[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-002382

Length: 1,253

Sequence [FASTA format sequence]
GTAGAGAAAT CGAAACTACT GGGGAAACAG AGCACCCCGG CACATCCCCT CTCCAGACCA
CAGCTTCTCC TGGGCACCAT GAACTGCGCT TCCCAGCCCT TCTTCACTGG TGCCCATGGA
GGACCCCCAA CATATGAGAT GCTCAAGGAG GAGCACGAGG TGGCCGTGCT GGGGGCTCCC
CAGACCTCAG CCCCCGTGGC CACCACGGTG ATCAACATCC GAAGCGAGAC CTCCGTGCCC
GACCACGTCG TCTGGTCCCT GTTCAACACC CTCTTCATGA ACTGGTGCTG CCTGGGCTTC
GTGGCTTTCG CCTACTCCGT GAAGGCGAGG GACCGGAAGA TGGTGGGAGA CATCACTGGG
GCCCAGAGCT ATGCCTCCAC CGCCAAGTGC CTGAACATCT GGGCTCTGAT CCTGGGCCTC
ATTCTGACCA TCGGAGCCAC TGTTCTTCTG GTGTTTGTAT ACATAACAGC CTACCAGATG
TTAGAGCGCG CAAAGAATAA CAGAGGCTAC TAGCAGCCAT CCACGGCCCA GCCCAAGTCC
CCCACCATCC ACATTGGCCC TGCCCCACCC CCTCCCTTCC TACAGGACTT GCAACCAGGG
AGGCACAGAT TCAAGTAGCA AGAGTCCCAC GTGCTCTGAG GAAAGCAGAG AGGCAGGGCT
GGGGAACACC CACCACCAAG ACCTTCCAGA GAAGTTACAG GCTCGCCTTA CAGACGGGGG
CTGGTGCCAG CAGAGGGTCA GTCACTAGGC ATCCGCAGCT GATCGGTTGC CAGACCCGGG
TTTCCAGGGA GGGAAGAAAC CGAGTTCCAG GCGGTCCCAG GATGGCCAGG GTGTGAGTCA
GTTCATATCC CCGGGGGCTT CCTGGCCCCA TTTCAGCCCC TCCGGTGCAT CTGAAGGGGC
TGAAATGGGT GGACCTCCGT GTGTGCAAAG TCCTCGTGGG GCTCCCGGCT CGGGGACCCC
TTGCAGGGGA ACCTGAATTC CCGGGCTGGG GGGAGGGGGG GGGGGGGTCC CCCCCTCCCC
CCTCCTGGGA ACCAACACCC CCCCGTGGGC CCCCCCCCCC TTTTAGGGGG GAAAGAAAAA
ACCCCCCTCG CCCCCTGCCC CCTGCCCCCC TGGAAAAAAA CACCCCCCCC CTTTCCCCCC
TCAAAATCCC CCCCCCCCGG GGTTTTCCTC CCCCCCCCGG GCCCTCCCCC CCCAAAAAGA
TTTTGGGGGG GGGGGGCCCC CCCCTTTTTT GGGGGGGGGT GTGTGGCCCC CCC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIFITM3interferon-induced transmembrane protein 3 [Homo sapiens]. 1772e-44O
Contig/Assembly ProteinIFITM2interferon-induced transmembrane protein 2 [Homo sapiens]. 1694e-42O
Contig/Assembly ProteinIFITM1interferon-induced transmembrane protein 1 [Homo sapiens]. 1625e-40O
Contig/Assembly ProteinIFITM5interferon-induced transmembrane protein 5 [Homo sapiens]. 83.25e-16O
Contig/Assembly ProteinIFITM10interferon-induced transmembrane protein 10 [Homo sapiens]. 76.36e-14


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIfitm3interferon-induced transmembrane protein 3 [Mus musculus]. 1663e-41O
Contig/Assembly ProteinIfitm2interferon-induced transmembrane protein 2 [Mus musculus]. 1503e-36O
Contig/Assembly ProteinLOC631287PREDICTED: interferon-induced transmembrane protein 3-like [Mus musculus]. 1502e-36O
Contig/Assembly ProteinGm5331PREDICTED: interferon-induced transmembrane protein 3-like [Mus musculus]. 1333e-31O
Contig/Assembly ProteinGm5331PREDICTED: interferon-induced transmembrane protein 3-like [Mus musculus]. 1333e-31O
Contig/Assembly ProteinIfitm1interferon-induced transmembrane protein 1 [Mus musculus]. 1294e-30O
Contig/Assembly ProteinIfitm1interferon-induced transmembrane protein 1 [Mus musculus]. 1294e-30O
Contig/Assembly ProteinIfitm7interferon induced transmembrane protein 7 [Mus musculus]. 1296e-30O
Contig/Assembly ProteinIfitm6interferon induced transmembrane protein 6 [Mus musculus]. 1094e-24O
Contig/Assembly ProteinIfitm5interferon-induced transmembrane protein 5 [Mus musculus]. 76.35e-14O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475935PREDICTED: similar to Interferon-induced transmembrane protein 3 (Interferon-inducible protein 1-8U) [Canis familiaris]. 1528e-37
Contig/Assembly ProteinLOC483397PREDICTED: similar to Interferon-induced transmembrane protein 1 (Interferon-induced protein 17) (Interferon-inducible protein 9-27) (Leu-13 antigen) (CD225 antigen) [Canis familiaris]. 1441e-34O
