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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-014818

Length: 1,529

Sequence [FASTA format sequence]
ACAGTGAATC AGCCTCACCT TCAGCCTTGT CCAGCAGCCC CAACAATCTG AGCCCAACGG
GCTGGTCACA ACCGAAAACC CCTGTGCCAG CACAGAGAGA GCGGGCGCCA GGATCCGGGA
CCCAGGAGAA AAACAAAATT AGGCCTCGTG GACAGAGAGA TTCAAGCTAT TACTGGGAAA
TAGAAGCCAG TGAAGTGATG CTTTCCACTC GGATTGGGTC AGGCTCCTTT GGAACTGTTT
ATAAGGGCAA GTGGCATGGA GATGTTGCAG TAAAGATCCT AAAGGTTGTT GACCCCACAC
CAGAGCAGTT GCAGGCCTTT AGGAATGAAG TGGCTGTCCT TCGCAAAACT CGGCATGTGA
ACATCCTGCT GTTCATGGGG TACATGACCA AGGACAACCT GGCGATTGTG ACCCAGTGGT
GTGAGGGCAG CAGCCTCTAC AAACACCTGC ATGTCCAGGA GACCAAGTTC CAGATGTTCC
AGTTGATTGA CATTGCCCGG CAGACGGCTC AGGGAATGGA CTACTTGCAT GCAAAGAACA
TCATCCACAG AGACATGAAA TCCAACAATA TATTTCTCCA TGAAGGCCTA ACGGTGAAAA
TTGGAGATTT TGGTTTGGCA ACAGTCAAGT CGCGCTGGAG TGGTTCTCAG CAGGTTGAAC
AACCTACTGG CTCCATCCTG TGGATGGCCC CAGAGGTGAT CCGGATGCAG GATAACAACC
CATTCAGCTT CCAGTCCGAC GTCTACTCCT ACGGCATTGT GCTGTACGAG CTCATGACGG
GGGAGCTCCC TTACTCCCAC ATCAACAACC GTGATCAGAT CATCTTCATG GTGGGCCGAG
GCTATGCCTC CCCAGATCTT AGTAAGCTCT ACAAGAACTG CCCAAAAGCA ATGAAGAGGC
TTGTGGCCGA CTGTGTGAAG AAAGTTAAGG AAGAAAGGCC TCTTTTTCCT CAGATCCTGT
CTTCCATCGA GCTGCTCCAA CACTCTCTAC CGAAAATCAA CCGGAGTGCT TCTGAGCCAT
CCCTGCACCG GGCGGCCCAC ACGGAGGACA TCAATGCCTG CACTCTGACC ACATCCCCGA
GATTGCCCGT CTTCTAGCTG ACTCTGCACC TGCGCTCAAG CCGCTGTGGG AGAAGTGAAG
TCAGCAGGTA CCACCTTTCT GCTCCCTTTC TGTGGGGACA GAGCTTATCT TCAGAGAAGC
TGCTGCTAAG GACCTTCTAG ACCACTCACA GGGCCTTAAC TTCACGATGC CTTTTCTATC
CAATTCTGGC CCTGGGAGAA GGAAGCCATT CGCGATGCTG GTTTGTCCTG CTCCCCCTCG
AGGTCCCATG CTCCTGTGCT GAGCCTTCTC CAGATGCACC AGTGGCTGCT GATGGCATTA
TGGGATCTGG GGCCCCAGCT ATTGATTGGC TAAATGAGTA ATTTGAGAGC AAGAAAAAAA
AGCACTCAGA GGGGAAAAAA GTGACTGGCA GGCAAACCAG CCATGACATG GGGGACATGT
TGATTTCGGG AATCAGCTCC TATGAGCAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRAF1RAF proto-oncogene serine/threonine-protein kinase [Homo sapiens]. 7010.0
Contig/Assembly ProteinBRAFserine/threonine-protein kinase B-raf [Homo sapiens]. 512e-145
Contig/Assembly ProteinARAFserine/threonine-protein kinase A-Raf [Homo sapiens]. 503e-142
Contig/Assembly ProteinKSR2kinase suppressor of Ras 2 [Homo sapiens]. 1742e-43
Contig/Assembly ProteinKSR1kinase suppressor of Ras 1 [Homo sapiens]. 1642e-40
Contig/Assembly ProteinFYNtyrosine-protein kinase Fyn isoform a [Homo sapiens]. 1526e-37
Contig/Assembly ProteinSRCproto-oncogene tyrosine-protein kinase Src [Homo sapiens]. 1503e-36
Contig/Assembly ProteinSRCproto-oncogene tyrosine-protein kinase Src [Homo sapiens]. 1503e-36
Contig/Assembly ProteinFRKtyrosine-protein kinase FRK [Homo sapiens]. 1504e-36
Contig/Assembly ProteinYES1tyrosine-protein kinase Yes [Homo sapiens]. 1495e-36


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRaf1RAF proto-oncogene serine/threonine-protein kinase [Mus musculus]. 7000.0
