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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014700

Length: 1,244

Sequence [FASTA format sequence]
GATTAATGAA TTGGTGGGAG GCGCTCTCTC ATCTTAGTTC GGTCTTCCTC CGTGGGAGGG
GACGACCGGC CTGGGGTGTG GGGGATTGGA CCTTCCTTGT CCCTCCCCAA TGGAACAAAG
ACCTGGCCTT ACCCATTTTT CCTGCCATCG CCGGCTGACT TTGTGACCGA GGGGCCGTCG
GGGCCGCCCT GCGCACCCCT CGCCCCCGCC CCGGGCGCGC CTCCCGCAGC TGCAGACCCG
GTGGCAGAAG TCCAGCACCA AGATGACTGA GCGCTTCGAC TGTCACCACT GTGAGAACTC
CCTCTTCGGC CGGAAGTATG TCCTGCGGGA GGAGCAGCCC TACTGCGTGG GCTGCTTCGA
GGCCCTCTTC GCCAGCACAT GCGAGGAGTG TGGGAAGCTG ATTGGATGCG ACTGCAAGGA
CTTATCCTAC AAGGACCGGC ACTGGCACGA GGCCTGCTTC CACTGCTCAC GATGCAGGAG
CTCCCTCGTG GACAAGCCAT TTGCTGCCAA GGAGGACCAG GTGCTCTGCA CTGACTGCTA
CTCGCAGGAG TACTCATCCC GCTGCCAGGA GTGCAGGAAG GCCATCATGC CAGGCACCCG
CAAGATGGAA TACAAGGGCA GCAGCTGGCA CGAGACCTGC TTCACCTGCC ACCGCTGCCA
GCAGCCCATT GGGACCAAGA GCTTCATCCC TAAGGACGGC CAGAACTTCT GTGTGCCCTG
CTATGAGAAG CAGCACGCCT TGCAGTGCAT TCAGTGCAAA AAGCCCATCA CCAGCGGGGG
CGTCACGTAC CGTGAGCAGC CCTGGCACAG GGAGTGCTTC GTGTGCACCG CCTGCAAGAA
GCCACTGTCC GGCCAGCGCT TCACGTCCCG TGACGAGTTC GCCTACTGCC TGGGCTGCTT
CTGCGACCTG TACGCCAAGA AGTGTACAGG CTGCGCCAAC CCCATCAGTG CTTTCTAAAG
ATATGCAGTA TGATACAATG ATCGGCTATG CAGCAGAAAA ATCTGGTTGA ACTCAAGTCC
CACCTACGCA GAGCATCTGT GAAGCCGGTT TCNTTATCTG AGTGCTGGTC ACTGTGAGAA
ATGCTTGATT GTGGCTGAAA CGGGCCTCTG GCTGTATGGT CTGTTTTGCC TGGAGCTTTG
CTCAAAAAAA AATACCACCA CCCCCCTCCA CTTGNTAGTT GCTTTGCTGG GCTCTATTNA
TGATATAAAG GTAATGCATT CTTGCAATGT GCTTTTTAAA TAAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFHL2four and a half LIM domains protein 2 [Homo sapiens]. 473e-133O
Contig/Assembly ProteinFHL2four and a half LIM domains protein 2 [Homo sapiens]. 473e-133O
Contig/Assembly ProteinFHL2four and a half LIM domains protein 2 [Homo sapiens]. 473e-133O
Contig/Assembly ProteinFHL2four and a half LIM domains protein 2 [Homo sapiens]. 473e-133O
Contig/Assembly ProteinFHL5four and a half LIM domains protein 5 [Homo sapiens]. 3156e-86O
Contig/Assembly ProteinFHL5four and a half LIM domains protein 5 [Homo sapiens]. 3156e-86O
Contig/Assembly ProteinFHL3four and a half LIM domains protein 3 isoform 1 [Homo sapiens]. 3132e-85O
Contig/Assembly ProteinFHL1four and a half LIM domains protein 1 isoform 2 [Homo sapiens]. 2762e-74O
Contig/Assembly ProteinFHL1four and a half LIM domains protein 1 isoform 2 [Homo sapiens]. 2762e-74O