Contig/Assembly ProteinLOC483396PREDICTED: similar to Interferon-induced transmembrane protein 3 (Interferon-inducible protein 1-8U) [Canis familiaris]. 1394e-33
Contig/Assembly ProteinLOC606890PREDICTED: similar to IFITM5 [Canis familiaris]. 1234e-28O
Contig/Assembly ProteinLOC611537PREDICTED: similar to Interferon-inducible protein [Canis familiaris]. 77.82e-14
Contig/Assembly ProteinLOC475936PREDICTED: similar to interferon induced transmembrane protein 1 (9-27) [Canis familiaris]. 77.82e-14O
Contig/Assembly ProteinLOC610043PREDICTED: similar to olfactory receptor 973 [Canis familiaris]. 72.49e-13O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC777594interferon induced transmembrane family member [Bos taurus]. 1958e-50O
Contig/Assembly ProteinLOC786073PREDICTED: interferon-induced transmembrane protein 3 (1-8U)-like [Bos taurus]. 1896e-48O
Contig/Assembly ProteinIFITM3interferon-induced transmembrane protein 3 (1-8U) [Bos taurus]. 1896e-48O
Contig/Assembly ProteinIFITM3PREDICTED: interferon induced transmembrane protein 3-like [Bos taurus]. 1881e-47O
Contig/Assembly ProteinIFITM3PREDICTED: interferon induced transmembrane protein 3-like [Bos taurus]. 1881e-47O
Contig/Assembly ProteinIFITM1interferon-induced transmembrane protein 1 (9-27) isoform 1 [Bos taurus]. 1788e-45O
Contig/Assembly ProteinIFITM2interferon induced transmembrane protein 2 (1-8D) [Bos taurus]. 1733e-43O
Contig/Assembly ProteinLOC100337205PREDICTED: interferon-induced transmembrane protein 3 (1-8U)-like [Bos taurus]. 1411e-33O
Contig/Assembly ProteinLOC613699PREDICTED: interferon induced transmembrane protein 2 (1-8D)-like [Bos taurus]. 1311e-30O
Contig/Assembly ProteinLOC613699PREDICTED: inteferon-induced membrane protein Leu-13/9-27-like [Bos taurus]. 1273e-29O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinIFITM3interferon-induced transmembrane protein 3 [Sus scrofa]. 2262e-59O
Contig/Assembly ProteinLOC100519082PREDICTED: interferon-induced transmembrane protein 1-like [Sus scrofa]. 2048e-53O
Contig/Assembly ProteinLOC100627004PREDICTED: interferon-induced transmembrane protein 1-like [Sus scrofa]. 1923e-49O
Contig/Assembly ProteinLOC100626247PREDICTED: interferon-induced transmembrane protein 1-like isoform 3 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinLOC100626247PREDICTED: interferon-induced transmembrane protein 1-like isoform 4 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinLOC100626247PREDICTED: interferon-induced transmembrane protein 1-like isoform 1 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinIFITM1PREDICTED: interferon-induced transmembrane protein 1 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinLOC100626247PREDICTED: interferon-induced transmembrane protein 1-like isoform 2 [Sus scrofa]. 1901e-48O
Contig/Assembly ProteinLOC100627740PREDICTED: interferon-induced transmembrane protein 3-like, partial [Sus scrofa]. 1763e-44O
Contig/Assembly ProteinLOC100621926PREDICTED: interferon-induced transmembrane protein 1-like [Sus scrofa]. 1601e-39


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVR010037D01LVR01_0037_D01.bBP443703 
LVR010051A10LVR01_0051_A10.bBP441680 AK232467
LVR010090D05LVR01_0090_D05.bCJ000635 AK394072
LVR010091E08LVR01_0091_E08.bCJ000726 
LVR010093D04LVR01_0093_D04.bCJ000874 
PBL010064E01PBL01_0064_E01.bBW971932 
PST010095E04PST01_0095_E04.bFS704353 
PTG010020E12PTG01_0020_E12.bFS706185 AK396892

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
251C200.250WNGCC/A
T600.750GTC/V


Alignment:      TOP

20110601C-002382 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0090_D05.b : gaattatgggtgaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PTG01_0020_E12.b : nccgttttnntttagacgtaagcagcxxxxxxxxxxxxxxx