Contig/Assembly ProteinArafserine/threonine-protein kinase A-Raf isoform 1 [Mus musculus]. 508e-144
Contig/Assembly ProteinBrafserine/threonine-protein kinase B-raf [Mus musculus]. 506e-143
Contig/Assembly ProteinKsr2kinase suppressor of Ras 2 isoform 1 [Mus musculus]. 1742e-43
Contig/Assembly ProteinKsr1kinase suppressor of Ras 1 [Mus musculus]. 1681e-41
Contig/Assembly ProteinFyntyrosine-protein kinase Fyn isoform a [Mus musculus]. 1512e-36
Contig/Assembly ProteinSrcneuronal proto-oncogene tyrosine-protein kinase Src isoform 2 [Mus musculus]. 1496e-36
Contig/Assembly ProteinYes1tyrosine-protein kinase Yes [Mus musculus]. 1496e-36
Contig/Assembly ProteinYes1tyrosine-protein kinase Yes [Mus musculus]. 1496e-36
Contig/Assembly ProteinYes1tyrosine-protein kinase Yes [Mus musculus]. 1496e-36


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 3 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 4 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 11 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 10 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 9 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 8 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 7 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 6 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 5 [Canis familiaris]. 7050.0
Contig/Assembly ProteinLOC484648PREDICTED: similar to RAF proto-oncogene serine/threonine-protein kinase (Raf-1) (C-RAF) (cRaf) isoform 2 [Canis familiaris]. 7050.0


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRAF1RAF proto-oncogene serine/threonine-protein kinase [Bos taurus]. 7010.0
Contig/Assembly ProteinBRAFPREDICTED: v-raf murine sarcoma viral oncogene homolog B1 [Bos taurus]. 512e-145
Contig/Assembly ProteinBRAFPREDICTED: v-raf murine sarcoma viral oncogene homolog B1 isoform 2, partial [Bos taurus]. 512e-145
Contig/Assembly ProteinARAFserine/threonine-protein kinase A-Raf [Bos taurus]. 504e-143
Contig/Assembly ProteinKSR2kinase suppressor of Ras 2 [Bos taurus]. 1742e-43
Contig/Assembly ProteinKSR1PREDICTED: kinase suppressor of ras-like [Bos taurus]. 1696e-42
Contig/Assembly ProteinKSR1PREDICTED: kinase suppressor of ras-like [Bos taurus]. 1696e-42
Contig/Assembly ProteinFYNtyrosine-protein kinase Fyn [Bos taurus]. 1512e-36
Contig/Assembly ProteinFRKPREDICTED: tyrosine-protein kinase FRK-like [Bos taurus]. 1504e-36
Contig/Assembly ProteinSRCv-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Bos taurus]. 1504e-36


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinBRAFPREDICTED: serine/threonine-protein kinase B-raf, partial [Sus scrofa]. 512e-145
Contig/Assembly ProteinARAFserine/threonine-protein kinase A-Raf [Sus scrofa]. 504e-143
Contig/Assembly ProteinLOC100625718PREDICTED: serine/threonine-protein kinase A-Raf-like [Sus scrofa]. 465e-131
