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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-004159

Length: 967

Sequence [FASTA format sequence]
AAAACTGAAA GTGCTGGGCT TCTGGCGCTA GACGCCAGGC CCCCCGGCGG ATTTTCATCT
CCCCCGTCAC GAGCTGTTGC TGCTTCAAGT TGGGAAGCCA GACAAACAGT AAAATATGAA
CGGAAGAGTG GATTATTTGG TTACTGAGGA AGAAATCAGT CTCACCAGAG GACCCTCAGG
TCTGGGCTTC AACATCGTCG GTGGGACAGA TCAGCAGTAT GTCTCCAATG ACAGTGGCAT
CTTCGTCAGC CGCATCAAAG AGAATGGGGC TGCAGCCCTG GATGGGCGGC TCCAGGAGGG
TGATAAGATC CTCTCGGTAA ATGGCCAGGA CCTAAAGAAC CTGCTGCACC AGGATGCTGT
AGACCTCTTT CGTAATGCAG GCTACACTGT GTCCCTGAGA GTGCAGCACA GGTCACAGGT
GCAGAATGGG CCTGTGGGAC ATCAAGGTGA TGGGGAACCA AGTGGTATTC CCATAACTGT
GGTGCTGGTG CCAGTGTTTG CCCTCATCAT GGTAGCAGCC TGGGCCTTCA TGAGATACCG
CCATCAACCT TGAAAAGCTC GCTTTCTTCC AGTGCTCCCA AAGAAGAACA CACATCCCTT
TCTCTGACCT TCCTCCCCTG CCGTTCTCCC ATAACTTTCC CTTCCCCACA TGGCCAACTC
ATGATTTAAA GAGACTGTTA CCCAACCAGA ACCTTGCTGT TTGAAATCTT TGGTGGGAGA
GTAAAGGCAT TGTTTGAAGG AAAACTGAAG AAAGGACTTG CTTGGAACAA ATGAAGAGTT
ATTTATGTTA GTAGGACCGC CAGAAGTTCA GCTATAACCC AAAAAAGAAA AGGCCCAGTC
TTCTCATCAC CATGGGTGAT TCTTTCTTTT CCTAGCTGGC ATGTGTCAAA GGCCCAGCAT
AAGAGAAAGT AAGGATTTTT CCTTTCATTA ATCTTCCTTG GGAAGTTTCT GTGGCCTTTT
ATTTATT


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSYNJ2BPsynaptojanin-2-binding protein [Homo sapiens]. 2692e-72O
Contig/Assembly ProteinSYNJ2BP-COX16SYNJ2BP-COX16 protein isoform 1 [Homo sapiens]. 2462e-65O
Contig/Assembly ProteinSYNJ2BP-COX16SYNJ2BP-COX16 protein isoform 2 [Homo sapiens]. 1963e-50O
Contig/Assembly ProteinSYNJ2BP-COX16SYNJ2BP-COX16 protein isoform 3 [Homo sapiens]. 1932e-49O
Contig/Assembly ProteinDLG1disks large homolog 1 isoform 3 [Homo sapiens]. 88.21e-17
Contig/Assembly ProteinDLG1disks large homolog 1 isoform 4 [Homo sapiens]. 88.21e-17
Contig/Assembly ProteinDLG1disks large homolog 1 isoform 1 [Homo sapiens]. 88.21e-17
Contig/Assembly ProteinDLG1disks large homolog 1 isoform 2 [Homo sapiens]. 88.21e-17
Contig/Assembly ProteinDLG1disks large homolog 1 isoform 5 [Homo sapiens]. 88.21e-17
Contig/Assembly ProteinDLG2disks large homolog 2 isoform 3 [Homo sapiens]. 85.95e-17O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSynj2bpsynaptojanin-2-binding protein [Mus musculus]. 2523e-67O
Contig/Assembly ProteinDlg1disks large homolog 1 [Mus musculus]. 87.41e-17
Contig/Assembly ProteinDlg4disks large homolog 4 isoform 2 [Mus musculus]. 85.94e-17
Contig/Assembly ProteinDlg2disks large homolog 2 isoform 1 [Mus musculus]. 85.94e-17
Contig/Assembly ProteinDlg4disks large homolog 4 isoform 1 [Mus musculus]. 85.94e-17
Contig/Assembly ProteinDlg3disks large homolog 3 isoform 1 [Mus musculus]. 83.62e-16
Contig/Assembly ProteinDlg3disks large homolog 3 isoform 2 [Mus musculus]. 83.62e-16
Contig/Assembly ProteinDlg3disks large homolog 3 isoform 3 [Mus musculus]. 75.56e-14O
Contig/Assembly ProteinDlg2disks large homolog 2 isoform 2 [Mus musculus]. 75.18e-14O
Contig/Assembly ProteinMpdzmultiple PDZ domain protein [Mus musculus]. 74.71e-13


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC490757PREDICTED: similar to Synaptojanin 2 binding protein (Mitochondrial outer membrane protein 25) [Canis familiaris]. 2641e-70O
Contig/Assembly ProteinLOC488036PREDICTED: similar to synapse-associated protein 97 [Canis familiaris]. 88.21e-17
Contig/Assembly ProteinLOC489462PREDICTED: similar to postsynaptic density protein 95 [Canis familiaris]. 85.95e-17
