


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMAP7D1PREDICTED: arginine/proline rich coiled-coil 1-like [Bos taurus]. 2165e-56
Contig/Assembly ProteinMAP7D1PREDICTED: arginine/proline rich coiled-coil 1-like [Bos taurus]. 2165e-56


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinMAP7D1PREDICTED: MAP7 domain-containing protein 1 [Sus scrofa]. 2471e-65


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ADR010093F12ADR01_0093_F12.bDB789789 
ADR010102D04ADR01_0102_D04.bDB790559 AK389598
LVR010100A01LVR01_0100_A01.bBP441008 AK232614
TCH010100D12TCH01_0100_D12.bCJ029751 
THY010057F11THY01_0057_F11.bBP166658 AK351669
UTR010001A11UTR01_0001_A11.bBP169798 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
476C300.600WNGCG/A
T200.400GTG/V


Alignment:      TOP

20110601C-014476 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
ADR01_0102_D04.b : nnttttgataaacggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0100_A01.b : ggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0100_D12.b : tttggttggacttagacxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : ..........GGCATGGCTGGCACCACAGACCGCGAAGAGGCCACTCGGCTCCTGGCTGA
---------+---------+---------+---------+---------+---------+ 50
ADR01_0102_D04.b : xxxxxxxxxxGGCATGGCTGGCACCACAGACCGCGAAGAGGCCACTCGGCTCCTGGCTGA
LVR01_0100_A01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxcagacCGCGAAGAGGCCACTCGGCTCCTGGCTGA
TCH01_0100_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtCGCGAAGAGGCCACTCGGCTCCTGGCTGA
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : GAAGCGGCGCCAGGCCCGGGAGCAGCGGGAGCGCGAGGAACAGGAGCGGAGACTGCAGGC
---------+---------+---------+---------+---------+---------+ 110
ADR01_0102_D04.b : GAAGCGGCGCCAGGCCCGGGAGCAGCGGGAGCGCGAGGAACAGGAGCGGAGACTGCAGGC
LVR01_0100_A01.b : GAAGCGGCGCCAGGCCCGGGAGCAGCGGGAGCGCGAGGAACAGGAGCGGAGACTGCAGGC
TCH01_0100_D12.b : GAAGCGGCGCCAGGCCCGGGAGCAGCGGGAGCGCGAGGAACAGGAGCGGAGACTGCAGGC
THY01_0057_F11.b : gggtgcacctatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : GGAAAGGGACAAACGATTGCGAGAGGAGCAGCTGGCTCGGGAGGCCGAGGCCCGGGCAGA
---------+---------+---------+---------+---------+---------+ 170
ADR01_0102_D04.b : GGAAAGGGACAAACGATTGCGAGAGGAGCAGCTGGCTCGGGAGGCCGAGGCCCGGGCAGA
LVR01_0100_A01.b : GGAAAGGGACAAACGATTGCGAGAGGAGCAGCTGGCTCGGGAGGCCGAGGCCCGGGCAGA
TCH01_0100_D12.b : GGAAAGGGACAAACGATTGCGAGAGGAGCAGCTGGCTCGGGAGGCCGAGGCCCGGGCAGA
THY01_0057_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTGGCTCGGGAGGCCGAGGCCCGGGCAGA
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : GCGGGAAGCGGAGGCCCGGAGGCGGGAGGAGCAGGAGGCCCGGGAGAAGGCGCAAGCCGA
---------+---------+---------+---------+---------+---------+ 230
ADR01_0102_D04.b : GCGGGAAGCGGAGGCCCGGAGGCGGGAGGAGCAGGAGGCCCGGGAGAAGGCGCAAGCCGA
LVR01_0100_A01.b : GCGGGAAGCGGAGGCCCGGAGGCGGGAGGAGCAGGAGGCCCGGGAGAAGGCGCAAGCCGA
