Assembly Information

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name: 20110601C-014556

Sequence: [FASTA format sequence] GGGACTACGC GGGTTTACTG GTGGCCTCCC CGGTATCCAG CCGACCCGGC CGGGTGGACC CTTAGCTGGC GCCGGCTCCG GGAAGCCTAG AGAAGGGGAG GGGCGGACTC AGCTGGAGCT GAGCATCGTC CGGGTGGGCT GAGAGGCCGT GGCCTCTCCG TTCGAAGCAC CACCTGTCGC GGGGCGAGAC TTGTGGTGAG AGAAATGATG TTGTCCAGAT TTAAAATAGT TGCCACTCCT TGTACTCTAG CATGTCGTCA TTTGCACATA AAAGAGAAAG GCAAGCCACT TATGTTGAAC CCAAGAACAA ACAAGGGAAT GGCATTTACA TTACAGGAAC GACAAATGCT GGGTCTTCAA GGACTTCTCC CTCCCAAAAT AGAGACACAA GATATTCAAG CTTTACGATT CCATAGAAAC GTGAAAAAGC TGAATGGCCC TTTGGAAAAA TACATCTATA TAATGGGAAT TCAAGAAAGA AATGAGAAGT TGTTTTATAG AATACTGCAA GATGATATTG AAACTCTAAT GCCAATTGTA TATACACCAA CAGTTGGTCT TGCCTGTTCC CAGTATGGAC ACATCTTTAG AAGACCCAAG GGATTATTTA TTTCAATCTC AGACAGAGGT CATGTTAGAT CAATTGTGGA TAACTGGCCA GAAAATCATG TTAAGGCTGT TGTGGTGACT GATGGAGAGA GAATTCTGGG TCTTGGAGAT CTGGGTGTCT ATGGAATGGG AATTCCAGTA GGAAAACTAT GTTTGTATAC AGCTTGTGCA GGAATACGGC CTGATAGATG TCTGCCTGTG TGTATTGATG TAGGAACCGA TAATCCAGCA CTCTTAAAAG ACCCATTTTA CATGGGCTTA TATCAGAAAA GAGATCGATC ACAGCGTTAT GATGATCTAA TTGATGAATT TATGAAGGCC ATTACTGACA GATATGGACG GAACATACTT ATTCAGTTTG AAGACTTTGG AAATCATAAT GTATTCAGGT TCTTGAGAAA AATACGAGAA AATATTGTAC CCTTCATGAC AATATTCAAG GGACAGCTGC AGTAGCTCTA GCTGGTCTGC TTGCAGCCCA AAAAGTTATG GTAAATCCAT CTCAGAACAC AAAATCTTAT TTC

SNP mapping information

SNP ID Rel. Chr. Location (cM)
Assembly Overview: TOP

Change score limit to

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
ME2 NAD-dependent malic enzyme, mitochondrial isoform 1 precursor [Homo sapiens]. 532 e-151 O

ME2 NAD-dependent malic enzyme, mitochondrial isoform 2 precursor [Homo sapiens]. 532 e-151 O

ME1 NADP-dependent malic enzyme [Homo sapiens]. 332 5e-91 O

ME3 NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens]. 331 9e-91 O

ME3 NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens]. 331 9e-91 O

ME3 NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens]. 331 9e-91 O

Locus	Definition	Score	E value	FL
ME2	NAD-dependent malic enzyme, mitochondrial isoform 1 precursor [Homo sapiens].	532	e-151	O
ME2	NAD-dependent malic enzyme, mitochondrial isoform 2 precursor [Homo sapiens].	532	e-151	O
ME1	NADP-dependent malic enzyme [Homo sapiens].	332	5e-91	O
ME3	NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].	331	9e-91	O
ME3	NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].	331	9e-91	O
ME3	NADP-dependent malic enzyme, mitochondrial precursor [Homo sapiens].	331	9e-91	O

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Me2 NAD-dependent malic enzyme, mitochondrial precursor [Mus musculus]. 515 e-146 O

