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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-015201

Length: 1,453

Sequence [FASTA format sequence]
GTGAATGAGG GACAGAGGGA GTGTCTTCTT TGCTACCGGA GCCTGCCCCG GAATTAGCCT
TCTGCGCTGT TCAGAAGACC CAGCTGTTCT GAGCTCTGAG TGCTGCAGCC CCTTGGAGAG
ACAACCATGT CCTGGCGGCT CTCTGCAGTG CTGGTGTCCT TCGTGTCCCT GGCTGTGTTT
TTGCATTACG GCCATCATAT GAAAGCAAAA GTTTTTCCAG AAATCACAGA CTCTTCTTCA
CCTACAACAG CAGCAACAGT ACAGGCCACA GCAGAACCTT CTCTCTGGAA GCCAACTAAC
CACACGCCTC ACAAAACTTT AGCAGCAAAG TCAACAGATG GTCATGTCAC CTCTCAGATA
GCTACCACAG TGACCGACTC CGAGACCCTC ACCACACACA CAACCATAAC AACTCTCGCA
GCAACTTCCC TGGCAGCTAC AAACAGCACC CCATCTACCA GCCCAACAAC CCACACCCTG
TTCACAACCC TGGCCACACC CAACACATCA CACATGGCTG CTCCAGTCAC TGAGGCTGCA
ATCAGCCCCA GTGCAGGTCT CAGTTCACTG CTACCCACCA TCATCCCACC AACCCACACA
ACTGGAACCA GGTCATCAAC CCTCAGCCCC ACAGCTGGGA AAACTACTCA ACCCAGTAAC
CAGACCACCC TTCCAGCAAC TTTGTCCACC TCACCACACA ACAGCACCGC CAGTCAGAAG
CCTACTCACC CCAACCATAC CCCAGGGCCA ACCACAGGCG CACACAATAC CACACAAACG
GCCTCCCCTG CCACCATAGC TCCCGGGCCC ACCCTTGCAC CTCAGCCATC ATCAGCCAAG
ACTGGAATTT ATCAAGTTCT AAATGGAAGC AAGCTCTGTA TCAAAGCAGA GATGGGAATA
GAGTTGACAG TTCAAGATAC ACAGTCGGTT TTTTCACCTC AGAGATACTT CAACATTGAC
CCCAACACAA CCCAAGCCTC CGGGAACTGT GGCTCCCGAA AATCCAAGCT TCTCCTGAAT
TTCCAGGGCG GATTTGTGAA TCTCACATTT ACCAAGGATG AAAACTCGTA TTATGTCAGT
GGAGTGGGAG CCTATCTGAC CGTCTCAAAT CCAGAGAAAG TTTACCAAGG AATGAAAAAT
GCTGTGGTGA TGTTTGAGAC CATGATCGGG CACTCCTTCA AGTGCATAAG TGAACAGAGT
ATCCAGCTGT CACCCCACCT TCAGCTGAAC ACAATGAACG TCCAGCTTCA GGCCTTTGAT
TTCGAAGATG ACCACTTTGG AAATGTGGAC GAGTGTTCAT CTGACTACAC AATTGTGCTT
CCTGTGATTG GGGCCATTGT GCTTGGTCTC TGTGCTGTGG GTTTGATTGT CTATGGAATC
CGCCTAAAGC GTGAATCATC TGAATACCAG AGAATCTAAC TGGTGCCCCA CGGGAAAAAA
AAAAAAACCT GGA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLAMP3lysosome-associated membrane glycoprotein 3 [Homo sapiens]. 455e-128O
Contig/Assembly ProteinLAMP2lysosome-associated membrane glycoprotein 2 isoform B precursor [Homo sapiens]. 1033e-22O
Contig/Assembly ProteinLAMP2lysosome-associated membrane glycoprotein 2 isoform C precursor [Homo sapiens]. 1012e-21O
Contig/Assembly ProteinLAMP2lysosome-associated membrane glycoprotein 2 isoform A precursor [Homo sapiens]. 1003e-21O
Contig/Assembly ProteinLAMP1lysosome-associated membrane glycoprotein 1 precursor [Homo sapiens]. 96.75e-20O
Contig/Assembly ProteinCD68macrosialin isoform B [Homo sapiens]. 94.72e-19O