Contig/Assembly ProteinLOC491942PREDICTED: similar to synapse-associated protein 102 isoform 5 [Canis familiaris]. 83.63e-16
Contig/Assembly ProteinLOC485158PREDICTED: similar to Channel associated protein of synapse-110 (Chapsyn-110) (Discs, large homolog 2) [Canis familiaris]. 83.63e-16
Contig/Assembly ProteinLOC491942PREDICTED: similar to synapse-associated protein 102 isoform 1 [Canis familiaris]. 83.63e-16
Contig/Assembly ProteinLOC491942PREDICTED: similar to synapse-associated protein 102 isoform 4 [Canis familiaris]. 75.57e-14O
Contig/Assembly ProteinLOC474708PREDICTED: similar to multiple PDZ domain protein [Canis familiaris]. 73.92e-13
Contig/Assembly ProteinLOC488762PREDICTED: similar to interleukin 16 isoform 3 [Canis familiaris]. 72.46e-13
Contig/Assembly ProteinLOC488762PREDICTED: similar to interleukin 16 isoform 2 isoform 4 [Canis familiaris]. 72.46e-13


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSYNJ2BPsynaptojanin-2-binding protein [Bos taurus]. 2684e-72O
Contig/Assembly ProteinDLG1PREDICTED: discs, large homolog 1 (Drosophila) [Bos taurus]. 87.81e-17
Contig/Assembly ProteinDLG1PREDICTED: discs, large homolog 1 (Drosophila) [Bos taurus]. 87.81e-17
Contig/Assembly ProteinDLG4disks large homolog 4 [Bos taurus]. 85.95e-17
Contig/Assembly ProteinDLG4PREDICTED: disks large homolog 4-like [Bos taurus]. 85.95e-17
Contig/Assembly ProteinLOC100336924PREDICTED: chapsyn-110-like [Bos taurus]. 85.95e-17
Contig/Assembly ProteinDLG2PREDICTED: discs, large homolog 2 (Drosophila) isoform 1, partial [Bos taurus]. 83.62e-16
Contig/Assembly ProteinMPP3PREDICTED: discs, large homolog 3 (Drosophila) [Bos taurus]. 83.23e-16
Contig/Assembly ProteinDLG3disks large homolog 3 [Bos taurus]. 83.23e-16
Contig/Assembly ProteinMPDZmultiple PDZ domain protein [Bos taurus]. 73.92e-13


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100514718PREDICTED: synaptojanin-2-binding protein-like [Sus scrofa]. 2514e-67O
Contig/Assembly ProteinLOC100621345PREDICTED: disks large homolog 1-like, partial [Sus scrofa]. 88.26e-18
Contig/Assembly ProteinDLG1PREDICTED: disks large homolog 1 [Sus scrofa]. 88.26e-18
Contig/Assembly ProteinLOC100627939PREDICTED: disks large homolog 2-like [Sus scrofa]. 85.93e-17
Contig/Assembly ProteinDLG4PREDICTED: disks large homolog 4, partial [Sus scrofa]. 85.93e-17
Contig/Assembly ProteinMPP3PREDICTED: disks large homolog 3 [Sus scrofa]. 83.22e-16
Contig/Assembly ProteinLOC100153161PREDICTED: LOW QUALITY PROTEIN: multiple PDZ domain protein-like [Sus scrofa]. 73.91e-13
Contig/Assembly ProteinLOC100623995PREDICTED: inaD-like protein-like, partial [Sus scrofa]. 67.89e-12
Contig/Assembly ProteinLOC100521726PREDICTED: PDZ domain-containing RING finger protein 4-like isoform 1 [Sus scrofa]. 66.23e-11
Contig/Assembly ProteinPDZD2PREDICTED: PDZ domain-containing protein 2 [Sus scrofa]. 64.77e-11


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
AMP010011F08AMP01_0011_F08.bBW955805 AK230580
AMP010012H12AMP01_0012_H12.bBW955906 
CLNT10025A11CLNT1_0025_A11.bFS658994 
DCI010074A03DCI01_0074_A03.bDB796109 
DCI010091C08DCI01_0091_C08.bDB797631 
PBL010096F12PBL01_0096_F12.bBW974628 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
162A200.333WNCAC/H
T400.667CTC/L
566C400.667W-
T200.333


Alignment:      TOP

20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0011_F08.b : ttttaccgatattaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0012_H12.b : attataccgtatctaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0074_A03.b : nnnnccgatactatagggctgctcccgcgccgxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0091_C08.b : nnnnnnccatactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0025_A11.b :
