Clone Information

[Other Clones] [Human Genome] [RefSeq] [UniGene] [Assembly]

Clone Name: HTMT1_0029_D11

Library: HTMT1 (Hypothalamus)
Individual: D2-14C, Unknown

Nucleotide sequence: (length: 1,015) [FASTA format sequence] TCAGGAGTGA TATCTTCCAC TATAGCCAAT CCCACCGATG TGCTAAAGAT TCGAATGCAG GCTCAAGGAA GCTTGTTCCA AGGCAGCATG ATTGGCAGCT TCATTGATAT ATACCAACAA GAAGGTACCA GGGGTCTGTG GCGGGGTGTC GTCCCAACTG CTCAGCGGGC TGCCATCGTT GTGGGAGTAG AGCTACCAGT CTACGATATT ACGAAGAAGC ACCTAATATT GTCAGGGGTG TTGGGAGACA CAATCTTAAC TCACTTTGTT TCTAGCTTTA CATGTGGCTT GGCTGGGGCT CTGGCTTCCA ATCCAGTTGA TGTGGTTCGA ACTCGCATGA TGAACCAGAG GGCAATTGTG GGGCACGTGG ACCTCTACAA GGGCACTTTG GATGGTATTT TAAAGATGTG GAAACATGAA GGCTTTTTTG CACTCTATAA AGGATTTTGG CCAAACTGGC TTCGACTTGG ACCCTGGAAC ATCATTTTTT TTATCACATA TGAGCAGCTC AAGAGGCTTC AAATCTAAGG ACTGAATTAT ATGTGAGCCA AGTTCTGTCA ACCTTTCTAC TCTTTTCTTT TCCCTTTTCC TGTGTTCTAA TGTATTTTGA CAAAGTCGTA AGTATTTACT GAACCATTTG TCTCCTAAGG TCCTTCTGAT GGAAGAATGA TAGGATGGTT CAAAATTGCT TATGTGTTTG TGTTACCATG TGAACTTTTC CCTGAGAGGA AGTATTAACA TTGAGACTCT GGCCCCAGAT TGGTATCTTC TGTGAAGATG GATACTGATG GATGACACTC AAAATGGCCT TCTCTCCAAA TGTGGGTTAA ATGTAGTTTG TTAGCCCCAG ACTTGGGCTA GAGCAGAAAG CATAGGCCAG GGCAGTTATT GTATGTTACA GACCTCGGTT CTCATTAAAA AGTATTTATT GGCAGAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAA

Deduced amino acid sequence: (length: 157) [FASTA format sequence] MQAQGSLFQG SMIGSFIDIY QQEGTRGLWR GVVPTAQRAA IVVGVELPVY DITKKHLILS GVLGDTILTH FVSSFTCGLA GALASNPVDV VRTRMMNQRA IVGHVDLYKG TLDGILKMWK HEGFFALYKG FWPNWLRLGP WNIIFFITYE QLKRLQI

SNP mapping information

SNP ID Rel. Chr. Location (cM)

BLAST on RefSeq (Human): TOP

Locus Definition Score E value FL
SLC25A14 brain mitochondrial carrier protein 1 isoform UCP5L [Homo sapiens]. 353 2e-97

SLC25A30 kidney mitochondrial carrier protein 1 [Homo sapiens]. 292 3e-79

SLC25A27 mitochondrial uncoupling protein 4 isoform 1 [Homo sapiens]. 144 1e-34

Locus	Definition	Score	E value
SLC25A14	brain mitochondrial carrier protein 1 isoform UCP5L [Homo sapiens].	353	2e-97
SLC25A30	kidney mitochondrial carrier protein 1 [Homo sapiens].	292	3e-79
SLC25A27	mitochondrial uncoupling protein 4 isoform 1 [Homo sapiens].	144	1e-34

BLAST on RefSeq (Mouse): TOP

Locus Definition Score E value FL
Slc25a14 brain mitochondrial carrier protein 1 isoform 2 [Mus musculus]. 353 9e-98