LOC100505264 PREDICTED: NAD-dependent malic enzyme, mitochondrial-like [Mus musculus]. 451 e-127 O

Me3 NADP-dependent malic enzyme, mitochondrial precursor [Mus musculus]. 333 1e-91 O

Me1 NADP-dependent malic enzyme isoform 1 [Mus musculus]. 321 6e-88 O

Me1 NADP-dependent malic enzyme isoform 2 [Mus musculus]. 308 4e-84 O

Locus	Definition	Score	E value	FL
Me2	NAD-dependent malic enzyme, mitochondrial precursor [Mus musculus].	515	e-146	O
LOC100505264	PREDICTED: NAD-dependent malic enzyme, mitochondrial-like [Mus musculus].	451	e-127	O
Me3	NADP-dependent malic enzyme, mitochondrial precursor [Mus musculus].	333	1e-91	O
Me1	NADP-dependent malic enzyme isoform 1 [Mus musculus].	321	6e-88	O
Me1	NADP-dependent malic enzyme isoform 2 [Mus musculus].	308	4e-84	O

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC476198 PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) isoform 2 [Canis familiaris]. 540 e-154 O

LOC476198 PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) isoform 1 [Canis familiaris]. 380 e-106 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 2 [Canis familiaris]. 334 1e-91 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 7 [Canis familiaris]. 318 8e-87 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 6 [Canis familiaris]. 318 8e-87 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 5 [Canis familiaris]. 318 8e-87 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 3 [Canis familiaris]. 318 8e-87 O

ME1 PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1) [Canis familiaris]. 313 2e-85 O

LOC485151 PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 1 [Canis familiaris]. 303 2e-82 O

Locus	Definition	Score	E value	FL
LOC476198	PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) isoform 2 [Canis familiaris].	540	e-154	O
LOC476198	PREDICTED: similar to NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic enzyme 2) isoform 1 [Canis familiaris].	380	e-106	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 2 [Canis familiaris].	334	1e-91	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 7 [Canis familiaris].	318	8e-87	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 6 [Canis familiaris].	318	8e-87	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 5 [Canis familiaris].	318	8e-87	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 3 [Canis familiaris].	318	8e-87	O
ME1	PREDICTED: similar to NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1) [Canis familiaris].	313	2e-85	O
LOC485151	PREDICTED: similar to malic enzyme 3, NADP(+)-dependent, mitochondrial isoform 1 [Canis familiaris].	303	2e-82	O

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
ME2 NAD-dependent malic enzyme, mitochondrial [Bos taurus]. 550 e-157 O

ME3 NADP-dependent malic enzyme, mitochondrial [Bos taurus]. 332 5e-91 O

ME1 NADP-dependent malic enzyme [Bos taurus]. 316 2e-86 O

Locus	Definition	Score	E value	FL
ME2	NAD-dependent malic enzyme, mitochondrial [Bos taurus].	550	e-157	O
ME3	NADP-dependent malic enzyme, mitochondrial [Bos taurus].	332	5e-91	O
ME1	NADP-dependent malic enzyme [Bos taurus].	316	2e-86	O

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
ME2 PREDICTED: NAD-dependent malic enzyme, mitochondrial [Sus scrofa]. 558 e-160 O

ME3 PREDICTED: LOW QUALITY PROTEIN: NADP-dependent malic enzyme, mitochondrial [Sus scrofa]. 332 2e-91 O

ME1 PREDICTED: NADP-dependent malic enzyme [Sus scrofa]. 327 7e-90 O

Locus	Definition	Score	E value	FL
ME2	PREDICTED: NAD-dependent malic enzyme, mitochondrial [Sus scrofa].	558	e-160	O
ME3	PREDICTED: LOW QUALITY PROTEIN: NADP-dependent malic enzyme, mitochondrial [Sus scrofa].	332	2e-91	O
ME1	PREDICTED: NADP-dependent malic enzyme [Sus scrofa].	327	7e-90	O

Assembly Members: 6 TOP

Library Plate Loc. Read Name Accession Full Seq.