PBL01_0096_F12.b :
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
AMP01_0011_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
AMP01_0012_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0074_A03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0091_C08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0025_A11.b : nnnnccgtcagcgnacgxxxxx
PBL01_0096_F12.b :
20110601C-004159 : ...........................................AAAACTGAAAGTGCTGG
---------+---------+---------+---------+---------+---------+ 17
AMP01_0011_F08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAAACTGAAAGTGCTGG
AMP01_0012_H12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAACTGAAAGTGCTGG
DCI01_0074_A03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAACTGAAAGTGCTGG
DCI01_0091_C08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAACTGAAAGTGCTGG
CLNT1_0025_A11.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTGCTGG
PBL01_0096_F12.b : ttaagtgaaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004159 : GCTTCTGGCGCTAGACGCCAGGCCCCCCGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
---------+---------+---------+---------+---------+---------+ 77
AMP01_0011_F08.b : GCTTCTGGCGCTAGACGCCAGGCCCCCCGGCGGATTTACATCTCCCCCGTCACGAGCTGT
AMP01_0012_H12.b : GCTTCTGGCGCTAGACGCCAGGCCCCCGGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
DCI01_0074_A03.b : GCTTCTGGCGCTAGACGCCAGGCCCCCCGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
DCI01_0091_C08.b : GCTTCTGGCGCTAGACGCCAGGCCCCCCGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
CLNT1_0025_A11.b : GCTTCTGGCGCTAGACGCCAGGCCCCCCGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
PBL01_0096_F12.b : xxxxxxxxxxxxxGACGCCAGGCCCCCCGGCGGATTTTCATCTCCCCCGTCACGAGCTGT
20110601C-004159 : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
---------+---------+---------+---------+---------+---------+ 137
AMP01_0011_F08.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
AMP01_0012_H12.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
DCI01_0074_A03.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
DCI01_0091_C08.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
CLNT1_0025_A11.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
PBL01_0096_F12.b : TGCTGCTTCAAGTTGGGAAGCCAGACAAACAGTAAAATATGAACGGAAGAGTGGATTATT
20110601C-004159 : TGGTTACTGAGGAAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
---------+---------+---------+---------+---------+---------+ 197
AMP01_0011_F08.b : TGGTTACTGAGGAAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
AMP01_0012_H12.b : TGGTTACTGAGGAAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
DCI01_0074_A03.b : TGGTTACTGAGGAAGAAATCAGTCACACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
DCI01_0091_C08.b : TGGTTACTGAGGAAGAAATCAGTCACACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
CLNT1_0025_A11.b : TGGTTACTGAGGAAGAAATCAGTCTCACCAGAGGACCCTCAGGTCTGGGCTTCAACATCG
PBL01_0096_F12.b : TGGTTACTGAGGAAGAAATCAGTCTCACCAGAGGACCCCCAGGTCTGGGCTTCAACATCG
20110601C-004159 : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
---------+---------+---------+---------+---------+---------+ 257
AMP01_0011_F08.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
AMP01_0012_H12.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
DCI01_0074_A03.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
