[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20030826C-001381
Length:
1,308
Sequence:
[FASTA format sequence]
AGACGCTGTC CTCGCGGCGC CGCCGGCCGG CCGGAGCCTC CTCCACCGAG GGGACCCCGC
AACCGCGGCG CCCGGGTGGC AGCGATCCCG CCACAGCCTC CCCGAGGGCC CGTCCGGAGC
CGGGGCGGGG CGGGGCGCCC TCCGCAACCA CGTGTGCCCG CCTCGCAGCG CTGCGCGCCC
GCCGCCTTTC CCGGGCTCGC CCGCGGCCCG GCCGGAGCGC CTCGCCGGAG GTTTGTCCCC
GCTCGCTCGC CGTAGCGCGC GGCCCCGCGG AGCGCAGGGC GCGCGGCCGA CATGGGCGAG
ACCATATCCC GGAGGCTCTG GTTCCAGGGG GACTGGGACG CGGAAATGGA GGAGCGGGCG
TTCCCCAACC CTTTCCCGGA CTACGAGGCC GCGGCCGCCG TGCCGGCGGA GGAGCCGCCA
TGTGCTCGCC CTGCGCTCAC CCCGGAGGAG CTCGGCCTCC CTTTCCACAG CGACGGGAAG
ATCATTCATA ATTTCACAAG GCGGATCCAG AGCAAAATCA AAGATCTTCT ACAGCAGATG
GAAGAAGGGC TGAAGACAGC TGATCCGCAC GATTGCTCTG CTTACACGGG TTGGACAGGC
ATAGCCCTTT TGTACCTTCA GTTGTACCGG GTCACATGTG ACCAGAACTA TCTGCTCCGA
TCCCTGGATT ACGTAAAAAG AACACTTCGG AATCTGAACG GCCGGAGGGT CACTTTCCTC
TGTGGAGATG CCGGGCCCCT GGCCGTCGGA GCTGTGGTGT ATCACAAACT CAAAAGTGAT
GGCGAGTCCC AGGAATGCAT CACAAAACTC CTGCAGCTCC AGAGAACCAT CGTCTGCCGC
GACTCGGACC TTCCCGATGA GCTGCTTTTC GGCCGCGCGG GCTACCTGTA CGCCTTGCTC
TATGTGAACA CGGAGATGGA TCCGGGCGCC GTGTGCGAAT CAGCCATCAA AGAGGTGGTC
GATGCTATTA TTGTTTCGGG CAAGACTTTG TCAAAGGAAG AAAGGAAGGC CGAGCGCTGC
CCCCTGTTGT ACCAGTGGCA CAGGAAGCAG TACGTCGGAG CCGCCCATGG CATGGCTGGG
ATCTACTACA TGCTAATGCA GCCAGCAGCA AAAGTGGACC AAGAAACCTT GACAGAGATG
GTGAAGCCTA GTATTGACTA CATGCGCCAC AAAAGGTTCC GATCCCGGAA CTACCCATCC
TCGTTAAGCA ACGAGACAGA CCGCCTGGTA CACTGGTTGC ACGGGGCGCC CGGCGTCATC
CACACGCTCA TGCAGGCGTA CAAGGTGGTT AAGGAGGAGA AGTACCTG
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | LANCL2 | LanC lantibiotic synthetase component C-like 2; testis-specific adriamycin sensitivity protein; LanC (bacterial lantibiotic synthetase component C)-like 2; G protein-coupled receptor 69B | 572 | e-163 | O |
|
|
| LANCL1 | lanthionine synthetase C-like protein 1; G protein-coupled receptor 69A; LanC (bacterial lantibiotic synthetase component C)-like 1; LanC (bacterial lantibiotic synthetase component) | 305 | 3e-83 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Lancl2 | RIKEN cDNA 1700003F10 | 544 | e-155 | O |
|
|
| Lancl1 | LanC (bacterial lantibiotic synthetase component C)-like; G protein-coupled receptor 69; G protein-coupled receptor 69A; LanC-like protein 1 | 310 | 8e-85 | O |
|
|
| Lancl3 | RIKEN cDNA 6030463G20 | 105 | 3e-23 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens LanC lantibiotic synthetase component C-like 2 (bacterial) (LANCL2), mRNA | 785 | 0.0 | O |
|
|
| Mus musculus RIKEN cDNA 1700003F10 gene (1700003F10Rik), mRNA | 414 | e-114 | O |
|
|
| 813122 MARC 3PIG Sus scrofa cDNA 5', mRNA sequence | 240 | 1e-61 | |
|
|
| Mus musculus neurofibromatosis 2 (Nf2), mRNA | 44.1 | 0.017 | |
|
|
| Mus musculus trans-acting transcription factor 5 (Sp5), mRNA | 40.1 | 0.27 | |
|
|
| Homo sapiens cDNA FLJ13839 fis, clone THYRO1000777. | 38.2 | 1.1 | |
|
|
| AGENCOURT_7896881 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:6159921 5', mRNA sequence | 38.2 | 1.1 | |
