[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-014692
Length:
911
Sequence:
[FASTA format sequence]
GCCGCTGCTG TTTCGGGGTG GTGAGTGTCA GTGGGCCCTG GCGACTTTTC TAGGTCAGTT
TTCGTTGCAG ACGCTCGAGT GCCTGCTGTT TCGGGGTGGG CGATGGCCAC CCAGGATGCC
ACCCCAAGTA GCCAGTGGGA GGGAAGCAAT GCTTTGGACC TGCCATCCGC TTGTGACATA
AGGGATTACG TGTTGCAGAG ACCCAGCCAG GAGGCCAGCA GCGAGGCTTT CAGTTCTGAG
GAAGCCCTTT CATTTCCTTG CTCTTCTGAT GTGGATCCAG ACACCAGTAA CCTAAATACT
GAACAGAGTG ATTCCTGGAC CTCTGAGAAC TTCTGGCTTA ACCATCCTGT GAAGGGCTGG
CCAGAGACCC AGACAGAGGA TGATGGACTT CGGGAATCTC TGGATAGATT CTATGAAGTG
TTTGGCCATT CTCAGCCAGC CTCTGGAAAT CCACTCTCCA CATCTGTCTG CCAGTGCCTG
TCTCAGAAAA TCAGCGAACT GAAGAGCCAG GGGAACCAAG AGTACACCCT CCGTAGTTTT
CAACTGGCCC GGGTCATCTT CAACCGGGAC GGCTGCTCCG TCCTACAGAG GCATTCCAGG
GACGCTCACT TCTGCCCACC AGGAGAAGGA GAAGAAAGTG CATCTCTGGA GGATGGAAAA
CTGACCCCAG GACTTTCAAA AGATATCATT CACTTTCTCT TGCAGCAGAA CGTGATGAAA
GACCTATAAC TGGTGCCTGG TGGTGAGAGC AGGCACTTGG AGGGGAGCCC AGAGGCGGAT
ACTGTTGGTG CTCCACCCAG AAGTTCTCAG GCCAAGTAAA TGCTTTGCAA GAGAAGGCTG
GCATCTGCGA TCTGGTCCAG GACAAGTTCA GCCCAAATGG AGAACCAGCA GTGTCTGGGA
TTCTGTTGCC T
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | C20orf196 | hypothetical protein LOC149840 [Homo sapiens]. | 271 | 6e-73 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | 1110034G24Rik | hypothetical protein LOC73747 [Mus musculus]. | 217 | 9e-57 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | LOC608712 | PREDICTED: hypothetical protein XP_845821 [Canis familiaris]. | 285 | 3e-77 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
![]() |
![]() | C13H20orf196 | hypothetical protein LOC615129 [Bos taurus]. | 301 | 5e-82 | O |
Locus | Definition | Score | E value | FL |
---|
|
|
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0048_D12.b : gtttttttttttttagcatagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0115_F01.b :
MLTL1_0081_D06.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxx
LVRM1_0139_F07.b :
BFLT1_0075_D08.b :
20110601C-014692 : ......................................GCCGCTGCTGTTTCGGGGTGGT
---------+---------+---------+---------+---------+---------+ 22
LVR01_0048_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCCGCTGCTGTTTCGGGGTGGT
BFLT1_0115_F01.b : ntttccgttagctgtgg
MLTL1_0081_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0139_F07.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxx
BFLT1_0075_D08.b : aaacgttagcgnacgxxxxxxxxx
20110601C-014692 : GAGTGTCAGTGGGCCCTGGCGACTTTTCTAGGTCAGTTTTCGTTGCAGACGCTCGAGTGC
---------+---------+---------+---------+---------+---------+ 82
LVR01_0048_D12.b : GAGTGTCAGTGGGCCCTGGCGACTTTTCTAGGTCAGTTTTCGTTGCAGACGCTCGAGTGC
BFLT1_0115_F01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgccg
MLTL1_0081_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0139_F07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcatggggcctccgcttccggttggaagcc
BFLT1_0075_D08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxccttgttccggttggaagcc
20110601C-014692 : CTGCTGTTTCGGGGT*GGGCGATGGCCACCCAGGATGCCACCCCAAGTAGCCAGTGGGAG
---------+---------+---------+---------+---------+---------+ 141
LVR01_0048_D12.b : CTTGAATTGGGGGAAAGGGCGATGGCCACCCAGGATGCCACCCCAGGTAGCCAGTGGGAG
BFLT1_0115_F01.b : CTGCTGTTTCGGGGT*GGGCGATGGCCACCCAGGATGCCACCCCAAGTAGCCAGTGGGAG
MLTL1_0081_D06.b : CTGCTGTTTCGGGGT*GGGCGATGGCCACCCAGGATGCCACCCCAAGTAGCCAGTGGGAG