Contig/Assembly ProteinFHL1four and a half LIM domains protein 1 isoform 2 [Homo sapiens]. 2762e-74O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFhl2four and a half LIM domains protein 2 [Mus musculus]. 458e-129O
Contig/Assembly ProteinFhl5four and a half LIM domains protein 5 [Mus musculus]. 3172e-86O
Contig/Assembly ProteinFhl3four and a half LIM domains protein 3 [Mus musculus]. 3123e-85O
Contig/Assembly ProteinFhl1four and a half LIM domains protein 1 isoform 3 [Mus musculus]. 2757e-74O
Contig/Assembly ProteinFhl1four and a half LIM domains protein 1 isoform 2 [Mus musculus]. 2757e-74O
Contig/Assembly ProteinFhl1four and a half LIM domains protein 1 isoform 1 [Mus musculus]. 2723e-73O
Contig/Assembly ProteinFhl4four and a half LIM domains 4 [Mus musculus]. 2694e-72O
Contig/Assembly ProteinPxnpaxillin isoform alpha [Mus musculus]. 1311e-30
Contig/Assembly ProteinPxnpaxillin isoform beta [Mus musculus]. 1311e-30
Contig/Assembly ProteinLims1LIM and senescent cell antigen-like-containing domain protein 1 isoform 3 [Mus musculus]. 1142e-25


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC474544PREDICTED: similar to four and a half LIM domains 2 isoform 1 [Canis familiaris]. 484e-137
Contig/Assembly ProteinLOC475000PREDICTED: similar to activator of cAMP-responsive element modulator (CREM) in testis [Canis familiaris]. 3249e-89O
Contig/Assembly ProteinLOC608080PREDICTED: similar to four and a half LIM domains 3 [Canis familiaris]. 3157e-86O
Contig/Assembly ProteinLOC492162PREDICTED: similar to four and a half LIM domains 1 isoform 6 [Canis familiaris]. 2781e-74O
Contig/Assembly ProteinLOC492162PREDICTED: similar to four and a half LIM domains 1 isoform 5 [Canis familiaris]. 2781e-74O
Contig/Assembly ProteinLOC492162PREDICTED: similar to Four and a half LIM domains protein 1 (FHL-1) (Skeletal muscle LIM-protein 1) (SLIM 1) (SLIM) isoform 1 [Canis familiaris]. 2755e-74O
Contig/Assembly ProteinLOC492162PREDICTED: similar to four and a half LIM domains 1 isoform 3 [Canis familiaris]. 1896e-48O
Contig/Assembly ProteinLOC492162PREDICTED: similar to Four and a half LIM domains protein 1 (FHL-1) (Skeletal muscle LIM-protein 1) (SLIM 1) (SLIM) (KyoT) (RBP associated molecule 14-1) (RAM14-1) isoform 4 [Canis familiaris]. 1595e-39O
Contig/Assembly ProteinLOC486299PREDICTED: similar to Paxillin [Canis familiaris]. 1303e-30
Contig/Assembly ProteinLOC612895PREDICTED: similar to LIM and senescent cell antigen-like domains 2 [Canis familiaris]. 1159e-26O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinFHL2four and a half LIM domains protein 2 [Bos taurus]. 497e-141O