LVR01_0051_A10.b : gtttttgcctcattctgcatagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PST01_0095_E04.b :
LVR01_0091_E08.b : cattttgggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0093_D04.b : cttttggttgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0037_D01.b : ccttttgagtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
PBL01_0064_E01.b : aact
20110601C-002382 : .........................GTAGAGAAATCGAAACTACTGGGGAAACAGAGCAC
---------+---------+---------+---------+---------+---------+ 35
LVR01_0090_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxGTAGAGAAATCGAAACTACTGGGGAAACAGAGCAC
PTG01_0020_E12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxgaGAAATCGAAACTACTGGGGAAACAGAGCAC
LVR01_0051_A10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAAATCGAAACTACTGGGGAAACAGAGCAC
PST01_0095_E04.b : nnnncctgcggttgctatggAATCGAAACTACTGGGGAAACAGAGCAC
LVR01_0091_E08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCGAAACTACTGGGGAAACAGAGCAC
LVR01_0093_D04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCGAAACTACTGGGGAAACAGAGCAC
LVR01_0037_D01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtACTACTGGGGAAACAGAGCAC
PBL01_0064_E01.b : gaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGAGCAC
20110601C-002382 : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
---------+---------+---------+---------+---------+---------+ 95
LVR01_0090_D05.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
PTG01_0020_E12.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
LVR01_0051_A10.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
PST01_0095_E04.b : CCCGGCACATCCCCTCTCCCGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
LVR01_0091_E08.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
LVR01_0093_D04.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
LVR01_0037_D01.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
PBL01_0064_E01.b : CCCGGCACATCCCCTCTCCAGACCACAGCTTCTCCTGGGCACCATGAACTGCGCTTCCCA
20110601C-002382 : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
---------+---------+---------+---------+---------+---------+ 155
LVR01_0090_D05.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
PTG01_0020_E12.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
LVR01_0051_A10.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
PST01_0095_E04.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
LVR01_0091_E08.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
LVR01_0093_D04.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
LVR01_0037_D01.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
PBL01_0064_E01.b : GCCCTTCTTCACTGGTGCCCATGGAGGACCCCCAACATATGAGATGCTCAAGGAGGAGCA
20110601C-002382 : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
---------+---------+---------+---------+---------+---------+ 215
LVR01_0090_D05.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
PTG01_0020_E12.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
LVR01_0051_A10.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
PST01_0095_E04.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
LVR01_0091_E08.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
LVR01_0093_D04.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
LVR01_0037_D01.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
PBL01_0064_E01.b : CGAGGTGGCCGTGCTGGGGGCTCCCCAGACCTCAGCCCCCGTGGCCACCACGGTGATCAA
20110601C-002382 : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
---------+---------+---------+---------+---------+---------+ 275