Contig/Assembly ProteinCD68macrosialin isoform A [Homo sapiens]. 94.72e-19O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLamp3lysosome-associated membrane glycoprotein 3 precursor [Mus musculus]. 3093e-84O
Contig/Assembly ProteinLamp2lysosome-associated membrane glycoprotein 2 isoform 2 [Mus musculus]. 1065e-23O
Contig/Assembly ProteinLamp2lysosome-associated membrane glycoprotein 2 isoform 1 [Mus musculus]. 1051e-22O
Contig/Assembly ProteinLamp1lysosome-associated membrane glycoprotein 1 [Mus musculus]. 1003e-21O
Contig/Assembly ProteinCd68macrosialin [Mus musculus]. 84.32e-16O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC607186PREDICTED: similar to lysosomal-associated membrane protein 3 [Canis familiaris]. 488e-138
Contig/Assembly ProteinLOC481037PREDICTED: similar to lysosomal-associated membrane protein 2 precursor isoform 1 [Canis familiaris]. 1005e-21O
Contig/Assembly ProteinLOC481037PREDICTED: similar to lysosomal-associated membrane protein 2 precursor isoform 3 [Canis familiaris]. 1005e-21O
Contig/Assembly ProteinLOC481037PREDICTED: similar to Lysosome-associated membrane glycoprotein 2 precursor (LAMP-2) (CD107b antigen) isoform 4 [Canis familiaris]. 99.48e-21O
Contig/Assembly ProteinLOC481037PREDICTED: similar to lysosomal-associated membrane protein 2 precursor isoform 2 [Canis familiaris]. 97.82e-20O
Contig/Assembly ProteinLOC476995PREDICTED: similar to Lysosome-associated membrane glycoprotein 1 precursor (LAMP-1) (CD107a antigen) isoform 1 [Canis familiaris]. 95.51e-19O
Contig/Assembly ProteinLOC476995PREDICTED: similar to Lysosome-associated membrane glycoprotein 1 precursor (LAMP-1) (CD107a antigen) isoform 2 [Canis familiaris]. 95.51e-19O
Contig/Assembly ProteinLOC489476PREDICTED: similar to CD68 antigen isoform 2 [Canis familiaris]. 86.37e-17O
Contig/Assembly ProteinLOC489476PREDICTED: similar to CD68 antigen isoform 1 [Canis familiaris]. 80.93e-15O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLAMP3lysosome-associated membrane glycoprotein 3 [Bos taurus]. 439e-123O
Contig/Assembly ProteinLAMP2lysosomal-associated membrane protein 2 isoform 2 [Bos taurus]. 1012e-21O
Contig/Assembly ProteinLAMP2lysosomal-associated membrane protein 2 isoform 1 [Bos taurus]. 1003e-21O
Contig/Assembly ProteinLAMP1lysosome-associated membrane glycoprotein 1 precursor [Bos taurus]. 97.82e-20O
Contig/Assembly ProteinCD68macrosialin [Bos taurus]. 94.42e-19O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100624581PREDICTED: lysosome-associated membrane glycoprotein 3-like [Sus scrofa]. 6460.0O