Contig/Assembly ProteinFHL5four and a half LIM domains protein 5 [Bos taurus]. 3162e-86O
Contig/Assembly ProteinFHL3four and a half LIM domains protein 3 [Bos taurus]. 3118e-85O
Contig/Assembly ProteinFHL1four and a half LIM domains 1 isoform 1 [Bos taurus]. 2772e-74O
Contig/Assembly ProteinFHL1four and a half LIM domains 1 isoform 2 [Bos taurus]. 2772e-74O
Contig/Assembly ProteinFHL1four and a half LIM domains 1 isoform 3 [Bos taurus]. 1881e-47O
Contig/Assembly ProteinPXNPREDICTED: paxillin-like [Bos taurus]. 1289e-30
Contig/Assembly ProteinPXNPREDICTED: paxillin-like [Bos taurus]. 1289e-30
Contig/Assembly ProteinLIMS2LIM and senescent cell antigen-like-containing domain protein 2 [Bos taurus]. 1141e-25O
Contig/Assembly ProteinLIMS3LLIM and senescent cell antigen-like domains 3-like [Bos taurus]. 1142e-25O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100513532PREDICTED: four and a half LIM domains protein 2-like isoform 2 [Sus scrofa]. 520e-148O
Contig/Assembly ProteinFHL5four and a half LIM domains protein 5 [Sus scrofa]. 3216e-88O
Contig/Assembly ProteinFHL3four and a half LIM domains protein 3 [Sus scrofa]. 3154e-86O
Contig/Assembly ProteinLOC100512841PREDICTED: four and a half LIM domains protein 3-like [Sus scrofa]. 3116e-85O
Contig/Assembly ProteinFHL1Cfour and a half LIM domains 1 protein, isoform C [Sus scrofa]. 2786e-75O
Contig/Assembly ProteinLOC100517009PREDICTED: LIM and senescent cell antigen-like-containing domain protein 2-like isoform 1 [Sus scrofa]. 1141e-25O
Contig/Assembly ProteinLOC100517009PREDICTED: LIM and senescent cell antigen-like-containing domain protein 2-like isoform 2 [Sus scrofa]. 1141e-25O
Contig/Assembly ProteinLIMS1LIM and senescent cell antigen-like domains 1 [Sus scrofa]. 1123e-25O
Contig/Assembly ProteinLDB3PREDICTED: hypothetical protein LOC100151883 [Sus scrofa]. 1071e-23
Contig/Assembly ProteinPRICKLE3PREDICTED: prickle-like protein 3 [Sus scrofa]. 1024e-22


Assembly Members: 4      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
HTMT10008H03HTMT1_0008_H03.b  
LVRM10119B08LVRM1_0119_B08.bBP449422 AK233303
OVR010075E03OVR01_0075_E03.bBW966299 AK347686
PBL010030D12PBL01_0030_D12.bBP155813 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
358C110.500WSTTC/F
T200.500TTT/F
469A110.500WSTCA/S
G200.500TCG/S


Alignment:      TOP

20110601C-014700 : .............GATTAATGAATTGGTGGGAGGCGCTCTCTCATCTTAGTTCGGTCTTC
---------+---------+---------+---------+---------+---------+ 47
