[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20030531C-003564
Length:
917
Sequence:
[FASTA format sequence]
AGGTGTTCCC GGGCGCGCCA AGATGCAGCC GAGGCTCTGG CTCCTCATTG CCGCGCAGCT
GTCAACTCTC CACGGTGGCT CAGCACTCCT GCAGACTCCT TCGTCTGTGA TGGCTCAAAC
CAACCAGATG GTGAAGCTGT CCTGTGAAGC CAGAACTTTC CCCACCAACA CTCGCATCTA
CTGGCTGAGG CTGCGTCAGG CCCCAAGTGC CAACAGCCAC TACGAGTTCC TGGCCCTCTG
GATTCCTAAC GGAAACCCTG TGTATGGCAA GGAGACGGAG AAGCAGCTAA CTGTGCTTCA
AGATTCTTCC CGCTACCTTC TCCAACTCCG ACACGTGAAG CCTGCGGACA GTGGCAACTA
CTTCTGCATG GCTGTTGGCA ACCCCGAGCT GACCTTTGGG AAGGGAACTC GGCTGAGTGT
GGTTGATGTC TTTCCCACCA CTGCCCAGCC CACCAAGAAG ACCAGACCCA AGAAGAAAAT
ATGCCGATTA CCAAACCTGG TGCCCCCAAA GGGCCCTGCC TGTGCCCCCC TCATCATTGG
CCTGCTGGTG GCCGGCCTTC TGGTTCTGCT GGTGTCCTTG GGTGCTGCTG TCCATGTATA
CTGCCTGCAG AGGAGAGCCT GGCATCGCCT CATGAAACAG TTTTGTAAGT GAGCAGAGAA
TATGCTTTTG GTGTCCTGCT ACAAAAATAC ATCGGTCACT GATGGACAAG GTCTGGAAAA
ATGAGAGCGA AAGGACACAC TCAACCATGG ACATGTCACC AACCTGCCAA AGCTGCCTGC
TTTTAACTAC TGCAAGTTCT TTCTGTGGAC CTCATGCCTG AGAGCAACTT GTTACATAGT
CATCAGGAAT CTGAGAGAGA AGCCTTCAGA GCCCCAGGGC CCTCTCTGCA ACTCGAAAGG
CATATGCAGG ATTGAGT
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | CD8B | CD8 antigen beta polypeptide 1 isoform 5 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 230 | 1e-60 | O |
|
|
| CD8B | CD8 antigen beta polypeptide 1 isoform 2 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 226 | 1e-59 | O |
|
|
| CD8B | CD8 antigen beta polypeptide 1 isoform 3 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 226 | 1e-59 | O |
|
|
| CD8B | CD8 antigen beta polypeptide 1 isoform 1 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 226 | 1e-59 | O |
|
|
| CD8B | CD8 antigen beta polypeptide 1 isoform 4 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 207 | 6e-54 | O |
|
|
| CD8 antigen beta polypeptide 1 isoform 6 precursor; T-cell surface glycoprotein CD8 beta chain; antigen CD8B | 207 | 6e-54 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Cd8b1 | CD8 antigen, beta chain | 163 | 1e-40 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens CD8 antigen, beta polypeptide 1 (p37) (CD8B1), transcript variant 1, mRNA | 141 | 6e-32 | O |
|
|
| YGK602699560.R1 CSEQFL16 thymus Bos taurus cDNA, mRNA sequence | 113 | 1e-23 | |
|
|
| Mus musculus CD8 antigen, beta chain (Cd8b), mRNA | 40.1 | 0.18 | |
|
|
| Mus musculus, Similar to KIAA0140 gene product, clone MGC:40647 IMAGE:5400742, mRNA, complete cds | 40.1 | 0.18 | |
|
|
| Mus musculus solute carrier family 4 (anion exchanger), member 8 (Slc4a8), mRNA | 40.1 | 0.18 | |
|
|
| BB364251 RIKEN full-length enriched, 16 days embryo head Mus musculus cDNA clone C130020N06 3'. | 38.2 | 0.70 | |
|
|
| Homo sapiens bruno-like 5, RNA binding protein (Drosophila) (BRUNOL5), mRNA | 38.2 | 0.70 | |
|
|
| Homo sapiens mRNA for KIAA1526 protein, partial cds. | 38.2 | 0.70 | |
|
|
| Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (NFKBIA), mRNA | 38.2 | 0.70 | |
|
|
| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330023L17 product:unclassifiable, full insert sequence. | 38.2 | 0.70 |
|
|
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20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