LVR01_0090_D05.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
PTG01_0020_E12.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
LVR01_0051_A10.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
PST01_0095_E04.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
LVR01_0091_E08.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGCCTGGTCCCTGTTCAACACCCTCTT
LVR01_0093_D04.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGCCTGGTCCCTGTTCAACACCCTCTT
LVR01_0037_D01.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
PBL01_0064_E01.b : CATCCGAAGCGAGACCTCCGTGCCCGACCACGTCGTCTGGTCCCTGTTCAACACCCTCTT
20110601C-002382 : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
---------+---------+---------+---------+---------+---------+ 335
LVR01_0090_D05.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
PTG01_0020_E12.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
LVR01_0051_A10.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
PST01_0095_E04.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
LVR01_0091_E08.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
LVR01_0093_D04.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
LVR01_0037_D01.b : CATGAACCGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
PBL01_0064_E01.b : CATGAACTGGTGCTGCCTGGGCTTCGTGGCTTTCGCCTACTCCGTGAAGGCGAGGGACCG
20110601C-002382 : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
---------+---------+---------+---------+---------+---------+ 395
LVR01_0090_D05.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
PTG01_0020_E12.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
LVR01_0051_A10.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
PST01_0095_E04.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
LVR01_0091_E08.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
LVR01_0093_D04.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
LVR01_0037_D01.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
PBL01_0064_E01.b : GAAGATGGTGGGAGACATCACTGGGGCCCAGAGCTATGCCTCCACCGCCAAGTGCCTGAA
20110601C-002382 : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
---------+---------+---------+---------+---------+---------+ 455
LVR01_0090_D05.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
PTG01_0020_E12.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
LVR01_0051_A10.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
PST01_0095_E04.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
LVR01_0091_E08.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
LVR01_0093_D04.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
LVR01_0037_D01.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
PBL01_0064_E01.b : CATCTGGGCTCTGATCCTGGGCCTCATTCTGACCATCGGAGCCACTGTTCTTCTGGTGTT
20110601C-002382 : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
---------+---------+---------+---------+---------+---------+ 515
LVR01_0090_D05.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
PTG01_0020_E12.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
LVR01_0051_A10.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
PST01_0095_E04.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
LVR01_0091_E08.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
LVR01_0093_D04.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
LVR01_0037_D01.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
PBL01_0064_E01.b : TGTATACATAACAGCCTACCAGATGTTAGAGCGCGCAAAGAATAACAGAGGCTACTAGCA
20110601C-002382 : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
---------+---------+---------+---------+---------+---------+ 575