Contig/Assembly ProteinLAMP2PREDICTED: lysosome-associated membrane glycoprotein 2 [Sus scrofa]. 1033e-22O
Contig/Assembly ProteinLAMP2PREDICTED: lysosome-associated membrane glycoprotein 2 isoform 1 [Sus scrofa]. 1033e-22O
Contig/Assembly ProteinLAMP-1lysosome-associated membrane glycoprotein 1 [Sus scrofa]. 94.41e-19O
Contig/Assembly ProteinLOC100625447PREDICTED: macrosialin-like [Sus scrofa]. 82.46e-16O
Contig/Assembly ProteinLOC100522571PREDICTED: macrosialin-like [Sus scrofa]. 80.13e-15O
Contig/Assembly ProteinLOC100520753PREDICTED: macrosialin-like isoform 1 [Sus scrofa]. 75.57e-14O
Contig/Assembly ProteinLOC100520753PREDICTED: macrosialin-like isoform 2 [Sus scrofa]. 75.19e-14O


Assembly Members: 4      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
DCI010015D03DCI01_0015_D03.bDB791620 
LNG010001H06LNG01_0001_H06.bBP440369 AK231612
OVRT10020H06OVRT1_0020_H06.bFS688071 
SPL010008H03SPL01_0008_H03.bBP159104 AK350185

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
592A200.500WNACC/T
G200.500GCC/A


Alignment:      TOP

20110601C-015201 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LNG01_0001_H06.b : ggcatctgcgtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0020_H06.b : nccg
DCI01_0015_D03.b : nnnaacgtacttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0008_H03.b :
20110601C-015201 : ............................GTGAATGAGGGACAGAGGGAGTGTCTTCTTTG
---------+---------+---------+---------+---------+---------+ 32
LNG01_0001_H06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGAATGAGGGACAGAGGGAGTGTCTTCTTTG
OVRT1_0020_H06.b : cttnnnnnnnnnccgttagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0015_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0008_H03.b :
20110601C-015201 : CTACCGGAGCCTGCCCCGGAATTAGCCTTCTGCGCTGTTCAGAAGACCCAGCTGTTCTGA
---------+---------+---------+---------+---------+---------+ 92
LNG01_0001_H06.b : CTACCGGAGCCTGCCCCGGAATTAGCCTTCTGCGCTGTTCAGAAGACCCAGCTGTTCTGA
OVRT1_0020_H06.b : xxxxxxxxxxxxxxxxxxxxxTTAGCCTTCTGCGCTGTTCAGAAGACCCAGCTGTTCTGA
DCI01_0015_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAAGACCCAGCTGTTCTGA
SPL01_0008_H03.b :
20110601C-015201 : GCTCTGAGTGCTGCAGCCCCTTGGAGAGACAACCATGTCCTGGCGGCTCTCTGCAGTGCT
---------+---------+---------+---------+---------+---------+ 152
LNG01_0001_H06.b : GCTCTGAGTGCTGCAGCCCCTTGGAGAGACAACCATGTCCTGGCGGCTCTCTGCAGTGCT
OVRT1_0020_H06.b : GCTCTGAGTGCTGCAGCCCCTTGGAGAGACAACCATGTCCTGGCGGCTCTCTGCAGTGCT
DCI01_0015_D03.b : GCTCTGAGTGCTGCAGCCCCTTGGAGAGACAACCATGTCCTGGCGGCTCTCTGCAGTGCT
SPL01_0008_H03.b :