LVRM1_0139_F07.b : gctgctgtttcggggtGGGCGATGGCCACCCAGGATGCCACCCCAAGTAGCCAGTGGGAG
BFLT1_0075_D08.b : gctgctgtttcggggtGGGCGATGGCCACCCAGGATGCCACCCCAAGTAGCCAGTGGGAG
20110601C-014692 : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
---------+---------+---------+---------+---------+---------+ 201
LVR01_0048_D12.b : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
BFLT1_0115_F01.b : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
MLTL1_0081_D06.b : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
LVRM1_0139_F07.b : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
BFLT1_0075_D08.b : GGAAGCAATGCTTTGGACCTGCCATCCGCTTGTGACATAAGGGATTACGTGTTGCAGAGA
20110601C-014692 : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
---------+---------+---------+---------+---------+---------+ 261
LVR01_0048_D12.b : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
BFLT1_0115_F01.b : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
MLTL1_0081_D06.b : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
LVRM1_0139_F07.b : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
BFLT1_0075_D08.b : CCCAGCCAGGAGGCCAGCAGCGAGGCTTTCAGTTCTGAGGAAGCCCTTTCATTTCCTTGC
20110601C-014692 : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
---------+---------+---------+---------+---------+---------+ 321
LVR01_0048_D12.b : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
BFLT1_0115_F01.b : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
MLTL1_0081_D06.b : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
LVRM1_0139_F07.b : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
BFLT1_0075_D08.b : TCTTCTGATGTGGATCCAGACACCAGTAACCTAAATACTGAACAGAGTGATTCCTGGACC
20110601C-014692 : TCTGAGAACTTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
---------+---------+---------+---------+---------+---------+ 381
LVR01_0048_D12.b : TCTGAGAACTTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
BFLT1_0115_F01.b : TCTGAGAACTTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
MLTL1_0081_D06.b : TCTGAGAACCTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
LVRM1_0139_F07.b : TCTGAGAACTTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
BFLT1_0075_D08.b : TCTGAGAACTTCTGGCTTAACCATCCTGTGAAGGGCTGGCCAGAGACCCAGACAGAGGAT
20110601C-014692 : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
---------+---------+---------+---------+---------+---------+ 441
LVR01_0048_D12.b : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
BFLT1_0115_F01.b : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
MLTL1_0081_D06.b : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
LVRM1_0139_F07.b : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
BFLT1_0075_D08.b : GATGGACTTCGGGAATCTCTGGATAGATTCTATGAAGTGTTTGGCCATTCTCAGCCAGCC
20110601C-014692 : TCTGGAAATCCACTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
---------+---------+---------+---------+---------+---------+ 501
LVR01_0048_D12.b : TCTGGAAATCCACTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
BFLT1_0115_F01.b : TCTGGAAATCCACTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
MLTL1_0081_D06.b : TCTGGAAATCCGCTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
LVRM1_0139_F07.b : TCTGGAAATCCACTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
BFLT1_0075_D08.b : TCTGGAAATCCACTCTCCACATCTGTCTGCCAGTGCCTGTCTCAGAAAATCAGCGAACTG