THY01_0120_G02.b.scf : agtgtcaaaaacaxxxxxxxxxxx
THY01_0035_E05.b.ab1 : ggggaacctatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0108_A08.b.scf : nttgtcaaaacaxxxxxxxxxx
THY01_0124_C07.b.scf : agtgtcaaaaacagctggt
THY01_0042_F09.b.ab1 : gggggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20030531C-003564 : ..............................AGGTGTTCCCGGGCGCGCCAAGATGCAGCC
---------+---------+---------+---------+---------+---------+ 30
THY01_0120_G02.b.scf : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGTG*TCCCGGGCGC*CCAAGATGCAGCC
THY01_0035_E05.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGGTGTTCCCGGGCGCGCCAAGATGCAGCC
THY01_0108_A08.b.scf : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtcCCCGGGCGCGCCAAGATGCAGCC
THY01_0124_C07.b.scf : acggtcggaattctcagcatgttggctatggaggtgtccccgggcgccccaagatgcagc
THY01_0042_F09.b.ab1 : xxxxxxxxxxxxxxxxxxxxxatcgggaccaggtgttcccgggcgcgccaagatgcagcc
20030531C-003564 : GAGGCTCTGGCTCCTCATTGCCGCGCAGCTGTCAACTCTCCACGGTGGCTCAGCACTCCT
---------+---------+---------+---------+---------+---------+ 90
THY01_0120_G02.b.scf : GAGGCTCTGGCTCCTCATTGCCGCGCAGCTGTCAACTCTCCACGGTGGCTCAGCACTCCT
THY01_0035_E05.b.ab1 : GAGGCTCTGGCTCCTCATTGCCGCGCAGCTGTCAACTCTCCACGGTGGCTCAGCACTCCT
THY01_0108_A08.b.scf : GAGGCTCTGGCTCCTCATTGCCGCGCAGCTGTCAACTCTCCACGGTGGCTCAGCACTCCT
THY01_0124_C07.b.scf : cgaggtctggctcctcattgccgcgcagctgtcaaCTCTCCACGGTGGCTCAGCACTCCT
THY01_0042_F09.b.ab1 : gaggctctggctcctcattgccgcgcagctgtcaaCTCTCCACGGTGGCTCAGCACTCCT
20030531C-003564 : GCAGACTCCTTCGTCTGTGATGGCTCAAACCAACCAGATGGTGAAGCTGTCCTGTGAAGC
---------+---------+---------+---------+---------+---------+ 150
THY01_0120_G02.b.scf : GCAGACTCCTTCGTCTGTGATGGCTCAAACCAACCAGATGGTGAAGCTGTCCTGTGAAGC
THY01_0035_E05.b.ab1 : GCAGACTCCTTCGTCTGTGATGGCTCAAACCAACCAGACGGTGAAGCTGTCCTGTGAAGC
THY01_0108_A08.b.scf : GCAGACTCCTTCGTCTGTGATGGCTCAAACCAACCAGATGGTGAAGCTGTCCTGTGAAGC
THY01_0124_C07.b.scf : GCAGACTCCTTCGTCTGTGATGGGTCAAACCAACCAGATGGTGAAGCTGTCCTGTGAAGC
THY01_0042_F09.b.ab1 : GCAGACTCCTTCGTCTGTGATGGCTCAAACCAACCAGACGGTGAAGCTGTCCTGTGAAGC
20030531C-003564 : CAGAACTTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCAAGTGC
---------+---------+---------+---------+---------+---------+ 210
THY01_0120_G02.b.scf : CAGAACTTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCAAGTGC
THY01_0035_E05.b.ab1 : CAGAACTTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCGAGTGC
THY01_0108_A08.b.scf : CAGAACTTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCAAGTGC
THY01_0124_C07.b.scf : CAGAAATTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCAAGTGC
THY01_0042_F09.b.ab1 : CAGAACTTTCCCCACCAACACTCGCATCTACTGGCTGAGGCTGCGTCAGGCCCCGAGTGC
20030531C-003564 : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
---------+---------+---------+---------+---------+---------+ 270
THY01_0120_G02.b.scf : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
THY01_0035_E05.b.ab1 : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
THY01_0108_A08.b.scf : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
THY01_0124_C07.b.scf : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
THY01_0042_F09.b.ab1 : CAACAGCCACTACGAGTTCCTGGCCCTCTGGATTCCTAACGGAAACCCTGTGTATGGCAA
20030531C-003564 : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