20110601C-015201 : GGTGTCCTTCGTGTCCCTGGCTGTGTTTTTGCATTACGGCCATCATATGAAAGCAAAAGT
---------+---------+---------+---------+---------+---------+ 212
LNG01_0001_H06.b : GGTGTCCTTCGTGTCCCTGGCTGTGTTTTTGCATTACGGCCATCATATGAAAGCAAAAGT
OVRT1_0020_H06.b : GGTGTCCTTCGTGTCCCTGGCTGTGTTTTTGCATTACGGCCATCATATGAAAGCAAAAGT
DCI01_0015_D03.b : GGTGTCCTTCGTGTCCCTGGCTGTGTTTTTGCATTACGGCCATCATATGAAAGCAAAAGT
SPL01_0008_H03.b :
20110601C-015201 : TTTTCCAGAAATCACAGACTCTTCTTCACCTACAACAGCAGCAACAGTACAGGCCACAGC
---------+---------+---------+---------+---------+---------+ 272
LNG01_0001_H06.b : TTTTCCAGAAATCACAGACTCTTCTTCACCTACAACAGCAGCAACAGTACAGGCCACAGC
OVRT1_0020_H06.b : TTTTCCAGAAATCACAGACTCTTCTTCACCTACAACAGCAGCAACAGTACAGGCCACAGC
DCI01_0015_D03.b : TTTTCCAGAAATCACAGACTCTTCTTCACCTACAACAGCAGCAACAGTACAGGCCACAGC
SPL01_0008_H03.b :
20110601C-015201 : AGAACCTTCTCTCTGGAAGCCAACTAACCACACGCCTCACAAAACTTTAGCAGCAAAGTC
---------+---------+---------+---------+---------+---------+ 332
LNG01_0001_H06.b : AGAACCTTCTCTCTGGAAGCCAACTAACCACACGCCTCACAAAACTTTAGCAGCAAAGTC
OVRT1_0020_H06.b : AGAACCTTCTCTCTGGAAGCCAACTAACCACACGCCTCACAAAACTTTAGCAGCAAAGTC
DCI01_0015_D03.b : AGAACCTTCTCTCTGGAAGCCAACTAACCACACGCCTCACAAAACTTTAGCAGCAAAGTC
SPL01_0008_H03.b :
20110601C-015201 : AACAGATGGTCATGTCACCTCTCAGATAGCTACCACAGTGACCGACTCCGAGACCCTCAC
---------+---------+---------+---------+---------+---------+ 392
LNG01_0001_H06.b : AACAGATGGTCATGTCACCTCTCAGATAGCTACCACAGTGACCGACTCCGAGACCCTCAC
OVRT1_0020_H06.b : AACAGATGGTCATGTCACCTCTCAGATAGCTACCACAGTGACCGACTCCGAGACCCTCAC
DCI01_0015_D03.b : AACAGATGGTCATGTCACCTCTCAGATAGCTACCACAGTGACCGACTCCGAGACCCTCAC
SPL01_0008_H03.b :
20110601C-015201 : CACACACACAACCATAACAACTCTCGCAGCAACTTCCCTGGCAGCTACAAACAGCACCCC
---------+---------+---------+---------+---------+---------+ 452
LNG01_0001_H06.b : CACACACACAACCATAACAACTCTCGCAGCAACTTCCCTGGCAGCTACAAACAGCACCCC
OVRT1_0020_H06.b : CACACACACAACCATAACAACTCTCGCAGCAACTTCCCTGGCAGCTACAAACAGCACCCC
DCI01_0015_D03.b : CACACACACAACCATAACAACTCTCGCAGCAACTTCCCTGGCAGCTACAAACAGCACCCC
SPL01_0008_H03.b :
20110601C-015201 : ATCTACCAGCCCAACAACCCACACCCTGTTCACAACCCTGGCCACACCCAACACATCACA
---------+---------+---------+---------+---------+---------+ 512
LNG01_0001_H06.b : ATCTACCAGCCCAACAACCCACACCCTGTTCACAACCCTGGCCACACCCAACACATCACA
OVRT1_0020_H06.b : ATCTACCAGCCCAACAACCCACACCCTGTTCACAACCCTGGCCACACCCAACACATCACA
DCI01_0015_D03.b : ATCTACCAGCCCAACAACCCACACCCTGTTCACAACCCTGGCCACACCCAACACATCACA
SPL01_0008_H03.b : ctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-015201 : CATGGCTGCTCCAGTCACTGAGGCTGCAATCAGCCCCAGTGCAGGTCTCAGTTCACTGCT