|
|
| Homo sapiens ubiquitin-conjugating enzyme E2L 6 (UBE2L6), mRNA | 38.2 | 1.1 | |
|
|
| Homo sapiens scotin (SCOTIN), mRNA | 38.2 | 1.1 | |
|
|
| Homo sapiens TEA domain family member 3 (TEAD3), mRNA | 38.2 | 1.1 |
|
20030826C-001381 : ...........................................................A
---------+---------+---------+---------+---------+---------+ 1
OVRM1_0055_H01.b.ab1 : cgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxA
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : GACGCTGTCCTCGCGGCGCCGCCGGCCGGCCGGAGCCTCCTCCACCGAGGGGACCCCGCA
---------+---------+---------+---------+---------+---------+ 61
OVRM1_0055_H01.b.ab1 : GACGCTGTCCTcgcggcgccgccggccggccggAGCCTCCTCCACCGAGGGGACCCCGCA
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : ACCGCGGCGCCCGGGTGGCAGCGATCCCGCCACAGCCTCCCCGAGGGCCCGTCCGGAGCC
---------+---------+---------+---------+---------+---------+ 121
OVRM1_0055_H01.b.ab1 : ACCGCGGCGCCCGGGTGGCAGCGATCCCGCCACAGCCTCCCCGAGGGCCCGTCCGGAgcc
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : GGGGCGGGGCGGGGCGCCCTCCGCAACCACGTGTGCCCGCCTCGCAGCGCTGCGCGCCCG
---------+---------+---------+---------+---------+---------+ 181
OVRM1_0055_H01.b.ab1 : ggggcggggcggggcgcccTCCGCAACCACGTGTGCCCGCCTCGCAGCGCTGCGCGCCCG
OVRM1_0054_H06.b.ab1 : cgttgacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : CCGCCTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
---------+---------+---------+---------+---------+---------+ 241
OVRM1_0055_H01.b.ab1 : CCGCCTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
OVRM1_0054_H06.b.ab1 : xxxttTTTCCCGGGCTCGCCCGCGGCCCGGCCGGAGCGCCTCGCCGGAGGTTTGTCCCCG
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : CTCGCTCGCCGTAGCGCGCGGCCCCGCGGAGCGCAGGGCGCGCGGCCGACATGGGCGAGA
---------+---------+---------+---------+---------+---------+ 301
OVRM1_0055_H01.b.ab1 : CTCGCTCGCCGTAgcgcgcggccccgcggagcgcagggcgcgcggccgACATGGGCGAGA
OVRM1_0054_H06.b.ab1 : CTCGCTCGCCGTAgcgcgcggccccgcggagcgcagggcgcgcggccgACATGGGCGAGA
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 :
20030826C-001381 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAGGAGCGGGCGT
---------+---------+---------+---------+---------+---------+ 361
OVRM1_0055_H01.b.ab1 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAAGAGCGGGCGT
OVRM1_0054_H06.b.ab1 : CCATATCCCGGAGGCTCTGGTTCCAGGGGGACTGGGACGCGGAAATGGAGGAGCGGGCGT
LVRM1_0082_A07.b.ab1 : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0001_F07.b.ab1 :
20030826C-001381 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
---------+---------+---------+---------+---------+---------+ 421
OVRM1_0055_H01.b.ab1 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
OVRM1_0054_H06.b.ab1 : TCCCCAACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
LVRM1_0082_A07.b.ab1 : xxxxxxACCCTTTCCCGGACTACGAGGCCGCGGCCGCCGTGCCGGCGGAGGAGCCGCCAT
THY01_0001_F07.b.ab1 :
20030826C-001381 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGCCTCCCTTTCCACAGCGACGGGAAGA
---------+---------+---------+---------+---------+---------+ 481