Contig/Assembly ProteinKSR2PREDICTED: kinase suppressor of Ras 2 [Sus scrofa]. 1733e-43
Contig/Assembly ProteinFYNtyrosine-protein kinase Fyn [Sus scrofa]. 1511e-36
Contig/Assembly ProteinSRCPREDICTED: proto-oncogene tyrosine-protein kinase Src [Sus scrofa]. 1502e-36
Contig/Assembly ProteinFRKPREDICTED: tyrosine-protein kinase FRK [Sus scrofa]. 1493e-36
Contig/Assembly ProteinEPHA3ephrin type-A receptor 3 [Sus scrofa]. 1441e-34
Contig/Assembly ProteinLCKtyrosine-protein kinase Lck [Sus scrofa]. 1396e-33
Contig/Assembly ProteinEPHA8PREDICTED: ephrin type-A receptor 8 [Sus scrofa]. 1393e-33


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010017D11AMP01_0017_D11.bBW956252 AK230616
DCI010068F11DCI01_0068_F11.bDB795652 
DCI010103D07DCI01_0103_D07.bDB798713 
OVRM10122H08OVRM1_0122_H08.bBP154541 AK235888
THY010201A11THY01_0201_A11.bBP160468 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
616A200.500WNTAG/*
T110.500TTG/L


Alignment:      TOP

20110601C-014818 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0017_D11.b : nntttactaatctaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0122_H08.b :
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0017_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRM1_0122_H08.b :
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : .......................................ACAGTGAATCAGCCTCACCTT
---------+---------+---------+---------+---------+---------+ 21
AMP01_0017_D11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACAGTGAATCAGCCTCACCTT
OVRM1_0122_H08.b :
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : CAGCCTTGTCCAGCAGCCCCAACAATCTGAGCCCAACGGGCTGGTCACAACCGAAAACCC
---------+---------+---------+---------+---------+---------+ 81
AMP01_0017_D11.b : CAGCCTTGTCCAGCAGCCCCAACAATCTGAGCCCAACGGGCTGGTCACAACCGAAAACCC
OVRM1_0122_H08.b :
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : CTGTGCCAGCACAGAGAGAGCGGGCGCCAGGATCCGGGACCCAGGAGAAAAACAAAATTA
---------+---------+---------+---------+---------+---------+ 141
AMP01_0017_D11.b : CTGTGCCAGCACAGAGAGAGCGGGCGCCAGGATCCGGGACCCAGGAGAAAAACAAAATTA
OVRM1_0122_H08.b : nagttgtcxxxxx
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : GGCCTCGTGGACAGAGAGATTCAAGCTATTACTGGGAAATAGAAGCCAGTGAAGTGATGC
---------+---------+---------+---------+---------+---------+ 201
AMP01_0017_D11.b : GGCCTCGTGGACAGAGAGATTCAAGCTATTACTGGGAAATAGAAGCCAGTGAAGTGATGC
OVRM1_0122_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGAAGTGATGC
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : TTTCCACTCGGATTGGGTCAGGCTCCTTTGGAACTGTTTATAAGGGCAAGTGGCATGGAG
---------+---------+---------+---------+---------+---------+ 261
AMP01_0017_D11.b : TTTCCACTCGGATTGGGTCAGGCTCCTTTGGAACTGTTTATAAGGGCAAGTGGCATGGAG
OVRM1_0122_H08.b : TTTCCACTCGGATTGGGTCAGGCTCCTTTGGAACTGTTTATAAGGGCAAGTGGCATGGAG