TCH01_0100_D12.b : GCGGGAAGCGGAGGCCCGGAGGCGGGAGGAGCAGGAGGCCCGGGAGAAGGCGCAAGCCGA
THY01_0057_F11.b : GCGGGAAGCGGAGGCCCGGAGGCGGGAGGAGCAGGAGGCCCGGGAGAAGGCGCAAGCCGA
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : GCAGGAGGAGCAGGAGCGACTGCAGAAGCAGAAAGAGGAGGCCGAAGCTCGATCCCGAGA
---------+---------+---------+---------+---------+---------+ 290
ADR01_0102_D04.b : GCAGGAGGAGCAGGAGCGACTGCAGAAGCAGAAAGAGGAGGCCGAAGCTCGATCCCGAGA
LVR01_0100_A01.b : GCAGGAGGAGCAGGAGCGACTGCAGAAGCAGAAAGAGGAGGCCGAAGCTCGATCCCGAGA
TCH01_0100_D12.b : GCAGGAGGAGCAGGAGCGACTGCAGAAGCAGAAAGAGGAGGCCGAAGCTCGATCCCGAGA
THY01_0057_F11.b : GCAGGAGGAGCAGGAGCGACTGCAGAAGCAGAAAGAGGAGGCCGAAGCTCGATCCCGAGA
UTR01_0001_A11.b :
ADR01_0093_F12.b :
20110601C-014476 : GGAAGCGGAGCGGCAGCGTCTGGAGCGGGAGAAGCACTTCCAGCGGGAGGAGCAAGAGCG
---------+---------+---------+---------+---------+---------+ 350
ADR01_0102_D04.b : GGAAGCGGAGCGGCAGCGTCTGGAGCGGGAGAAGCACTTCCAGCGGGAGGAGCAAGAGCG
LVR01_0100_A01.b : GGAAGCGGAGCGGCAGCGTCTGGAGCGGGAGAAGCACTTCCAGCGGGAGGAGCAAGAGCG
TCH01_0100_D12.b : GGAAGCGGAGCGGCAGCGTCTGGAGCGGGAGAAGCACTTCCAGCGGGAGGAGCAAGAGCG
THY01_0057_F11.b : GGAAGCGGAGCGGCAGCGTCTGGAGCGGGAGAAGCACTTCCAGCGGGAGGAGCAAGAGCG
UTR01_0001_A11.b : gggctgxxxxxxxxxxxxxx
ADR01_0093_F12.b :
20110601C-014476 : GCAAGAGCGCAAAAAGCGCCTGGAGGAGATCATGAAGAGGACTCGAAAGTCAGAAGCTGC
---------+---------+---------+---------+---------+---------+ 410
ADR01_0102_D04.b : GCAAGAGCGCAAAAAGCGCCTGGAGGAGATCATGAAGAGGACTCGAAAGTCAGAAGCTGC
LVR01_0100_A01.b : GCAAGAGCGCAAAAAGCGCCTGGAGGAGATCATGAAGAGGACTCGAAAGTCAGAAGCTGC
TCH01_0100_D12.b : GCAAGAGCGCAAAAAGCGCCTGGAGGAGATCATGAAGAGGACTCGAAAGTCAGAAGCTGC
THY01_0057_F11.b : GCAAGAGCGCAAAAAGCGCCTGGAGGAGATCATGAAGAGGACTCGAAAGTCAGAAGCTGC
UTR01_0001_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ADR01_0093_F12.b :
20110601C-014476 : TGAAACCAA***GAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
---------+---------+---------+---------+---------+---------+ 467
ADR01_0102_D04.b : TGAAACCAA***GAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
LVR01_0100_A01.b : TGAAACCAAGCAGAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
TCH01_0100_D12.b : TGAAACCAA***GAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
THY01_0057_F11.b : TGAAACCAA***GAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
UTR01_0001_A11.b : ctctttaaagcAGAAGCAGGACAGAAAGGAGGCCAAGACCAACAATTCCAGCCCAGTGAT
ADR01_0093_F12.b :
20110601C-014476 : AGACCCTGCGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
---------+---------+---------+---------+---------+---------+ 527
ADR01_0102_D04.b : AGACCCTGTGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
LVR01_0100_A01.b : AGACCCTGTGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
TCH01_0100_D12.b : AGACCCTGCGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
THY01_0057_F11.b : AGACCCTGCGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