DCI01_0091_C08.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
CLNT1_0025_A11.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
PBL01_0096_F12.b : TCGGTGGGACAGATCAGCAGTATGTCTCCAATGACAGTGGCATCTTCGTCAGCCGCATCA
20110601C-004159 : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
---------+---------+---------+---------+---------+---------+ 317
AMP01_0011_F08.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
AMP01_0012_H12.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
DCI01_0074_A03.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
DCI01_0091_C08.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
CLNT1_0025_A11.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
PBL01_0096_F12.b : AAGAGAATGGGGCTGCAGCCCTGGATGGGCGGCTCCAGGAGGGTGATAAGATCCTCTCGG
20110601C-004159 : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
---------+---------+---------+---------+---------+---------+ 377
AMP01_0011_F08.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
AMP01_0012_H12.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
DCI01_0074_A03.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
DCI01_0091_C08.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
CLNT1_0025_A11.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCGCCAGGATGCTGTAGACCTCTTTCGTAATG
PBL01_0096_F12.b : TAAATGGCCAGGACCTAAAGAACCTGCTGCACCAGGATGCTGTAGACCTCTTTCGTAATG
20110601C-004159 : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
---------+---------+---------+---------+---------+---------+ 437
AMP01_0011_F08.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
AMP01_0012_H12.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
DCI01_0074_A03.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
DCI01_0091_C08.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
CLNT1_0025_A11.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
PBL01_0096_F12.b : CAGGCTACACTGTGTCCCTGAGAGTGCAGCACAGGTCACAGGTGCAGAATGGGCCTGTGG
20110601C-004159 : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
---------+---------+---------+---------+---------+---------+ 497
AMP01_0011_F08.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
AMP01_0012_H12.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
DCI01_0074_A03.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
DCI01_0091_C08.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
CLNT1_0025_A11.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGC
PBL01_0096_F12.b : GACATCAAGGTGATGGGGAACCAAGTGGTATTCCCATAACTGTGGTGCTGGTGCCAGTGT
20110601C-004159 : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
---------+---------+---------+---------+---------+---------+ 557
AMP01_0011_F08.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
AMP01_0012_H12.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
DCI01_0074_A03.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
DCI01_0091_C08.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
CLNT1_0025_A11.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCGTCAACCTTGAAAAG
PBL01_0096_F12.b : TTGCCCTCATCATGGTAGCAGCCTGGGCCTTCATGAGATACCGCCATCAACCTTGAAAAG
20110601C-004159 : CTCGCTTTCTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
---------+---------+---------+---------+---------+---------+ 617
AMP01_0011_F08.b : CTCGCTTTCTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
AMP01_0012_H12.b : CTCGCTTTCTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTACCTCCC
DCI01_0074_A03.b : CTCGCTTTTTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