---------+---------+---------+---------+---------+---------+ 330
THY01_0120_G02.b.scf : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
THY01_0035_E05.b.ab1 : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
THY01_0108_A08.b.scf : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
THY01_0124_C07.b.scf : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
THY01_0042_F09.b.ab1 : GGAGACGGAGAAGCAGCTAACTGTGCTTCAAGATTCTTCCCGCTACCTTCTCCAACTCCG
20030531C-003564 : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
---------+---------+---------+---------+---------+---------+ 390
THY01_0120_G02.b.scf : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
THY01_0035_E05.b.ab1 : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
THY01_0108_A08.b.scf : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
THY01_0124_C07.b.scf : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
THY01_0042_F09.b.ab1 : ACACGTGAAGCCTGCGGACAGTGGCAACTACTTCTGCATGGCTGTTGGCAACCCCGAGCT
20030531C-003564 : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
---------+---------+---------+---------+---------+---------+ 450
THY01_0120_G02.b.scf : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
THY01_0035_E05.b.ab1 : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
THY01_0108_A08.b.scf : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
THY01_0124_C07.b.scf : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
THY01_0042_F09.b.ab1 : GACCTTTGGGAAGGGAACTCGGCTGAGTGTGGTTGATGTCTTTCCCACCACTGCCCAGCC
20030531C-003564 : CACCAAGAAGACCAGACCCAAGAAGAAAATATGCCGATTACCAAACCTGGTGCCCCCAAA
---------+---------+---------+---------+---------+---------+ 510
THY01_0120_G02.b.scf : CACCAAGAAGAACAGACCCAAGAAGAAAATATGCCGATTACCAAACCTGGTGCCCCCAAA
THY01_0035_E05.b.ab1 : CACCAAGAAGACCAGACCCAAGAAGAAAATATGCCGATTACCAAACCTGGTGCCCCCAAA
THY01_0108_A08.b.scf : CACCAAGAAGACCAGACCCAAGAAGAAAATATGCCGATTACCAAACCTGGTGCCCCCAAA
THY01_0124_C07.b.scf : CACCAAGAAGACCACACCCAAGAAAAAAATATGCCCATTACCAAACCTGGTGCCCCCAAA
THY01_0042_F09.b.ab1 : CACCAAGAAGACCAGACCCAAGAAGAAAATATGCCGATTACCAAACCTGGTGCCCCCAAA
20030531C-003564 : GGGCCCTGCCTGTGCCCCCCTCATCATTGGCCTGCTGGTGGCCGGCCTTCTGGTTCTGCT
---------+---------+---------+---------+---------+---------+ 570
THY01_0120_G02.b.scf : GGGCCCTGCCTGTGCCCCCCTCATCATTGGCCTGCTGGTGGCTGGCCTCCTGTTTCTGCT
THY01_0035_E05.b.ab1 : GGGCCCTGCCTGTGCCCCCCTCATCATTGGCCTGCTGGTGGCCGGCCTTCTGGTTCTGCT
THY01_0108_A08.b.scf : GGGCCCTGCCTGTGCCCCCCTCATCATTGGCCTGCTGGTGGCTGGCCTCCTGGTTCTGCT
THY01_0124_C07.b.scf : GGCCCCT*CCCGTGCCCCCC*CATCATTTGCCTGCTGGTGGC*TGCCTCCTGGNTCTGCT
THY01_0042_F09.b.ab1 : GGGCCCTGCCTGTGCCCCCCTCATCATTGGCCTGCTGGTGGCCGGCCTTCTAGTTCTGCT
20030531C-003564 : GGTGTCCTTGGGTGCTGCTGTCCATGTATACTGCCTGCAGAGGAGAGCCTGGCATCGCCT
---------+---------+---------+---------+---------+---------+ 630
THY01_0120_G02.b.scf : GGTGTTCTTGGGTtgaactgtcatgtttaactgctgcgaagaaaacctggcgttccctat
THY01_0035_E05.b.ab1 : GGTGTCCTTGGGTGCTGCTGTCCATGTATACTGCCTGCAGAGGAGAGCCTGGCATCGCCT
THY01_0108_A08.b.scf : GGTGTTCTTGGGTGCAGCTGTCCATGTATACTGC
THY01_0124_C07.b.scf : GGTGTCCT*GGGTGCAGCTGTCa
THY01_0042_F09.b.ab1 : GGTGTCCTTGGGTGCTGCTGTCCATGTATACTGCCTGCAGAGGAGAGCCTGGCATCGCCT
20030531C-003564 : CATGAAACAGTTTTGTAAGTG*AGCAGAGAATATGCTTTT*GGTGTCCTGCTACAAAAAT