Slc25a30 kidney mitochondrial carrier protein 1 [Mus musculus]. 290 9e-79

Slc25a27 mitochondrial uncoupling protein 4 [Mus musculus]. 142 4e-34

Slc25a34 solute carrier family 25 member 34 [Mus musculus]. 79.3 4e-15

Locus	Definition	Score	E value
Slc25a14	brain mitochondrial carrier protein 1 isoform 2 [Mus musculus].	353	9e-98
Slc25a30	kidney mitochondrial carrier protein 1 [Mus musculus].	290	9e-79
Slc25a27	mitochondrial uncoupling protein 4 [Mus musculus].	142	4e-34
Slc25a34	solute carrier family 25 member 34 [Mus musculus].	79.3	4e-15

BLAST on RefSeq (Dog): TOP

Locus Definition Score E value FL
LOC612910 PREDICTED: similar to Brain mitochondrial carrier protein-1 (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5) (Solute carrier family 25, member 14) isoform 5 [Canis familiaris]. 355 4e-98

LOC609084 PREDICTED: similar to solute carrier family 25, member 30 [Canis familiaris]. 271 9e-73

UCP1 mitochondrial brown fat uncoupling protein 1 [Canis lupus familiaris]. 114 1e-25

Locus	Definition	Score	E value
LOC612910	PREDICTED: similar to Brain mitochondrial carrier protein-1 (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5) (Solute carrier family 25, member 14) isoform 5 [Canis familiaris].	355	4e-98
LOC609084	PREDICTED: similar to solute carrier family 25, member 30 [Canis familiaris].	271	9e-73
UCP1	mitochondrial brown fat uncoupling protein 1 [Canis lupus familiaris].	114	1e-25

BLAST on RefSeq (Cattle): TOP

Locus Definition Score E value FL
SLC25A14 brain mitochondrial carrier protein 1 [Bos taurus]. 352 3e-97

SLC25A30 kidney mitochondrial carrier protein 1 [Bos taurus]. 292 4e-79

LOC100335246 PREDICTED: solute carrier family 25 (mitochondrial carrier, brain), member 14-like [Bos taurus]. 262 4e-70

LOC784274 PREDICTED: solute carrier family 25, member 30-like [Bos taurus]. 213 3e-55

SLC25A11 mitochondrial 2-oxoglutarate/malate carrier protein [Bos taurus]. 127 2e-29

Locus	Definition	Score	E value
SLC25A14	brain mitochondrial carrier protein 1 [Bos taurus].	352	3e-97
SLC25A30	kidney mitochondrial carrier protein 1 [Bos taurus].	292	4e-79
LOC100335246	PREDICTED: solute carrier family 25 (mitochondrial carrier, brain), member 14-like [Bos taurus].	262	4e-70
LOC784274	PREDICTED: solute carrier family 25, member 30-like [Bos taurus].	213	3e-55
SLC25A11	mitochondrial 2-oxoglutarate/malate carrier protein [Bos taurus].	127	2e-29

BLAST on RefSeq (Pig): TOP

Locus Definition Score E value FL
LOC100525444 PREDICTED: brain mitochondrial carrier protein 1-like isoform 2 [Sus scrofa]. 356 1e-98

LOC100626714 PREDICTED: brain mitochondrial carrier protein 1-like [Sus scrofa]. 304 6e-83

UCP3 mitochondrial uncoupling protein 3 [Sus scrofa]. 137 1e-32

SLC25A35 solute carrier family 25, member 35 [Sus scrofa]. 77 2e-14

Locus	Definition	Score	E value
LOC100525444	PREDICTED: brain mitochondrial carrier protein 1-like isoform 2 [Sus scrofa].	356	1e-98
LOC100626714	PREDICTED: brain mitochondrial carrier protein 1-like [Sus scrofa].	304	6e-83
UCP3	mitochondrial uncoupling protein 3 [Sus scrofa].	137	1e-32
SLC25A35	solute carrier family 25, member 35 [Sus scrofa].	77	2e-14

Oligo-microarray probe: TOP

Probe ID Rel. Probe sequence
AGPOA4-10259 4.1 AGGCCAGGGCAGTTATTGTATGTTACAGACCTCGGTTCTCATTAAAAAGTATTTATTGGC

Probe ID	Rel.	Probe sequence
AGPOA4-10259	4.1	AGGCCAGGGCAGTTATTGTATGTTACAGACCTCGGTTCTCATTAAAAAGTATTTATTGGC

Assembly member: TOP

Release Contig/Singlet Clones Direction

20101001 20101001C-002148 3 fwd
20110601 20110601C-007240 4 fwd