LVR01_0090_D05.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
PTG01_0020_E12.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
LVR01_0051_A10.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
PST01_0095_E04.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
LVR01_0091_E08.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
LVR01_0093_D04.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
LVR01_0037_D01.b : GCCATCCACGGCCCAGCCCAAGTCCCCCACCATCCACATTGGCCCTGCCCCACCCCCTCC
PBL01_0064_E01.b : GCCATCCACGGCCCAGCCCAAGTCCCCCGCCATCCACATTGGCCCTGCCCCACCCCCTCC
20110601C-002382 : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
---------+---------+---------+---------+---------+---------+ 635
LVR01_0090_D05.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
PTG01_0020_E12.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
LVR01_0051_A10.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
PST01_0095_E04.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
LVR01_0091_E08.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
LVR01_0093_D04.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
LVR01_0037_D01.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
PBL01_0064_E01.b : CTTCCTACAGGACTTGCAACCAGGGAGGCACAGATTCAAGTAGCAAGAGTCCCACGTGCT
20110601C-002382 : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
---------+---------+---------+---------+---------+---------+ 695
LVR01_0090_D05.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
PTG01_0020_E12.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
LVR01_0051_A10.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
PST01_0095_E04.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAGCACCCACCACCAAGACCTTCCAGAGAAGT
LVR01_0091_E08.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
LVR01_0093_D04.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
LVR01_0037_D01.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
PBL01_0064_E01.b : CTGAGGAAAGCAGAGAGGCAGGGCTGGGGAACACCCACCACCAAGACCTTCCAGAGAAGT
20110601C-002382 : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
---------+---------+---------+---------+---------+---------+ 755
LVR01_0090_D05.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
PTG01_0020_E12.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTANGCATCCG
LVR01_0051_A10.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTANGCATCCG
PST01_0095_E04.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
LVR01_0091_E08.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
LVR01_0093_D04.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
LVR01_0037_D01.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
PBL01_0064_E01.b : TACAGGCTCGCCTTACAGACGGGGGCTGGTGCCAGCAGAGGGTCAGTCACTAGGCATCCG
20110601C-002382 : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCAGGG*A*GGGAAGAAACCGAGTT*CCAG
---------+---------+---------+---------+---------+---------+ 810
LVR01_0090_D05.b : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCAGGG*AAGGGAAGAAACCGAGTT*CCAG
PTG01_0020_E12.b : CAGCTGATCGGGTGCC*AGACCGGGNTTT*CCAGGA*A*GGGAAGAAACCGAGTC*CCAG
LVR01_0051_A10.b : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCAGGG*A*GGGAAGAAACCGAGTT*CCAG
PST01_0095_E04.b : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCAGGG*A*GGGAAGAAACCGAGTT*CCAG
LVR01_0091_E08.b : CAGCTGATCGGTTGCC*AGACCCGGGTTTTCCGGGG*AGGGGAAGAAACCGAATTTCCAA
LVR01_0093_D04.b : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCCGGG*A*GGGAAGAAACCGAGTT*CCAG
LVR01_0037_D01.b : CAGCTGATCGGTTGCCCAGACCCGGGTTTCCCAGGGGAAGGGAAGAAACCGAGTT*CCAG