HTMT1_0008_H03.b : cccgatatcttagGATTAATGAATTGGTGGGAGGCGCTCTCTCATCTTAGTTCGGTCTTC
OVR01_0075_E03.b :
PBL01_0030_D12.b :
LVRM1_0119_B08.b :
20110601C-014700 : CTCCGTGGGAGGGGACGACCGGCCTGGGGTGTGGGGGATTGGACCTTCCTTGTCCCTCCC
---------+---------+---------+---------+---------+---------+ 107
HTMT1_0008_H03.b : CTCCGTGGGAGGGGACGACCGGCCTGGGGTGTGGGGGATTGGACCTTCCTTGTCCCTCCC
OVR01_0075_E03.b : agcttttggtgcxxxxxxxxxxxxxxxxxxxxx
PBL01_0030_D12.b :
LVRM1_0119_B08.b :
20110601C-014700 : CAATGGAACAAAGACCTGGCCTTACCCATTTTTCCTGCCATCGCCGGCTGACTTTGTGAC
---------+---------+---------+---------+---------+---------+ 167
HTMT1_0008_H03.b : CAATGGAACAAAGACCTGGCCTTACCCATTTTTCCTGCCATCGCCGGCTGACTTTGTGAC
OVR01_0075_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtgacac
PBL01_0030_D12.b : nnaaaagatcaacaxxx
LVRM1_0119_B08.b : tagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-014700 : CGAGGGGCCGTCGGGGCCGCCCTGCGCACCCCTCGCCCCCGCCCCGGGCGCGCCTCCCGC
---------+---------+---------+---------+---------+---------+ 227
HTMT1_0008_H03.b : CGAggggccgtcggggccgccctgcgcacccctcgcccccgccccgggcgcgccTCCCGC
OVR01_0075_E03.b : gcgggttctccgggcggggcgcacctctccccgcggggcagaaatgcccggacctcccgg
PBL01_0030_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtgcccggacctcccgg
LVRM1_0119_B08.b : xxxxxxxxxxxxxxxxgttgggacggttggctcagcagccactgtcccctccagtcaggc
20110601C-014700 : AGCTGCAGACCCGGTGGCAGAAGTCCAGCACCAAGATGACTGAGCGCTTCGACTGTCACC
---------+---------+---------+---------+---------+---------+ 287
HTMT1_0008_H03.b : AGCTGCAGACCCGGTGGCAGAAGTCCAGCACCAAGATGACTGAGCGCTTCGACTGTCACC
OVR01_0075_E03.b : agtgagccgcgCGGTGGCAGAAGTCCAGCACCAAGATGACTGAGCGCTTCGACTGTCACC
PBL01_0030_D12.b : agtgagccgcgCGGTGGCAGAAGTCCAGCACCAAGATGACTGAGCGCTTCGACTGTCACC
LVRM1_0119_B08.b : tgaaaccagccaGGTGGCAGAAGTCCAGCACCAAGATGACTGAGCGCTTCGACTGTCACC
20110601C-014700 : ACTGTGAGAACTCCCTCTTCGGCCGGAAGTATGTCCTGCGGGAGGAGCAGCCCTACTGCG
---------+---------+---------+---------+---------+---------+ 347
HTMT1_0008_H03.b : ACTGTGAGAACTCCCTCTTCGGCCGGAAGTATGTCCTGCGGGAGGAGCAGCCCTACTGCG
OVR01_0075_E03.b : ACTGTGAGAACTCCCTCTTCGGCCGGAAGTATGTCCTGCGGGAGGAGCAGCCCTACTGCG
PBL01_0030_D12.b : ACTGTGAGAACTCCCTCTTCGGCCGGAAGTATGTCCTGCGGGAGGAGCAGCCCTACTGCG
LVRM1_0119_B08.b : ACTGTGAGAACTCCCTCTTCGGCCGGAAGTATGTCCTGCGGGAGGAGCAGCCCTACTGCG
20110601C-014700 : TGGGCTGCTTCGAGGCCCTCTTCGCCAGCACATGCGAGGAGTGTGGGAAGCTGATTGGAT
---------+---------+---------+---------+---------+---------+ 407
HTMT1_0008_H03.b : TGGGCTGCTTTGAGGCCCTCTTCGCCAGCACATGCGAGGAGTGTGGGAAGCTGATTGGAT
OVR01_0075_E03.b : TGGGCTGCTTTGAGGCCCTCTTCGCCAGCACATGCGAGGAGTGTGGGAAGCTGATTGGAT