DCI01 0011 B03 DCI01_0011_B03.b DB791260
DCI01 0038 E04 DCI01_0038_E04.b DB793690
HTMT1 0141 E11 HTMT1_0141_E11.b HX225932
ITT01 0057 B08 ITT01_0057_B08.b BW981040
LNG01 0021 D12 LNG01_0021_D12.b BP436851
THY01 0015 A12 THY01_0015_A12.b BP160487

SNP: 1 TOP
Loc. Allele Individuals Freq. Type AA Change
Western Meishan
430 C 4 0 0.667 W S CTG/L
T 2 0 0.333 TTG/L

Alignment: TOP

20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : ngtatctatagggctgctcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b :                                                             
HTMT1_0141_E11.b :                                                             
DCI01_0011_B03.b :                                                             


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 0
THY01_0015_A12.b :       tagcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0038_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0021_D12.b :                gcttggcattcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ITT01_0057_B08.b :                                               nnnggtgxxxxxxx
HTMT1_0141_E11.b :                                                             
DCI01_0011_B03.b :                                                             


20110601C-014556 : ...............................GGGACTACGCGGGTTTACTGGTGGCCTCC
                   ---------+---------+---------+---------+---------+---------+ 29
THY01_0015_A12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGGACTACGCGGGTTTACTGGTGGCCTCC
DCI01_0038_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTACGCGGATTTACTGGTGGCCTCC
LNG01_0021_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgaTTTACTGGTGGCCTCC
ITT01_0057_B08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxctTTTACTGGTGGCCTCC
HTMT1_0141_E11.b :                     ttttttgggacggtxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0011_B03.b :                                                             


20110601C-014556 : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
                   ---------+---------+---------+---------+---------+---------+ 89
THY01_0015_A12.b : CCGGTATCCAGCCGACCCGGCCGGGTAGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
DCI01_0038_E04.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
LNG01_0021_D12.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
ITT01_0057_B08.b : CCGGTATCCAGCCGACCCGGCCGGGTGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
HTMT1_0141_E11.b : xxxxxxxxxxxxxxxxxxxxxxxxxgGGACCCTTAGCTGGCGCCGGCTCCGGGAAGCCTA
DCI01_0011_B03.b :                                                             


20110601C-014556 : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
                   ---------+---------+---------+---------+---------+---------+ 149
THY01_0015_A12.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
DCI01_0038_E04.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
LNG01_0021_D12.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
ITT01_0057_B08.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
HTMT1_0141_E11.b : GAGAAGGGGAGGGGCGGACTCAGCTGGAGCTGAGCATCGTCCGGGTGGGCTGAGAGGCCG
DCI01_0011_B03.b :                                         nnnnccgatacaaxxxxxxx


20110601C-014556 : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
                   ---------+---------+---------+---------+---------+---------+ 209
THY01_0015_A12.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
DCI01_0038_E04.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
LNG01_0021_D12.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
ITT01_0057_B08.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
HTMT1_0141_E11.b : TGGCCTCTCCGTTCGAAGCACCACCTGTCGCGGGGCGAGACTTGTGGTGAGAGAAATGAT
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014556 : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
                   ---------+---------+---------+---------+---------+---------+ 269
THY01_0015_A12.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAC
DCI01_0038_E04.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
LNG01_0021_D12.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
ITT01_0057_B08.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
HTMT1_0141_E11.b : GTTGTCCAGATTTAAAATAGTTGCCACTCCTTGTACTCTAGCATGTCGTCATTTGCACAT
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx


20110601C-014556 : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
                   ---------+---------+---------+---------+---------+---------+ 329
THY01_0015_A12.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
DCI01_0038_E04.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
LNG01_0021_D12.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
ITT01_0057_B08.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
HTMT1_0141_E11.b : AAAAGAGAAAGGCAAGCCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC
DCI01_0011_B03.b : xxxxxxxxxxxxxxxxxCACTTATGTTGAACCCAAGAACAAACAAGGGAATGGCATTTAC