20110601C-014692 : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
---------+---------+---------+---------+---------+---------+ 561
LVR01_0048_D12.b : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
BFLT1_0115_F01.b : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
MLTL1_0081_D06.b : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
LVRM1_0139_F07.b : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
BFLT1_0075_D08.b : AAGAGCCAGGGGAACCAAGAGTACACCCTCCGTAGTTTTCAACTGGCCCGGGTCATCTTC
20110601C-014692 : AACCGGGACGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
---------+---------+---------+---------+---------+---------+ 621
LVR01_0048_D12.b : AACCGGGATGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
BFLT1_0115_F01.b : AACCGGGACGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
MLTL1_0081_D06.b : AACCGGGATGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
LVRM1_0139_F07.b : AACCGGGACGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
BFLT1_0075_D08.b : AACCGGGACGGCTGCTCCGTCCTACAGAGGCATTCCAGGGACGCTCACTTCTGCCCACCA
20110601C-014692 : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCAAAA
---------+---------+---------+---------+---------+---------+ 681
LVR01_0048_D12.b : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCCAAA
BFLT1_0115_F01.b : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCAAAA
MLTL1_0081_D06.b : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCCAAA
LVRM1_0139_F07.b : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCCAAA
BFLT1_0075_D08.b : GGAGAAGGAGAAGAAAGTGCATCTCTGGAGGATGGAAAACTGACCCCAGGACTTTCAAAA
20110601C-014692 : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACCTATAACTGGTGCCTGGT
---------+---------+---------+---------+---------+---------+ 741
LVR01_0048_D12.b : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACTTATAACTGGTGCCTGGT
BFLT1_0115_F01.b : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACCTATAACTGGTGCCTGGT
MLTL1_0081_D06.b : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACCTATAACTGGTGCCTGGT
LVRM1_0139_F07.b : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACCTATAACTGGTGCCTGGT
BFLT1_0075_D08.b : GATATCATTCACTTTCTCTTGCAGCAGAACGTGATGAAAGACCTATAACTGGTGCCTGGT
20110601C-014692 : GGTGAGAGCAGGCACTTGGAGGGGAGCCCAGAGGCGGATACTGTTGGTGCTCCACCCAGA
---------+---------+---------+---------+---------+---------+ 801
LVR01_0048_D12.b : GGTGAGAGCAGGCACTTGGAGGGGAGCCCAGAGGCGGATACTGTTGGTGCTCCACCC***
BFLT1_0115_F01.b : GGTGAGAGCAGGCACTTGGAGGGGAGCCCAGAGGCGGATACTGTTGGTGCTCCACCCAGA
MLTL1_0081_D06.b : GGTGAGAGCANGCACTTGGAGGGGAGCCCAGANGCGGATACTGTTGGTGCTCCACCC***
LVRM1_0139_F07.b : GGTGAGAGCAGGCACTTGGAGGGGAGCCCAGAGGCGGATACTGTTGGTGCTCCACCCAGt
BFLT1_0075_D08.b : GGTGAGAGCAGGCACTTGGAGGGGAGCCCAGAGGCGGATACTGTTGGTGCTCCACCCAAA
20110601C-014692 : AGTTCTCAGGCCAAGTAAATGCTTTGCAAGAGAAGGCTGGCATCTGCGATCTGGTCCAGG
---------+---------+---------+---------+---------+---------+ 861
LVR01_0048_D12.b : AGTTCTCANGCCAAGTAAATGCTTTGCAAGAGAAGGCTGGCATCTGCGATCTGGTCCagg
BFLT1_0115_F01.b : AGTTCTCAGGCCAAGTAAATGCTTTGNCAGAGAAGGCTGGCATCTGCGATCTGGTCCAGG
MLTL1_0081_D06.b : AGTTCTCAGGCCAAGTAAATGCTTTGCAAGAGAAGGCTGGCATCTGCGATCTGGTCCcag
LVRM1_0139_F07.b : tctcangccaa
BFLT1_0075_D08.b : AGTTCTCAGGCCAAGTAAATGCTTTGCAAGAGAAGGCTGGCATCTGCGATCTGGTCCAGG
20110601C-014692 : ACAAGTTCAGCCCAAATGGAGAACCAGCAGTGTCTGGGATTCTGTTGCCT..........