PBL01_0030_D12.b : TGGGCTGCTTCGAGGCCCTCTTCGCCAGCACATGCGAGGAGTGTGGGAAGCTGATTGGAT
LVRM1_0119_B08.b : TAGGCTGCTTCGAGGCACTCTTCGCCAGCACATGCGAGGAGTGTGGGAAGCTGATTGGAT
20110601C-014700 : GCGACTGCAAGGACTTATCCTACAAGGACCGGCACTGGCACGAGGCCTGCTTCCACTGCT
---------+---------+---------+---------+---------+---------+ 467
HTMT1_0008_H03.b : GCGACTGCAAGGACTTATCCTACAAGGACCGGCACTGGCACGAGGCCTGCTTCCACTGCT
OVR01_0075_E03.b : GCGACTGCAAGGACTTATCCTACAAGGACCGGCACTGGCACGAGGCCTGCTTCCACTGCT
PBL01_0030_D12.b : GCGACTGCAAGGACTTATCCTACAAGGACCGGCACTGGCACGAGGCCTGCTTCCACTGCT
LVRM1_0119_B08.b : GCGACTGCAAGGACTTATCCTACAAGGACCGGCACTGGCACGAGGCCTGCTTCCACTGCT
20110601C-014700 : CACGATGCAGGAGCTCCCTCGTGGACAAGCCATTTGCTGCCAAGGAGGACCAGGTGCTCT
---------+---------+---------+---------+---------+---------+ 527
HTMT1_0008_H03.b : CGCGATGCAGGAGCTCCCTCGTGGACAAGCCATTTGCTGCCAAGGAGGACCAGGTGCTCT
OVR01_0075_E03.b : CGCGATGCAGGAGCTCCCTCGTGGACAAGCCATTTGCTGCCAAGGAGGACCAGGTGCTCT
PBL01_0030_D12.b : CACGATGCAGGAGCTCCCTCGTGGACAAGCCATCTGCTGCCAAGGAGGACCAGGTGCTCT
LVRM1_0119_B08.b : CACGATGCAGGAGCTCCCTCGTGGACAAGCCATTTGCTGCCAAGGAGGACCAGGTACTCT
20110601C-014700 : GCACTGACTGCTACTCGCAGGAGTACTCATCCCGCTGCCAGGAGTGCAGGAAGGCCATCA
---------+---------+---------+---------+---------+---------+ 587
HTMT1_0008_H03.b : GCACTGACTGCTACTCGCAGGAGTACTCATCCCGCTGCCAGGAGTGCAGGAAGGCCATCA
OVR01_0075_E03.b : GCACTGACTGCTACTCGCAGGAGTACTCATCCCGCTGCCAGGAGTGCAGGAAGGCCATCA
PBL01_0030_D12.b : GCACTGACTGCTACTCGCAGGAGTACTCATCCCGCTGCCAGGAGTGCAGGAAGGCCATCA
LVRM1_0119_B08.b : GCACTGACTGCTACTCGCAGGAGTACTCATCCCGCTGCCAGGAGTGCAGGAAGGCCATCA
20110601C-014700 : TGCCAGGCACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCT
---------+---------+---------+---------+---------+---------+ 647
HTMT1_0008_H03.b : TGCCAGGCACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCT
OVR01_0075_E03.b : TGCCAGGCACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCT
PBL01_0030_D12.b : TGCCAGGCACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCT
LVRM1_0119_B08.b : TGCCAGGCACCCGCAAGATGGAATACAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCT
20110601C-014700 : GCCACCGCTGCCAGCAGCCCATTGGGACCAAGAGCTTCATCCCTAAGGACGGCCAGAACT
---------+---------+---------+---------+---------+---------+ 707
HTMT1_0008_H03.b : GCCACCGCTGCCAGCAGCCCATTGGGACCAAGAGCTTCATCCCTAAGGACGGCCAGAACT
OVR01_0075_E03.b : GCCACCGCTGCCAGCAGCCCATTGGGACCAAGAGCTTCATCCCTAAGGACGGCCAGAACT
PBL01_0030_D12.b : GCCACCGCTGCCAGCAGCCCATTGGGACCAAGAGCTTCATCCCTAAGGACGGCCAGAACT