20110601C-014556 : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
                   ---------+---------+---------+---------+---------+---------+ 389
THY01_0015_A12.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
DCI01_0038_E04.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
LNG01_0021_D12.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
ITT01_0057_B08.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
HTMT1_0141_E11.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA
DCI01_0011_B03.b : ATTACAGGAACGACAAATGCTGGGTCTTCAAGGACTTCTCCCTCCCAAAATAGAGACACA


20110601C-014556 : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
                   ---------+---------+---------+---------+---------+---------+ 449
THY01_0015_A12.b : AGATATTCAAGCTTTACGATTCCATAGAAATGTGAAAAAGTTGAATGGCCCTTTGGAAAA
DCI01_0038_E04.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
LNG01_0021_D12.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
ITT01_0057_B08.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
HTMT1_0141_E11.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGCTGAATGGCCCTTTGGAAAA
DCI01_0011_B03.b : AGATATTCAAGCTTTACGATTCCATAGAAACGTGAAAAAGTTGAATGGCCCTTTGGAAAA


20110601C-014556 : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
                   ---------+---------+---------+---------+---------+---------+ 509
THY01_0015_A12.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
DCI01_0038_E04.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
LNG01_0021_D12.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
ITT01_0057_B08.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
HTMT1_0141_E11.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA
DCI01_0011_B03.b : ATACATCTATATAATGGGAATTCAAGAAAGAAATGAGAAGTTGTTTTATAGAATACTGCA


20110601C-014556 : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
                   ---------+---------+---------+---------+---------+---------+ 569
THY01_0015_A12.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
DCI01_0038_E04.b : AGATGATATTGAAACTCCTATGCCAATTGTATATACACCCACAGTTGGTCTTGCCTGTTC
LNG01_0021_D12.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
ITT01_0057_B08.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
HTMT1_0141_E11.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC
DCI01_0011_B03.b : AGATGATATTGAAACTCTAATGCCAATTGTATATACACCAACAGTTGGTCTTGCCTGTTC


20110601C-014556 : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
                   ---------+---------+---------+---------+---------+---------+ 629
THY01_0015_A12.b : CCAGTATGGACGCATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
DCI01_0038_E04.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
LNG01_0021_D12.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
ITT01_0057_B08.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
HTMT1_0141_E11.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG
DCI01_0011_B03.b : CCAGTATGGACACATCTTTAGAAGACCCAAGGGATTATTTATTTCAATCTCAGACAGAGG


20110601C-014556 : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
                   ---------+---------+---------+---------+---------+---------+ 689
THY01_0015_A12.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
DCI01_0038_E04.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAAGCTGTTGTGGTGAC
LNG01_0021_D12.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
ITT01_0057_B08.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTATGGTGAC
HTMT1_0141_E11.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC
DCI01_0011_B03.b : TCATGTTAGATCAATTGTGGATAACTGGCCAGAAAATCATGTTAAGGCTGTTGTGGTGAC


20110601C-014556 : TGATGGAGAGA*GAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
                   ---------+---------+---------+---------+---------+---------+ 748
THY01_0015_A12.b : TGATGGAGAGA**GATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGNANTNCAG
DCI01_0038_E04.b : TGATGNAAAAGAGATTTCTGGGTCTGGGAGATCTGGGTGTCTATGAAATGGA*ATTTCCG
LNG01_0021_D12.b : TGATGGAGAGA*GAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
ITT01_0057_B08.b : TGATGGAGAGA*GAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
HTMT1_0141_E11.b : TGATGGAGAGA*GAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG
DCI01_0011_B03.b : TGATGGAGAGA*GAATTCTGGGTCTTGGAGATCTGGGTGTCTATGGAATGGGAATTCCAG