DCI01_0091_C08.b : CTCGCTTTTTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
CLNT1_0025_A11.b : CTCGCTTTCTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
PBL01_0096_F12.b : CTCGCTTTCTTCCAGTGCTCCCAAAGAAGAACACACATCCCTTTCTCTGACCTTCCTCCC
20110601C-004159 : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTG
---------+---------+---------+---------+---------+---------+ 677
AMP01_0011_F08.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTG
AMP01_0012_H12.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTTCTGATTTAAAGAGACTG
DCI01_0074_A03.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTG
DCI01_0091_C08.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTG
CLNT1_0025_A11.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTG
PBL01_0096_F12.b : CTGCCGTTCTCCCATAACTTTCCCTTCCCCACATGGCCAACTCATGATTTAAAGAGACTA
20110601C-004159 : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTAAAGGCATTGTTTGA
---------+---------+---------+---------+---------+---------+ 737
AMP01_0011_F08.b : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTAAggcattgtttgaa
AMP01_0012_H12.b : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTTAAGGgcattgtttg
DCI01_0074_A03.b : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTAAAGGCATTGTTTGA
DCI01_0091_C08.b : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTAAAGGCATTTGTTGA
CLNT1_0025_A11.b : TTACCCAACCAGAACCTTGCTGTTTGNAATCTTTGGTGGGAGAGTAAAGGCATTGTTTGA
PBL01_0096_F12.b : TTACCCAACCAGAACCTTGCTGTTTGAAATCTTTGGTGGGAGAGTAAAGGCATTGTTTGA
20110601C-004159 : AGGAAAACTGAAGAAAGGACTTGCTTGGAACAAATGAAGAGTTATTTATGTTAGTAGGAC
---------+---------+---------+---------+---------+---------+ 797
AMP01_0011_F08.b : ggaaactgaagaaggacttgcttggaacaatgaagagttattttgttattggaccgccag
AMP01_0012_H12.b : aaaggaaaactgaaaaaaggactttgctgggaacaattaaaagtttatttttgttagtag
DCI01_0074_A03.b : AGG*AAACTGAAGAAAGGACTTGCTTTGGACAAATGAAGAGTTATTTATGCTAGTAGGAC
DCI01_0091_C08.b : AGGAAAACTGAAGAAAGGACTTGCTTGNAACAAATGAAGAGTTATTTATGCTAGTAGGAC
CLNT1_0025_A11.b : AGGAAAACTGAAGAAAGGACTTGCTTGGAACAAATGAAGAGTTATTTATGTTAGTANGAC
PBL01_0096_F12.b : AGGAAAACTGAAGAAAGGACTTGCTTGGAACAAATGAAGAGTTATTTATGTTAGTAGGAC
20110601C-004159 : CGCCAGAAGTTCAGCTATAACCCAAAAAAGAAAAGGCCCAGTCTTCTCATCACCATGGGT
---------+---------+---------+---------+---------+---------+ 857
AMP01_0011_F08.b : aattcaactataaccccaaaagaaaaggcccatcctcctaccccctgggtgattctttct
AMP01_0012_H12.b : gaccccccaaaatttctcccttaaacccaaaaagaaaaaggccccatcctccccaccccc
DCI01_0074_A03.b : CGCCAGAAGTTCAGCTATAACCCCAAAGAGAAAAGGCCCAGTCTTCTCATCACCATGGGT
DCI01_0091_C08.b : CGCCAGAAAGTCAGCTATAACCCAAAAGAGA*AAGGCCCAGTCTTCTCATCACCATGGGT
CLNT1_0025_A11.b : CGCCAGAAGTTCAGCTATAACCCAAGA*AGAAAAGGCCCAGTCTTCTCATCACCATGGGT
PBL01_0096_F12.b : CGCCAGAAGTTCAGCTATAACCCAAAGAGGAAAAGGCCCAGTCTTCTCATCACCATGGGT
20110601C-004159 : GATTCTTTCTTTTCCTAGCTGGCATGTGTCAAAGGCCCAGCATAAGAGAAAGTAAGGATT
---------+---------+---------+---------+---------+---------+ 917
AMP01_0011_F08.b : ttccttaacggctgtgtcaaggccacccataaaaaaagtaggatttttttttccaaactt
AMP01_0012_H12.b : atgggggaaacctttcttttcttacatggcgtggttccaagccccccccccaacaaaaaa
DCI01_0074_A03.b : GATTCTTTCTTTT*CTAGCTGGCATGTGTCAAAgccnagccataaanagaagtaagggat
DCI01_0091_C08.b : GATTCTTTCTTTTTCTAGCTGGCATGTGTCAAAGGCagccatagagaaagtaaggatttt
CLNT1_0025_A11.b : GATTCTTTCTTTTTCTAACTGGCATGTGTCAAAagccagccataagagaaagtaaggatt
PBL01_0096_F12.b : GATTCTTTCTTTTCTTAGCTGGCATGTGTCAAAGGCCCAGCATAAGAGAAAGTAAGGATT
20110601C-004159 : TTTCCTTTCATTAATCTTCCTTGGGAAGTTTCTGTGGCCTTTTATTTATT..........