---------+---------+---------+---------+---------+---------+ 572
LNG01_0001_H06.b : CATGGCTGCTCCAGTCACTGAGGCTGCAATCAGCCCCAGTGCAGGTCTCAGTTCACTGCT
OVRT1_0020_H06.b : CATGGCTGCTCCAGTCACTGAGGCTGCAATCAGCCCCAGTGCAGGTCTCAGTTCACTGCT
DCI01_0015_D03.b : CATGGCTGCTCCAGTCACTGAGGCTGCAATCAGCCCCAGTGCAGGTCTCAGTTCACTGCT
SPL01_0008_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGCCCCAGTGCAGGTCTCAGTTCACTGCT
20110601C-015201 : ACCCACCATCATCCCACCAACCCACACAACTGGAACCAGGTCATCAACCCTCAGCCCCAC
---------+---------+---------+---------+---------+---------+ 632
LNG01_0001_H06.b : ACCCACCATCATCCCACCAACCCACACAACTGGAACCAGGTCATCAACCCTCAGCCCCAC
OVRT1_0020_H06.b : ACCCACCATCATCCCACCAGCCCACACAACTGGAACCAGGTCATCAACCCTCAGCCCCAC
DCI01_0015_D03.b : ACCCACCATCATCCCACCAGCCCACACAACTGGAACCAGGTCATCAACCCTCAGCCCCAC
SPL01_0008_H03.b : ACCCACCATCATCCCACCAACCCACACAACTGGAACCAGGTCATCAACCCTCAGCCCCAC
20110601C-015201 : AGCTGGGAAAACTACTCAACCCAGTAACCAGACCACCCTTCCAGCAACTTTGTCCACCTC
---------+---------+---------+---------+---------+---------+ 692
LNG01_0001_H06.b : AGCTGGGAAAACTACTCAACCCAGTAACCAGACCACCCTTCCAGCAACTTTGTCCACCTC
OVRT1_0020_H06.b : AGCTGGGAAAACTACTCAACCCAGTAACCAGACCACCCTTCCAGCAACTTTGTCCACCTC
DCI01_0015_D03.b : AGCTGGGAAAACTACTCAACCCAGTAACCAGACCACCCTTTCAGCAACTTTGTCCACCTT
SPL01_0008_H03.b : AGCTGGGAAAACTACTCAACCCAGTAACCAGACCACCCTTCCAGCAACTTTGTCCACCTC
20110601C-015201 : ACCACACAACAGCACCGCCAGTCAGAAGCCTACTCACCCCAACCATACCCCAGGGCCAAC
---------+---------+---------+---------+---------+---------+ 752
LNG01_0001_H06.b : ACCACACAACAGCACCGCCAGTCAGAAGCCTACTCACCCCAACCATACCCCAGGGCCAAC
OVRT1_0020_H06.b : ACCACACAACAGCACCGCCAGTCAGAAGCCTACTCACCCCAACCATACCCCAGGGCCAAC
DCI01_0015_D03.b : CACACACAACAGCACCGCCAGTCAGAAGCCTACTCACCCCAACCATACCCCAGGGGCAAC
SPL01_0008_H03.b : ACCACACAACAGCACCGCCAGTCAGAAGCCTACTCACCCCAACCATACCCCAGGGCCAAC
20110601C-015201 : CACAGGCGCACACAATACCACACAAACGGCCTCCCCTGCCACCATAGCTCCCGGG*CCCA
---------+---------+---------+---------+---------+---------+ 811
LNG01_0001_H06.b : CACAGGCGCACACAATACCACACAAACGGCCTCCCCTGCCACCATAGCTCCCGGG*CCCA
OVRT1_0020_H06.b : CACAGGCGCACACAATACCACACAAACGGCCTCCCCTGCCACCATAGCTCCCGGG*CCCA
DCI01_0015_D03.b : CACAGGCGCACACAATACCACACAAAGGGCCTCCCCTGGCACCATAGCTCCCGGGGCCCA
SPL01_0008_H03.b : CACAGGCGCACACAATACCACACAAACGGCCTCCCCTGCCACCATAGCTCCCGGG*CCCA
20110601C-015201 : CCCTTGCACCTCAGCCATCATCAGCCAAGACTGGAATTTATCAAGTTCTAAATGGAAGCA
---------+---------+---------+---------+---------+---------+ 871
LNG01_0001_H06.b : CCCTTGCACCTCAGCCATCATCAGCCAAGACTGGAATTTTATCAGTTCTAAATGGAAGCA