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b :
20110601C-014818 : ATGTTGCAGTAAAGATCCTAAAGGTTGTTGACCCCACACCAGAGCAGTTGCAGGCCTTTA
---------+---------+---------+---------+---------+---------+ 321
AMP01_0017_D11.b : ATGTTGCAGTAAAGATCCTAAAGGTTGTTGACCCCACACCAGAGCAGTTGCAGGCCTTTA
OVRM1_0122_H08.b : ATGTTGCAGTAAAGATCCTAAAGGTTGTTGACCCCACACCAGAGCAGTTGCAGGCCTTTA
DCI01_0103_D07.b : aaaaaccgaatcctatagggctxxxxxxxxxxxxxxxxx
DCI01_0068_F11.b : nnnnnaacgaaaccatxxxxxxxxxxxxxxxxxxxxxxx
THY01_0201_A11.b :
20110601C-014818 : GGAATGAAGTGGCTGTCCTTCGCAAAACTCGGCATGTGAACATCCTGCTGTTCATGGGGT
---------+---------+---------+---------+---------+---------+ 381
AMP01_0017_D11.b : GGAATGAAGTGGCTGTCCTTCGCAAAACTCGGCATGTGAACATCCTGCTGTTCATGGGGT
OVRM1_0122_H08.b : GGAATGAAGTGGCTGTCCTTCGCAAAACTCGGCATGTGAACATCCTGCTGTTCATGGGGT
DCI01_0103_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0068_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0201_A11.b :
20110601C-014818 : ACATGACCAAGGACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGCAGCAGCCTCTACA
---------+---------+---------+---------+---------+---------+ 441
AMP01_0017_D11.b : ACATGACCAAGGACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGCAGCAGCCTCTACA
OVRM1_0122_H08.b : ACATGACCAAGGACAACCTGGCGATTGTGACCCAGTGGTGTGAGGGCAGCAGCCTCTACA
DCI01_0103_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0068_F11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0201_A11.b :
20110601C-014818 : AACACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATTGCCCGGC
---------+---------+---------+---------+---------+---------+ 501
AMP01_0017_D11.b : AATACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATTGCCCGGC
OVRM1_0122_H08.b : AACACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATTGCCCGGC
DCI01_0103_D07.b : xxcACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATTGCCCGGC
DCI01_0068_F11.b : xxcACCTGCATGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATTGCCCGGC
THY01_0201_A11.b :
20110601C-014818 : AGACGGCTCAGGGAATGGACTACTTGCATGCAAAGAACATCATCCACAGAGACATGAAAT
---------+---------+---------+---------+---------+---------+ 561
AMP01_0017_D11.b : AGACGGCTCAGGGAATGGACTACTTGCATGCAAAGAACATCATCCACAGAGACATGAAAT
OVRM1_0122_H08.b : AGACGGCTCAGGGAATGGACTACTTGCATGCAAAGAACATCATCCACAGAGACATGAAAT
DCI01_0103_D07.b : AGACGGCTCAGGGAATGGACTACTTGCATGCAAAGAACATCATCCACAGAGACATGAAAT
DCI01_0068_F11.b : AGACGGCTCAGGGAATGGACTACTTGCATGCAAAGAACATCATCCACAGAGACATGAAAT
THY01_0201_A11.b : ccaggcaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-014818 : CCAACAATATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGAGATTTTGGTTTGGCAA
---------+---------+---------+---------+---------+---------+ 621
AMP01_0017_D11.b : CCAACAATATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGAGATTTTGGTTTGGCAA
OVRM1_0122_H08.b : CCAACAATATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGAGATTTTGGTTTGGCAA
DCI01_0103_D07.b : CCAACAATATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGAGATTTTGGTTAGGCAA
DCI01_0068_F11.b : CCAACAATATATTTCTCCATGAAGGCCTAACGGTGAAAATTGGAGATTTTGGTTAGGCAA
THY01_0201_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCGGTGAAAATTGGAGATTTTGGTTTGGCAA
20110601C-014818 : CAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
---------+---------+---------+---------+---------+---------+ 681
AMP01_0017_D11.b : CAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
OVRM1_0122_H08.b : CAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
DCI01_0103_D07.b : CAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
DCI01_0068_F11.b : CAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
THY01_0201_A11.b : CAGTCAAGTCGCGCTGGAGTGATTCTCAGCAGGTTGAACAACCTACTGGCTCCATCCTGT
20110601C-014818 : GGATGGCCCCAGAGGTGATCCGGATGCAGGATAACAACCCATTCAGCTTCCAGTCCGACG
---------+---------+---------+---------+---------+---------+ 741
AMP01_0017_D11.b : GGATGGCCCCAGAGGTGATCCGGATGCANGATAACAACCCATTCAGCTTCCAGTCCGACG
OVRM1_0122_H08.b : GGATGGCCCCAGAGGTGATCCGGATGCAGGATAACAACCCATTCAGCTTCCAGTCCGACG
DCI01_0103_D07.b : GGATGGCCCCAGAGGTGATCCGGATGCAGGATAACAACCCATTCAGCTTCCAGTCCGACG
DCI01_0068_F11.b : GGATGGCCCCAGAGGTGATCCGGATGCAGGATAACAACCCATTCAGCTTCCAGTCCGACG
THY01_0201_A11.b : GGATGGCCCCAGAGGTGATCCGGATGCAGGATAACAACCCATTCAGCTTCCAGTCCGACG
20110601C-014818 : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
---------+---------+---------+---------+---------+---------+ 801
AMP01_0017_D11.b : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
OVRM1_0122_H08.b : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
DCI01_0103_D07.b : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
DCI01_0068_F11.b : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
THY01_0201_A11.b : TCTACTCCTACGGCATTGTGCTGTACGAGCTCATGACGGGGGAGCTCCCTTACTCCCACA
20110601C-014818 : TCAACAACCGTGATCAGATCATCTTCATGGTGGGCCGAGGCTATGCCTCCCCAGATCTTA
---------+---------+---------+---------+---------+---------+ 861
AMP01_0017_D11.b : TCAACAACCGTGATCAGATCATCTTCAGGGTGGGCCCAAGCTATGCCTCCCCAGATCTTA
OVRM1_0122_H08.b : TCAACAACCGTGATCAGATCATCTTCATGGTGGGCCGAGGCTATGCCTCCCCAGATCTTA
DCI01_0103_D07.b : TCAACAACCGTGATCAGATCATCTTCATGGTGGGCCGAGGCTATGCCTCCCCAGATCTTA
DCI01_0068_F11.b : TCAACAACCGTGATCAGATCATCTTCATGGTGGGCCGAGGCTATGCCTCCCCAGATCTTA
THY01_0201_A11.b : TCAACAACCGTGATCAGATCATCTTCATGGTGGGCCGAGGCTATGCCTCCCCAGATCTTA
20110601C-014818 : GTAAGCTCTACAAGAACTGCCCAAAAGCAATGAAGAGGCTTGTGGCCGACTGTGTGAAGA
---------+---------+---------+---------+---------+---------+ 921
AMP01_0017_D11.b : ATAAGCTCTACAA*AACTGCCCAAAAACAATGAAAAAGCTTGTGGCCAACTGTGTGAAAA
OVRM1_0122_H08.b : GNTAGCTCTACAAGAACTGCCCAAAAGCAATGAAGAGGCTTGTGGCCGACTGTGTGAAGA
DCI01_0103_D07.b : GTAAGCTCTACAAGAACTGCCCAAAAGCAATGAAGAGGCTTGTGGCCGACTGTGTGAAGA