OVRM1_0055_H01.b.ab1 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGTCTCCCTTTCCACAGCGACGGGAAGA
OVRM1_0054_H06.b.ab1 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGCCTCCCTTTCCACAGCGACGGGAAGA
LVRM1_0082_A07.b.ab1 : GTGCTCGCCCTGCGCTCACCCCGGAGGAGCTCGGCCTCCCTTTCCACAGCGACGGGAAGA
THY01_0001_F07.b.ab1 : gccxxxxxxxx
20030826C-001381 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTTCTACAGCAGATGG
---------+---------+---------+---------+---------+---------+ 541
OVRM1_0055_H01.b.ab1 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTACTACAGCAGATGG
OVRM1_0054_H06.b.ab1 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTTCTACAGCAGATGG
LVRM1_0082_A07.b.ab1 : TCATTCATAATTTCACAAGGCGGATCCAGAGCAAAATCAAAGATCTTCTACAGCAGATGG
THY01_0001_F07.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAAAGATCTTCTACAGCAGATGG
20030826C-001381 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
---------+---------+---------+---------+---------+---------+ 601
OVRM1_0055_H01.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
OVRM1_0054_H06.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
LVRM1_0082_A07.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
THY01_0001_F07.b.ab1 : AAGAAGGGCTGAAGACAGCTGATCCGCACGATTGCTCTGCTTACACGGGTTGGACAGGCA
20030826C-001381 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
---------+---------+---------+---------+---------+---------+ 660
OVRM1_0055_H01.b.ab1 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
OVRM1_0054_H06.b.ab1 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
LVRM1_0082_A07.b.ab1 : TAGCCC*TTTTGTACCTTCAGTTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
THY01_0001_F07.b.ab1 : TAGCCCTTTTTGTACCTTCAATTGTACCGGGTCACATGTGACCAGAACTATCTGCTCCGA
20030826C-001381 : TCCCTGGATTACGTAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
---------+---------+---------+---------+---------+---------+ 720
OVRM1_0055_H01.b.ab1 : TCCCTGGATTACGTAA*AAGAACACTTCGGGATCTGAACGGCCGGAGGGTCcttttctct
OVRM1_0054_H06.b.ab1 : TCCCTGGATTACGCAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
LVRM1_0082_A07.b.ab1 : TCCCTGGATTACGTAACAATAACACTTCCGAATCTGAACGGCCGGAGGGTCACTTTCCTC
THY01_0001_F07.b.ab1 : TCCCTGGATTACGTAAAAAGAACACTTCGGAATCTGAACGGCCGGAGGGTCACTTTCCTC
20030826C-001381 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
---------+---------+---------+---------+---------+---------+ 780
OVRM1_0055_H01.b.ab1 : gtggacatgccgggccctgggcgtcggactgtggtgtn
OVRM1_0054_H06.b.ab1 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
LVRM1_0082_A07.b.ab1 : TGTGGATATGCCGGGGCCCTGGTCGCCGGATCTGTGGTGgtgagaccacttaaaagtgcc
THY01_0001_F07.b.ab1 : TGTGGAGATGCCGGGCCCCTGGCCGTCGGAGCTGTGGTGTATCACAAACTCAAAAGTGAT
20030826C-001381 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
---------+---------+---------+---------+---------+---------+ 840
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
LVRM1_0082_A07.b.ab1 : cgccactctgtatgagtgccggtataagttcctgtacccgcggataaaccgctccttccc
THY01_0001_F07.b.ab1 : GGCGAGTCCCAGGAATGCATCACAAAACTCCTGCAGCTCCAGAGAACCATCGTCTGCCGC