UTR01_0001_A11.b : AGACCCTGCGAAAGCCATGGAGGCTCGACCCTCAGGGCTGCAGAAGGAGGCTGTACAGAA
ADR01_0093_F12.b :
20110601C-014476 : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCTGCCAAACAAGGAGTCGCCAGGGTC
---------+---------+---------+---------+---------+---------+ 587
ADR01_0102_D04.b : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCTGCCAAACAAGGAGTCGCCAGGGTC
LVR01_0100_A01.b : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCTGCCAAACAAGGAGTCGCCAGGGTC
TCH01_0100_D12.b : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCCGCCAAACAAGGAGTCGCCAGGGTC
THY01_0057_F11.b : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCTGCCAAACAAGGAGTCGCCAGGGTC
UTR01_0001_A11.b : AGAGGAGCTGGTCCCCCAGGAGCCTCAGTGGAGCCTGCCAAACAAGGAGTCGCCAGGGTC
ADR01_0093_F12.b :
20110601C-014476 : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
---------+---------+---------+---------+---------+---------+ 647
ADR01_0102_D04.b : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
LVR01_0100_A01.b : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
TCH01_0100_D12.b : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
THY01_0057_F11.b : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
UTR01_0001_A11.b : CCTGGTGAACGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAATGGCTTCTCCCCTAAGGG
ADR01_0093_F12.b :
20110601C-014476 : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
---------+---------+---------+---------+---------+---------+ 707
ADR01_0102_D04.b : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
LVR01_0100_A01.b : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
TCH01_0100_D12.b : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
THY01_0057_F11.b : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
UTR01_0001_A11.b : GCCCTCTGGGGACAAGAGTCTGGGCCGAACGCCAGAGGCTCTCCTGCCCTTCCCAGAGGC
ADR01_0093_F12.b :
20110601C-014476 : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
---------+---------+---------+---------+---------+---------+ 767
ADR01_0102_D04.b : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
LVR01_0100_A01.b : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
TCH01_0100_D12.b : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
THY01_0057_F11.b : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
UTR01_0001_A11.b : AGAGGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCCCAGGTCACAGAAGTCCTTTAAGG
ADR01_0093_F12.b :
20110601C-014476 : GGTTGCCTTGGATCCAGGCACAGCTATGAGGGCTCCTCTGCATCATCTGCCAGGATGTCT
---------+---------+---------+---------+---------+---------+ 827
ADR01_0102_D04.b : GGTTGCCTTGGATCCAGGCACAGCTATGAGGGCTCCTCTGCATCATCTGCCAGGATGTCT
LVR01_0100_A01.b : GGTTGCCTTGGATCCAGGCACAGCTATGAGGGCTCCTCTGCATCATCTGCCAGGATGTCT
TCH01_0100_D12.b : GGTTGCCTTGGATCCAGGCACAGCTATGAAGGCTCCTCTGCATCATCTGCCAGGATGTCT