DCI01_0068_F11.b : GTAAGCTCTACAAGAACTGCCCAAAAGCAATGAAGAGGCTTGTGGCCGACTGTGTGAAGA
THY01_0201_A11.b : GTAAGCTCTACAAGAACTGCCCAAAAGCAATGAAGAGGCTTGTGGCCGACTGTGTGAAGA
20110601C-014818 : AAGTTAAGGAAGAAAGGCCTCTTTTTCCTCAGATCCTGTCTTCCATCGAGCTGCTCCAAC
---------+---------+---------+---------+---------+---------+ 981
AMP01_0017_D11.b : AAGTTAGGGAAaaaggcctccttttcctcaaatctgtcttccatcaactgcttcaaaatt
OVRM1_0122_H08.b : AAGTTAAGGAAGAAA*GCCTCTTTTTCctcagat
DCI01_0103_D07.b : AAGTTAAGAA**GAAAGCCTCTTTTTC*TCAGATCCTGTCTTC*ATCGAGCTGCTC*AAC
DCI01_0068_F11.b : AAGTTAAGGAAGAAAGGCCTCTTTTTCCTCAGATCCTGTCTTCCATCGAGCTGCTCCAAC
THY01_0201_A11.b : AAGTTAAGGAAGAAAGGCCTCTTTTTCCTCAGATCCTGTCTTCCATCGAGCTGCTCCAAC
20110601C-014818 : ACTCTCTACCGAAAATCAACCGGAGTGCTTCTGAGCCATCCCTGCACCGGGCGGCCCACA
---------+---------+---------+---------+---------+---------+ 1041
AMP01_0017_D11.b : tttacccaaaatcaaccgaatggttctgaacaatcctggcccgggcggccacaggaagaa
OVRM1_0122_H08.b :
DCI01_0103_D07.b : ACTCTCTACCGAAAATCA*CCGGAGTGCTTCTGAGCCATCCCTGCACCGGGCGGCCCACA
DCI01_0068_F11.b : ACTCTCTACCGAAAATCAACCGGAGTGCTTCTGAGCCATCCCTGCACCGGGCGGCCCACA
THY01_0201_A11.b : ACTCTCTACCGAAAATCAACCGGAGTGCTTCTGAGCCATCCCTGCACCGGGCGGCCCACA
20110601C-014818 : CGGAGGACATCAATGCCTGCACTCTGACCACATCCCCGAGATTGCCCGTCTTCTAGCTGA
---------+---------+---------+---------+---------+---------+ 1101
AMP01_0017_D11.b : ataagggctgcatcttaaaaattccc
OVRM1_0122_H08.b :
DCI01_0103_D07.b : CG*AGGACATCAATGCCTGCACTCTGACCACATCCCCGAGATTGCCCGTCNTCTAGCTGA
DCI01_0068_F11.b : CGGAGGACATCAATGCCTGCACTCTGACCACATCCCCGAGATTGCCCGTCTTCTAGCTGA
THY01_0201_A11.b : CGGAGGACATCAATGCCTGCACTCTGACCACATCCCCGAGATTGCCCGTCTTCTAGCTGA
20110601C-014818 : CTCTGCACCTGCGCTCAAGCCGCTGTGGGAGAAGTGAAGTCAGCAGGTACCACCTTTCTG
---------+---------+---------+---------+---------+---------+ 1161
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : CTCTGCACCTGCGCTCAAGCCGCTGTGGGAGAAAGTGAGTCCGCAGGTACCACCTTTCTG
DCI01_0068_F11.b : CTCTGCACCTGCGCTCAAGCCGCTGTGGGAGAAGTGAAGTCCGCAGGTACCACCTTTCTG
THY01_0201_A11.b : CTCTGCACCTGCGCTCAAGCCGCTGTGGGAGAAGTGAAGTCAGCAGGTACCACCTTTCTG
20110601C-014818 : CTCCCTTTCTGTGGGGACAGAGCTTATCTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGA
---------+---------+---------+---------+---------+---------+ 1221
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : CTCCCTT*CTGGTGGGACAGAGCTTATCTTC*GAGAAGCTGCTGCNTAGGACCTTCTAGA
DCI01_0068_F11.b : CTCCCTTTCTGTGGGGACAGAGCTTATCTTCAGAGAAGCTGCTGCNTANGACCTTCTAGA
THY01_0201_A11.b : CTCCCTTTCTGTGGGGACAGAGCTTATCTTCAGAGAAGCTGCTGCTAAGGACCTTCTAGA
20110601C-014818 : CCACTCACAGGGCCTTAACTTCACGATGCCTTTTCTATCCAATTCTGGCCCTGGGAGAAG
---------+---------+---------+---------+---------+---------+ 1281
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : CCACTCcagggccttacttcacgatgccttttcaatcaattctggccctgggaaaagaag
DCI01_0068_F11.b : CCACTCACAGGGCCTTAACTTCACGATGCCTTTTCTATCCAATTCTGGCCCCTGGGAGAG