20110601C-014556 : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
                   ---------+---------+---------+---------+---------+---------+ 808
THY01_0015_A12.b : TANGAAAACTATGTTTGTATACAGCTTGTGCAGGGATACGGCCTGATAGATGTCTGCCTG
DCI01_0038_E04.b : TAGGAAAACTATGTTTGTATACAcctgggccggataacgcctggaaaatgccggcctggg
LNG01_0021_D12.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
ITT01_0057_B08.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
HTMT1_0141_E11.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG
DCI01_0011_B03.b : TAGGAAAACTATGTTTGTATACAGCTTGTGCAGGAATACGGCCTGATAGATGTCTGCCTG


20110601C-014556 : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
                   ---------+---------+---------+---------+---------+---------+ 868
THY01_0015_A12.b : TGTGTATTGATGTAAGAACCGATTATCCAGCACTCCTAAAAGACCatttaactgggctta
DCI01_0038_E04.b : ggatgatgtagaacccaatatcccccctcttaaaagacccttttactgggccttattcca
LNG01_0021_D12.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGAACCATTTTACTTGGGCT
ITT01_0057_B08.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
HTMT1_0141_E11.b : TGTGTATTGATGTANGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT
DCI01_0011_B03.b : TGTGTATTGATGTAGGAACCGATAATCCAGCACTCTTAAAAGACCCATTTTACATGGGCT


20110601C-014556 : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCTAATTGATGAATTTATGAAGG
                   ---------+---------+---------+---------+---------+---------+ 928
THY01_0015_A12.b : tatcan                                                     
DCI01_0038_E04.b : aaagaaatccatccaccctttggaggatccaattgggaatttttgaggcccttactgaag
LNG01_0021_D12.b : TATATCAAAAAAGAGATCGATCACAGCGTTTTGATGATTTAATTGATGAATTTtttaaag
ITT01_0057_B08.b : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCNTATTGATGAATTTATNGAAG
HTMT1_0141_E11.b : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCTAATTGATGAATTTATGAAGG
DCI01_0011_B03.b : TATATCAGAAAAGAGATCGATCACAGCGTTATGATGATCTAATTGATGAATTTATGAAGG


20110601C-014556 : CCATTACTGACAGATATGGACGGAACATACTTATTCAGTTTGAAGACTTTGGAAATCATA
                   ---------+---------+---------+---------+---------+---------+ 988
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : aacgggacggaaattctttttcgttttgaaaatttggaatcctatgccttccggttcttg
LNG01_0021_D12.b : gcccttactggacaaatatggacggaacatactttattcattttgaaaaactttggaaat
ITT01_0057_B08.b : GCATTACTGACAGATATGGACGGAACATACTTATTCAGTTTGAgactttggnaatcatat
HTMT1_0141_E11.b : CCATTACTGACAGATATGGACGGGACATACTTATTCAGTTTGAagactttgggaatcata
DCI01_0011_B03.b : CCATTACTGACAGATATGGACGGAACATACTTATTCAGTTTGAAGACTTTGGAAATCATA


20110601C-014556 : ATGTATTCAGGTTCTTGAGAAAAATACGAGAAAATATTGTACCCTTCATGACAATATTCA
                   ---------+---------+---------+---------+---------+---------+ 1048
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : aaaaatccggaaaaatttggaccccaggaaaatttcaggggacctgcgaaacctactgtc
LNG01_0021_D12.b : cataatggatttcgggttccttgaaaaaaatacccgaaaaaaaaatttttgtacctttcc
ITT01_0057_B08.b : gcattcaggttctgagaaataccgagaaaaatatgtacctcaatgacgatattcagggac
HTMT1_0141_E11.b : atgcattcaagttcttgagaaaataccgagaaaaatattgtacctttcatgaacatattc
DCI01_0011_B03.b : ATGTATTCAGGTTCTTGAGAAAAATACGAGAAAATATTGTACCCTTCATGACAATATTCA