PBL01_0064_E01.b : CAGCTGATCGGTTGCC*AGACCCGGGTTT*CCAGGG*A*GGGAAGAAACCGAGTT*CCAG
20110601C-002382 : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTCATATCCCCGGGGG**CTTCCTGGC
---------+---------+---------+---------+---------+---------+ 866
LVR01_0090_D05.b : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTCATATCCCCC*GGG**CTTCCTGGC
PTG01_0020_E12.b : CCGTCCCCA*G**ATGGGCAGGGTGTGAGTCAGTTCATATCCCCG*GGG**CTTCTTG*C
LVR01_0051_A10.b : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTCATATCCCCGGGGG**CTTCCTGGC
PST01_0095_E04.b : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTCATATCCCCGGGGcttcctggcccc
LVR01_0091_E08.b : GCGGTCCCAGGGATGGCCCAGGGGGTGAGTCAGTTCATATCCCCGGGGC**TTTCTGGGC
LVR01_0093_D04.b : GCGGTCCCAGG**ATGGCCCAGGTGTGAGTCAGTTCATATCCCCG*GGG**CTTCCTGGC
LVR01_0037_D01.b : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTTATATCCCCGGGGGGCTTTCTTGGC
PBL01_0064_E01.b : GCGGTCCCAGG**ATGGCCAGGGTGTGAGTCAGTTCATATCCCCG*GGG**CTTCCTGCC
20110601C-002382 : CCCATTTCAGCCCCTCC***GGTGCATCTGAAGGGGCTGAAATGGGTGGACCTCCGTGTG
---------+---------+---------+---------+---------+---------+ 923
LVR01_0090_D05.b : CCCCATTCACCCCCTCC***GGTGCCTCTGAAGGGGCTGAAATGGGTGGACCTCCGTGTG
PTG01_0020_E12.b : CCCATTTCAGCCCCT*C***CGTGCATCTGAAGGGGCTGAAATGGGTGGACTTCCGgggt
LVR01_0051_A10.b : CCCATTTCAGCCCCTCT***GGTGCATCTGAAGGGGCTGAAATGGGTGGACCTCCGTGTG
PST01_0095_E04.b : atttcagcccctccggtgcatctgaaagggctgaaatgggtggacctccgtgtgtgcaga
LVR01_0091_E08.b : CCCATTTCACCCCCCCC***GGTGCATCTGAAGGGGgctgaaatggggtggaccttccgt
LVR01_0093_D04.b : CCCATTTCAGCCCCTCC***GGTGCATCTGAAGGGGCTGAAAatgggtggaacctccgtg
LVR01_0037_D01.b : CCCATTTTCAGCCCCCTCCGGGTGCTCTGAAAGGGGCTGAAATGGGTGGGACCTCCCGTG
PBL01_0064_E01.b : CCCATTTCAGCCCCCTC***CGTGCATCTGAANGGGCTGAAATGGGTGGACCTCCGTGTG
20110601C-002382 : T***GCAAAGTCCTCGTGGGGCTCCCGGCTCGGGGACCCCTTGCAGGGGAACCTGAATTC
---------+---------+---------+---------+---------+---------+ 980
LVR01_0090_D05.b : T***GCAGAGTCctcctggggctccggctccggacccctgccggggaccttgactccccg
PTG01_0020_E12.b : gcaaagtcctcctgggctcccgcctcggaaccctgcaggggaccgactcccggctgggaa
LVR01_0051_A10.b : T***GCAAAATCCTCGTGGGgctccggctcgggacgcctgcaggggacctgaatcgcggc
PST01_0095_E04.b : gtcctcgtgggctccggctcgggacgcctgcaggggacctgactcgcggctgggggaggg
LVR01_0091_E08.b : gtgtgcaaagtcctcgtgggcttcgggttcgggaacccctgcagggaactggactcccgg
LVR01_0093_D04.b : gggtggcagagtcctcgggggctcccggctcgggaacccctggcggggaacctgaattcc
LVR01_0037_D01.b : TGTGGCAAAGTCCCCCGGGGGCTCCCGGCTCGGGGACCCCTTGCAGGGGAACCTGAATTC
PBL01_0064_E01.b : T***GCagagtcttcgtgggcttccgctcgggacgctgcaagggactgactcgncgctgg
20110601C-002382 : CCGGGCTGGGGGGAGGGGGGGGGGGGGTCCCCCCCTCCCCCCTCCTGGGAACCAACACCC
---------+---------+---------+---------+---------+---------+ 1040
LVR01_0090_D05.b : cttggggaaggggggcggggtccgccctcccaccctttgggaaaacccagccccccatgg
PTG01_0020_E12.b : aggggccgggtcccccctccccctctggaaaaaaccccagggccccccccctcagggaag
LVR01_0051_A10.b : tgggggaagggggcgggggtcc
PST01_0095_E04.b : ggcggggtccgccgtcacctctggaaaacagccccatggccccccctcttcaggggagga
LVR01_0091_E08.b : ctgggggaaagggggcgggggcccccccgtccaccccctgggaaaacccgacccccaggg
LVR01_0093_D04.b : cggctggggggaggggggcggggtcccgccctcccacctctgggaaaacaacgccccagg
LVR01_0037_D01.b : CCGGGCTGGGGGGAGGGGGGGGGGGGGTCCCCCCCTCCCCCCTCCTGGGAACCAACACCC
PBL01_0064_E01.b : gggagggggcggggtccccttccacctctggaaaccagccccagtggccccgctcttcag
20110601C-002382 : CCCCGTGGGCCCCCCCCCCCTTTTAGGGGGGAAAGAAAAAACCCCCCTCGCCCCCTGCCC
---------+---------+---------+---------+---------+---------+ 1100
LVR01_0090_D05.b : gcccccccgcccctttcaggggggaaggaaaaaaccccccggccccctgcccccccgccc
PTG01_0020_E12.b : aaaacccgtgcctgccccccctggaaattaccctggcctgatacccgggtttcccgggct