THY01_0201_A11.b : CCACTCACAGGGCCTTAACTTCACGATGCCTTTTCTATCCAATTCTGGCCCTGGGAGAAG
20110601C-014818 : GAAGCCATTCGCGATGCTGGTTTGTCCTGCTCCCCCTCGAGGTCCCATGCTCCTGTGCTG
---------+---------+---------+---------+---------+---------+ 1341
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : ccattccaatgctggttgtcctgctcccctcgaggtccatgctctgtgctgagcctctcc
DCI01_0068_F11.b : GGAAGCATTTCGCATGCTGGTTTGTCCTGCTCCCCCTCGAGGTCCCCATGCTCTGTGCTG
THY01_0201_A11.b : GAAGCCATTCGCGATGCTGGTTTGTCCTGCTCCCCCTCGAGGTCCCATGCTCCTGTGCTG
20110601C-014818 : AGCCTTCTCCAGATGCACCAGTGGCTGCTGATGGCATTATGGGATCTGGGGCCCCAGCTA
---------+---------+---------+---------+---------+---------+ 1401
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : agagcacagtggctgctgatgcatatgggatctgggccccactatgatggctaatgagta
DCI01_0068_F11.b : AGCCTTCTCCAGATGCAC*AGTGGCTGCTGATGCCATTATGGGATCTGGGGCCCCAGCTA
THY01_0201_A11.b : AGCCTTCTCCAGATGCACCAGTGGCTGCTGATGGCATTATGGGATCTGGGGCCCCAGCTA
20110601C-014818 : TTGATTGGCTAAATGAGTAATTTGAGAGCAAGAAAAAAAAGCACTCAGAGGGGAAAAAAG
---------+---------+---------+---------+---------+---------+ 1461
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : tttggagcaaaaaaaaccctccagggaaaaaatgatgcagcaaaccacccgactggggaa
DCI01_0068_F11.b : Tgaatggctaaatgagtatttggaagccagaaaaaaaacctctgaagggaaaaaatggac
THY01_0201_A11.b : TTGATTGGCTAAATGAGTAATTTGAGAGCAAGAAAAAAAAGCACTCAGAGGGGAAAAAAG
20110601C-014818 : TGACTGGCAGGCAAACCAGCCATGACATGGGGGACATGTTGATTTCGGGAATCAGCTCCT
---------+---------+---------+---------+---------+---------+ 1521
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : tgtgattccgaaccctccttacaacattttaaaaaaatctctccaagaaaaaggggtgcc
DCI01_0068_F11.b : tgcnggcaaacacccctgaatgggggaaattttaattcggaaatccccccttgaccaccc
THY01_0201_A11.b : TGACTGGCAGGCAAACCAGCCATGACATGGGGGACATGTTGATTTCGGGAATCAGCTCCT
20110601C-014818 : ATGAGCAA....................................................
---------+---------+---------+---------+---------+---------+ 1529
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : caaaggagtttcaaatgcccaaacccaaatttaaaagtgcccggaaaccttttaataaat
DCI01_0068_F11.b : ttttttcaaaaacttccttccaaaaaaaaaaagggggggcccccaaagggtttttccaca
THY01_0201_A11.b : ATGAGCAAcacttattacagaaagacttctcttcagagatgaaatgagtggtgtggcgcc
20110601C-014818 : ............................................................
---------+---------+---------+---------+---------+---------+ 1529
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b : atttgactaccttctgagcccgcttgagatttcaaggggggcgccccccccccccgg
DCI01_0068_F11.b : agcca
THY01_0201_A11.b : caacaggtagttttgcccataatgcaccaaacaacccaggacttgtcaaaactgtggccc
20110601C-014818 : ............................................................
---------+---------+---------+---------+---------+---------+ 1529
AMP01_0017_D11.b :
OVRM1_0122_H08.b :
DCI01_0103_D07.b :
DCI01_0068_F11.b :
THY01_0201_A11.b : gcccggaaggaacccggcttttggttctatggaacttgac