THY01_0057_F11.b : GGTTGCCTTGGATCCAGGCACAGCTATGAGGGCTCCTCTGCATCATCTGCCAGGATGTCT
UTR01_0001_A11.b : GGTTGCCTTGGATCCAGGCACAGCTATGAGGGCTCCTCTGCATCATCTGCCAGGATGTCT
ADR01_0093_F12.b :
20110601C-014476 : GGAAGAGAAAGAGACAGAACAAAGCCGGAAGTGGCCTGGGC*CCCTGGGGGTTGGGTCCT
---------+---------+---------+---------+---------+---------+ 886
ADR01_0102_D04.b : GGGAGAGAAAGAGACAGAACAAAGCCGGAAGTGGCCTGGGG*CCCTGGGGGNTGGGTCCT
LVR01_0100_A01.b : GGAAGAGAAAGAGACAGAACAAAGCCGGAAGTGGCCTGGGC*CCCTGGGGGTTGGGTCCT
TCH01_0100_D12.b : GGGAGAGAAAGAGACAGAACAAAGCCGGGAGTGGCCTGGGCCCCCTGGGGGTTGGGGTCT
THY01_0057_F11.b : GGAAGAGAAAGAGACAGAACAAAGCCGGAAGTGGCCTGNGC*CCCTGGGGGTTGGGTCCT
UTR01_0001_A11.b : GGAAGAGAAAGAGACAGAACAAAGCCGGCAGTGGCCTGGGC*CCCTGGGGGTTGGGTCCT
ADR01_0093_F12.b : nnncctttttnnnttgataaagcagcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-014476 : CTCTGTTATTTTTAATCTGCACCTTATAGACTGATGTCTCTTTGGCTGGAGCCAGACCCT
---------+---------+---------+---------+---------+---------+ 946
ADR01_0102_D04.b : CTCNTGTATTTTT*ATCTGCACC*TATAGACTGATGTCTCTTTGGCTGGAGCCAGACCCT
LVR01_0100_A01.b : CTCTGTTATTTTTTATCTGCACCTTATAGACTGATGTCTCTTTGGgctggagcccagacc
TCH01_0100_D12.b : CTCTGTTATTTTTTATCTGCACCTTATAGACTGATGTCTCTTGGGCTGGAGCCAGACCCT
THY01_0057_F11.b : CTCTGTTATTTTTAATCTGCACCTTATAGACTGATGTCTCTTTGGCTGGAGCCAGACCCT
UTR01_0001_A11.b : CTCTGTTATTTTTAATCTGCACCTTATAGACTGATGTCTCTTTGGCTGGAGCCAGACCCT
ADR01_0093_F12.b : xxxxxxxxxTTTTAATCTGCACCTTATAGACTGATGTCTCTTTGGCTGGAGCCAGACCCT
20110601C-014476 : GCCCCTCAGTGCATTCGTGTGCTCACACGCGCGGACACCCGCATACACACACATACACTC
---------+---------+---------+---------+---------+---------+ 1006
ADR01_0102_D04.b : GCCCCTCAGTGCATTCGTGTGCTCACACGCGCGGACACCCGCATACACACACATACACTC
LVR01_0100_A01.b : ctgccccctcagtgcattccgtgtgctcacaccccccggacaccccgcataccccacaac
TCH01_0100_D12.b : GCCCCTCAGTGCATTCTTGTGCTCACACGCGCGGAACCCCGCATACACACCCATACACTC
THY01_0057_F11.b : GCCCCTCAGTGCATTCGTGTGCTCACACGCGCGGACACCCGCATACACACACATACACTC
UTR01_0001_A11.b : GCCCCTCAGTGCATTCGTGTGCTCACACGCGCGGACACCCGCATACACACACATACACTC
ADR01_0093_F12.b : GCCCCTCAGTGCATTCGTGTGCTCACACGCGCGGACACCCGCATACACACACATACACTC
20110601C-014476 : ACAGCCTCTCTGGCCTCCTCCCATGGGGAAGGGCCACCTGTAGTATTTGCCTTGGTTTGG
---------+---------+---------+---------+---------+---------+ 1066
ADR01_0102_D04.b : ACAGCCTCtctgggcctctcccatggggaaggggcactgtagtatttgcctgggttgggc
LVR01_0100_A01.b : ctacacctcccagccctctcctggccctccttcccatggggggaaagggcccaccctgtt
TCH01_0100_D12.b : CCAGCCTCtctggcctcctcccttggggagggccactggtataattgcctgttttgggcg
THY01_0057_F11.b : ACAGCCTCTCTGGCCTCTTCCCATGGGGgagagcccacctgtagtattttgctttgtttt
UTR01_0001_A11.b : ACAGCCTCTCTGGCCTCCTCCCATGGGGAAGGGCCACCTGTAGTATTTGCCTTGGTTTGG
ADR01_0093_F12.b : ACAGCCTCTCTGGCCTCCTCCCATGGGGAAGGGCCACCTGTAGTATTTGCCTTGGTTTGG
20110601C-014476 : GCGGGGTACAGTGGATGTGAATACTGTAAATAGCTCGTGCTCAGACTCCTCTGCGTGGAG
---------+---------+---------+---------+---------+---------+ 1126