LVR01_0051_A10.b :
PST01_0095_E04.b : aagccctgcccgcccctgcctggaatcaccccctgtcctgatccgccggtctgcccggtt
LVR01_0091_E08.b : ggccccccccccttttagggggggagggaaaaaacccccctgccccgggcccctggcccc
LVR01_0093_D04.b : gggcccccgttttttcgggggggaaagaaaagcccccggccccgcccctggcccgggaaa
LVR01_0037_D01.b : CCCCGTGGGCCCCCCCCCCCTTTTAGGGGGGAAAGAAAAAAcccccctcgccccctgccc
PBL01_0064_E01.b : ggggaggaaagccctgcctgccctgccctgaaataacccctgtcctgaatccccggtctg
20110601C-002382 : CCTGCCCCCCTGGAAAAAAACACCCCCCCCCTTTCCCCCCTCAAAATCCCCCCCCCCCGG
---------+---------+---------+---------+---------+---------+ 1160
LVR01_0090_D05.b : ccgtggaaaaaaaccaccccccctttgtcccccctgtaatttccccccccccgggtgttt
PTG01_0020_E12.b : caaaatggggcctttggggccccgggaaaaactccccacaccctggaaacctgggtgaac
LVR01_0051_A10.b :
PST01_0095_E04.b : caaatgtgcggcccttgggggccccggggaaaactcccccacccactgggaacttgcggg
LVR01_0091_E08.b : tggaaaaaaaaaaccccccctggcccccttgatattccccccccccgcttttttgtgccc
LVR01_0093_D04.b : aaacacccccctgttcccctaattcccccccggggtttttccccccggggtgctcccaaa
LVR01_0037_D01.b : cctgcccccctggaaaaaaacaccccccccctttcccccctcaaaatcccccccccccgg
PBL01_0064_E01.b : cccggctcaaaattgcgggccttgggggcccggggcaaccctcccaacccactagcactc
20110601C-002382 : GGTTTTCCTCCCCCCCCCGGGCCCTCCCCCCCCAAAAAGATTTTGGGGGGGGGGGGCCCC
---------+---------+---------+---------+---------+---------+ 1220
LVR01_0090_D05.b : tcctcgccccgcggcggcccctccccccaaaaaaaatggtttgggcgggcggggggcc
PTG01_0020_E12.b : caaagggaaaattttgttcccctctaaaaaagaggaggggaccctgagaaaaatgtcctc
LVR01_0051_A10.b :
PST01_0095_E04.b : taaccgaggggacagtttcttccctccccgaaccgatggggcggacccccgggaaaaaag
LVR01_0091_E08.b : cgcggggcattccacaaaaaaagattatggggggggcccccccctttgtggggggggggc
LVR01_0093_D04.b : aattggtggggggggccccttttgtggggggtggcccccccgcgggggggagacaaaaaa
LVR01_0037_D01.b : ggttttcctcccccccccgggccctccccccccAAAAAGATTTTGGGGGGGGGGGGCCCC
PBL01_0064_E01.b : cggggaacccaaggggcagtttctttcctcctgaaccgaggaggggacccctggaaaaat
20110601C-002382 : CCCCTTTTTTGGGGGGGGGTGTGTGGCCCCCCC...........................
---------+---------+---------+---------+---------+---------+ 1253
LVR01_0090_D05.b :
PTG01_0020_E12.b : ccgggaaaaagtaggggggcaaaaaaccaaacccccccccccccccccgg
LVR01_0051_A10.b :
PST01_0095_E04.b : tttgccataggaaacaaggtgggctctgactctaacctcccccccccctccccaaagcaa
LVR01_0091_E08.b : tcccccccccccggggggggggccaagaaaaaaa
LVR01_0093_D04.b : aacccccccctcccccccccacc
LVR01_0037_D01.b : CCCCTTTTTTGGGGGGGGGTGTGTGGCCCCCCC
PBL01_0064_E01.b : tctgccaacggaataaggagggacaaaacccaaatccccccccccccccagaaaaaggaa
20110601C-002382 : ............................................................
---------+---------+---------+---------+---------+---------+ 1253
LVR01_0090_D05.b :
PTG01_0020_E12.b :
LVR01_0051_A10.b :
PST01_0095_E04.b : aggagagggattggtaaattagtccacccaaggctatgggccgacctctctcctaaaacc
LVR01_0091_E08.b :
LVR01_0093_D04.b :
LVR01_0037_D01.b :
PBL01_0064_E01.b : aggcttttaaatttgtcacccagggcttcgggcccccaccccccaaaacaacccaggggt
20110601C-002382 : ............................................................
---------+---------+---------+---------+---------+---------+ 1253
LVR01_0090_D05.b :
PTG01_0020_E12.b :
LVR01_0051_A10.b :
PST01_0095_E04.b : aaaccattggggcgtttttaaaaggggaaaagaaaaaatttgtataaaaaacccct
LVR01_0091_E08.b :
LVR01_0093_D04.b :
LVR01_0037_D01.b :
PBL01_0064_E01.b : ttttttaatgggaaaaaagagtttaaaaaaagtgttgggccttggggacccttttgaaat
20110601C-002382 : ............................................................
---------+---------+---------+---------+---------+---------+ 1253
LVR01_0090_D05.b :
PTG01_0020_E12.b :
LVR01_0051_A10.b :
PST01_0095_E04.b :
LVR01_0091_E08.b :
LVR01_0093_D04.b :
LVR01_0037_D01.b :
PBL01_0064_E01.b : aaagccctcggaa