20110601C-014556 : AGGGACAGCTGCAGTAGCTCTAGCTGGTCTGCTTGCAGCCCAAAAAGTTATGGTAAATCC
                   ---------+---------+---------+---------+---------+---------+ 1108
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : tgttggccccaaagtttgtgtaatcccctccaaccaattttttttttgggggaagggccc
LNG01_0021_D12.b : aatgaacaatattttaaggggaacagcctgcccctttaaccttcttactttgggtccttg
ITT01_0057_B08.b : gctgcagtactctagctgtctgctgcagccnnaaagtattggtaaatcatctagacccaa
HTMT1_0141_E11.b : aagggacagctgcantacctctagctggtctgcttgcagcccaaaagttattggtaaatc
DCI01_0011_B03.b : AGGGACAGCTGCAGTAGCTCTAGCTGGTCTGCTTGCAGCCCAAAAAGTTATGGTAAATCC


20110601C-014556 : ATCTCAGAACACAAAATCTTATTTC...................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : tgaatcaactctattggccggggaaggccccccgaaaacccaaaaattggggggactggt
LNG01_0021_D12.b : cctttgcacaccccccaaaaaaaattttttttttgtgggtaaaaattctcccctttcctt
ITT01_0057_B08.b : tcttattctgnaacggagagctgcctggatgccatctaaanttgcctggnaaaaggcccc
HTMT1_0141_E11.b : cttctaaaacacaaaatttatttcttggacgggaaaggctgccctggtattcaatcttta
DCI01_0011_B03.b : ATCTCAGAACACAAAATCTTATTTCttgnaacggaaaagctgctcttgnaattgcaatct


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : ttttttgggggaaaaaaaaattagaggtttccccccaaattgtattgaggaaaatatcct
LNG01_0021_D12.b : ccccaaaaaaaaacaaaaaaaaaaaaaaatttct                         
ITT01_0057_B08.b : tcgaaaactcaaaaattggtgttacanttgtttatttaggggaagtaaaaaatttggacg
HTMT1_0141_E11.b : atttggcttgggaaaaaaggcctccgaaaaaaccccaaaaaatgggaggtgaaatttggt
DCI01_0011_B03.b : tataattaggctatgtaaaaaatggctctcggagaagagccaaagaaaattggatgttga


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b : caatggggggggcctttctttaccg                                  
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b : tgtcccccccaaattcgaattaaggaaactacctccaatgggtggggccttccatgaagc
HTMT1_0141_E11.b : ttttttaggggggaagactaaaaaagtcttgggacgttggcctccccccaaaatttcgaa
DCI01_0011_B03.b : cagttggtttatattnaggggcggagctaaataacgtcatcagaccgttgctcccagcca


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b :                                                             
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b : ggtatgggttttttttcccggggccaaaaacaaagttttttttttgagggggnnnnnnnn
HTMT1_0141_E11.b : tttaaagggaattttttcccctccaatgggttggggcggccttttctattgtacaaccgg
DCI01_0011_B03.b : aaaacatctgaaatttgagagcataattactaacctcacaaaatggatgcggactgccac


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b :                                                             
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
HTMT1_0141_E11.b : gtatagaggcgttattgttattccccgggggttggcaaaaacctctaggggtttttgggc
DCI01_0011_B03.b : tttccctagtaacagcttgcgatcatgaagccaaattgttatactcagccggtagttccc


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b :                                                             
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn      
HTMT1_0141_E11.b : cttcgcaacaggggtttccagaaatatttttttttttccccaattttgggggcaaaaaga
DCI01_0011_B03.b : aaacatacttcaggagtttttcggggcttggccaacaggggggttccggggaagaaattt


20110601C-014556 : ............................................................
                   ---------+---------+---------+---------+---------+---------+ 1133
THY01_0015_A12.b :                                                             
DCI01_0038_E04.b :                                                             
LNG01_0021_D12.b :                                                             
ITT01_0057_B08.b :                                                             
HTMT1_0141_E11.b : ttggatctcatttaat                                           
DCI01_0011_B03.b : cggttttttttcacccaaaattttgggcgccattaaaaaggagctccttttttt