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b : agcaagttcagccccaatggaaaaaccagcagtgtctgggattctgttggcctccatggg
BFLT1_0115_F01.b : AGCAGTTCAGCCCCAATGGAGAACCAGCAGTGTCTGGGATTCTGTTtgctcatgggcacc
MLTL1_0081_D06.b : agcagttcagcccaatgganaaacagcagtgtctggaattctgtgcctccatggncaccc
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ACAAGTTCAGCCCAAATGGAGAACCACCAGTGTCTGGGATTCTGTTGCCTccatggcccc
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b : ccaccctacctcccacccccccctatgaacctaagggccagtggaccgactaattttggg
BFLT1_0115_F01.b : cctactcccaccaccctaagacctaaggccagtgaccgactagtttgggagtccaaagcc
MLTL1_0081_D06.b : ctactccacccacctatgacctaaggcagtgaccgactaattgggagtcaaaagcctggc
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ctacttcccacccacctatgacctaaggccatgaccgactagtttgggaatccaaaacct
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b : gaatcccaaaagccctg
BFLT1_0115_F01.b : ctgcctgcttggctccaggaagggcagctctgaggcttaattcagtcaaaatctccctcc
MLTL1_0081_D06.b : tgccttgctccagggcagcactctgagcataattcagttcaatcccccctctgatgaaac
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ggctgctttgcctcaaggaaaggcagcctctgaggcatatttcagttcaaaaccccccct
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : tgaagaaaccagggcgggctttcaataaactcatcctgcggggcccctcccttccttggc
MLTL1_0081_D06.b : caggtggggttccatgaaccccttctgccggggcctcctttcctgctccttcccaatggg
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ctggatgaaaccaggctggggcttcaatgaaaacctcattttgccgggcccctccctttc
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : ttcttcccaaatggctctttgggacccttcctataaaccttggggcaatcccttttggaa
MLTL1_0081_D06.b : ccttggggaccttcttaaaacctttagccaaatctttggagaccggctaaaaaagatctc
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ctggctctcttcccaaattgggcctccgggaacccttcctataaaatctttgggggcaaa
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : ccctgattaaaaacagggctccgtttaagctttttttggaaaaaacccccccgggcccgt
MLTL1_0081_D06.b : ttgatgttttttggataaacccacgagcaaaagttttttttaaactccccgttaaaatat
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ctccttttggacaccctgattaaaaaacgggcttccgttgaagcttttttgggaattaag
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : taaaatttttcctttaaaattccccttttataaatttccccaaatccctctggccctgtt
MLTL1_0081_D06.b : ccatctcctgcccataaaaccaaaacaaatggtgccccccccaaaaaagcccccgggagg
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : ccctcaccgaccggttaaaatttctcgtgttaaatggcaccggatagaaatttcccgaat
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : aaaaacacaaaaccaatgtggtgtgccccccctccccgggaaaacgccccccccctgggg
MLTL1_0081_D06.b : aaacattgttgggcccaccccccccccgaaaaaanaccannnnnnttttttataccaaaa
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : cttttttgccaggggtgaaacacaaaaaaaaggttgggttcccccgcctcccagaaaaaa
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b : atttacaccctctttttttgttttggagaaaaact
MLTL1_0081_D06.b : ctaaaggnnnnnnnnnnnnnnnnnnnnnc
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : tcggtcccacctgggtatacaaacccaattgtttttgtttggagaaacctcttataccgg
20110601C-014692 : ............................................................
---------+---------+---------+---------+---------+---------+ 911
LVR01_0048_D12.b :
BFLT1_0115_F01.b :
MLTL1_0081_D06.b :
LVRM1_0139_F07.b :
BFLT1_0075_D08.b : gcacattggggacaaaa