[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20040204C-002151
Length:
912
Sequence:
[FASTA format sequence]
AGCAGCGTCA TGGCGCGCTT CTTCCGCGCG GGCCCGGGCT TACCCTTCCG AGAGGTGCTC
TCGCGGGCAG TGTGGGGTCG TGCCGACAAT GGCGGCCTCA GCCCGAAGGT CGGAACCGGA
GACGCAGGGT CCCTTACAAA GCGTGAGCCG TTCCTCTCCA AGAGTGAGTG GCAAAAGAAG
CTGACTCCAG AGCAATTCCA CGTCACGAGA GAAAAAGGGA CAGAACCGCC TTTCAGTGGG
ACCTACCTGA ATAACAAGGA AGCAGGAATG TATCACTGTG TGTGCTGTGA CAGCCCACTC
TTCAGCTCTG AGAAAAAGTA CTGCTCTGGC ACTGGATGGC CTTCATTTTC TGAGGCTCAC
GGCACATCTG GCTCTGATGA GAGTGACACA GGGATCCTGA GACGTGTGGA CACCTCGCTG
GGAACAGCTC GCACGGAGGT TGTCTGCAAG CAGTGCGAAG CTCACCTTGG CCATGTGTTT
CCTGATGGAC CTGGGCCTAC AGGTCAGAGG TTTTGCATCA ACAGTGTGGC ACTCAAGTTC
AAACCAAGGA AACACTGACC ATCGCCAGGA GTCCCTTTCT CTTCCACCCT CTCATTTCCA
AACTCGATTT TCATAATTTA TGCAAATGAC TAGTTTTATT AATGACCAAA CTAGGCTAAG
CTTGCTGGCA TACCTTCTCT AATTCATTAC CTGGAGTCAG CTCCACCCTG GCTCTGGCTC
TGGCTAGAAT TTCACGGAAT GACAGAGGGG CAGTCCTTTC CCTTAATCAA CATCTGTGGG
CTTTGCCAGG ACCAGAGGGC ATGACTCTTT GGGGACATTA GGAGGCTGAT GGATAAGCCA
AAGAACTCCT ATAAAACTAT GCTGAATTTT CCATTGCAGT CAAGTGGTTC ACAGACATGT
ATAGGTGAGA GG
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | MSRB2 | methionine sulfoxide reductase B | 294 | 6e-80 | |
|
|
| MSRB3 | hypothetical protein LOC253827 | 144 | 6e-35 | O |
|
|
| SEPX1 | selenoprotein X, 1 | 51.6 | 7e-07 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Msrb2 | methionine sulfoxide reductase B | 273 | 8e-74 | O |
|
|
| Msrb3 | RIKEN cDNA D430026P16 gene | 141 | 5e-34 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | BP143916 full-length enriched swine cDNA library, adult ovary Sus scrofa cDNA clone OVR010027F12 5', mRNA sequence | 1524 | 0.0 | |
|
|
| Homo sapiens pilin-like transcription factor (PILB), mRNA | 480 | e-134 | |
|
|
| Mus musculus RIKEN cDNA 2310050L06 gene (2310050L06Rik), mRNA | 272 | 3e-71 | O |
|
|
| UNL-P-FN-cu-b-04-0-UNL.s1 UNL-P-FN Sus scrofa cDNA clone UNL-P-FN-cu-b-04-0-UNL 3', mRNA sequence | 248 | 4e-64 | |
|
|
| 481179 MARC 2BOV Bos taurus cDNA 5', mRNA sequence | 75.8 | 4e-12 | |
|
|
| Mus musculus RIKEN cDNA 2700064H14 gene (2700064H14Rik), mRNA | 40.1 | 0.20 | |
|
|
| B0207D02-5 NIA Mouse Embryonic Germ Cell cDNA Library (Long) Mus musculus cDNA clone NIA:B0207D02 IMAGE:30104101 5', mRNA sequence | 38.2 | 0.78 | |
|
|
| Mus musculus PAX interacting (with transcription-activation domain) protein 1 (Paxip1), mRNA | 38.2 | 0.78 | |
|
|
| uq21f09.x1 Ren Stubbs mouse thymus Mus musculus cDNA clone IMAGE:2803145 3'. | 38.2 | 0.78 | |
|
|
| BTU602600435.R1 CSEQFXL04 small intestine Bos taurus cDNA, mRNA sequence | 38.2 | 0.78 |
|
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVR01_0027_F12.b.ab1 : ggggcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TCH01_0043_A11.b.ab1 : tttttggctagtgacttnacagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
20040204C-002151 : ............................AGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
---------+---------+---------+---------+---------+---------+ 32
OVR01_0027_F12.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
TCH01_0043_A11.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxAGCAGCGTCATGGCGCGCTTCTTCCGCGCGGG
20040204C-002151 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
---------+---------+---------+---------+---------+---------+ 92
OVR01_0027_F12.b.ab1 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
TCH01_0043_A11.b.ab1 : CCCGGGCTTACCCTTCCGAGAGGTGCTCTCGCGGGCAGTGTGGGGTCGTGCCGACAATGG
20040204C-002151 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
---------+---------+---------+---------+---------+---------+ 152
OVR01_0027_F12.b.ab1 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
TCH01_0043_A11.b.ab1 : CGGCCTCAGCCCGAAGGTCGGAACCGGAGACGCAGGGTCCCTTACAAAGCGTGAGCCGTT
20040204C-002151 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCAATTCCACGTCACGAGAGA
---------+---------+---------+---------+---------+---------+ 212
OVR01_0027_F12.b.ab1 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCGATTCCACGTCACGAGAGA
TCH01_0043_A11.b.ab1 : CCTCTCCAAGAGTGAGTGGCAAAAGAAGCTGACTCCAGAGCAATTCCACGTCACGAGAGA
20040204C-002151 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
---------+---------+---------+---------+---------+---------+ 272
OVR01_0027_F12.b.ab1 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
