[Overview] [RefSeq] [UniGene] [Cluster & SNP] [Alignment]
Assembly Name: 20040204C-002677
Length:
840
Sequence:
[FASTA format sequence]
ACTCACTGCT CTTCTGCTCC CTGAAACTCA GCTGCCAGGG GAGCCGGGGC TGCCCTACGA
AGCCGTCCCC TCCATACTGG ACCCCTACAG GGAGCCACGT GTGCCCAGCG GGGGCACCGC
CCCAGCTGAT GCCCCAGAGG GGCCACCCAT CTCAAGAGGG GCTCCGGGTC CTGCCTGGCC
TCCTCATGGC ACATGAGCCA GAGCCTGAGG CTGATGGGTT ACTGGACCTC AGCTTCCTGA
CGGAGGAGGA ACAGGAAGCC ATTGCTGAGG TCCTGAAGCG AGATGCCCAC CTACGGCAGC
TGGAGGAGGG ACGGGTCAGA AAGCTCCGGG CATCACTGGA AGACCCTGGG CAGCTGAAGA
TCCTAACAGG GGACTGGTTC CAGGAAGCAC GCTCCCAGAG GCACCACCAC ACCCACCTGG
GTTCTGACCT AGTCCGAGCC TCCATCCGCA GAAAGAAGGG CTCCAGGGGA GACCAGGCTC
GGGGCAGCAA TGGGGAGGCT GAGGCTGCTG GGAAAGAGAC CGAAGAGGCG CTGGAGCCCA
GGCTCCCCAT AGACAAGGCC CCCCAAGAGA GTCTCAGCGA GGCTGAGGGA CCTGATTTCC
CCTCACCATA TGTCCCCACT AAGGCATCAG ATAATGAAGA GGAGCCCCCG GCCCAGGAAG
CGCCTGGGCC GGCGGACGTT CAGGTCCCAG CCGCGGAGGA GGCGGACCCG GAGCCAAAGC
CGCCGTCGGG GGCGGAGGAG GAGCCGCAAC CCAGGCCTGC TCAGACCCAG GAGGCGTCCG
AAATCCTGGG AGAATGGGGA GGAGGCCCCG GGGCCTGACC CCTCACTGGA CCGTATGCTC
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
 |
 | SYTL1 | NADPH oxidase-related, C2 domain-containing protein | 230 | 3e-66 | O |
|
|
| SYTL2 | synaptotagmin-like 2 | 90.1 | 2e-18 | O |
| Locus | Definition | Score | E value | FL | ||
|---|---|---|---|---|---|---|
|
|
| Sytl1 | synaptotagmin-like 1 | 229 | 3e-64 | O |
|
|
| Sytl2 | synaptotagmin-like 2 | 91.3 | 6e-19 | O |
|
|
| Exph5 | synaptotagmin-like homologue lacking C2 domains b | 50.4 | 1e-06 | O |
| Definition | Score | E value | FL | ||
|---|---|---|---|---|---|
 |
 | Homo sapiens NADPH oxidase-related, C2 domain-containing protein (JFC1), mRNA | 426 | e-118 | O |
|
|
| Mus musculus synaptotagmin-like 1 (Sytl1), mRNA | 315 | 2e-84 | O |
|
|
| Mus musculus SEC14-like 1 (S. cerevisiae) (Sec14l1), mRNA | 42.1 | 0.046 | |
|
|
| Homo sapiens interleukin 9 receptor (IL9R), transcript variant 2, mRNA | 40.1 | 0.18 | |
|
|
| EST381912 MAGE resequences, MAGK Homo sapiens cDNA, mRNA sequence | 40.1 | 0.18 | |
|
|
| Homo sapiens cDNA FLJ33753 fis, clone BRCAN2000383. | 40.1 | 0.18 | |
|
|
| Mus musculus cDNA sequence BC039632 (BC039632), mRNA | 40.1 | 0.18 | |
|
|
| Mus musculus hypothetical protein C630025L14 (C630025L14), mRNA | 40.1 | 0.18 | |
|
|
| Homo sapiens similar to interleukin 9 receptor (LOC374678), mRNA | 40.1 | 0.18 | |
|
|
| Homo sapiens cDNA FLJ43931 fis, clone TESTI4013667 | 40.1 | 0.18 |
|
20040204C-002677 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVR01_0048_B04.b.ab1 : gggggtttttttagcattggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0039_H04.b.ab1 : gagttgtcxxxxxxxxxxxxxxxxxx
20040204C-002677 : ................................ACTCACTGCTCTTCTGCTCCCTGAAACT
---------+---------+---------+---------+---------+---------+ 28
LVR01_0048_B04.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxACTCACTGCTCTTCTGCTCCCTGAAACT
LVRM1_0039_H04.b.ab1 : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxtACTGCTCTTCTGCTCCCTGAAACT
20040204C-002677 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
---------+---------+---------+---------+---------+---------+ 88
LVR01_0048_B04.b.ab1 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
LVRM1_0039_H04.b.ab1 : CAGCTGCCAGGGGAGCCGGGGCTGCCCTACGAAGCCGTCCCCTCCATACTGGACCCCTAC
20040204C-002677 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
---------+---------+---------+---------+---------+---------+ 148
LVR01_0048_B04.b.ab1 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
LVRM1_0039_H04.b.ab1 : AGGGAGCCACGTGTGCCCAGCGGGGGCACCGCCCCAGCTGATGCCCCAGAGGGGCCACCC
20040204C-002677 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
---------+---------+---------+---------+---------+---------+ 208
LVR01_0048_B04.b.ab1 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
LVRM1_0039_H04.b.ab1 : ATCTCAAGAGGGGCTCCGGGTCCTGCCTGGCCTCCTCATGGCACATGAGCCAGAGCCTGA
20040204C-002677 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
---------+---------+---------+---------+---------+---------+ 268