20030826C-001381 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
---------+---------+---------+---------+---------+---------+ 900
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
LVRM1_0082_A07.b.ab1 : ccaccaggggacgccacagcgagtgacgggccctcccaacgaatacacggaaggggaggg
THY01_0001_F07.b.ab1 : GACTCGGACCTTCCCGATGAGCTGCTTTTCGGCCGCGCGGGCTACCTGTACGCCTTGCTC
20030826C-001381 : TATGTGAACACGGAGATGGATCCGGGCGCCGTGTGCGAATCAGCCATCAAAGAGGTGGTC
---------+---------+---------+---------+---------+---------+ 960
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 : TATGTGAACACGGAGATGGGTCCGGGCGCCGTGTGCGAATCACCCATCAAA
LVRM1_0082_A07.b.ab1 : gcagacgcgaaagcgacgtgcgactagaccagtgtacccgaaagaggagagataatgaga
THY01_0001_F07.b.ab1 : TATGTGAACACGGAGATGGATCCGGGCGCCGTGTGCGAATCAGCCATCAAAGAGGTGGTC
20030826C-001381 : GATGCTATTATTGTTTCGGGCAAGACTTTGTCAAAGGAAGAAAGGAAGGCCGAGCGCTGC
---------+---------+---------+---------+---------+---------+ 1020
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 : agcagcacggtacaaaggataccaagttctgacacagggaaggaaggaagtaagaaaggg
THY01_0001_F07.b.ab1 : GATGCTATTATTGTTTCGGGCAAGACTTTGTCAAAGGAAGAAAGGAAGGCCGAGCGCTGC
20030826C-001381 : CCCCTGTTGTACCAGTGGCACAGGAAGCAGTACGTCGGAGCCGCCCATGGCATGGCTGGG
---------+---------+---------+---------+---------+---------+ 1080
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 : caagtggtgcccgattgaaacgcaatgccctttgtctcccgaaccccattggaccctaga
THY01_0001_F07.b.ab1 : CCCCTGTTGTACCAGTGGCACAGGAAGCAGTACGTCGGAGCCGCCCATGGCATGGCTGGG
20030826C-001381 : ATCTACTACATGCTAATGCAGCCAGCAGCAAAAGTGGACCAAGAAACCTTGACAGAGATG
---------+---------+---------+---------+---------+---------+ 1140
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 : gtcagtaaagaaaggcgagaaggggacacaaaagaaacg
THY01_0001_F07.b.ab1 : ATCTACTACATGCTAATGCAGCCAGCAGCAAAAGTGGACCAAGAAACCTTGACAGAGATG
20030826C-001381 : GTGAAGCCTAGTATTGACTACATGCGCCACAAAAGGTTCCGATCCCGGAACTACCCATCC
---------+---------+---------+---------+---------+---------+ 1200
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 : GTGAAGCCTAGTATTGACTACATGCGCCACAAAAGGTTCCGATCCCGGAACTACCCATCC
20030826C-001381 : TCGTTAAGCAACGAGACAGACCGCCTGGTACACTGGTTGCACGGGGCGCCCGGCGTCATC
---------+---------+---------+---------+---------+---------+ 1260
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 : TCGTTAAGCAACGAGACAGACCGCCTGGTACACTGGTTGCACGGGGCGCCCGGCGTCATC
20030826C-001381 : CACACGCTCATGCAGGCGTACAAGGTGGTTAAGGAGGAGAAGTACCTG............
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 : CACACGCTCATGCAGGCGTACAAGGTGGTTAAGGAGGAGAAGTACCTGacggacgccgtg
20030826C-001381 : ............................................................
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 : gagtgcagcgacgtgattttgccagcgggccctgctggccatgggtacggcatctgccac
20030826C-001381 : ............................................................
---------+---------+---------+---------+---------+---------+ 1308
OVRM1_0055_H01.b.ab1 :
OVRM1_0054_H06.b.ab1 :
LVRM1_0082_A07.b.ab1 :
THY01_0001_F07.b.ab1 : ggaatgcgggcaacggttactcctct
TOP
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