ADR01_0102_D04.b : ggggtacagtggatgtgatactgtaaatagctcgtgctcaactctctgcttgagggggcg
LVR01_0100_A01.b : aatttattttgcccttttggtttttggggccggggggttaccagtttgggatttttttaa
TCH01_0100_D12.b : ggggaccgtgaagggaaaacggtaaatacccggggcccaaatccccttcttgaaaggggc
THY01_0057_F11.b : gggcggggtacagtgggatgtgaatactggtaaatagctccgtgcttcgacttccttttg
UTR01_0001_A11.b : GCGGGGTACAGTGGATG**AATACTGTAAATAGCTCGTGCTCTGACTCCTCTGCGTGGAG
ADR01_0093_F12.b : GCGGGGTACAGTGGATGTGAATACTGTAAATAGCTCGTGCTCAGACTCCTCTGCGTGGAG
20110601C-014476 : GGGGCGGGTGCAGGAGGCAGACCCTCCCAAGACTCCCTGGGGAGATCTTCCTCCCTCTAT
---------+---------+---------+---------+---------+---------+ 1186
ADR01_0102_D04.b : gggcaggaagcaaaccctccagactcccggggaaatctcttccccatttaccgtttggag
LVR01_0100_A01.b : aaaaccttgttaaaaatataaccctccccttgcgcctcctaaaacacccctccttccctt
TCH01_0100_D12.b : ggtgcccgaaggaaacacccccagaactccggggaagacttccccccctttttacggtct
THY01_0057_F11.b : ctttgaagggggcggggtggcaggaaggcagaacccttcccaagaatttcccttggggga
UTR01_0001_A11.b : GGGGCGGGTGCTGGAGGCAGACCCTCCCCAGACTCCCTGGGGAGATCTTCCTCCCTCTAT
ADR01_0093_F12.b : GGGGCGGGTGCAGGAGGCAGACCCTCCCAAGACTCCCTGGGGAGATCTTCCTCCCTCTAT
20110601C-014476 : TTAACTGTATCTGAGGGGGAACCCAGGTCTGGGGATGGGGGCACCTTGGGCCACAGGATA
---------+---------+---------+---------+---------+---------+ 1246
ADR01_0102_D04.b : gggaactcggttggggaggggcactttggcccaaggactggttgcttagggacccggccc
LVR01_0100_A01.b : tccccccgttttgggggaggggggggagggggcgcccgg
TCH01_0100_D12.b : cggagggaaacccgctcggggaagggggccctgtggccaaagaaacggtgtccttt
THY01_0057_F11.b : gattcttccttccccttctttttaaacttttttttttaaggggggggaacccccggggtt
UTR01_0001_A11.b : TTAACTGTATCTGAng
ADR01_0093_F12.b : TTAACTGTATCTGAGGGGGAACCCAGGTCTGGGGATGGGGGCACCTTGGGCCACAGGATA
20110601C-014476 : CTGGTTGCTTTAGGGGTACCCGTGCCCCCCTGCCCTCGCCTGGAATCAGTGTTATTGCAT
---------+---------+---------+---------+---------+---------+ 1306
ADR01_0102_D04.b : tcgccctccggaacatgttttgctccaaatattcccaaaagagggaaattcctccaaaaa
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b : ttggggggaatggggg
UTR01_0001_A11.b :
ADR01_0093_F12.b : CTGGTTGCTTTAGGGGTACCCGTGCCCCCCTGCCCTCGCCTGGAATCAGTGTTATTGCAT
20110601C-014476 : CCGATCAAATTTCTCCAGAAATAAAGTGAGAATAATTCTGCCAGTCCTGTCTATCCCTGG
---------+---------+---------+---------+---------+---------+ 1366
ADR01_0102_D04.b : aaaaagccatgttctatgtgggcgcgcctctatatcccgggcgcaatccaccctttttgg
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : CCGATCAAATTTCTCCAGAAATAAAGTGAGAATAATTCTGCCAGTCCTGTCTATCCCTGG
20110601C-014476 : GGCTGGTTGGGGACAGTGGCCTCTTGAGTTCCCAGAAGAACTTGAGGAGCCAGGACCTAG
---------+---------+---------+---------+---------+---------+ 1426
ADR01_0102_D04.b : gacgctagagatatacgggc
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : GGCTGGTTGGGGACAGTGGCCTCTTGAGTTCCCAGAAGAACTTGAGGAGCCAGGACCTAG
20110601C-014476 : GGATAACCATCCATAGCTGGTACCAGCCCTAGACATCCTGCCTGTGCTTTTCCATTTTGT