LVRM1_0119_B08.b : GCCACCGCTGCCAGCAGCCCATTGGGACCAAGAGCTTCATCCCTAAGGACGGCCAGAACT
20110601C-014700 : TCTGTGTGCCCTGCTATGAGAAGCAGCACGCCTTGCAGTGCATTCAGTGCAAAAAGCCCA
---------+---------+---------+---------+---------+---------+ 767
HTMT1_0008_H03.b : TCTGTGTGCCCTGCTATGAGAAGCAGCACGCCTTGCAGTGCATTCAGTGCCAAAAGccca
OVR01_0075_E03.b : TCTGTGTGCCCTGCTATGAGAAGCAGCACGCCTTGCAGTGCATTCAGTGCAAAAAGccca
PBL01_0030_D12.b : TCTGTGTGCCCTGCTATGAGAAGCAGCACGCCTTGCAGTGCATTCAGTGCAAAAAGCCCA
LVRM1_0119_B08.b : TCTGTGTGCCCTGCTATGAGAAGCAGCACGCC*TGCAGTGCATTCAGTGCAAAAAGgtac
20110601C-014700 : TCACCAGCGGGGGCGTCACGTACCGTGAGCAGCCCTGGCACAGGGAGTGCTTCGTGTGCA
---------+---------+---------+---------+---------+---------+ 827
HTMT1_0008_H03.b : tcaccagcgggggcgtcacgtaccgtgagcagccctggcacagggagtgcctcctgtgca
OVR01_0075_E03.b : tcaccagcgggggcgtcacgtaccgtgagcagccctggcacagggagtgcttcgtgtgca
PBL01_0030_D12.b : TCACCAGCGGGGGCGTCACGTACCGTGAGCAGCCCTGGCACAGGGAGTGCTTCGTGTGCA
LVRM1_0119_B08.b : cttccccacgccccgcccccgcccttgctcacctgtgtatggcccttgctcaaagggctt
20110601C-014700 : CCGCCTGCAAGAAGCCACTGTCCGGCCAGCGCTTCACGTCCCGTGACGAGTTCGCCTACT
---------+---------+---------+---------+---------+---------+ 887
HTMT1_0008_H03.b : ccgcctgcaaaaaaccactgtccggccagtgcttcacgtcctgggaaaattcgcctactg
OVR01_0075_E03.b : ccgcctgcaagaagccactgta
PBL01_0030_D12.b : CCGCCTGCAAGAAGCCACTGTCCGGCCAGCGCTTCACGTCCCGTGACGAGTTCGCCTACT
LVRM1_0119_B08.b : ggcttgtaagatcaaagggctgaggagtgacacctggcttgccttcgctttcccccttga
20110601C-014700 : GCCTGGGCTGCTTCTGCGACCTGTACGCCAAGAAGTGTACAGGCTGCGCCAACCCCATCA
---------+---------+---------+---------+---------+---------+ 947
HTMT1_0008_H03.b : ctgggctgcttctgcaactgtacgccaaaaaatgaaatgctgccccaacccctcactgga
OVR01_0075_E03.b :
PBL01_0030_D12.b : GCCTGGGCTGCTTCTGCGACCTGTACGCCAAGAAGTGTACAGGCTGCGCCAACCCCATCA
LVRM1_0119_B08.b : ctcttgaggtccctgaaatgggaatcctttctcctttctgcttctagaacatttccaaat
20110601C-014700 : GTGCTTTCTAAAGATATGCAGTATGATACAATGATCGGCTATGCAGCAGAAAAATCTGGT
---------+---------+---------+---------+---------+---------+ 1007
HTMT1_0008_H03.b : atgggccggccctattaactccctttaaaggacggcagtggcacatcctaggcttcactc
OVR01_0075_E03.b :
PBL01_0030_D12.b : GTGCTTTCTAAAGATATGCAGTATGATACAATGATCGGCTATGCAGCAGAAAAATCTGGT
LVRM1_0119_B08.b : att
20110601C-014700 : TGAACTCAAGTCCCACCTACGCAGAGCATCTGTGAAGCCGGTTTCNTTATCTGAGTGCTG
---------+---------+---------+---------+---------+---------+ 1067
HTMT1_0008_H03.b : caagaattgtcctttatacctggggggcgagtcttctttccaaaataacattatcctttt
OVR01_0075_E03.b :
PBL01_0030_D12.b : TGAACTCAAGTCCCACCTACGCAGAGCATCTGTGAAGCCGGTTTCNTTATCTGAGTGCTG
LVRM1_0119_B08.b :