LVR01_0048_B04.b.ab1 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
LVRM1_0039_H04.b.ab1 : GGCTGATGGGTTACTGGACCTCAGCTTCCTGACGGAGGAGGAACAGGAAGCCATTGCTGA
20040204C-002677 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
---------+---------+---------+---------+---------+---------+ 328
LVR01_0048_B04.b.ab1 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
LVRM1_0039_H04.b.ab1 : GGTCCTGAAGCGAGATGCCCACCTACGGCAGCTGGAGGAGGGACGGGTCAGAAAGCTCCG
20040204C-002677 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
---------+---------+---------+---------+---------+---------+ 388
LVR01_0048_B04.b.ab1 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
LVRM1_0039_H04.b.ab1 : GGCATCACTGGAAGACCCTGGGCAGCTGAAGATCCTAACAGGGGACTGGTTCCAGGAAGC
20040204C-002677 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
---------+---------+---------+---------+---------+---------+ 448
LVR01_0048_B04.b.ab1 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
LVRM1_0039_H04.b.ab1 : ACGCTCCCAGAGGCACCACCACACCCACCTGGGTTCTGACCTAGTCCGAGCCTCCATCCG
20040204C-002677 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
---------+---------+---------+---------+---------+---------+ 508
LVR01_0048_B04.b.ab1 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
LVRM1_0039_H04.b.ab1 : CAGAAAGAAGGGCTCCAGGGGAGACCAGGCTCGGGGCAGCAATGGGGAGGCTGAGGCTGC
20040204C-002677 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
---------+---------+---------+---------+---------+---------+ 568
LVR01_0048_B04.b.ab1 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
LVRM1_0039_H04.b.ab1 : TGGGAAAGAGACCGAAGAGGCGCTGGAGCCCAGGCTCCCCATAGACAAGGCCCCCCAAGA
20040204C-002677 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
---------+---------+---------+---------+---------+---------+ 628
LVR01_0048_B04.b.ab1 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
LVRM1_0039_H04.b.ab1 : GAGTCTCAGCGAGGCTGAGGGACCTGATTTCCCCTCACCATATGTCCCCACTAAGGCATC
20040204C-002677 : AGATAATGAAGAGGAGCCCCCGGCCCAGGAAGCGCCTGGGCCGGCGGACGTTCAGGTCCC
---------+---------+---------+---------+---------+---------+ 688
LVR01_0048_B04.b.ab1 : AGATAATGAAGAGGAGCCCCCGGCCCAGGAAGCGCCTGGGCCGGCGGACGTTCAGGTCCC
LVRM1_0039_H04.b.ab1 : AGATAATGAAGAGGAGCCCCCGGCCCAGGTAGCGCCTGGGCCGGCGGACGTTCAAGTCCC
20040204C-002677 : AGCCGCGGAGGAGGCGGACCCGGAGCCAAAGCCGCCGTCGGGGGCGGAGGAGGAGCCGCA
---------+---------+---------+---------+---------+---------+ 748
LVR01_0048_B04.b.ab1 : AGCCGCGGAGGAGGCGGACCCGGAGCCAAAGCCGCCGTCGGGGGCGGAGGAGGAGCCGCA
LVRM1_0039_H04.b.ab1 : AGCCGCGGAGGAGGCGGACCCGGAGCC*AAGCCGCCGTCGGGGGCGGAG
20040204C-002677 : ACCCAGGCCTGCTCAGACCCAGGAGGCGTCCGAAATCCTGGGAGAATGGGGAGGAGGCCC
---------+---------+---------+---------+---------+---------+ 808
LVR01_0048_B04.b.ab1 : ACCCAGGCCTGCTCAGACCCAGGAGGCGTCCGAAATCCTGGGAGAATGGGGAGGAGGCCC
LVRM1_0039_H04.b.ab1 :
20040204C-002677 : CGGGGCCTGACCCCTCACTGGACCGTATGCTC............................
---------+---------+---------+---------+---------+---------+ 840
LVR01_0048_B04.b.ab1 : CGGGGCCTGACCCCTCACTGGACCGTATGCTCagcaccagctccctcatggtccagcctc
LVRM1_0039_H04.b.ab1 :
20040204C-002677 : ............................................................
---------+---------+---------+---------+---------+---------+ 840
LVR01_0048_B04.b.ab1 : aactcctccacgcttgagcggcagccagatgagccctgtcgggggaagcggaaggcggcg
LVRM1_0039_H04.b.ab1 :
20040204C-002677 : ............................................................
---------+---------+---------+---------+---------+---------+ 840
LVR01_0048_B04.b.ab1 : gcagtgcaggtgcgccgcctcccttgcacttcgccgctgccctacgagccctggcgcccg
LVRM1_0039_H04.b.ab1 :
20040204C-002677 : ............................................................
---------+---------+---------+---------+---------+---------+ 840
LVR01_0048_B04.b.ab1 : ccgaaccttcccggtgcccctgaatcccattgcccaggggcctggcccgccccccccccc
LVRM1_0039_H04.b.ab1 :
20040204C-002677 : ............................................................
---------+---------+---------+---------+---------+---------+ 840
LVR01_0048_B04.b.ab1 : cccccccccgccttcaaaaccc
LVRM1_0039_H04.b.ab1 :
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