---------+---------+---------+---------+---------+---------+ 1486
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : GGATAACCATCCATAGCTGGTACCAGCCCTAGACATCCTGCCTGTGCTTTTCCATTTTGT
20110601C-014476 : CATTCATTCATGTGTTCATTTAACAGAAATAGTTACATCCGCTCTGTACCAGGCAGGGAG
---------+---------+---------+---------+---------+---------+ 1546
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : CATTCATTCATGTGttcatttaacagaaatagttacatccgctctgtaccaggcagggag
20110601C-014476 : CTCTGTGCTGGGGATCCAGTAGTAAGAAAAAGACACAGTCTCTGTTCTCCTGGAGTTGAC
---------+---------+---------+---------+---------+---------+ 1606
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : ctctgtgctggggatccagtagtaagaaaaagacacagtctctgttctcctggagttgac
20110601C-014476 : AGTCTAGCAGGTGAGCATCATAAGCACTGAGATGCCCCTTTCTCATCCCATACAGAATCC
---------+---------+---------+---------+---------+---------+ 1666
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : agtctagcaggtgagCATCATAAGCACTGAGATGCCCCTTTCTCATCCCATACAGAATCC
20110601C-014476 : TGATTTCTGTCANGTGGCTTTCTTCCCTCTGGACCCCACCCTGTGCTTCAGCAGAAGTGG
---------+---------+---------+---------+---------+---------+ 1726
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : TGATTTCTGTCANGTGGCTTTCTTCCCTCTGGACCCCACCCTGTGCTTCAGCAGAAGTGG
20110601C-014476 : ATCCTAAAGTCAGGGGTGAATCATNGATATAATGAACCCCAAATGATGGTCCCATGTCCC
---------+---------+---------+---------+---------+---------+ 1786
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : ATCCTAAAGTCAGGGGTGAATCATNGATATAATGAACCCCAAATGATGGTCCCATGTCCC
20110601C-014476 : TTGCAAGTGATTGGNTTTAGGTGTGGGTACATAATATACTTGCAGCCAGCAGATACAAGA
---------+---------+---------+---------+---------+---------+ 1846
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : TTGCAAGTGATTGGNTTTAGGTGTGGGTACATAATATACTTGCAGCCAGCAGATACAAGA
20110601C-014476 : AAGGC.......................................................
---------+---------+---------+---------+---------+---------+ 1851
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : AAGGCttcntggggtccnatcgtagctcagcagaatgaatctgactagtatccatgagga
20110601C-014476 : ............................................................
---------+---------+---------+---------+---------+---------+ 1851
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : cgcagcttcgatccctggcctccctcagtgggttaaaaatcagcattgcctctaacctgt
20110601C-014476 : ............................................................
---------+---------+---------+---------+---------+---------+ 1851
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : ggctaaggtcaaaaccaaggctgggatctgcaattcctgtggccggggggaaagccaagg
20110601C-014476 : ............................................................
---------+---------+---------+---------+---------+---------+ 1851
ADR01_0102_D04.b :
LVR01_0100_A01.b :
TCH01_0100_D12.b :
THY01_0057_F11.b :
UTR01_0001_A11.b :
ADR01_0093_F12.b : gttgcaaattccattcaaccccaacccgggaaacttt