OVRT1_0020_H06.b : CCCTTGCACCTCAGCCATCATCAGCCAAGACTGGAATTTNATCAGTTCTAAATGGAAAGC
DCI01_0015_D03.b : CCTTTGCACCTCAGCCATCATC*GCCAAAACTGGAATTTATCAAGTTCTAAATGGAAGCA
SPL01_0008_H03.b : CCCTTGCACCTCAGCCATCATCAGCCAAGACTGGAATTTATCAAGTTCTAAATGGAAGCA
20110601C-015201 : AGCTCTGTATCAAAGCAGAGATGGGAATAGAGTTGACAGTTCAAGATACACAGTCGGTTT
---------+---------+---------+---------+---------+---------+ 931
LNG01_0001_H06.b : AGCTCTGTATCAAAGCAGAGATGGGAATAGAGTTGACAGTTCANGATACACAGTCGGTTT
OVRT1_0020_H06.b : AGCTCTGTATCAAAGCAGAGATGGGAATAGAGTTGACAGTTCAAGATACACAGTCGGTTT
DCI01_0015_D03.b : AGCTCTGTATCAAAGCCAAAATGGGAATAaagtgaacgtttcaagatcccggtcgggttt
SPL01_0008_H03.b : AGCTCTGTATCAAAGCAGAGATGGGAATAGAGTTGACAGTTCAAGATACACAGTCGGTTT
20110601C-015201 : TTTCACCTCAGAGATACTTCAACATTGACCCCAACACAACCCAAGCCTCCGGGAACTGTG
---------+---------+---------+---------+---------+---------+ 991
LNG01_0001_H06.b : TTTCACCTCAGAGATACTTCAACATTGACCCCcaacacaccccaagcctcccgggaactg
OVRT1_0020_H06.b : TTTCACCTCAGAGATACTTCANCATTGACCCCnnacacaccccagccctcgggaaactgt
DCI01_0015_D03.b : ttcacctccaaaatctttcaaattgaccccaaccaacccaaccctccgggaaaggggtct
SPL01_0008_H03.b : TTTCACCTCAGAGATACTTCAACATTGACCCCAACACAACCCAAGCCTCCGGGAACTGTG
20110601C-015201 : GCTCCCGAAAATCCAAGCTTCTCCTGAATTTCCAGGGCGGATTTGTGAATCTCACATTTA
---------+---------+---------+---------+---------+---------+ 1051
LNG01_0001_H06.b : tgggctcccgaaaaatccaagcttcctcctgaatttcccggggcggaatttggtgaattc
OVRT1_0020_H06.b : gctccngaaatccaagcttctcctgaatttcagggncgatttgtgaactcacatttacaa
DCI01_0015_D03.b : ccgaaaatcaaccttccccgaatttccggggggattgggaacctcttttccagggagaaa
SPL01_0008_H03.b : GCTCCCGAAAATCCAAGCTTCTCCTGAATTTCCAGGGCGGATTTGTGAATCTCACATTTA
20110601C-015201 : CCAAGGATGAAAACTCGTATTATGTCAGTGGAGTGGGAGCCTATCTGACCGTCTCAAATC
---------+---------+---------+---------+---------+---------+ 1111
LNG01_0001_H06.b : tcacaatttacccaggggatgaaaaaacttcttaatttatggttccagtggggattgggg
OVRT1_0020_H06.b : ggatgaaactcgtatatgtcagtggaatggagcctactgaccgtctcaatccggagaggt
DCI01_0015_D03.b : ctctttttgtcggtgagggggaccttattaacttccaatccggcttggggttccagccgg
SPL01_0008_H03.b : CCAAGGATGAAAACTCGTATTATGTCAGTGGAGTGGGAGCCTATCTGACCGTCTCAAATC
20110601C-015201 : CAGAGAAAGTTTACCAAGGAATGAAAAATGCTGTGGTGATGTTTGAGACCATGATCGGGC
---------+---------+---------+---------+---------+---------+ 1171
LNG01_0001_H06.b : gaagccccttttctctgaacccctttctttaaaattcc
OVRT1_0020_H06.b : tacnaggatgaaaatgctgggtgatgttaaaacagatcggccctcctccaggctaaggaa
DCI01_0015_D03.b : gtagaatccccgcgcccggagatacaccttgggaccccggattttagctctgtgggggcg
SPL01_0008_H03.b : CAGAGAAAGTTTACCAAGGAATGAAAAATGCTGTGGTGATGTTTGAGACCATGATCGGGC