TCH01_0043_A11.b.ab1 : AAAAGGGACAGAACCGCCTTTCAGTGGGACCTACCTGAATAACAAGGAAGCAGGAATGTA
20040204C-002151 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
---------+---------+---------+---------+---------+---------+ 332
OVR01_0027_F12.b.ab1 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
TCH01_0043_A11.b.ab1 : TCACTGTGTGTGCTGTGACAGCCCACTCTTCAGCTCTGAGAAAAAGTACTGCTCTGGCAC
20040204C-002151 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
---------+---------+---------+---------+---------+---------+ 392
OVR01_0027_F12.b.ab1 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
TCH01_0043_A11.b.ab1 : TGGATGGCCTTCATTTTCTGAGGCTCACGGCACATCTGGCTCTGATGAGAGTGACACAGG
20040204C-002151 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
---------+---------+---------+---------+---------+---------+ 452
OVR01_0027_F12.b.ab1 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
TCH01_0043_A11.b.ab1 : GATCCTGAGACGTGTGGACACCTCGCTGGGAACAGCTCGCACGGAGGTTGTCTGCAAGCA
20040204C-002151 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
---------+---------+---------+---------+---------+---------+ 512
OVR01_0027_F12.b.ab1 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
TCH01_0043_A11.b.ab1 : GTGCGAAGCTCACCTTGGCCATGTGTTTCCTGATGGACCTGGGCCTACAGGTCAGAGGTT
20040204C-002151 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
---------+---------+---------+---------+---------+---------+ 572
OVR01_0027_F12.b.ab1 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
TCH01_0043_A11.b.ab1 : TTGCATCAACAGTGTGGCACTCAAGTTCAAACCAAGGAAACACTGACCATCGCCAGGAGT
20040204C-002151 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
---------+---------+---------+---------+---------+---------+ 632
OVR01_0027_F12.b.ab1 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
TCH01_0043_A11.b.ab1 : CCCTTTCTCTTCCACCCTCTCATTTCCAAACTCGATTTTCATAATTTATGCAAATGACTA
20040204C-002151 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
---------+---------+---------+---------+---------+---------+ 692
OVR01_0027_F12.b.ab1 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
TCH01_0043_A11.b.ab1 : GTTTTATTAATGACCAAACTAGGCTAAGCTTGCTGGCATACCTTCTCTAATTCATTACCT
20040204C-002151 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGGCTAGAATTTCACGGAATGACAGAGGGGCA
---------+---------+---------+---------+---------+---------+ 752
OVR01_0027_F12.b.ab1 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGACTAGAATTTCACGGAATGACAGAGGGGCA
TCH01_0043_A11.b.ab1 : GGAGTCAGCTCCACCCTGGCTCTGGCTCTGGCTAGAATTTCACGGAATGACAGAGGGGCA
20040204C-002151 : GTCCTTTCCCTTAA*TCAACATCTGTGGGC*TTTGCC*AGGACCAGAGGGCATGACTC*T
---------+---------+---------+---------+---------+---------+ 808
OVR01_0027_F12.b.ab1 : GTCCTTTCCCTTAAATCAACATCTGTGGGCTTTTGCCCAGGACCAGAGGGCATGACTCTT
TCH01_0043_A11.b.ab1 : GTCCTTTCCCTTAA*TCAACATCTGTGGGC*TTTGCC*AGGACCAGAGGGCATGACTC*T
20040204C-002151 : TTGGGGACATTAGGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
---------+---------+---------+---------+---------+---------+ 868
OVR01_0027_F12.b.ab1 : TTGGGGACATTANGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
TCH01_0043_A11.b.ab1 : TTGGGGACATTAGGAGGCTGATGGATAAGCCAAAGAACTCCTATAAAACTATGCTGAATT
20040204C-002151 : TTCCATTGCAGTCAAGTGGTTCACAGACATGTATAGGTGAGAGG................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 : TTCCATTGCAgtcaagtgtttcacaaacttgtataggtgagaaggtcaaacgaaaagagg
TCH01_0043_A11.b.ab1 : TTCCATTGCAGTCAAGTGGTTCACAGACATGTATAGGTGAGAGGgtcaacgagaagaggg
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 : aatgaaaatacgggatgaagattatccacagtcccagtggtgaaaaaggcaattaaggag
TCH01_0043_A11.b.ab1 : atgaaaatacgggatgaggatgatccaccgtcccagtgtggaaaagcaataaggaggcag
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 : ggagggtttggggaccaaacttgcgttttgggggagggcccattgtggggggatcccccg
TCH01_0043_A11.b.ab1 : gtttgtggaccacctgcttttgggaaggccatggtggggatcccggggaagcaggaaatt
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 : gggaaatgccggggaaaattttttttccccaaaaac
TCH01_0043_A11.b.ab1 : tttccaaaacctttaacggtcttaaaattcaattccacctctctaccgcaactattttaa
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 :
TCH01_0043_A11.b.ab1 : ggggcgttgtaaaccttaggaaaagaaaacaagggctcaaaagttacctttaaaggtcaa
20040204C-002151 : ............................................................
---------+---------+---------+---------+---------+---------+ 912
OVR01_0027_F12.b.ab1 :
TCH01_0043_A11.b.ab1 : taaa
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