20110601C-014700 : GTCACTGTGAGAAATGCTTGATTGTGGCTGAAACGGGCCTCTGGCTGTATGGTCTGTTTT
---------+---------+---------+---------+---------+---------+ 1127
HTMT1_0008_H03.b : gaccctattggtatagcaaacttgaactctaaggttcactgctcttattatcctccgtga
OVR01_0075_E03.b :
PBL01_0030_D12.b : GTCACTGTGAGAAATGCTTGATTGTGGCTGAAACGGGCCTCTGGCTGTATGGTCTGTTTT
LVRM1_0119_B08.b :
20110601C-014700 : GCCTGGAGCTTTGCTCAAAAAAAAATACCACCACCCCCCTCCACTTGNTAGTTGCTTTGC
---------+---------+---------+---------+---------+---------+ 1187
HTMT1_0008_H03.b : ctcacatcatactcttatattactcttttaacactttactaataatctacttatgtccat
OVR01_0075_E03.b :
PBL01_0030_D12.b : GCCTGGAGCTTTGCTCAAAAAAAAATACCACCACCCCCCTCCACTTGNTAGTTGCTTTGC
LVRM1_0119_B08.b :
20110601C-014700 : TGGGCTCTATTNATGATATAAAGGTAATGCATTCTTGCAATGTGCTTTTTAAATAAA...
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b : tcaccatattatttgttctatctgactgctgtcttatgtctcttcacgtcactatgcact
OVR01_0075_E03.b :
PBL01_0030_D12.b : TGGGCTCTATTNATGATATAAAGGTAATGCATTCTTGCAATGTGCtttttaaataaaata
LVRM1_0119_B08.b :
20110601C-014700 : ............................................................
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b : aacctcttgctccttttgctatactcgtccttctctatacttcacaatattatttactat
OVR01_0075_E03.b :
PBL01_0030_D12.b : acaaaaaaaaaaaaaaagggcacatgtgctcaacctgcaggtcccgcccctctaaatatt
LVRM1_0119_B08.b :
20110601C-014700 : ............................................................
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b : tatcactacgcatattaatgcatagtgagtgaattatatataataatctacatgcccatt
OVR01_0075_E03.b :
PBL01_0030_D12.b : ccttcaggggccagactaaccttacccgctttttgtaaaaggtggtcctatagggaacct
LVRM1_0119_B08.b :
20110601C-014700 : ............................................................
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b : gaccttatctattctaattatgcagaatctcttaagtacaatcatttnactatanncntt
OVR01_0075_E03.b :
PBL01_0030_D12.b : attttaagcaggcatggcgtcctttttaaactcctacgggaaaagtttacttgggatttt
LVRM1_0119_B08.b :
20110601C-014700 : ............................................................
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b : accgactcatcattctatcatcgtcgttacaataagg
OVR01_0075_E03.b :
PBL01_0030_D12.b : ttaagaacttatttctgggggggaaatttgaacacctcccgatttaacctcgggaaaaaa
LVRM1_0119_B08.b :
20110601C-014700 : ............................................................
---------+---------+---------+---------+---------+---------+ 1244
HTMT1_0008_H03.b :
OVR01_0075_E03.b :
PBL01_0030_D12.b : ttttaggtaagggttacccccctgcttccgtat
LVRM1_0119_B08.b :