20110601C-015201 : ACTCCTTCAAGTGCATAAGTGAACAGAGTATCCAGCTGTCACCCCACCTTCAGCTGAACA
---------+---------+---------+---------+---------+---------+ 1231
LNG01_0001_H06.b :
OVRT1_0020_H06.b : aaaaatccgcgttccccccttccttaaaaaagaagtcacttcggcttgattcaaagacac
DCI01_0015_D03.b : ggttaacctccccgggggaaaatttggtacctggtcccaaagaactccccccctttttta
SPL01_0008_H03.b : ACTCCTTCAAGTGCATAAGTGAACAGAGTATCCAGCTGTCACCCCACCTTCAGCTGAACA
20110601C-015201 : CAATGAACGTCCAGCTTCAGGCCTTTGATTTCGAAGATGACCACTTTGGAAATGTGGACG
---------+---------+---------+---------+---------+---------+ 1291
LNG01_0001_H06.b :
OVRT1_0020_H06.b : tgtgaagggaaggtttcgaaaccaatttctcgttatgggcatgcggccccgcggggtttt
DCI01_0015_D03.b : caattcacatttttgaaacgcgcgaactcgaccaaatctaagaggttctcttcctccggg
SPL01_0008_H03.b : CAATGAACGTCCAGCTTCAGGCCTTTGATTTCGAAGATGACCACTTTGGAAATGTGGACG
20110601C-015201 : AGTGTTCATCTGACTACACAATTGTGCTTCCTGTGATTGGGGCCATTGTGCTTGGTCTCT
---------+---------+---------+---------+---------+---------+ 1351
LNG01_0001_H06.b :
OVRT1_0020_H06.b : ttttgacccccagggaatcttaaaaaatatgggcccgaaaaaaaaaactgtctcgggggg
DCI01_0015_D03.b : ggctaaaaattttgaacggcacacccnttatcccgggccattttttaaaaaaaacttcta
SPL01_0008_H03.b : AGTGTTCATCTGACTACACAATTGTGCTTCCTGTGATTGGGGCCATTGTGCTTGGTCTCT
20110601C-015201 : GTGCTGTGGGTTTGATTGTCTATGGAATCCGCCTAAAGCGTGAATCATCTGAATACCAGA
---------+---------+---------+---------+---------+---------+ 1411
LNG01_0001_H06.b :
OVRT1_0020_H06.b : cgcaaaaaacaccccccccaaaaatgtttttttttt
DCI01_0015_D03.b : atgcgggaaaaacaaaaagctc
SPL01_0008_H03.b : GTGCTGTGGGTTTGATTGTCTATGGAATCCGCCTAAAGCGTGAATCATCTGAATACCAGA
20110601C-015201 : GAATCTAACTGGTGCCCCACGGGAAAAAAAAAAAAACCTGGA..................
---------+---------+---------+---------+---------+---------+ 1453
LNG01_0001_H06.b :
OVRT1_0020_H06.b :
DCI01_0015_D03.b :
SPL01_0008_H03.b : GAATCTAACTGGTGCCCCACGGGAAAAAAAAAAAAACCTGGAgtgtggagaagtcttcct
20110601C-015201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1453
LNG01_0001_H06.b :
OVRT1_0020_H06.b :
DCI01_0015_D03.b :
SPL01_0008_H03.b : ttcgtttccaggatgttgagggacttcctgtagaagaaggggtctttccaacaatgtgaa
20110601C-015201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1453
LNG01_0001_H06.b :
OVRT1_0020_H06.b :
DCI01_0015_D03.b :
SPL01_0008_H03.b : ccccccatccttcacaaaaaaccaaaatcattttctgatttcaagttcaaggcagcccca
20110601C-015201 : ............................................................
---------+---------+---------+---------+---------+---------+ 1453
LNG01_0001_H06.b :
OVRT1_0020_H06.b :
DCI01_0015_D03.b :
SPL01_0008_H03.b : ttcgatttccaaaaaaatt