---------+---------+---------+---------+---------+---------+ 688
THY01_0120_G02.b.scf : aaaaagtttgtaagta
THY01_0035_E05.b.ab1 : CATGAAACAGTTTTGTAAGTG*AGCAGAGAATATGCTTTT*GGTGTCCTGCTACAAAAAT
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : CATGAAAAAGTTTTGTAAGTGGACCAGAAAATATGCTTTTTGGGGTCCTGCTACAAAAAT
20030531C-003564 : ACAT*CGGTCACTGATGGACAAGGTCTGGAAAAA*TGAGAGCGAAAGGACACAC*TCAAC
---------+---------+---------+---------+---------+---------+ 745
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : ACAT*CGGTCACTGATGGACAAGGTCTGGAAAAA*TGAGAGCGAAAGGACACAC*TCAAC
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : ACATTCGGTCACTGATGGACAAGGTCTGGAAAAAATGAAAGCGAAAGGAAACACTTCAAC
20030531C-003564 : CAT*GGACATGTCACCAACCTGCCAAAGCT*GCCTGCTTTTAACTACTGCAAGTTCTTTC
---------+---------+---------+---------+---------+---------+ 803
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : CAT*GGACATGTCACCAACCTGCCAAAGCT*GCCTGCTTTTAACTACTGCAAGTTCTTTC
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : CATTGGAAAGGTCACCAACCTGCCAAAGCTTGCCTGCTTTTTACAACTGCAAGTTCTTTC
20030531C-003564 : TGTGGACCTCATGCCTGAGAGCAACTTGTTACATAGTCATCAGGAATCTGAGAGAGAAGC
---------+---------+---------+---------+---------+---------+ 863
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : TGTGGACCTCATGCCTGAGAGCAACTTGTTACATAGTCATCAGGAATCTGAGAGAGAAGC
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : TGGGGACCctctggcctgaaacaaatttgttaattaatacccaggaaatttgaaaaaaaa
20030531C-003564 : CTTCAGAGCCCCAGGGCCCTCTCTGCAACTCGAAAGGCATATGCAGGATTGAGT......
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : CTTCAGAGCCCCAGGGCCCTCTCTGCAACTCGAAAGGCATATGCAGGATTGAGTacaaaa
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : aaaccttcaaaaaccccagggcccccctcctccaacttcaaaaagggaatttccaggaat
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : tggctccagtgcagcacttccagctcctgtttggggctgggagtttcagtcttgcggtcc
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : tgaaaaaaaaaaaagggctcccgaggcaaccctttccccccccccctgttttggggggtg
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : agcccacgcccttgctttgtcctgggtagggcggggaacttgaaaacctgaatctctcat
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : gaaaatttaaaatcttttggcggtccaaaccaccccccctttgtttttttctcccgggga
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : gggaatggtgcttgggatgggtccccccttggtcttccccgtggctgggaagttggccct
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : gagggggggggaccaaatataaaaaatacaaaactacccttccgcgggaaaggggggggc
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : ttccccccaaaaaaaaaacccccaagggcaaacaaaaaaaccccaagggtttggggaaaa
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : gtgggggaagggggctccccccccttggctgcctctcccccccccgggtggggggaaagg
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 : aaggaaaagggcttttttcccaaaagaaaaggggggcccccttggtagaaac
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : agatgttctccccctctctcccccccccccacaaaaacaaaaaaacaaccccccgccccc
20030531C-003564 : ............................................................
---------+---------+---------+---------+---------+---------+ 917
THY01_0120_G02.b.scf :
THY01_0035_E05.b.ab1 :
THY01_0108_A08.b.scf :
THY01_0124_C07.b.scf :
THY01_0042_F09.b.ab1 : acagaacacagacaaaaacacaataa
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