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b : ccctggaaattccggggccttattaattttaaaaccccactggggcccctttgtccaaga
AMP01_0012_H12.b : gaaagggttttttttttccaaaaacttccctgggaaatttctggggccttttattatatt
DCI01_0074_A03.b : tttcttttnncatatctccctgggaagtttctgtggccttnnattanttnctagtaccta
DCI01_0091_C08.b : ctttnncatatctccntgggaattnctgtgccttnnattaattctaatactacttggtgc
CLNT1_0025_A11.b : tttcttttcaataatcttccctgggaagtttctgtgggctttattaaatttctaagtacc
PBL01_0096_F12.b : TTTCCTTTCATTAATCTTCCTTGGGAAGTTTCTGTGGCCTTTTATTTATTtctaagtacc
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b : aggcaacgggaaaaatttctttttttttccaagcacataataaaaccctcgcctaggcca
AMP01_0012_H12.b : ccaagcccccatgcagggct
DCI01_0074_A03.b : ctttggggcctactttgtatccaatgaagcaatgggaagagctttcaattttttttcaaa
DCI01_0091_C08.b : tacttngatcaaatgagcaatgaaaaagcatttcatttttttcaaagcaaatttttaatc
CLNT1_0025_A11.b : tactttgggtgcctactttggtttcaatggaggccaatgaaaaaaccattccctattttt
PBL01_0096_F12.b : tacttgggtgcctactttgtattcaatgaaggccaatgagaagagcatttctattttttt
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b : taaacaagccctggaaaatcaaggggaacccc
AMP01_0012_H12.b :
DCI01_0074_A03.b : gccatattttaaaaactttgccttataatctataaaaggacgcctttgggaaataaaaga
DCI01_0091_C08.b : cttgcgtttgatcttaaaagaaagctagggaaataaaaggggaacacctgtcccggcttc
CLNT1_0025_A11.b : ttttttcaaagcaaatatttttaaatacctttgccttattgatccattaaaaaaaaggcc
PBL01_0096_F12.b : ttcaaaagcaaatatttttaaatccctatgcttatatggccatttaaaataaatgctttt
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b :
AMP01_0012_H12.b :
DCI01_0074_A03.b : ggaaacaacctgcccctggggtcccacgggttaaaaaactctttggaaatcctcctaggg
DCI01_0091_C08.b : cagggttataaaaaccattggaatccactaaggggggaaacccttaaaagcccttgttta
CLNT1_0025_A11.b : tttagggaaaataaaaaagggagaaagaacctcgggtccctgggcttccaaggggggtta
PBL01_0096_F12.b : ggaaaaataaagaagtggaaagcaacctcggtccctggcttccacggggggtaaagataa
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b :
AMP01_0012_H12.b :
DCI01_0074_A03.b : gggggaaaccctctaaaaagccccctggtttttaaaaaaaaaacatattatcttggggat
DCI01_0091_C08.b : aaaaaaaaacaaataccggggatttccgaaatttgaggggaaacacccttcccccttaaa
CLNT1_0025_A11.b : aaaaaatctttatttgaaaatttctatcttaaagggggggggaaaaaaccctttaaaaaa
PBL01_0096_F12.b : tcttatttgagaattcaatcgtaagggggtgagaaaaagccttaaaggaaatgcccatcc
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b :
AMP01_0012_H12.b :
DCI01_0074_A03.b : tttccttt
DCI01_0091_C08.b : tggagaaatatt
CLNT1_0025_A11.b : acgcccccttcggtcttttttgaagagacaacaaacacccat
PBL01_0096_F12.b : ggttttttaagaagccaccaagccccttttaacccttgaagtaaaaaaaaaaaaaaagcc
20110601C-004159 : ............................................................
---------+---------+---------+---------+---------+---------+ 967
AMP01_0011_F08.b :
AMP01_0012_H12.b :
DCI01_0074_A03.b :
DCI01_0091_C08.b :
CLNT1_0025_A11.b :
PBL01_0096_F12.b : ctgtgttaaattgggtccggccct